Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2226
Parameters: 2 7 7 80 10 50 1000
Length:  24212

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1567--1605
20
1.9
21
89
5
62
2
12
5
79
1.00
8346--8385
15
2.6
16
88
4
55
42
2
2
52
1.28
9196--9276
28
3.1
27
77
18
82
53
0
0
46
1.00
9709--9782
29
2.5
29
82
6
87
39
2
2
55
1.28
9769--9811
23
1.9
23
90
4
70
53
2
0
44
1.13
9798--9859
13
5.1
12
80
9
54
56
0
0
43
0.99
9911--9960
22
2.2
23
86
13
68
58
0
2
40
1.10
11040--11475
238
1.9
229
81
7
538
28
11
18
41
1.85
12856--12924
32
2.2
30
82
5
75
46
1
5
46
1.35
13344--13436
46
2.0
46
97
0
177
21
30
24
23
1.99
15361--15471
57
1.9
59
88
3
172
47
5
10
36
1.61
16230--16271
19
2.2
20
86
4
59
0
35
0
64
0.94
16746--16797
19
2.7
19
96
0
95
30
11
15
42
1.82
18429--18454
13
2.0
13
100
0
52
30
15
15
38
1.88
18409--18473
33
2.0
33
87
6
96
27
13
16
41
1.87
20224--20783
279
2.0
279
100
0
1120
29
16
28
26
1.97
21289--21313
13
1.9
13
100
0
50
32
16
20
32
1.94

Tables:   1

The End!