Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2228
Parameters: 2 7 7 80 10 50 1000
Length:  21429

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--120
19
2.2
19
83
8
50
59
0
7
33
1.25
194--235
10
4.2
10
81
9
50
69
0
0
30
0.89
2099--2266
74
2.3
75
89
5
268
20
22
19
38
1.94
2226--2309
42
2.0
42
95
0
150
13
21
17
47
1.81
2279--2578
106
2.8
106
96
0
546
19
18
19
43
1.89
2562--2717
52
3.1
51
87
5
165
12
21
17
47
1.81
2614--2717
52
2.0
52
100
0
208
11
19
17
51
1.75
2616--2698
26
3.2
26
65
19
73
9
19
16
54
1.70
3443--3488
19
2.4
19
85
0
56
34
2
0
63
1.07
6002--6054
17
3.2
17
73
26
60
39
0
0
60
0.97
6735--6807
27
2.7
27
85
4
94
28
5
17
47
1.70
19019--19108
1
90.0
1
77
0
72
86
5
7
0
0.70
19018--19108
33
2.7
34
93
6
159
85
5
8
0
0.73

Tables:   1

The End!