Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2229
Parameters: 2 7 7 80 10 50 1000
Length:  12475

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3380--3433
28
2.0
28
85
3
74
44
0
1
53
1.11
3570--3612
17
2.4
18
84
7
52
55
0
0
44
0.99
5185--5261
22
3.4
21
71
16
57
63
10
3
22
1.42
5342--5390
11
4.2
12
76
12
57
0
22
2
75
0.90
5336--5385
24
2.2
23
83
13
68
0
16
2
82
0.77
5336--5385
10
4.6
10
81
13
55
0
16
2
82
0.77
6512--6548
14
2.5
15
80
20
51
54
0
0
45
1.00
6765--6799
18
1.9
18
88
0
52
57
20
2
20
1.54
6888--7009
11
10.4
11
74
17
95
61
0
0
36
1.08
6882--7003
33
3.6
36
72
21
120
61
0
0
36
1.08
6883--7049
29
5.8
29
70
24
88
61
1
0
35
1.11
6929--7020
49
1.9
46
82
10
114
58
1
1
39
1.12
7271--7326
25
2.4
24
82
11
71
64
1
0
33
1.04
7307--7339
14
2.2
16
89
10
52
63
0
0
36
0.95
7311--7363
22
2.3
23
78
18
58
58
0
0
41
0.98
8455--8543
27
3.4
25
81
9
97
24
7
21
46
1.78
11093--11138
21
2.1
22
84
4
58
30
19
30
19
1.97

Tables:   1

The End!