Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2232
Parameters: 2 7 7 80 10 50 1000
Length:  57594

Tables:   1   

This is table  1  of  1  ( 60 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1462--1488
4
6.8
4
100
0
54
25
0
22
51
1.48
2514--2562
22
2.3
23
86
10
68
38
0
4
57
1.18
3080--3121
16
2.6
16
82
10
50
30
2
0
66
1.04
3098--3136
16
2.4
17
86
4
53
35
0
0
64
0.94
3438--3483
18
2.5
19
73
20
53
47
0
4
47
1.21
3441--3501
32
1.9
31
86
3
86
47
1
3
47
1.28
3428--3490
16
4.0
16
74
15
51
47
0
4
47
1.23
3500--3540
14
2.9
15
82
10
50
31
2
2
63
1.20
3681--3727
11
4.1
11
76
17
51
21
0
2
76
0.89
3681--3727
18
2.8
16
84
15
60
21
0
2
76
0.89
3931--3986
19
3.1
18
73
12
53
46
0
0
53
1.00
11018--11059
2
21.0
2
100
0
84
50
0
0
50
1.00
12763--12809
22
2.1
22
84
11
60
29
6
2
61
1.32
15272--15322
14
3.6
14
81
0
57
45
0
0
54
0.99
15305--15343
13
3.0
13
80
0
51
56
2
0
41
1.13
24863--24894
3
10.7
3
100
0
64
31
0
0
68
0.90
25196--25276
38
2.2
37
84
4
108
48
2
3
45
1.33
26344--26390
2
23.5
2
100
0
94
48
0
0
51
1.00
26454--26519
34
1.9
34
82
11
82
54
0
0
45
0.99
26472--26519
24
1.9
25
91
8
80
54
0
0
45
0.99
26477--26518
15
2.6
17
78
21
54
57
0
0
42
0.99
26546--26608
32
2.1
30
82
8
74
53
0
3
42
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26577--26630
24
2.3
24
77
3
65
57
0
0
42
0.98
26583--26643
14
5.0
12
73
23
56
55
0
0
44
0.99
26582--26643
25
2.5
24
79
10
63
56
0
0
43
0.99
29409--29798
215
1.8
216
90
3
642
41
4
7
46
1.52
29853--29897
20
2.3
19
78
14
56
46
0
0
53
1.00
29866--29915
16
3.0
16
82
5
55
50
0
0
50
1.00
30424--30471
2
24.0
2
91
0
78
47
2
0
50
1.12
34332--34409
28
2.7
29
80
9
72
33
1
1
64
1.10
34351--34420
29
2.4
29
85
7
97
31
0
0
68
0.90
34357--34427
10
7.3
10
88
7
94
29
0
0
70
0.88
34357--34427
19
3.7
19
85
9
90
29
0
0
70
0.88
34565--34599
18
1.9
18
94
0
61
22
0
2
74
0.95
34750--34871
39
3.2
39
71
14
110
47
0
0
52
1.00
38201--38243
2
21.5
2
100
0
86
48
0
0
51
1.00
38754--38807
14
3.5
15
80
16
65
50
0
0
50
1.00
38760--38807
16
2.9
17
74
20
57
47
0
0
52
1.00
38762--38814
14
3.5
14
74
18
52
47
1
0
50
1.12
38837--38870
17
2.1
16
88
5
50
32
5
0
61
1.20
38862--38905
22
2.1
21
83
8
54
31
2
0
65
1.05
39224--39264
14
2.9
15
85
7
50
51
0
0
48
1.00
39198--39313
42
2.9
38
74
15
110
49
0
0
50
1.06
39249--39313
20
3.4
19
73
10
62
47
0
1
50
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39204--39328
39
3.1
38
75
13
101
50
0
0
48
1.12
44323--44367
23
1.9
24
86
4
65
53
0
0
46
1.00
47524--47550
4
6.8
4
100
0
54
25
0
22
51
1.48
48563--48613
10
5.0
10
77
17
52
31
0
1
66
1.03
48578--48623
21
2.1
22
88
11
69
39
0
0
60
0.97
49170--49214
16
2.7
16
79
6
54
33
0
2
64
1.06
49504--49567
16
4.0
16
75
18
53
46
0
1
51
1.10
49517--49578
32
1.9
32
90
6
99
46
1
0
51
1.10
49522--49590
33
2.1
33
86
5
95
43
2
1
52
1.25
49577--49617
14
2.9
15
82
10
50
31
2
2
63
1.20
49577--49655
39
2.2
38
82
11
94
29
3
2
64
1.24
49761--49802
18
2.3
19
80
19
54
21
0
2
76
0.90
50014--50071
20
3.1
19
71
9
57
44
0
0
55
0.99
56197--56229
16
2.0
17
88
5
50
42
0
0
57
0.98
56201--56271
29
2.5
28
75
6
72
50
0
0
49
1.00
57081--57108
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!