Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2237
Parameters: 2 7 7 80 10 50 1000
Length:  70754

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2616--2665
25
2.0
25
100
0
100
32
8
40
20
1.81
6342--6366
13
1.9
13
100
0
50
36
16
16
32
1.90
6214--6473
137
1.9
138
92
2
443
32
17
14
35
1.90
8252--10343
278
7.6
278
83
4
2366
38
14
10
36
1.80
8252--10343
553
3.8
551
82
4
2400
38
14
10
36
1.80
8252--10326
831
2.5
827
86
2
2851
39
14
10
36
1.80
11509--11535
2
13.5
2
100
0
54
48
0
0
51
1.00
11914--11948
2
17.5
2
87
0
52
45
0
5
48
1.26
12801--12886
13
6.1
15
72
15
67
55
1
1
41
1.14
12789--12888
43
2.3
44
80
16
111
55
1
1
43
1.13
12884--12961
11
7.5
11
72
16
51
64
0
3
32
1.12
12884--12941
22
2.6
22
79
12
64
65
0
3
31
1.09
13924--13986
20
3.2
19
82
14
74
0
20
0
79
0.73
13924--13989
19
3.4
19
76
21
66
0
21
0
78
0.75
13921--13980
30
2.0
29
83
3
75
0
18
0
81
0.69
14965--15043
18
4.3
18
75
12
81
2
18
0
78
0.86
14974--15044
35
2.1
34
82
12
85
2
18
0
78
0.86
15423--15463
15
2.7
15
76
0
55
46
14
24
14
1.82
17674--17792
51
2.4
51
88
4
181
28
16
10
43
1.82
18176--18215
12
3.2
12
85
3
53
27
30
5
37
1.78
22516--22576
20
3.0
20
85
2
86
36
13
11
39
1.80
24743--24981
97
2.4
98
87
2
338
27
26
12
33
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35799--35847
15
3.3
15
80
2
55
85
10
0
4
0.71
35801--35847
19
2.4
19
82
3
58
85
10
0
4
0.74
37122--37447
28
11.2
28
82
6
323
29
30
16
23
1.96
37113--37491
84
4.3
83
77
10
316
29
28
16
25
1.97
37128--37503
56
6.4
62
75
10
172
29
28
16
25
1.97
38639--38714
20
3.8
20
83
0
107
31
14
14
39
1.86
38639--38717
40
2.0
39
92
2
131
31
13
15
39
1.86
40899--41142
98
2.5
98
89
2
366
28
27
12
31
1.93
42825--42871
18
2.6
18
83
12
60
82
12
2
2
0.84
42825--42871
19
2.5
19
89
3
69
82
12
2
2
0.84
42831--42869
15
2.5
15
87
4
51
84
12
0
2
0.72
44177--44815
28
22.7
28
81
7
638
30
29
16
23
1.96
48229--48446
98
2.2
98
88
3
330
27
25
13
33
1.93
49846--50255
208
2.0
208
95
0
741
29
20
22
28
1.98
59764--60458
28
24.4
28
80
7
611
29
30
16
23
1.96
62303--62343
21
2.0
22
85
9
59
21
14
9
53
1.70
68939--69088
52
2.9
52
88
4
214
32
16
16
34
1.92
70147--70193
20
2.3
21
85
10
62
76
6
4
12
1.12
70306--70349
18
2.4
18
84
3
52
77
6
0
15
0.97

Tables:   1

The End!