Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold225
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 857989
ACGTcount: A:0.32, C:0.18, G:0.17, T:0.33
File 1 of 5
Found at i:630 original size:336 final size:322
Alignment explanation
Indices: 25--906 Score: 751
Period size: 336 Copynumber: 2.7 Consensus size: 322
15 TGTTGGATGA
* * * **
25 ATGAAACAAACAAGGATT-TTATAATA-CTCTTCATTCTTTTCCATGATTTAGG-TGAC-AAACA
1 ATGAAACAAACAACGATTCGTATAATAGATCTTCATTC-TTTCCATGA-TTAGGAAAACAAAACA
* * * * * * *
86 C--TTCTCCTTTCTGGGATACACG-ATATTCATGCTTTGATTTCGTTTGAGAAAA-TGTTTTCCC
64 CTATTCT-CTTTTTGGGATACACGCA-AGTAATGTTTTGGTATCG-TTGAGAAAAGTTTTTTCCC
* * * *
147 TACC-TTTTTCTTCGATTTAAAAGTTT-CACTTTAAATGACG-ACAAAC-TGGGATCTACGAAAA
126 TACCATTTTCCTTAGA-ATAAAAGTTTACACTTTAAATGA-GAACAAACAT-GGATGTACG-AAA
*
208 AAAATCTCGTTTCTTTAAATGATTGGTCA-CAT--ACCCGTTATTTCATTGGAGGGCACAATATG
187 AAAATCTCGTTTCTTTAAATGATTGG-CACCATAAACACGTTATTTCATTGGAGGGCACAATATG
* * * * * * *
270 ATTGAATTGGTTTT-GAAAGAAGAAAAGCTTTTCTTTCTGCCATTGATTTTCCTTCTATTTTGCG
251 ATTGAATTGGTTTTAG-AAGAATAAACGCTGTTCTTGC--CCA-TGACTTTCCTTATATTTTGAG
* *
334 TTTGTATGTGG
312 TTAGTATGTAG
* *
345 ATGAATAAACAAACAACGCTTCGTATACTA-ATCTTCATTCTTTCCATGATTAGGTGGTAAAACA
1 ATG---AAACAAACAACGATTCGTATAATAGATCTTCATTCTTTCCATGATTA---GG-AAAACA
*
409 AAACAC-ATTCTCTCCTTTTTGTAGGTATAAACACG-ATAGT-ATGTTTTTG-ATCGTTGAGAAA
59 AAACACTA-T-TCT-CTTTTTG--GG-AT--ACACGCA-AGTAATGTTTTGGTATCGTTGAGAAA
*
470 AGTTTTTTCCCTAACCATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGAAAAAACATGGAT
115 AGTTTTTTCCCT-ACCATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGAACAAACATGGAT
535 GTACG-AAAAAATCTCGTTTCTTT-AATGATTGGGCCACCATAAACACGTTATATCTTTCATTGG
179 GTACGAAAAAAATCTCGTTTCTTTAAATGATT-GG-CACCATAAACACG-T-TA--TTTCATTGG
598 -GAGGCACAATATGA-TGAATTGGTTTT-GAAGAAAATAAACGCTGTTCTTGCCCATGACTTTCC
238 AG-GGCACAATATGATTGAATTGGTTTTAGAAG--AATAAACGCTGTTCTTGCCCATGACTTTCC
660 TTATATTTTGAGTTAGTATGTAG
300 TTATATTTTGAGTTAGTATGTAG
* * * * *
683 ATGAAACAAACAAGGATTCTTATAATAGATCTTCATTTTTTCCATGATTAGGCAAGCAAAACACT
1 ATGAAACAAACAACGATTCGTATAATAGATCTTCATTCTTTCCATGATTAGGAAAACAAAACACT
* * *
748 ATTCTCTTTTTGGGATACACGCAATTAATGTTTTGGTTTCG-TGAGAAAAGTTGTTTTCTCTACC
66 ATTCTCTTTTTGGGATACACGCAAGTAATGTTTTGGTATCGTTGAGAAAAGTT-TTTTCCCTACC
* * * * *
812 A--TTCCTTAGAATACAAGTTTATACATTAAATGAGATCAAACATGGAATGAACGAAAAAAATCT
130 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGAACAAACATGG-ATGTACGAAAAAAATCT
** *
875 CAATTCTTTCAATGATTCAGGCACCATAAACA
194 CGTTTCTTTAAATGATT--GGCACCATAAACA
907 GGTTTATTCA
Statistics
Matches: 467, Mismatches: 50, Indels: 83
0.78 0.08 0.14
Matches are distributed among these distances:
320 3 0.01
322 3 0.01
323 22 0.05
324 54 0.12
325 15 0.03
326 40 0.09
327 32 0.07
328 10 0.02
330 8 0.02
331 13 0.03
332 11 0.02
333 21 0.04
334 36 0.08
335 42 0.09
336 64 0.14
337 5 0.01
338 31 0.07
339 8 0.02
340 14 0.03
341 35 0.07
ACGTcount: A:0.32, C:0.16, G:0.15, T:0.36
Consensus pattern (322 bp):
ATGAAACAAACAACGATTCGTATAATAGATCTTCATTCTTTCCATGATTAGGAAAACAAAACACT
ATTCTCTTTTTGGGATACACGCAAGTAATGTTTTGGTATCGTTGAGAAAAGTTTTTTCCCTACCA
TTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGAACAAACATGGATGTACGAAAAAAATCTCG
TTTCTTTAAATGATTGGCACCATAAACACGTTATTTCATTGGAGGGCACAATATGATTGAATTGG
TTTTAGAAGAATAAACGCTGTTCTTGCCCATGACTTTCCTTATATTTTGAGTTAGTATGTAG
Found at i:8805 original size:323 final size:315
Alignment explanation
Indices: 7737--30002 Score: 16430
Period size: 317 Copynumber: 70.8 Consensus size: 315
7727 CCAAACATGA
*
7737 ATTCTTATAATAATCTTCA-TCTTTCCATGATTAGGCCAA-AAAAGCCACATTCTCC-TCTTTGG
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAA--CACATTCTCCAT-TTTGG
* * * * * * * *
7799 GA-CCCAAACTATTAACCGCTTCTGA-TTCTTGAGAAAAGTTTTTTCTTCTACCTTTTCATTAAA
62 GATACC-GA-TATTAA-TGCTT-TGATTTCGTGAGAAAAGTTTTTTC-CCTACCATTTCCTTAGA
* * * * *
7862 ATACAAGTTTTAC-TTTTAATGAGACAAACATGGAT-TACG-CAAAAAATCTCAATTCTTCCAGT
122 ATAAAAG-TTTACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTCA-T
* * * * * * * * *
7924 GATT-GG-CCCCATGAAGACGTTA-TCTTCGTTAGGATGCACAATATTGACGCATTGGTCTTTGT
184 GATTGGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGT-TTTGA
* * * ** *
7986 A-AG-AAAGCTTTCCTTGCCCGATTTTCCTTATT-TTGCTTG-GTTCGTGTGTTAAAATGAAAC-
246 ACAGAAAAGCTTT-CTTGCCTGATTTTCCTTATTATT--TTGAGTTTGTATGTTGGATTGAAACA
*
8046 ACCAGCATGG
308 AACA-CA-GG
* ** * * * * * *
8056 ATTCTTATAAAAAATCCGCATTCTGTTCC-TGATTACGCATCCAAACAAAACGTT-TCCTCTTTT
1 ATTCTTAT-AATAATCTTCATTCT-TTCCATGATTAGGTA-AC-AA-AACACATTCTCC-ATTTT
* * * *
8119 GGGGATACACAGATATTAATGCTTTGATTTCAT-TGAAAAGTTTTTTCTCTACCATGTTCCTTCG
60 -GGGATAC-C-GATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCAT-TTCCTTAG
* * * * *
8183 AAGAACAGTTTACACTTAAATGAAACAAACATGGATCTACG-AAAAAAATCTCCTTTCCTTCATG
121 AATAAAAGTTTACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTCATG
* * *
8247 ATTGGG-CACC-TATAACACGTTTC-TTCATTGGGGAGGCCCAA-ATTGATGAATGGTTTT-CAC
185 ATTGGGACACCATA-AACACGTTACTTTCATT-GGGAGGCACAATATTGATGAATGGTTTTGAAC
* * * * * *
8307 AGACAAAGTTTTCCTGCTGATGATTTTCCTTATTATTTGGTCGTTTGTATTTTGGA-TGAAAACA
248 AGA-AAAGCTTTCTTGC--CTGATTTTCCTTATTATTTTG-AGTTTGTATGTTGGATTG-AAACA
8371 AACACAGG
308 AACACAGG
* *
8379 ATTTTTACTAATAATCTTC-TTCTTTCAATGATTAGGTAGACAACAACACATT-TCCATTTTGGG
1 ATTCTTA-TAATAATCTTCATTCTTTCCATGATTAGGTA-ACAA-AACACATTCTCCATTTTGGG
* *
8442 ATACACGATATTTCATGCTTTGATTTCGTGAGAAAAGTTTTTTTCCCTACCATTTCTTTAG-ATA
63 ATAC-CGATA-TTAATGCTTTGATTTCGTGAGAAAAG-TTTTTTCCCTACCATTTCCTTAGAATA
8506 AAAGTTTACATTTACAATGAGACACAACATGGATCTACGAAAAAAAATTCTCGTTTCTTTTCTAC
125 AAAGTTTACATTTA-AATGAGACA-AACATGGATCTACGAAAAAAAA-TCTC-TTTC-TTTC-A-
* *
8571 TGATTGGGACACCATAAACACGTTACTTTCATTGGGAGGCACAATATTGCTGAATTGTTTTGAAC
183 TGATTGGGACACCATAAACACGTTACTTTCATTGGGAGGCACAATATTGATGAATGGTTTTGAAC
* **
8636 AG-AAAGCTTTATTGCCTG-TTTTCCTTATTATTTTGAGTTTGTATGTTGGATTG-ATGAAACAC
248 AGAAAAGCTTTCTTGCCTGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACAC
8698 AGG
313 AGG
* **
8701 ATTCGGT-TAATAATCTTCATTCTTTCCCATGATTCAGGTAACAAAACACATTCTCTTTTTTGGG
1 ATTC-TTATAATAATCTTCATTCTTT-CCATGATT-AGGTAACAAAACACATTCTCCATTTTGGG
* *
8765 AGTACCGATATTCAATGTTTTGATTTCGTGAGAAAAGTTTTTTCCTTACCATTTTCCTTAGAATA
63 A-TACCGATATT-AATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATA
* * * * * *
8830 AACGTTTACACTTTACAGAT-AGACAAACATGGATGTATCGAAAAAATATCTC-ATCTTTAAAGT
125 AAAGTTTACA-TTTA-A-ATGAGACAAACATGGATCTA-CGAAAAAAAATCTCTTTCTTTCATG-
* * *
8893 ATTGGGAC-CAATAAAACACGTTATTCTTCA-TGGGAGGCACAATATTGATGGCATGGTTTTGAA
185 ATTGGGACACCAT-AAACACGTTACT-TTCATTGGGAGGCACAATATTGAT-GAATGGTTTTGAA
* * *
8956 -AGAAAAAGCTTTTCTTTCCATGACTTTCC-T-TTATTTTGAG-TTGTATGTTCAGATTGAAACA
247 CAG-AAAAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTT-GGATTGAAACA
9017 AACA-AGGATG
308 AACACA-G--G
* * *
9027 ATTCTTATAATAAT-TTCATTTTTTCCATGATTAGGCAAGGCCAAAACACCA-TCTCCCTTTTGG
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAA---CAAAACA-CATTCTCCATTTTGG
* * * *
9090 GATTACACCGATATTACTGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTACCATTTCCTTAGACA
62 GA-T--ACCGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTCCTTAGA-A
* ** * *
9155 TACAAGTTTATACA-TTAAATGAGACAAACATGGATGAACG-AACAAAATCTCAGATTC-TTCAA
123 TAAAAG-TT-TACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC--TTTCTTTC-A
* * * *
9217 TGA-T-CG-CACCATAAAC-CAGGT-CTAT-ATT-----G-AC------GCT---TGGTTTTG-A
183 TGATTGGGACACCATAAACAC-GTTACTTTCATTGGGAGGCACAATATTGATGAATGGTTTTGAA
* * * * *
9260 CAAAAAAGCTCTTCTT-CCACGATTTTCCTTA-TACTTTGATGTTCGTATGTTCGA-TGAAACCA
247 CAGAAAAGCT-TTCTTGCC-TGATTTTCCTTATTATTTTGA-GTTTGTATGTTGGATTGAAA-CA
9322 AA-ACATGG
308 AACACA-GG
* * * *
9330 ATTCTTATTAT-ATC-TCATTCTTTCCATGATCTA-GCAAAAGAAACTATATTCTCC-TTTTGGG
1 ATTCTTATAATAATCTTCATTCTTTCCATGAT-TAGGTAACA-AAAC-ACATTCTCCATTTTGGG
* * *
9391 ATTACACGATATTAAT-C-TTG-TTT-ATTA-AAAAG-TTTTTCTCT-CCATTT-CTTAGAATAA
63 A-TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTCCTTAGAATAA
* * * * *
9448 AAGTTTATACTTTAAA-AAGGACAAACACGGAATCTAC---AGAAAGTCCTCATTTCTTTCAATG
126 AAGTTTACA-TTTAAATGA-GACAAACATGG-ATCTACGAAAAAAAAT-CTC-TTTCTTTC-ATG
* *
9509 TTTTGGG-CACCATTAA-ACGCTT-CTCTTCCATT-GGAGGCAC-ATATT-ATTGAATTGGTTTT
185 -ATTGGGACACCATAAACACG-TTACT-TT-CATTGGGAGGCACAATATTGA-TGAA-TGGTTTT
* **
9568 GAA-AG-AAAGCTTTTCTTGCCATGCA-TTTCCTTA-TATTTTGAGTTCGTATGTT-TTTTCAGA
244 GAACAGAAAAGC-TTTCTTGCC-TG-ATTTTCCTTATTATTTTGAGTTTGTATGTTGGATT--GA
*
9628 TGAACAAACA-ACG
304 --AACAAACACAGG
* * *
9641 TTTCTTAT--TAAGTCTTCATTCTTTCCATGATTAGGCAAACAACAACACATTCTCCTTTCTGTG
1 ATTCTTATAATAA-TCTTCATTCTTTCCATGATTAGG-TAACAA-AACACATTCTCCATT-T-TG
* *
9704 GGCATACACGATATTAA-GCTTTGA-TTCGTGAGAAAAG--TTTTCTCTTCCATTTTCCTTAGAA
61 GG-ATAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAA
* * * * *
9765 TAAAAGTTT-CTACTTTAAATGAGTGCAAAACATGGAT-T---AAGAAAAGTCTCCCTTCTGTCA
123 TAAAAGTTTAC-A-TTTAAATGAG-AC-AAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-
* * * * *
9825 ATGTTTGGG-CACCATTCTAAACAACGTTA-TGTCTCGTGGGAGGAGGCACCA-AGT-ATG-AT-
182 ATGATTGGGACACCA---TAAAC-ACGTTACT-T-TCAT-TG-GGAGGCACAATATTGATGAATG
* * * *
9884 GTTGTTG-ACAGAAAAGCTTGTTTTTGCCAGTGA-TTTCC-T-CTA-TTTGAGGTCGTA-G--GG
239 GTT-TTGAACAGAAAAGC-T-TTCTTGCC--TGATTTTCCTTATTATTTTGAGTTTGTATGTTGG
** *
9941 AGAGGAAACACAACA-ACG
299 A-TTGAAACA-AACACAGG
* * *
9959 -TTGCTTAT-AT--GCTGCTATTCGGTTTCCA-G---AGGCAAACAAAACATCACGTTCGTCCGG
1 ATT-CTTATAATAATCTTC-ATTC--TTTCCATGATTAGG-TAACAAAACA-CA--TTC-TCC--
* * * *
10016 GTTTTGGGA-ACACGATAATAATG-TTTGATCTTGATTCGTGAGAAAATTTTTTTTCTCTACC-T
55 ATTTTGGGATAC-CGATATTAATGCTTTGA---T--TTCGTGAGAAAA-GTTTTTTCCCTACCAT
* * * **
10078 TTTCTTATAATAAAACGTTCACACTTTAAATGAGACAACAATCATGGATCTACG-AAAAGCATCT
113 TTCCTTAGAATAAAA-GTTTACA-TTTAAATGAGAC-A-AA-CATGGATCTACGAAAAAAAATCT
* * * ** * *
10142 CCATTCTTTCAATGCTTGGG-CACCATAAAACACGTTA-TCTCA--GGGATACAGAAAATTGATG
173 -CTTTCTTTC-ATGATTGGGACACCAT-AAACACGTTACTTTCATTGGGAGGCACAATATTGATG
* * * * * * * ** *
10203 CATTGTTTTTGCA-AGAAGAGCTTTTCTTTGCCGAGATTTTCCTTA-CATTTTGTGTAAGTACGT
235 -AATGGTTTTGAACAGAAAAGC-TTTC-TTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATG-
* *
10266 TTAGATAT-AAACCAA-ACAGG
295 TTGGAT-TGAAACAAACACAGG
* * *
10286 ATTCTTAT--TAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACAC-TCCTTTCCTTTTTGGG
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAA-CAAAACACAT--TCTCCATTTTGGG
* * * * * *
10348 AT-CCGATATTAA-CCTTTGGTTTCGTCAG--GAGTTTTTT--CT-CTATTTTCTCTAG-ATAAA
63 ATACCGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTCCT-TAGAATAAA
* **
10405 AGCTTATAC-TTTACATGAGGACAAACATGGAAT-TACG---AAAAATCTCCATCTTTCACATGA
127 AG-TT-TACATTTAAATGA-GACAAACATGG-ATCTACGAAAAAAAATCTCTTTCTTT--CATGA
* * *
10465 TTCGG-CACCATAAA-A-G-TA-TATTC-TT--GA--CGC---A-TG--G--T--TTTTGCA-AG
186 TTGGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAG
* * * *
10509 AAAAGTCTTT-TTCCCACGATTTTCCTTA-TA-TTTGAGTTCGTTATG-TAGA-TGAAACAAA-A
250 AAAAG-CTTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTG-TATGTTGGATTGAAACAAACA
*
10568 CATGA
312 CA-GG
* * *
10573 ATTCTTTATAATAATCTTC-TTCTTTCCCTGATTAGCGCAAACCAAGGACA-ATTCTCC-TCTTT
1 ATTC-TTATAATAATCTTCATTCTTTCCATGATTAG-G-TAA-CAA-AACACATTCTCCAT-TTT
* * * * * * * * *
10635 GGTATGCCCCAACATTTAACAGC-CTGATTTCGAG-GAAAA---TTTGCTCTACCATTTTCCTTA
60 GGGAT--ACCGATA-TTAA-TGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTA
* * * ** *
10695 GCAATAAAAGTTTATACTTTAACTGAGA-AAA-ATTGGATCTAC--AGAAACGTCTCCATTCTTT
120 G-AATAAAAGTTTACA-TTTAAATGAGACAAACA-TGGATCTACGAAAAAAAATCT-CTTTCTTT
** * * * * * *
10756 CAATTTTGTGGCTGGGCACCCTAACCACGTTATTTCTCATTGGGAGGCACAACTAATGATGAATT
181 C-ATGAT-T-G--GGACACCATAAACACGTTACTT-TCATTGGGAGGCACAA-TATTGATGAATG
* * * * *
10821 GTTTTG--CGAGGAAAAGCGTTT-TTGCATGATTTTCCTT-CT-TTGTGAGTTCGTA-G-TAGA-
239 GTTTTGAAC-A-GAAAAGC-TTTCTTGCCTGATTTTCCTTATTATTTTGAGTTTGTATGTTGGAT
* *
10878 TGAAAGAAACA-ACG
301 TGAAACAAACACAGG
* * * * * *
10892 TTTCTTATATAAAAATCTTCATTCATTCC-TGATT-GGCAAACAAAA-A-ACT-TCCTTTTTGGG
1 ATTC-T-TATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGG
* * *
10952 ATACACAATATTATATTGCTTTGATTTCGTGAG-AAAGTTTTTTCTCTGCCATTTTCCTTAGAAA
63 ATAC-CGATATTA-A-TGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAG-AA
* *
11016 TAAAAG-TTACACTTT-AATGAGACAAACCTGGGATCTACG--AAAAAATGCTCCATTCTTTCAA
123 TAAAAGTTTACA-TTTAAATGAGACAAACAT-GGATCTACGAAAAAAAAT-CT-CTTTCTTTC-A
* * * ** * * *
11077 TGATTCGG-CACCATTAACCCACGTCTTA-TCTGCATTGGGATACAAAAAATTGA-GCATGG-TT
183 TGATTGGGACACCA-TAA-ACACG--TTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTT
* * * ** * * * * *
11138 TGCA-AGAAGAGCTTTTCTTGCCCACGATGTTTCCTTACCATTTTG-CTGTCGGACGTTTGA-TG
243 TGAACAGAAAAGC-TTTCTTG-CC-TGAT-TTTCCTTATTATTTTGAGT-TTGTATGTTGGATTG
11200 AAAC-AACA-A-G
303 AAACAAACACAGG
* * * * * *
11210 A-TCGTGGTATTATAATCTTCCTAGTCTTTCC-TGATTCGGCAATACCAAAACA-ATTTTCCCTT
1 ATTC-T--TATAATAATCTT-C-ATTCTTTCCATGATTAGG---TAACAAAACACATTCTCCATT
* *
11272 TGTGGGAGATTTTTTTTAACATGATATTAATGCTTTGATTTCTGTGAGAAAAG-TTTTTCTCTAC
58 T-T-GG-GA-------T-AC-CGATATTAATGCTTTGATTTC-GTGAGAAAAGTTTTTTCCCTAC
* * * * *
11336 CATTTCC-TAG-ATACAAGTTATAC-TTT-AATGAGAC-AATATGGATATACGAAAAATACTCTA
110 CATTTCCTTAGAATAAAAGTT-TACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-
** *
11396 C-TTCTTTCAATGATTCGGG--ACCATAATAGGC-CCCTA-TATACATT--GA--CAGC--TATT
173 CTTTCTTTC-ATGATT-GGGACACCATAA-A--CACGTTACT-TTCATTGGGAGGCA-CAATATT
** * * ** * * * * *
11450 G--GTTTTGCTAAGAA-AAAGAAAGCTCTTTCTT-CCACGA-TTGCCTTAATTATTGTGAGTTCG
231 GATGAATGGTTTTGAACAGA-AAAG--CTTTCTTGCC-TGATTTTCCTT-ATTATTTTGAGTTTG
* * *
11510 -ATTGATGTAGA-TGAAAC-AACA-TGA
291 TA-TG-T-TGGATTGAAACAAACACAGG
*
11534 ATTCTTATAATAATC-TCATTCTTTCCATGATTAGGCAACAAAACACATTCTCC-TCTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAACAAAACACATTCTCCAT-TTTGGGAT
* * * * *
11597 ACCAAGATATTAAACGCTCTGATTTCGTGAG-AAAGTTTTTTCTCTACCATTTTCATTAAAATAA
65 ACC--GATATT-AATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAA
* *
11661 AA-TTTATACTTTAAAATGAGACAAACATGGATCTACG---AAAAATCTCAATTCTTTCAGTGAT
126 AAGTTTACA-TTT-AAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTCA-TGAT
* * * * * * * * *
11722 TGGG-CCCCATGAAGACGTTA-TCTCCGTTGGGATGCACAATATTGACTCATTGGTTTTGTA-AG
187 TGGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGA-TGAATGGTTTTGAACAG
* * * ** * * *
11784 AAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTTGAGTACGGATTGTT-AAATGAAACAAACA
250 AAAAGCTTT-CTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTA-TGTTGGATTGAAACAAACA
*
11848 -TGG
312 CAGG
* * * * * * * *
11851 ATTCTTATAAAAATCCTCATTCTTTCCATGATTTACGCATCCAAAACACGTTTTCCTCTTTTGGG
1 ATTCTTATAATAATCTTCATTCTTTCCATGA-TTAGGTA-ACAAAACACATTCTCC-ATTTTGGG
* * * * *
11916 ATACAAGATATTTAATGCTTTGATTTCATTAG-AAAGTTTTTTCTCTA-CATTTTCCTTAGAAGA
63 ATAC-CGATA-TTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATA
11979 AAAGTTTACACTTTAAATGAGGACAAACATGGATCTACG--AAAAAATCTCCTTTCTTTCAATGA
125 AAAGTTTACA-TTTAAATGA-GACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGA
*
12042 TTGGG-CACCAT-AACACGTTA-TCTTCATTGGGAGACACAATATTGATGAATTGGTTTTGAA-A
186 TTGGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACA
*
12103 GAAAAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTGGA-TGAAAC-AACA
249 GAAAAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACA
12165 -AGG
312 CAGG
* *
12168 ATTCTTATAATAATCTTCACTCTTTTCCATGATTAGGTAAACAAAACACATTCTCCTTTTTGGGA
1 ATTCTTATAATAATCTTCATTC-TTTCCATGATTAGGT-AACAAAACACATTCTCCATTTTGGGA
*
12233 TACCACGATATTAATGCCTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAA
64 TA-C-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAA
*
12298 AAGTTTACACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCGTTTCTTTAAATGATT
126 AAGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTT-CATGATT
12361 GGG-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AG-
188 GGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGA
* ** *
12422 AAAGCTTTTCTTGCCATATGACTTTCCTTA-TATTTTGAGTTCCTATGTTAGA-TGAAACAAACA
251 AAAGC-TTTCTTGCC---TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACA
12485 -AGG
312 CAGG
* * *
12488 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACACGTTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAA-CAAAACACATTCTCCATTTTGGGAT
* * * * *
12553 ACACGATATTAATGTTTTTGGTTT-GTGAGGAAAAGTTTTTTCTCTAACATTTTCCTTAGAATAC
65 AC-CGATATTAATG-CTTTGATTTCGTGA-GAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAA
* ** *
12617 AAGTTTAAACTTTTAAATGAGACAAACATGGATGAACG---AAAAATCTCAATTCTTTCAATGAT
126 AAGTTT--ACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTC-ATGAT
** * * *
12679 TCAG-CACCATTAAACAGGTTA-TATTCATT--GA--CGC---A-T--T--A--GTTTTGCA-AG
187 TGGGACACCA-TAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAG
* * * * * *
12727 AAAAGCTCTTCTTCCCACGATTTTCCTTA-CATTTTGAGTTCGTACGTTAGA-TGAAACAAACA-
250 AAAAGCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACAC
*
12789 TGG
313 AGG
* * * * * *
12792 ATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACATATTCTCC-TTTTTGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * * *
12856 ACACGATATTAATGCTTTGATTTCATTAAAAAAGTTTTTTCTCTACCATTTTCCTTAGAAT-AAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * * *
12920 GTTTATACTTTAAATGAGAC-AACATGGAT-TAC--AGAAAAGTCTCCATTCTTTCAATGTTTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
* * *
12981 G-CACCATAAACGCGTTA-TCTTCATTTGGAGGCACAATATTAATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAG-AA
* * * *
13043 AAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTCTGTTAGA-TGAAACAAACA-AC
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
13105 G
315 G
* * * *
13106 TTTCTTATAATAGTCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
*
13171 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * * *
13236 GTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
*
13299 G-CACCCCTAAACACGTTA-TCTTCATTGGGA-GCACAATATTGATGAATTTGGTTTTG-ACAGA
190 GACA-CCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA--TGGTTTTGAACAGA
* * *
13360 AAAGCTTTTCTTGCCATGATTTTCCTTA-TA-TTTGAGTTCGTATGTTAGA-TGAAAGAAACA-A
251 AAAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA
*
13421 CG
314 GG
* * * *
13423 TTTC-TATAATAATCTTCATTCATTCCATGATTAGGCAACACAAA-ACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAACA-AAACACATTCTCCATTTTGGGAT
* * * *
13486 ACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGCCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* *
13551 GTTTACACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCCATTCTTTCAATGATTCG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
** * * * * *
13614 G-CACCATAAACACGTTA-TCTTCATTGGGATACAAAAAATTGATGCATTGGTTTTGCA-AGAAG
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAAA
* * * * * * *
13676 AGCTTTTCTTGCCACGATTTTCCTTA-CATTTTGTGTTCGTACGTTAGA-TGAAACAAACA-AGA
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * * * *
13738 ATTCTTATTATAATCTTCATTCTTTCCAAGATTAGGCAAACAAAACATATTTTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * *
13803 ACATGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATACAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * *
13868 GTTTATACTTTAAATGAGACAAATATGGATCTACG--AAAAAATCTCCATTCTTTCAATGATTCG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
* * * *
13931 G-CACCATAAATAGGTTA-TATTCATT--GA--CGC---A-T--TG---GG-TTTGCA-AGAAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAAAA
* * * * * * *
13979 GCTCTTCTTCCCACGATTTTCCTTA-CATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-TGA
254 GCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * *
14040 ATTC-TATAATAATCCTCATTCTTTCCATGATTAGGCAAACAAGACACATTCTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCAT-TTTGGGA
* * * * * *
14103 T-CCAACATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCATTAAAATAA
64 TACC--GATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAA
* * *
14167 AAGTTTATACTTTAAATGAGACAGACATGGATCTACG--AAAAAATCTCAATTCTTTCAGTGATT
126 AAGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTCA-TGATT
* * * * * * * *
14230 GGG-CCCCATGAAGACGTTA-TCTTCGTTGGGATGCACAATATTGACGCATTGGTTTTGTA-AGA
188 GGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGA
* * * * * * * * *
14292 AAAGCTTTCCTTGCCACGATTTTCCTCATT-TTTTGAGTTCGAACGTT-AAATGAAACAAGCA-T
251 AAAGCTTT-CTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA
14354 GG
314 GG
* * * * * * * *
14356 ATTCTTAAAAAAATCCTCATTCTTTCCATGATAACGCATCCAAAACACATTTTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCCAT-TTTGGGA
* * * * *
14420 TACAAGATGTTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
* * * * *
14485 AGTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
* * * *
14548 GG-CACCATAAACGCGTTA-TCTTCCTTTGGAGGCACAATATTAATGAATTGGTTTTGAA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAA
* * *
14610 AAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-AC
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
14672 G
315 G
* * * * *
14673 TTTCTTATAATAGTCTTCATTCTTTCCATGACTAGGCAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
*
14738 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * * *
14803 GTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
14866 G-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTG-ACAGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* * *
14928 AGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-ACG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * *
14990 TTTCTTATATTAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* *
15055 ACACGATATTAATGCTTTGATTTCGTGAAAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * *
15120 -TTTCACACTTTAAATGAGAAAAACATGGATCTACG--AAAGAATCTCCATTCTTTCAATGATTG
128 GTTT-ACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
* ** * * * * *
15182 GG-CACCATAAACACGTTA-TCTTCGTTGGGATACAGAAAATTGATGCATTGTTTTTGCA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAA
* * * * ** * * * *
15244 GAGCTTTTCTTGCCGCGATTTTCCTTA-CATTTTGTGTAAGTACGTTAGA-TAAAACAAACA-TG
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
15306 G
315 G
* * * *
15307 ATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACATC-TTCTGCTTTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACA-CATTCTCCATTTTGGGA
* * * *
15371 TACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTCTTCTCTACTATTTTCCATAGAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
* *
15436 AGTTTGTAC-TTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCCATTCATTTAATGATT
127 AG-TT-TACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTC-TTTCATGATT
* * * *
15498 -CGACACCATAAACAGGTTA-TATTCATT--GA--CGC-------AT---TGGTTTTGCA-AGAA
188 GGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAA
** * * *
15546 AAGCTCTTCTTGCCATGATTTTCCTTA-CGTTTTGAGTTCGTATGTTAGA-TGAAACAAACA-TG
252 AAGCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
*
15608 A
315 G
* * * *
15609 ATTCTTATAATAATCTTCATTCTTTCCGTGATTAGGCAAACAAAACACATTCT-CTTCTTTGGGC
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCAT-TTTGGGA
* * *
15673 TACACGATGTTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAAAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
* *
15738 AGTTTATACTTTAAATGAGACAAACATGGATCTACG---AAAAATCTCAATTCTTTCAGTGATTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTCA-TGATTG
* * * ** * * ** ** *
15800 GG-CTCCCTGAGGACGTT-GTCTTCATTGGGATGCACAATATTGGCGCTTTGGTTTTGCA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAA
* * * * *
15862 AAGCTTTCCTTGCCATGATTTTCCTCATT-TTTTGAGTTCGTATGTT-AAATGAAA-AAAGCA-T
252 AAGCTTT-CTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAA-CACA
15923 GG
314 GG
* * * *** * * *
15925 ATTCTTATAAAAATCTTAATTCTTTCCATGAGTACACATCCAAAACACGTTTTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCCAT-TTTGGGA
* * * * * ** * *
15989 TACAGGATATCAAAGCTTTGATTTCATTAGAAAAGTTTTTTCTTTACCATTTTCCGTAAAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
*
16054 AGATTATAC-TTTAAATGAGACAAACATGGATCTACG---AAAAATCTCCATTCTTTCAATGATT
127 AG-TT-TACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATT
*
16115 GGG-CACCATAAACACATTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGA
188 GGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGA
* *
16177 AAAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-A
251 AAAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA
16239 GG
314 GG
* * * *
16241 GTTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAAAACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * * *
16306 ACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGCCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* *
16371 GTTTACACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCCATTCTTTCAATGATTCG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
** * * * * *
16434 G-CACCATAAACACGTTA-TCTTCATTGGGATACAAAAAATTGATGCATTGGTTTTGCA-AGAAG
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAAA
* * * * * * *
16496 AGCTTTTCTTGCCACGATTTTCCTTA-CATTTTGTGTTCGTACGTTAGA-TGAAACAAACA-AGA
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * * * * *
16558 ATTCTTATTATAATCTTCATTCCTTCCATGATTAGGCAAAGAAAACATATTTTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * *
16623 ACATGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATACAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * *
16688 GTTTATACTTTAAATGAGACAAATATGGATCTACG--AAAAAATCTCCATTCTTTCAATGATTCG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
* * * *
16751 G-CACCATAAATAGGTTA-TATTCATT--GA--CGC-------AT---TGGTTTTGCA-AGAAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAAAA
* * * * * * * *
16799 GCTCTCCTTCCCACGATTTTCCTTA-CATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-TGA
254 GCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* *
16860 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAAAAGACACATTCTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAACAAA-ACACATTCTCCAT-TTTGGGA
* * * * * * *
16924 -CCCAACATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCATTAAAATAA
64 TACC--GATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAA
* *
16988 AAGTTTATACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCAATTCTTTCAGTGATT
126 AAGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTCA-TGATT
* * * * * * * * *
17051 GGG-CCCCATGAAGACGTTA-TCTTCGTTAGGATGCACAATATTGACGCATTGGTTTTGTA-AGA
188 GGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGA
* * * * * * *
17113 AAAGCTTTCCTTGCCACGATTTTCCTTATT-TTTTGAGTTCGGATGTT-AAATGAAACAAGCA-T
251 AAAGCTTT-CTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA
17175 GG
314 GG
* * * * * * * *
17177 ATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACACGTTTTCCTCTTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCC-ATTTTGGGA
* * * * *
17242 TACAAGATATTAATGCTTTGATTTCATTAG-AAAGTTTTTTCTCTACCATTTTCCTTAGAAGAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
*
17306 AGTTTACACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCCTTTCCTTCAATGATTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
*
17369 GG-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTCAA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAA
* *
17431 AAGCTTTTCCTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTGGA-TGAAACAAACA-AG
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
17493 G
315 G
*
17494 ATTTTTATAATAATCTTCATTCTTTCCATGATTAGGTAGACAAAACACATTCTCC-TTTCTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCCATTT-TGGGA
*
17558 TACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGATTAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
*
17623 AGTTTACACTTTAAATGAGACAAACATGGATCTACG-AAAAAAATCTCGTTTCTTTAAATGATTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTT-CATGATTG
17687 GG-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAA
17749 AAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTTGTATGTTGGA-TGAAACAAACA-AG
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
17811 G
315 G
* *
17812 ATTCGTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGT-AACAAAACACATTCTCCATTTTGGGAT
*
17877 ACACGATATTAATGTTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* *
17942 GTTTACACTTTAAATGAGACAAACATGGATGTACG--AAAAAATCTCATTTCTTTAAATGATTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTT-CATGATTGG
18005 G-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* * *
18067 AGCTTTTCTTGCCATGACTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-AGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* *
18129 ATTCTTATAATAATCTTCATT-TTTCCATGATTAGGCAAGCAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAA-CAAAACACATTCTCCATTTTGGGAT
* * * *
18193 ACACGATATTAATGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATACAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
** * *
18258 GTTTATACA-TTAAATGAGACAAACATGGATGAACG--AAAAAATCTCAATTCTTTCAATGATTC
128 G-TT-TACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTC-ATGATTG
* * * *
18320 AG-CACCATAAACAGGTTA-TATTCATT--GA--CGC-------AT---TGGTTTTGCA-AGAAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAAA
* * * * * *
18368 AGCTCTTCTTCCCACGATTTTCCTTA-CATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-TGG
253 AGCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * * * *
18430 ATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACATATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * *
18495 ACACGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * * * * *
18560 GTTTATACTTTAAATAAGACAAACACGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
* * *
18623 G-CACCATAAACGCGTTA-TCTTCATTTGGAGGCACAATATTAATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* * *
18685 AGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-ACG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * * *
18747 TTTCTTATTATAGTCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
*
18812 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * * *
18877 GTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
*
18940 G-CACCATAAACACGTTA-TCTTCGTTGGGAGGCACAATATTGATGAATTGGTTTTG-ACAGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* * * *
19002 AGCTTTTTTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-ACG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * *
19064 TTTCTTATATTAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * * *
19129 ACACGATAATAATGCTTTGATTTCGTGAGAAAATTTTTTTCTCTACCATTTTCCTTATAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * *
19194 GTTCACACTTTAAATGAGACAAACATGGATCTACG--AAAGAATCTCCATTCTTTCAATGATTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
** * * * * * *
19257 G-CACCATAAACACGTTA-TCTTCATTGGGATACAGAAAATTGATGCATTGTTTTTGCA-AGAAG
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAAA
* * * ** * * * *
19319 AGCTTTTCTTGCCGCGATTTTCCTTA-CATTTTGTGTAAGTACGTTAGA-TAAAACAAACA-TGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * *
19381 ATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAA-CAAAACACATTCTCCATTTTGGGAT
* * * * * *
19446 ACACGATATTAA-CCTTTTGGTTTCGTCAGAAGAGTTTTTTCTCTACTATTTTCCTTAGAATAAA
65 AC-CGATATTAATGC-TTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
*
19510 AGCTTATAC-TTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCCATTCTTTCAATGATT
127 AG-TT-TACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATT
* * * *
19572 CGG-CACCATAAACAGGTTA-TATTCATT--GA--CGC-------AT---TGGTTTTGCA-AGAA
188 GGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAA
* * * * * *
19620 AAGCTCTTCTTCCCACGATTTTCCGTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-TG
252 AAGCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
*
19682 A
315 G
* * *
19683 ATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAGACACATTCTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCAT-TTTGGGA
* * * *
19747 T-CCAACATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAA
64 TACC--GATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAA
* * * * *
19811 AAGTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTT
126 AAGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATT
*
19874 GGG-CACCCTAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTG-ACAGA
188 GGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGA
* * *
19936 AAAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAAGAAACA-A
251 AAAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA
*
19998 CG
314 GG
* * * * *
20000 TTTCTTATAATAATCTTCATTCATTCCATGATTAGGCAAACAAAAAACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * * *
20065 ACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGCCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* *
20130 GTTTACACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCCATTCTTTCAATGATTCG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
** * * * * *
20193 G-CACCATAAACACGTTA-TCTTCATTGGGATACAAAAAATTGATGCATTGGTTTTGCA-AGAAG
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAAA
* * * * * * *
20255 AGCTTTTCTTGCCACGATTTTCCTTA-CATTTTGTGTTCGTACGTTAGA-TGAAAC-AACA-AGA
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * * * *
20316 ATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACATATTTTCCTTTTTGAGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * *
20381 ACATGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATACAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * *
20446 GTTTATACTTTAAATGAGACAAATATGGATCTACG--AAAAAATCTCCATTCTTTCAATGATTCG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
* * * * * *
20509 G-CACCATAAATA-G--GC--T-A-T---A--TAC---ATTGACGCATTGGTTTTGCA-AGAAAA
190 GACACCATAAACACGTTACTTTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAAAA
* * * * * *
20557 GCTCTTCTTCCCACGATTTTCCTTA-CATTTTGAGTTCGTATGTTAGA-TGAAA-AAA-ACATGA
254 GCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA-GG
* * *
20618 ATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAGACACATTCTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCAT-TTTGGGA
* * * * * *
20682 T-CCAACATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCATTAAAATAA
64 TACC--GATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAA
* * *
20746 AAGTTTATACTTTAAATGAGACAAACATGGATCTATG--AAAAAATCTCAATTCTTTCAGTGATT
126 AAGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTCA-TGATT
* * * * * * * * **
20809 GGG-CCCCATGAAGACGTTA-TCTTCGTTGGGATGCATAATATTGACGCATTGGTTTTCTA-AGA
188 GGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGA
* * * * * * * * *
20871 AAAACTTTTCTTGCCACGATTTTCCTCATT-TTTTGAGTTCGGATGTT-AAATGAAACAAGCA-T
251 AAAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA
20933 GG
314 GG
* * * * * * * *
20935 ATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACACGTTTTCCTCTTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCC-ATTTTGGGA
* * * * *
21000 TACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAAGAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
21065 AGTTTACACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCCTTTCTTTCAATGATTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
21128 GG-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAA
*
21190 AAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTGGA-TGAAACAAACA-AG
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
21252 G
315 G
* *
21253 ATTCTTATAATAATCTTCTTTCTTTCCATGATTAGGTAGACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCCATTTTGGGAT
21318 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* *
21383 GTTTACACTTTAAATGAGACAAACATGGATGTACG--AAAAAATCTCGTTTCTTTAAATGATTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTT-CATGATTGG
21446 G-CACCATAAACACGTTATCTTT-ATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTA-CTTTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* *
21508 AGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTGGA-CGAAACAAACA-AGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* *
21570 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACACATTCGCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGT-AACAAAACACATTCTCCATTTTGGGAT
21635 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* *
21700 GTTTATACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCAATTT-TTTCAATGATTA
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC--TTTCTTTC-ATGATTG
* * * * * * * *
21762 GG-CCCCATGAAGACGTTA-TCTTCGTTGGGATGCACAATATTGACGCATTGGTTTTGTA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAA
* * * * * * * * *
21824 AAGCTTTCCTTGCCACGATTTTCCTCATT-TTTTGAGTTCGGATGTT-AAATGAAAGAAGCA-TG
252 AAGCTTT-CTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
21886 G
315 G
* * * * * * * *
21887 ATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACACGTTTTCCTCTTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCC-ATTTTGGGA
* * * *
21952 TACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
* * * * *
22017 AGTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
*
22080 GG-CACCATAAACACGTTA-TCTTCATTGGGAGACACAATATTGATGAATTGGTTTTGAA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAA
*
22142 AAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTGGA-TGAAACAAACA-AG
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
22204 G
315 G
* *
22205 ATTCTTATAATAATCTTCACTCTTTCCATGATTAGGTAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGT-AACAAAACACATTCTCCATTTTGGGAT
*
22270 ACACGATATTAATGCCTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
*
22335 GTTTACACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCGTTTCTTTAAATGATTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTT-CATGATTGG
22398 G-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* ** *
22460 AGCTTTTCTTGCCATGACTTTCCTTA-TATTTTGAGTTCCTATGTTAGA-TGAAACAAACA-AGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* *
22522 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAA-CAAAACACATTCTCCATTTTGGGAT
* * * * *
22587 ACACGATATTAATGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTAACATTTTCCTTAGAATACAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* ** * **
22652 GTTTATACTTTAAATGAGACAAACATGGATGAACG--AAAAAATCTCAATTCTTTCAATGATTCA
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTC-ATGATTGG
* * *
22715 G-CACCATAAACAGGTTA-TATTCATT--GA--CGC---A-T--T--A--GTTTTGCA-AGAAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAAAA
* * * * * * *
22763 GCTCTTCTTCCCACGATTTTCCTTA-CATTTTGAGTTCGTACGTTAGA-TGAAACAAACA-TGG
254 GCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * * * *
22824 ATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACATATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * * * *
22889 ACATGATATTAATGCTTTGATTTCATTAAAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * *
22954 GTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGATTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
*
23017 G-CACCATAAACATGTTATCTTT-ATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTA-CTTTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* *
23079 AGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTGGA-CGAAACAAACA-AGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* *
23141 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACACATTCGCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGT-AACAAAACACATTCTCCATTTTGGGAT
23206 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* *
23271 GTTTATACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCAATTT-TTTCAATGATTA
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC--TTTCTTTC-ATGATTG
* * * * * * * *
23333 GG-CCCCATGAAGACGTTA-TCTTCGTTGGGATGCACAATATTGACGCATTGGTTTTGTA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAA
* * * * * * * * *
23395 AAGCTTTCCTTGCCACGATTTTCCTCATT-TTTTGAGTTCGGATGTT-AAATGAAAGAAGCA-TG
252 AAGCTTT-CTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
23457 G
315 G
* * * * * * * *
23458 ATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACACGTTTTCCTCTTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCC-ATTTTGGGA
* * * *
23523 TACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
* * * * *
23588 AGTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
*
23651 GG-CACCATAAACACGTTA-TCTTCATTGGGAGACACAATATTGATGAATTGGTTTTGAA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAA
*
23713 AAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTGGA-TGAAACAAACA-AG
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
23775 G
315 G
* *
23776 ATTCTTATAATAATCTTCACTCTTTCCATGATTAGGTAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGT-AACAAAACACATTCTCCATTTTGGGAT
*
23841 ACACGATATTAATGCCTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
*
23906 GTTTACACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCGTTTCTTTAAATGATTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTT-CATGATTGG
23969 G-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* ** *
24031 AGCTTTTCTTGCCATGACTTTCCTTA-TATTTTGAGTTCCTATGTTAGA-TGAAACAAACA-AGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* *
24093 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAA-CAAAACACATTCTCCATTTTGGGAT
* * * * *
24158 ACACGATATTAATGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTAACATTTTCCTTAGAATACAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* ** * **
24223 GTTTATACTTTAAATGAGACAAACATGGATGAACG--AAAAAATCTCAATTCTTTCAATGATTCA
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTC-ATGATTGG
* * *
24286 G-CACCATAAACAGGTTA-TATTCATT--GA--CGC---A-T--T--A--GTTTTGCA-AGAAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAAAA
* * * * * * *
24334 GCTCTTCTTCCCACGATTTTCCTTA-CATTTTGAGTTCGTACGTTAGA-TGAAACAAACA-TGG
254 GCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * * * *
24395 ATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACATATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * * * *
24460 ACATGATATTAATGCTTTGATTTCATTAAAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * * *
24525 GTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
* * *
24588 G-CACCATAAACGCGTTA-TCTTCATTTGGAGGCACAATATTAATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* * *
24650 AGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-ACG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * ** *
24712 TTTCTTATAATAGTCTTCATTCTTTCCATGATTAGACAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAG-GTAACAAAACACATTCTCCATTTTGGGAT
*
24777 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * * *
24842 GTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
24905 G-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTG-ACAGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* * * *
24967 AGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAAGAAACA-ACG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * *
25029 TTTCTTATATTAATCTTCATTC-TTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * *
25093 ACACGATATTAATGCTCTGATTTCGTGAGAAAATTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * *
25158 GTTCACACTTTAAATGAGACAAACATGGATCTACG--AAAGAATCTCCATTCTTTCAATGATTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
** * * * * * *
25221 G-CACCATAAACACGTTA-TCTTCATTGGGATACAGAAAATTGATGCATTGTTTTTGCA-AGAAG
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAAA
* * * ** * * * *
25283 AGCTTTTCTTGCCGCGATTTTCCTTA-CATTTTGTGTAAGTACGTTAGA-TAAAACAAACA-TGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * *
25345 ATTCTTATTATAATCTTCATTCTTTCCTTGATTAGGCAAACAAAACATC-TTCTCCTTTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACA-CATTCTCCATTTTGGGA
* * *
25409 TACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACTATTTTCCATAGAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
* * *
25474 AGTTTAAATTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCCATTCATTTAATGATT-
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTC-TTTCATGATTG
* * * *
25536 CGACACCATAAACAGGTTA-TATTCATT--GA--CGC-------AT---TGGTTTTGCA-AGAAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAAA
* * * * * *
25585 ATCTCTTCTTGCCATGATTTTCCTTA-CATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-TGA
253 AGCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * *
25647 ATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAAACACATTCT-CTTCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCAT-TTTGGGA
* * *
25711 TACACGATTTTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAAAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
* * *
25776 AGTTTATACTTTGAATGAGACAAACATGGATCTACG---AAAAATCTCAATTCTTTCAGTGATTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTCA-TGATTG
* * ** * * ** ** *
25838 GG-C-CCTCTGAGGACGTT-GTCTTCATTGGGATGCACAATATTGGCGCTTTGGTTTTGCA-AGA
189 GGACACC-ATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGA
* * * * * *
25899 AAAGCTTTCGTTGCCATGATTTTCCTCATT-TTTTGAGTTCGTATGTT-AAATGAAACAAGCA-T
251 AAAGCTTTC-TTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA
25961 GG
314 GG
* *** * * *
25963 ATTCTTATAAAAATCTTCATTCTTTCCATGATTACACATCCAAAACACGTTTTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCCAT-TTTGGGA
* * * * * * * *
26027 TACAGGATATCAAAGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTTCTGTAAAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTCCT-TAGAATAAA
* *
26092 AGTTTATACTTTAAATGAGACAAACATGGATCTACG---AAAAATCTCCATTCTTTCAATGATTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
* *
26154 GG-CACCATAAACACATTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAG
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAA
* *
26216 AAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-AG
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
26278 G
315 G
* * * * * *
26279 CTTCTTATAATAATCTTCATTCATTCCACGATTAGGCAAACAAAAAACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * * * *
26344 ACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGCCATTTTCCTTAGAAAAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * *
26409 GTTTACACTTTAAATGAGACAAACATGGATCTATG--AAAAAATCTCCATTCTTTCAATGATT-C
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
* ** * * * * *
26471 GACACCCTAAACACGTTA-TCTTCATTGGGATACAAAAAATTGATGCATTGGTTTTGCA-AGAAG
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAAA
** * * * * * *
26534 AGCTTTTCTTGCCACAATTTTCCTTA-CATTTTGTGTTCGTACGTT---CTGAAACAAACA-AGA
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * * * *
26594 ATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACATATTTTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* * * *
26659 ACATGATTTTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATACAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * *
26724 GTTTATACTTTAAATGAGACAAATATGGATCTACG--AAAAAATCTCCATTCTTTCAATGATTCG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
* * * * *
26787 G-CACCATAAATAGGCTA-TATTCATT--GA--CGC-------AT---TGGTTTTGCA-AGAAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAAAA
* * * * * *
26835 GCTCTTCTTCCCACGATTTTCCTTA-CATTTTGAGTTCGTATGTTAGA-TGAAA-AAA-ACATGA
254 GCT-TTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA-GG
* * *
26896 ATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAGACACATTCTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCAT-TTTGGGA
* * * * * *
26960 TGCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCATTAAAATAA
64 T--ACCGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAA
* * *
27024 AAGTTTATACTTTAAATGAGACAAACATGGATCTATG--AAAAAATCTCAATTCTTTCAGTGATT
126 AAGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTCA-TGATT
* * * * * * * * * *
27087 GGG-CCCCATGAAGACGTTA-TCTTCGTTGGGATGCATAATATTGACGCATTGGTTTCGTA-AGA
188 GGGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGA
* * * * * * * *
27149 AAAGCTTTCATTGCCACGATTTTCCTCATT-TTTTGAGTTCGGATGTT-AAATGAAACAAGCA-T
251 AAAGCTTTC-TTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACA
27211 GG
314 GG
* * * * * * * *
27213 ATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACACGTTTTCCTCTTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCC-ATTTTGGGA
* * * * *
27278 TACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAAGAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
27343 AGTTTACACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCCTTTCTTTCAATGATTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
27406 GG-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAA
*
27468 AAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTGGA-TGAAACAAACA-AG
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
27530 G
315 G
*
27531 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAGACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCCATTTTGGGAT
27596 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* *
27661 GTTTACACTTTAAATGAGACAAACATGGATGTACG--AAAAAATCTCGTTTCTTTAAATGATTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTT-CATGATTGG
27724 G-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* *
27786 AGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTGGA-CGAAACAAACA-AGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* *
27848 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACACATTCTCCTTTTTCGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGT-AACAAAACACATTCTCCATTTTGGGAT
27913 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
*
27978 GTTTATACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCAATTT-TTTCAATGATTG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC--TTTCTTTC-ATGATTG
* * * * * * * * *
28040 GG-CCCCATGAAGACATTA-TCTTCGTTGGGATGCACAATATTGACGCATTGGTTTTGTA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAA
* * * * * * * * *
28102 AAGCTTTCCTTGCCACGATTTTCCTCATT-TTTTGAGTTCGGATGTT-AAATGAAAGAAGCA-TG
252 AAGCTTT-CTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
28164 G
315 G
* * * * * * * *
28165 ATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACACGTTTTCCTCTTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCC-ATTTTGGGA
* * * *
28230 TACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
* * * * *
28295 AGTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
*
28358 GG-CACCATAAACACGTTA-TCTTCATTGGGAGACACAATATTGATGAATTGGTTTTGAA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAA
* *
28420 AAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-AG
252 AAGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
28482 G
315 G
* * *
28483 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTAGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
28548 ACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * *
28613 GTTTACACTTCAAATGAGACAAACATTGATGTACG--AAAAAATCTCGTTTCTTTAAATGATTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTT-CATGATTGG
28676 G-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* ** *
28738 AGCTTTTCTTGCCATGACTTTCCTTA-TATTTTGAGTTCCTATGTTAGA-TGAAACAAACA-AGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* *
28800 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAA-CAAAACACATTCTCCATTTTGGGAT
* * * * * * *
28865 GCACGATATTAATGTTTTGGTTTCGTCAGAAGAGTTTTTTCTCTACTATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * *
28930 GCTTATAC-TTTACATGAGACAAACATGGATCTACG--AAAAAATCTCCATTCTTTCAATGATTC
128 G-TT-TACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTG
* * *
28992 GG-CACCATAAACAGGTTA-TATTCATT--GA--CGC-------AT---TGGTTTTGCA-AGAAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAAA
* * * *
29040 AGCTCTTCTTTTCAC-GATTTTCCTTA-TATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-TG
253 AGCT-TTC-TTGC-CTGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
*
29101 A
315 G
*
29102 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCAT-TTTGGGA
* * * * * *
29166 TACAAGATATTAACGCTTTGATTTCTTGAGAAAAGTTTTTTCTCTACCATTTTCATTAAAATAAA
64 TAC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAA
* *
29231 AGTTTATACTTTAAATGAGACAAACATGGATCTACG--AAAAAATCTCAATTCTTTCAGTGATTG
127 AGTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTC-TTTCTTTCA-TGATTG
* * * * * * * *
29294 GG-CCCCATGAAGACGTTA-TCTTCGTTGGGATGCACAATATTGACGCATTGGTTTTGTA-AGAA
189 GGACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATG-AATGGTTTTGAACAGAA
* * * * * * * *
29356 AAGCTTTCCTTGCCACGATTTTCCTCATT-TTTTGAGTTCGGATGTT-AAATGAAACAAGCA-TG
252 AAGCTTT-CTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAG
29418 G
315 G
* * * * * * *
29419 ATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACACGTTTTCC-TCTTTGGGA
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTA-ACAAAACACATTCTCCAT-TTTGGGA
** * * * * *
29483 TAAAGATATTAATGTTTTGATTTCATTAGAAAAGATTTTTCTCTACCATTTTCCTTAGAATAAAA
64 TACCGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * * *
29548 GTTTATATTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
*
29611 G-CACCATAAACACGTTA-TCTTCATTGAGAGGCACAATATTGATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
* * *
29673 AGCTTTTCTTGCCATGATTTTCCTT-GTATTTTGAGTTCGTATGTTAGA-TGAAACAAACA-AGG
253 AGC-TTTCTTGCC-TGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
* * *
29735 ATTCTTATAATAATCTTCATTTTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGAT
1 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGG-TAACAAAACACATTCTCCATTTTGGGAT
* *
29800 ACACGATATTAATGCTTTGATTTCGTGAGAAAGGTTTTTTCTCTACCATTTTCCTTAGAATAAAA
65 AC-CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCA-TTTCCTTAGAATAAAA
* * * * *
29865 GTTTATACTTTAAATGAGACAAACATGGATCTAC--AGAAAAGTCTCCATTCTTTCAATGTTTGG
128 GTTTACA-TTTAAATGAGACAAACATGGATCTACGAAAAAAAATCT-CTTTCTTTC-ATGATTGG
29928 G-CACCATAAACACGTTA-TCTTCATTGGGAGGCACAATATTGATGAATTGGTTTTGAA-AGAAA
190 GACACCATAAACACGTTACT-TTCATTGGGAGGCACAATATTGATGAA-TGGTTTTGAACAGAAA
29990 AGCTTTTCTTGCC
253 AGC-TTTCTTGCC
30003 ATGTTGTAAA
Statistics
Matches: 18893, Mismatches: 2041, Indels: 2028
0.82 0.09 0.09
Matches are distributed among these distances:
285 1 0.00
286 9 0.00
287 9 0.00
288 14 0.00
289 46 0.00
290 51 0.00
291 31 0.00
292 13 0.00
293 30 0.00
294 11 0.00
295 14 0.00
296 26 0.00
297 21 0.00
298 43 0.00
299 49 0.00
300 114 0.01
301 473 0.03
302 2342 0.12
303 77 0.00
304 141 0.01
305 47 0.00
306 50 0.00
307 22 0.00
308 47 0.00
309 54 0.00
310 60 0.00
311 44 0.00
312 80 0.00
313 88 0.00
314 231 0.01
315 588 0.03
316 2161 0.11
317 7625 0.40
318 2059 0.11
319 379 0.02
320 393 0.02
321 194 0.01
322 266 0.01
323 301 0.02
324 172 0.01
325 114 0.01
326 86 0.00
327 105 0.01
328 78 0.00
329 47 0.00
330 9 0.00
331 22 0.00
332 1 0.00
333 6 0.00
334 17 0.00
335 19 0.00
336 13 0.00
ACGTcount: A:0.31, C:0.17, G:0.15, T:0.37
Consensus pattern (315 bp):
ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAACAAAACACATTCTCCATTTTGGGATA
CCGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTCCTTAGAATAAAAGTT
TACATTTAAATGAGACAAACATGGATCTACGAAAAAAAATCTCTTTCTTTCATGATTGGGACACC
ATAAACACGTTACTTTCATTGGGAGGCACAATATTGATGAATGGTTTTGAACAGAAAAGCTTTCT
TGCCTGATTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGAAACAAACACAGG
Found at i:9184 original size:326 final size:317
Alignment explanation
Indices: 8114--9206 Score: 833
Period size: 323 Copynumber: 3.4 Consensus size: 317
8104 AACGTTTCCT
* * * * *
8114 CTTTTGGGGATACACAGATATTAATGCTTTGATTTCAT-TGAAAAGTTTTTTCTCTACCATGTTC
1 CTTTT-GGGATACACCGATATTACTGTTTTGATTTCGTGAGAAAAGTTTTTTC-CTACCAT-TTC
* * * * *
8178 CTTCGAAGAACAGTTTACAC-TTA-AATGAAACAAACATGGATCTACGAAAAAAATCTC--CTTT
63 CTTAGAATAA-AGTTTATACATTACAATGAGACAAACATGGATGTACGAAAAAAATCTCATCTTT
** * * *
8239 CCTTCA-TGATTGGG-CAC-CTATAACACGTTTC-TTCATTGGGGAGGCCCAA-ATTGATGAATG
127 --TAAACTGATTGGGACACAATA-AACACGTTACTTTCATT-GGGAGGCACAATATTGATGAATG
* * ** * * * * * *
8299 GTTTT-CACAGACAAAGTTTTCCTGCTGATGATTTTCCTTATTATTTGGTCGTTTGTATTTTGGA
188 GTTTTGAACAG--AAAGCTTTATTGC--CTG-CTTTCCTTATTATTTTG-AGTTTGTATGTTAGA
** * *
8363 -TGAAAACAAACACAGGATT-TTTACTAATAATCTTC-TTCTTT-CAATGATT-AGGTAGACAAC
247 TTG--AACAAACACAGGATTCGGT--TAATAATCTTCATTCTTTCCCATGATTCAGGCA-ACAA-
8423 AACACATT-TCC
306 AACACATTCTCC
* * *
8434 ATTTTGGGATACA-CGATATTTCATGCTTTGATTTCGTGAGAAAAGTTTTTTTCCCTACCATTTC
1 CTTTTGGGATACACCGATATTAC-TGTTTTGATTTCGTGAGAAAAG-TTTTTT-CCTACCATTTC
* *
8498 TTTAG-ATAAAAG-TT-TACATTTACAATGAGACACAACATGGATCTACGAAAAAAAATTCTCGT
63 CTTAGAAT-AAAGTTTATACA-TTACAATGAGACA-AACATGGATGTACG-AAAAAAA-TCTC--
* ** * *
8560 TTCTTTTCTACTGATTGGGACACCATAAACACGTTACTTTCATTGGGAGGCACAATATTGCTGAA
121 ATCTTTTAAACTGATTGGGACACAATAAACACGTTACTTTCATTGGGAGGCACAATATTGATGAA
* * *
8625 TTGTTTTGAACAGAAAGCTTTATTGCCTGTTTTCCTTATTATTTTGAGTTTGTATGTTGGATTGA
186 TGGTTTTGAACAGAAAGCTTTATTGCCTGCTTTCCTTATTATTTTGAGTTTGTATGTTAGATTGA
** *
8690 TGAAACACAGGATTCGGTTAATAATCTTCATTCTTTCCCATGATTCAGGTAACAAAACACATTCT
251 ACAAACACAGGATTCGGTTAATAATCTTCATTCTTTCCCATGATTCAGGCAACAAAACACATTCT
*
8755 CT
316 CC
* *
8757 TTTTTGGGAGT--ACCGATATTCAATGTTTTGATTTCGTGAGAAAAGTTTTTTCCTTACCATTTT
1 CTTTTGGGA-TACACCGATATT-ACTGTTTTGATTTCGTGAGAAAAGTTTTTTCC-TACCA-TTT
* *
8820 CCTTAGAATAAACGTTTACACTTTACAGAT-AGACAAACATGGATGTATCGAAAAAATATCTCAT
62 CCTTAGAATAAA-GTTTATACATTACA-ATGAGACAAACATGGATGTA-CGAAAAAA-ATCTCAT
* * *
8884 C-TTTAAAGT-ATTGGGAC-CAATAAAACACGTTATTCTTCA-TGGGAGGCACAATATTGATGGC
123 CTTTTAAACTGATTGGGACACAAT-AAACACGTTACT-TTCATTGGGAGGCACAATATTGAT-GA
* *
8945 ATGGTTTTGAA-AGAAAAAGCTTTTCTTTCCATGACTTTCC-T-TTATTTTGAG-TTGTATGTTC
185 ATGGTTTTGAACAG--AAAGC-TTTATTGCC-TG-CTTTCCTTATTATTTTGAGTTTGTATGTT-
* *
9006 AGATTGAAACAAACA-AGGATGATTC-TTATAATAAT-TTCATT-TTTTCCATGATT-AGGCAAG
244 AGATTG-AACAAACACA-G--GATTCGGT-TAATAATCTTCATTCTTTCCCATGATTCAGGCAA-
9066 GCCAAAACACCA-TCTCC
303 --CAAAACA-CATTCTCC
*
9083 CTTTTGGGATTACACCGATATTACTGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTACCATTTCC
1 CTTTTGGGA-TACACCGATATTACTGTTTTGATTTCGTGAGAAAAGTTTTTTC-CTACCATTTCC
* *
9148 TTAGACATACAAGTTTATACATTA-AATGAGACAAACATGGATGAACGAACAAAATCTCA
64 TTAGA-ATA-AAGTTTATACATTACAATGAGACAAACATGGATGTACGAAAAAAATCTCA
9207 GATTCTTCAA
Statistics
Matches: 643, Mismatches: 67, Indels: 122
0.77 0.08 0.15
Matches are distributed among these distances:
317 2 0.00
318 8 0.01
319 30 0.05
320 65 0.10
321 60 0.09
322 63 0.10
323 106 0.16
324 75 0.12
325 40 0.06
326 71 0.11
327 85 0.13
328 34 0.05
329 4 0.01
ACGTcount: A:0.31, C:0.17, G:0.16, T:0.37
Consensus pattern (317 bp):
CTTTTGGGATACACCGATATTACTGTTTTGATTTCGTGAGAAAAGTTTTTTCCTACCATTTCCTT
AGAATAAAGTTTATACATTACAATGAGACAAACATGGATGTACGAAAAAAATCTCATCTTTTAAA
CTGATTGGGACACAATAAACACGTTACTTTCATTGGGAGGCACAATATTGATGAATGGTTTTGAA
CAGAAAGCTTTATTGCCTGCTTTCCTTATTATTTTGAGTTTGTATGTTAGATTGAACAAACACAG
GATTCGGTTAATAATCTTCATTCTTTCCCATGATTCAGGCAACAAAACACATTCTCC
Found at i:12343 original size:317 final size:317
Alignment explanation
Indices: 11517--30005 Score: 25391
Period size: 317 Copynumber: 58.9 Consensus size: 317
11507 TCGATTGATG
* *
11517 TAGATGAAAC-AACATGAATTCTTATAATAATC-TCATTCTTTCCATGATTAGGC-AACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
11579 CATTCTCCTCTTTGGGATACCAAGATATTAAACGCTCTGATTTCGTGAG-AAAGTTTTTTCTCTA
66 CATTCTCCTTTTTGGGATA-CACGATATT-AATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTA
* *
11643 CCATTTTCATTAAAATAAAA-TTTATACTTTAAAATGAGACAAACATGGATCTACG-AAAAATCT
129 CCATTTTCCTTAGAATAAAAGTTTATACTTT-AAATGAGACAAACATGGATCTACGAAAAAATCT
* * * * * * * * *
11706 CAATTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTCCGTTGGGATGCACAATATTGACT-C
193 CCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGA-TGA
* * * * * * *
11770 ATTGGTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTTGAGTACGGATTGT
257 ATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTA-TATTTTGAGTTCGTA-TGT
* * * * * **
11833 TAAATGAAACAAACATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTTACGCATCCAAAAC
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGA-TTAGGCAAACAAAAC
* * * * *
11898 ACGTTTTCCTCTTTTGGGATACAAGATATTTAATGCTTTGATTTCATTAG-AAAGTTTTTTCTCT
65 ACATTCTCCT-TTTTGGGATACACGATA-TTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCT
* *
11962 A-CATTTTCCTTAGAAGAAAAGTTTACACTTTAAATGAGGACAAACATGGATCTACGAAAAAATC
128 ACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGA-GACAAACATGGATCTACGAAAAAATC
* *
12026 TCCTTTCTTTCAATGATTGGGCACCAT-AACACGTTATCTTCATTGGGAGACACAATATTGATGA
192 TCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGA
12090 ATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
257 ATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
12151 TGGATGAAAC-AACAAGGATTCTTATAATAATCTTCACTCTTTTCCATGATTAGGTAAACAAAAC
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTC-TTTCCATGATTAGGCAAACAAAAC
* *
12215 ACATTCTCCTTTTTGGGATACCACGATATTAATGCCTTGATTTCGTGAGAAAAGTTTTTTCCCTA
65 ACATTCTCCTTTTTGGGATA-CACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTA
*
12280 CCATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTC
129 CCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTC
** *
12345 GTTTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
194 CATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
* *
12410 TGGTTTTGAAAG-AAAGCTTTTCTTGCCATATGACTTTCCTTATATTTTGAGTTCCTATGT
259 TGGTTTTGAAAGAAAAGCTTTTCTTGCC--ATGATTTTCCTTATATTTTGAGTTCGTATGT
*
12470 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
12535 CGTTCTCCTTTTTGGGATACACGATATTAATGTTTTTGGTTT-GTGAGGAAAAGTTTTTTCTCTA
66 CATTCTCCTTTTTGGGATACACGATATTAATG-CTTTGATTTCGTGA-GAAAAGTTTTTTCTCTA
* * * **
12599 ACATTTTCCTTAGAATACAAGTTTAAACTTTTAAATGAGACAAACATGGATGAACG-AAAAATCT
129 CCATTTTCCTTAGAATAAAAGTTTATAC-TTTAAATGAGACAAACATGGATCTACGAAAAAATCT
* ** * * *
12663 CAATTCTTTCAATGATTCAGCACCATTAAACAGGTTATATTCATT--GA--CGC---A-T--T--
193 CCATTCTTTCAATGATTGGGCACCA-TAAACACGTTATCTTCATTGGGAGGCACAATATTGATGA
* * * * * *
12716 A---GTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTACGT
257 ATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
12774 TAGATGAAACAAACATGGATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
12839 TATTCTCCTTTTT-GGATACACGATATTAATGCTTTGATTTCATTAAAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
12903 ATTTTCCTTAGAAT-AAAGTTTATACTTTAAATGAGAC-AACATGGAT-TAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
* * * *
12964 ATTCTTTCAATGTTTGGGCACCATAAACGCGTTATCTTCATTTGGAGGCACAATATTAATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
*
13029 GGTTTTGAAAGAAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTCTGT
260 GGTTTTGAAAG-AAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
13088 TAGATGAAACAAACAACGTTTCTTATAATAGTCTTCATTCTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
13153 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
13218 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
* *
13282 ATTCTTTCAATGTTTGGGCACCCCTAAACACGTTATCTTCATTGGGA-GCACAATATTGATGAAT
195 ATTCTTTCAATGATTGGGCA-CCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAA-
*
13346 TTGGTTTTGACAGAAAAGCTTTTCTTGCCATGATTTTCCTTATA-TTTGAGTTCGTATGT
258 TTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
13405 TAGATGAAAGAAACAACGTTTC-TATAATAATCTTCATTCATTCCATGATTAGGC-AACACAAA-
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACA-AAAC
* * *
13467 ACATTCTCCTTTTTGGGATACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGC
65 ACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
*
13532 CATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* ** * * *
13597 ATTCTTTCAATGATTCGGCACCATAAACACGTTATCTTCATTGGGATACAAAAAATTGATGCATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
* * * * * *
13662 GGTTTTGCAAGAAGAGCTTTTCTTGCCACGATTTTCCTTACATTTTGTGTTCGTACGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
13720 TAGATGAAACAAACAAGAATTCTTATTATAATCTTCATTCTTTCCAAGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
13785 TATTTTCCTTTTTGGGATACATGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* *
13850 ATTTTCCTTAGAATACAAGTTTATACTTTAAATGAGACAAATATGGATCTACGAAAAAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * * *
13915 TTCTTTCAATGATTCGGCACCATAAATAGGTTATATTCATT--GA--CGC---A-T--TG----G
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * *
13966 G-TTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
14022 TAGATGAAACAAACATGAATTC-TATAATAATCCTCATTCTTTCCATGATTAGGCAAACAAGACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
14086 CATTCTCCTCTTTGGGATCCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTAC
66 CATTCTCCTTTTTGGGATAC-ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* * * *
14150 CATTTTCATTAAAATAAAAGTTTATACTTTAAATGAGACAGACATGGATCTACGAAAAAATCTCA
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * * * * * * *
14215 ATTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTTCGTTGGGATGCACAATATTGACGCATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
* * * * * * *
14280 GGTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTCGAACGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * * * * **
14338 TAAATGAAACAAGCATGGATTCTTAAAAAAATCCTCATTCTTTCCATGATAACGCATCCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * * *
14403 CATTTTCCTCTTTGGGATACAAGATGTTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
14468 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
* * * * *
14532 ATTCTTTCAATGTTTGGGCACCATAAACGCGTTATCTTCCTTTGGAGGCACAATATTAATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
14597 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
14655 TAGATGAAACAAACAACGTTTCTTATAATAGTCTTCATTCTTTCCATGACTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
14720 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
14785 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
*
14849 ATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
*
14914 GGTTTTGACAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
14972 TAGATGAAACAAACAACGTTTCTTATATTAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
*
15037 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAAAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * *
15102 ATTTTCCTTAGAATAAAA-TTTCACACTTTAAATGAGAAAAACATGGATCTACGAAAGAATCTCC
131 ATTTTCCTTAGAATAAAAGTTT-ATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* ** * * *
15166 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCGTTGGGATACAGAAAATTGATGCATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
* * * ** * * ** *
15231 GTTTTTGCAAGAAGAGCTTTTCTTGCCGCGATTTTCCTTACATTTTGTGTAAGTACGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
15289 TAGATAAAACAAACATGGATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
15354 TC-TTCTGCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTCTTCTCTAC
66 -CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* * *
15418 TATTTTCCATAGAATAAAAGTTTGTACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * * * *
15483 ATTCATTT-AATGATTCGACACCATAAACAGGTTA---T-ATT--------C---ATTGACGCAT
195 ATTC-TTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
* * **
15532 TGGTTTTGCAAGAAAAGCTCTTCTTGCCATGATTTTCCTTACGTTTTGAGTTCGTATGT
259 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
15591 TAGATGAAACAAACATGAATTCTTATAATAATCTTCATTCTTTCCGTGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
15656 CATTCT-CTTCTTTGGGCTACACGATGTTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
66 CATTCTCCTT-TTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* *
15720 CATTTTCCTTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACG-AAAAATCTCA
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * * * ** * * ** **
15784 ATTCTTTCAGTGATTGGGCTCCCTGAGGACGTTGTCTTCATTGGGATGCACAATATTGGCGCTTT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
* * * *
15849 GGTTTTGCAAGAAAAGCTTTCCTTGCCATGATTTTCCTCATTTTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * ** **
15907 TAAATGAAA-AAAGCATGGATTCTTATAAAAATCTTAATTCTTTCCATGAGTACACATCCAAAAC
1 TAGATGAAACAAA-CAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAAC
* * * * * * * * *
15971 ACGTTTTCCTCTTTGGGATACAGGATATCAAAGCTTTGATTTCATTAGAAAAGTTTTTTCTTTAC
65 ACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* * *
16036 CATTTTCCGTAAAATAAAAGATTATACTTTAAATGAGACAAACATGGATCTACG-AAAAATCTCC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
*
16100 ATTCTTTCAATGATTGGGCACCATAAACACATTATCTTCATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
16165 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* *
16223 TAGATGAAACAAACAAGGGTTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAAAA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
16288 CATTCTCCTTTTTGGGATACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGCC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
16353 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* ** * * *
16418 TTCTTTCAATGATTCGGCACCATAAACACGTTATCTTCATTGGGATACAAAAAATTGATGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * * *
16483 GTTTTGCAAGAAGAGCTTTTCTTGCCACGATTTTCCTTACATTTTGTGTTCGTACGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
16540 TAGATGAAACAAACAAGAATTCTTATTATAATCTTCATTCCTTCCATGATTAGGCAAAGAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
16605 TATTTTCCTTTTTGGGATACATGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* *
16670 ATTTTCCTTAGAATACAAGTTTATACTTTAAATGAGACAAATATGGATCTACGAAAAAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * * *
16735 TTCTTTCAATGATTCGGCACCATAAATAGGTTA---T-ATT--------C---ATTGACGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * * *
16785 GTTTTGCAAGAAAAGCTCTCCTTCCCACGATTTTCCTTACATTTTGAGTTCGTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* *
16842 TAGATGAAACAAACATGAATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAA-AAAGAC
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAA-AC
* ** * *
16906 ACATTCTCCTCTTTGGGACCCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTA
65 ACATTCTCCTTTTTGGGATAC-ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTA
* *
16970 CCATTTTCATTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTC
129 CCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTC
* * * * * * * * * *
17035 AATTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTTCGTTAGGATGCACAATATTGACGCAT
194 CATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
* * * * *
17100 TGGTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTTATTTTTTGAGTTCGGATGT
259 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * * **
17159 TAAATGAAACAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * *
17224 CGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAG-AAAGTTTTTTCTCTAC
66 CATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* *
17288 CATTTTCCTTAGAAGAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* *
17353 TTTCCTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
* *
17418 GGTTTTCAAAGAAAAGCTTTTCCTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
17476 TGGATGAAACAAACAAGGATTTTTATAATAATCTTCATTCTTTCCATGATTAGGTAGACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
17541 CATTCTCCTTTCTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * *
17606 ATTTTCCTTAGATTAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAAATCTCG
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACG-AAAAAATCTCC
* *
17671 TTTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
*
17736 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTTGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
17794 TGGATGAAACAAACAAGGATTCGTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
17859 CATTCTCCTTTTTGGGATACACGATATTAATGTTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* *
17924 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATGTACGAAAAAATCT-CA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
*
17988 TTTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
196 -TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
*
18053 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGACTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
*
18111 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATT-TTTCCATGATTAGGCAAGCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
18175 CATTCTCCTTTTTGGGATACACGATATTAATGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * ** *
18240 ATTTTCCTTAGAATACAAGTTTATACATTAAATGAGACAAACATGGATGAACGAAAAAATCTCAA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
** * * *
18305 TTCTTTCAATGATTCAGCACCATAAACAGGTTA---T-ATT--------C---ATTGACGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * *
18355 GTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
18412 TAGATGAAACAAACATGGATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
18477 TATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * *
18542 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATAAGACAAACACGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
* * * *
18606 ATTCTTTCAATGTTTGGGCACCATAAACGCGTTATCTTCATTTGGAGGCACAATATTAATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
18671 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
18729 TAGATGAAACAAACAACGTTTCTTATTATAGTCTTCATTCTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
18794 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
18859 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
* *
18923 ATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCGTTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
* *
18988 GGTTTTGACAGAAAAGCTTTTTTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
19046 TAGATGAAACAAACAACGTTTCTTATATTAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
19111 CATTCTCCTTTTTGGGATACACGATAATAATGCTTTGATTTCGTGAGAAAATTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * * *
19176 ATTTTCCTTATAATAAAAGTTCACACTTTAAATGAGACAAACATGGATCTACGAAAGAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
** * * *
19241 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGATACAGAAAATTGATGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * ** * * ** *
19306 TTTTTGCAAGAAGAGCTTTTCTTGCCGCGATTTTCCTTACATTTTGTGTAAGTACGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
19363 TAGATAAAACAAACATGGATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
19428 CATTCTCCTTTTTGGGATACACGATATTAA-CCTTTTGGTTTCGTCAGAAGAGTTTTTTCTCTAC
66 CATTCTCCTTTTTGGGATACACGATATTAATGC-TTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* *
19492 TATTTTCCTTAGAATAAAAGCTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * * *
19557 ATTCTTTCAATGATTCGGCACCATAAACAGGTTA---T-ATT--------C---ATTGACGCATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
* * * * *
19607 GGTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCGTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
19665 TAGATGAAACAAACATGAATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAGACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
19730 CATTCTCCTCTTTGGGATCCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTAC
66 CATTCTCCTTTTTGGGATAC-ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
*
19794 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTC
* *
19858 CATTCTTTCAATGTTTGGGCACCCTAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
194 CATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
*
19923 TGGTTTTGACAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
259 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * *
19982 TAGATGAAAGAAACAACGTTTCTTATAATAATCTTCATTCATTCCATGATTAGGCAAACAAAAAA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
20047 CATTCTCCTTTTTGGGATACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGCC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
20112 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* ** * * *
20177 TTCTTTCAATGATTCGGCACCATAAACACGTTATCTTCATTGGGATACAAAAAATTGATGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * * *
20242 GTTTTGCAAGAAGAGCTTTTCTTGCCACGATTTTCCTTACATTTTGTGTTCGTACGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* *
20299 TAGATGAAAC-AACAAGAATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
20363 TATTTTCCTTTTTGAGATACATGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* *
20428 ATTTTCCTTAGAATACAAGTTTATACTTTAAATGAGACAAATATGGATCTACGAAAAAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * * * *
20493 TTCTTTCAATGATTCGGCACCATAAATA-G---GC-T-A-T---A--TAC---ATTGACGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * *
20543 GTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * *
20600 TAGATGAAAAAAACATGAATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAGACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
20665 CATTCTCCTCTTTGGGATCCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTAC
66 CATTCTCCTTTTTGGGATAC-ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* * * *
20729 CATTTTCATTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTATGAAAAAATCTCA
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * * * * * * * *
20794 ATTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTTCGTTGGGATGCATAATATTGACGCATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
** * * * * *
20859 GGTTTTCTAAGAAAAACTTTTCTTGCCACGATTTTCCTCATTTTTTGAGTTCGGATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * * **
20917 TAAATGAAACAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * *
20982 CGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTAC
66 CATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* *
21047 CATTTTCCTTAGAAGAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
*
21112 TTTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
21177 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
21235 TGGATGAAACAAACAAGGATTCTTATAATAATCTTCTTTCTTTCCATGATTAGGTAGACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
*
21300 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * **
21365 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATGTACGAAAAAATCTCGT
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* *
21430 TTCTTTAAATGATTGGGCACCATAAACACGTTATCTTTATTGGGAGGCACAATATTGATGAATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
21495 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
21552 TGGACGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
21617 CATTCGCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
21682 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCAA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * * * * * * *
21747 TTTTTTCAATGATTAGGCCCCATGAAGACGTTATCTTCGTTGGGATGCACAATATTGACGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * * *
21812 GTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTCGGATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * * * **
21869 TAAATGAAAGAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * *
21934 CGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTAC
66 CATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
*
21999 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTC
* *
22063 CATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGACACAATATTGATGAAT
194 CATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
22128 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
259 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
22187 TGGATGAAACAAACAAGGATTCTTATAATAATCTTCACTCTTTCCATGATTAGGTAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
22252 CATTCTCCTTTTTGGGATACACGATATTAATGCCTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* **
22317 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCGT
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
*
22382 TTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* *
22447 GTTTTGAAAGAAAAGCTTTTCTTGCCATGACTTTCCTTATATTTTGAGTTCCTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
*
22504 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
22569 CATTCTCCTTTTTGGGATACACGATATTAATGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTAAC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* ** *
22634 ATTTTCCTTAGAATACAAGTTTATACTTTAAATGAGACAAACATGGATGAACGAAAAAATCTCAA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
** * * *
22699 TTCTTTCAATGATTCAGCACCATAAACAGGTTATATTCATT--GA--CGC---A-T--T--A---
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * * *
22749 GTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTACGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
22806 TAGATGAAACAAACATGGATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * *
22871 TATTCTCCTTTTTGGGATACATGATATTAATGCTTTGATTTCATTAAAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
22936 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
* *
23000 ATTCTTTCAATGATTGGGCACCATAAACATGTTATCTTTATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
23065 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
23123 TGGACGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
23188 CATTCGCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
23253 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCAA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * * * * * * *
23318 TTTTTTCAATGATTAGGCCCCATGAAGACGTTATCTTCGTTGGGATGCACAATATTGACGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * * *
23383 GTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTCGGATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * * * **
23440 TAAATGAAAGAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * *
23505 CGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTAC
66 CATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
*
23570 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTC
* *
23634 CATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGACACAATATTGATGAAT
194 CATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
23699 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
259 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
23758 TGGATGAAACAAACAAGGATTCTTATAATAATCTTCACTCTTTCCATGATTAGGTAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
23823 CATTCTCCTTTTTGGGATACACGATATTAATGCCTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* **
23888 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCGT
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
*
23953 TTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* *
24018 GTTTTGAAAGAAAAGCTTTTCTTGCCATGACTTTCCTTATATTTTGAGTTCCTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
*
24075 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
24140 CATTCTCCTTTTTGGGATACACGATATTAATGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTAAC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* ** *
24205 ATTTTCCTTAGAATACAAGTTTATACTTTAAATGAGACAAACATGGATGAACGAAAAAATCTCAA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
** * * *
24270 TTCTTTCAATGATTCAGCACCATAAACAGGTTATATTCATT--GA--CGC---A-T--T--A---
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * * *
24320 GTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTACGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
24377 TAGATGAAACAAACATGGATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * *
24442 TATTCTCCTTTTTGGGATACATGATATTAATGCTTTGATTTCATTAAAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
24507 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
* * * *
24571 ATTCTTTCAATGTTTGGGCACCATAAACGCGTTATCTTCATTTGGAGGCACAATATTAATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
24636 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
24694 TAGATGAAACAAACAACGTTTCTTATAATAGTCTTCATTCTTTCCATGATTAGACAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
24759 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
24824 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
*
24888 ATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
*
24953 GGTTTTGACAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
25011 TAGATGAAAGAAACAACGTTTCTTATATTAATCTTCATTC-TTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
25075 CATTCTCCTTTTTGGGATACACGATATTAATGCTCTGATTTCGTGAGAAAATTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * *
25140 ATTTTCCTTAGAATAAAAGTTCACACTTTAAATGAGACAAACATGGATCTACGAAAGAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
** * * *
25205 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGATACAGAAAATTGATGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * ** * * ** *
25270 TTTTTGCAAGAAGAGCTTTTCTTGCCGCGATTTTCCTTACATTTTGTGTAAGTACGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
25327 TAGATAAAACAAACATGGATTCTTATTATAATCTTCATTCTTTCCTTGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
25392 TC-TTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
66 -CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* * * *
25456 TATTTTCCATAGAATAAAAGTTTAAATTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * * * *
25521 ATTCATTT-AATGATTCGACACCATAAACAGGTTA---T-ATT--------C---ATTGACGCAT
195 ATTC-TTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
* * * *
25570 TGGTTTTGCAAGAAAATCTCTTCTTGCCATGATTTTCCTTACATTTTGAGTTCGTATGT
259 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
25629 TAGATGAAACAAACATGAATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
*
25694 CATTCT-CTTCTTTGGGATACACGATTTTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
66 CATTCTCCTT-TTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* * *
25758 CATTTTCCTTAAAATAAAAGTTTATACTTTGAATGAGACAAACATGGATCTACG-AAAAATCTCA
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * * ** * * ** **
25822 ATTCTTTCAGTGATTGGGC-CCTCTGAGGACGTTGTCTTCATTGGGATGCACAATATTGGCGCTT
195 ATTCTTTCAATGATTGGGCACC-ATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
* * *
25886 TGGTTTTGCAAGAAAAGC-TTTCGTTGCCATGATTTTCCTCATTTTTTGAGTTCGTATGT
259 TGGTTTTGAAAGAAAAGCTTTTC-TTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * ** **
25945 TAAATGAAACAAGCATGGATTCTTATAAAAATCTTCATTCTTTCCATGATTACACATCCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * * * * *
26010 CGTTTTCCTCTTTGGGATACAGGATATCAAAGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
26075 ATTTT-CTGTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACG-AAAAATCTCC
131 ATTTTCCT-TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
*
26138 ATTCTTTCAATGATTGGGCACCATAAACACATTATCTTCATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
*
26203 GGTTTTGAAAGAGAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * *
26261 TAGATGAAACAAACAAGGCTTCTTATAATAATCTTCATTCATTCCACGATTAGGCAAACAAAAAA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
26326 CATTCTCCTTTTTGGGATACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGCC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * *
26391 ATTTTCCTTAGAAAAAAAGTTTACACTTTAAATGAGACAAACATGGATCTATGAAAAAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * ** * * *
26456 TTCTTTCAATGATTCGACACCCTAAACACGTTATCTTCATTGGGATACAAAAAATTGATGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * ** * * *
26521 GTTTTGCAAGAAGAGCTTTTCTTGCCACAATTTTCCTTACATTTTGTGTTCGTACGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
26578 T--CTGAAACAAACAAGAATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
26641 TATTTTCCTTTTTGGGATACATGATTTTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* *
26706 ATTTTCCTTAGAATACAAGTTTATACTTTAAATGAGACAAATATGGATCTACGAAAAAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * * * *
26771 TTCTTTCAATGATTCGGCACCATAAATAGGCTA---T-ATT--------C---ATTGACGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * *
26821 GTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * *
26878 TAGATGAAAAAAACATGAATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAGACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
26943 CATTCTCCTCTTTGGGATGCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTAC
66 CATTCTCCTTTTTGGGATAC-ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* * * *
27007 CATTTTCATTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTATGAAAAAATCTCA
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * * * * * * * *
27072 ATTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTTCGTTGGGATGCATAATATTGACGCATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
* * * * * *
27137 GGTTTCGTAAGAAAAGC-TTTCATTGCCACGATTTTCCTCATTTTTTGAGTTCGGATGT
260 GGTTTTGAAAGAAAAGCTTTTC-TTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * * **
27195 TAAATGAAACAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * *
27260 CGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTAC
66 CATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* *
27325 CATTTTCCTTAGAAGAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
*
27390 TTTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
27455 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
27513 TGGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAGACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
*
27578 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * **
27643 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATGTACGAAAAAATCTCGT
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
*
27708 TTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
27773 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
27830 TGGACGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
27895 CATTCTCCTTTTTCGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
27960 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCAA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * * * * * * *
28025 TTTTTTCAATGATTGGGCCCCATGAAGACATTATCTTCGTTGGGATGCACAATATTGACGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * * *
28090 GTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTCGGATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * * * **
28147 TAAATGAAAGAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * *
28212 CGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTAC
66 CATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
*
28277 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTC
130 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTC
* *
28341 CATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGACACAATATTGATGAAT
194 CATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAAT
28406 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
259 TGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
28465 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
28530 CATTCTCCTTTTTAGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * * * **
28595 ATTTTCCTTAGAATAAAAGTTTACACTTCAAATGAGACAAACATTGATGTACGAAAAAATCTCGT
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
*
28660 TTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* *
28725 GTTTTGAAAGAAAAGCTTTTCTTGCCATGACTTTCCTTATATTTTGAGTTCCTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
*
28782 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * * *
28847 CATTCTCCTTTTTGGGATGCACGATATTAATGTTTTGGTTTCGTCAGAAGAGTTTTTTCTCTACT
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* *
28912 ATTTTCCTTAGAATAAAAGCTTATACTTTACATGAGACAAACATGGATCTACGAAAAAATCTCCA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * *
28977 TTCTTTCAATGATTCGGCACCATAAACAGGTTA---T-ATT--------C---ATTGACGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * ** *
29027 GTTTTGCAAGAAAAGCTCTTCTTTTCACGATTTTCCTTATATTTTGAGTTCGTATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* *
29084 TAGATGAAACAAACATGAATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * *
29149 CATTCTCCTCTTTGGGATACAAGATATTAACGCTTTGATTTCTTGAGAAAAGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * *
29214 ATTTTCATTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCAA
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * * * * * *
29279 TTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTTCGTTGGGATGCACAATATTGACGCATTG
196 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
* * * * * *
29344 GTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTCGGATGT
261 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * * **
29401 TAAATGAAACAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * * * * *
29466 CGTTTTCCTCTTTGGGATA-AAGATATTAATGTTTTGATTTCATTAGAAAAGATTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* *
29530 ATTTTCCTTAGAATAAAAGTTTATATTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
* *
29594 ATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGAGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
*
29659 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTGTATTTTGAGTTCGTATGT
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
*
29717 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTTTTTCCATGATTAGGCAAACAAAACA
1 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
*
29782 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAGGTTTTTTCTCTACC
66 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
29847 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCC
131 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCC
*
29911 ATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
195 ATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
29976 GGTTTTGAAAGAAAAGCTTTTCTTGCCATG
260 GGTTTTGAAAGAAAAGCTTTTCTTGCCATG
30006 TTGTAAATTG
Statistics
Matches: 16138, Mismatches: 1741, Indels: 587
0.87 0.09 0.03
Matches are distributed among these distances:
298 18 0.00
299 37 0.00
300 85 0.01
301 435 0.03
302 2412 0.15
303 31 0.00
304 105 0.01
305 26 0.00
306 32 0.00
307 5 0.00
308 3 0.00
309 8 0.00
310 8 0.00
311 5 0.00
312 9 0.00
313 32 0.00
314 187 0.01
315 469 0.03
316 2123 0.13
317 7668 0.48
318 1950 0.12
319 233 0.01
320 216 0.01
321 41 0.00
ACGTcount: A:0.32, C:0.17, G:0.15, T:0.37
Consensus pattern (317 bp):
TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
Found at i:16290 original size:936 final size:940
Alignment explanation
Indices: 9240--30003 Score: 25028
Period size: 936 Copynumber: 22.0 Consensus size: 940
9230 AACCAGGTCT
* *
9240 ATATTGACGC-TTGGTTTTGACAA-AAAAGCTCTTCTT-CCACGATTTTCCTTATACTTTGATGT
1 ATATTGACGCATTGGTTTTGA-AAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGA-GT
* *
9302 TCGTATGTTCGATGAAACCAAAACATGGATTCTTATTAT-ATC-TCATTCTTTCCATGATCTA-G
64 TCGTATGTTAGATGAAA-C-AAACATGGATTCTTATAATAATCTTCATTCTTTCCATGAT-TAGG
* * *
9364 CAAA-AGAAACTATATTCTCC-TTTTGGGATTACACGATATTAAT-C-TTG-TTT-ATTA-AAAA
126 CAAACA-AAAC-ACATTCTCCTTTTTGGGA-TACACGATATTAATGCTTTGATTTCGTGAGAAAA
* *
9422 G-TTTTTCTCT-CCA-TTT-CTTAGAATAAAAGTTTATACTTTAAA-AAGGACAAACACGGAATC
188 GTTTTTTCTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGA-GACAAACATGG-ATC
* * * * *
9482 TAC-AGAAAGTC-CTCATTTCTTTCAATGTTTTGGGCACCATTAA-ACGCTTCTCTTCCATT-GG
251 TACGAAAAAATCTC-CA-TTCTTTCAATG-ATTGGGCACCATAAACACG-TTATCTT-CATTGGG
9543 AGGCAC-ATATT-ATTGAATTGGTTTTGAAAG-AAAGCTTTTCTTGCCATGCA-TTTCCTTATAT
311 AGGCACAATATTGA-TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATG-ATTTTCCTTATAT
* *
9604 TTTGAGTTCGTATGTTTTTTCAGATG-AACAAACAACGTTTCTTAT--TAAGTCTTCATTCTTTC
374 TTTGAGTTCGTATG----TT-AGATGAAACAAACAAGGATTCTTATAATAA-TCTTCATTCTTTC
9666 CATGATTAGGCAAACAACAACACATTCTCCTTTCTGTGGGCATACACGATATTAA-GCTTTGA-T
433 CATGATTAGGCAAACAA-AACACATTCTCCTTT-T-TGGG-ATACACGATATTAATGCTTTGATT
* * *
9729 TCGTGAGAAAAG--TTTTCTCTTCCATTTTCCTTAGAATAAAAGTTTCTACTTTAAATGAGTGCA
494 TCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAG-AC-
* * * * *
9792 AAACATGGAT-TAAG-AAAAGTCTCCCTTCTGTCAATGTTTGGGCACCATTCTAAACAACGTTAT
557 AAACATGGATCTACGAAAAAATCTCCATTCTTTCAATGATTGGGCACCA---TAAAC-ACGTTAT
** * * *
9855 GTC-TCGTGGGA-GGAGGCACCAAGTATGATGTTGTTG-ACAGAAAAGCTTGTTTTTGCCAGTGA
618 -TCAT--TGCAATTGATG---C-A-T-TG--GTT-TTGCA-AGAAAAGCTT-TTCTTGCCA-TGA
* * ** * * * *
9917 -TTTCC-TCTA-TTTGAGGTCGTA-GGGAGAGGAAACACAACAACG-TTGCTTAT-AT--GCTGC
668 TTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAACA-AACAAGGATT-CTTATAATAATCTTC
* *
9974 TATTCGGTTTCCA-G---AGGCAAACAAAACATCACGTTCGTCCGGGTTTTGGGA-ACACGATAA
731 -ATTC--TTTCCATGATTAGGCAAACAAAACA-CA--TTC-TCC--TTTTTGGGATACACGATAT
* *
10034 TAATG-TTTGATCTTGATTCGTGAGAAAATTTTTTTTCTCTACC-TTTT-CTTATAATAAAACGT
787 TAATGCTTTGA---T--TTCGTGAGAAAA-GTTTTTTCTCTACCATTTTCCTTAGAATAAAA-GT
* * * *
10096 TCACACTTTAAATGAGACAACAATCATGGATCTACGAAAAGCATCTCCATTCTTTCAATGCTTGG
845 TTATACTTTAAATGAGAC-A-AA-CATGGATCTACGAAAA-AATCTCCATTCTTTCAATGATTGG
* *
10161 GCACCATAAAACACGTTATC-TCA--GGGATACAGA
906 GCACCAT-AAACACGTTATCTTCATTGGGATGCACA
* * * * * * *
10194 AAATTGATGCATTGTTTTTGCAAGAAGAGCTTTTCTTTGCCGA-GATTTTCCTTACATTTTGTGT
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTC-TTGCC-ACGATTTTCCTTATATTTTGAGT
** * *
10258 AAGTACGTTTAGATATAAACCAAACA-GGATTCTTAT--TAATCTTCATTCTTTCCATGATTAGG
64 TCGTATG-TTAGAT-GAAA-CAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGG
* * * * * *
10320 CAAGCAAAACAC-TCCTTTCCTTTTTGGGAT-C-CGATATTAA-CCTTTGGTTTCGTCAG--GAG
126 CAAACAAAACACAT--TCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAG
* *
10379 TTTTTTCTCT---ATTTT-CTCTAG-ATAAAAGCTTATACTTTACATGAGGACAAACATGGAAT-
189 TTTTTTCTCTACCATTTTCCT-TAGAATAAAAGTTTATACTTTAAATGA-GACAAACATGG-ATC
* *
10438 TACG-AAAAATCTCCA-TCTTTCACATGATTCGGCACCATAAA-A-G-TATATTC-TT--GA--C
251 TACGAAAAAATCTCCATTCTTTCA-ATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGC
* * * *
10493 GC---A-TG--G---T--TTTTGCAAGAAAAG-TCTTT-TTCCCACGATTTTCCTTATA-TTTGA
315 ACAATATTGATGAATTGGTTTTGAAAGAAAAGCT-TTTCTTGCCATGATTTTCCTTATATTTTGA
* * *
10544 GTTCGTTATG-TAGATGAAACAAAACATGAATTCTTTATAATAATCTTC-TTCTTTCCCTGATTA
379 GTTCG-TATGTTAGATGAAAC-AAACAAGGATTC-TTATAATAATCTTCATTCTTTCCATGATTA
* * * * * * * * * *
10607 GCGCAAACCAAGGACA-ATTCTCCTCTTTGGTATGCCCCAACATTTAACAGC-CTGATTTCGAG-
441 G-GCAAA-CAA-AACACATTCTCCTTTTTGGGAT-ACACGATA-TTAA-TGCTTTGATTTCGTGA
* *
10669 GAAAA---TTTGCTCTACCATTTTCCTTAGCAATAAAAGTTTATACTTTAACTGAGA-AAA-ATT
500 GAAAAGTTTTTTCTCTACCATTTTCCTTAG-AATAAAAGTTTATACTTTAAATGAGACAAACA-T
** * *
10729 GGATCTAC-AGAAACGTCTCCATTCTTTCAATTTTG-TGGCTGGGCACCCTAACCACGTTATTTC
563 GGATCTACGA-AAAAATCTCCATTCTTTCAA---TGAT---TGGGCACCATAAACACGTTA--T-
* * *
10792 TCATTGGGAGGCACAACTAATGATGAATT-GTTTTGCGAGGAAAAGCGTTT-TTG-CATGATTTT
618 TCATT-----G--CAA-T--TGATGCATTGGTTTTGC-AAGAAAAGCTTTTCTTGCCATGATTTT
* * * * * *
10854 CCTTCT-TTGTGAGTTCGTA-G-TAGATGAAAGAAACAACGTTTCTTATATAAAAATCTTCATTC
672 CCTTATATTTTGAGTTCGTATGTTAGATGAAACAAACAAGGATTC-T-TATAATAATCTTCATTC
* * *
10916 ATTCC-TGATT-GGCAAACAAAA-A-ACT-TCCTTTTTGGGATACACAATATTATATTGCTTTGA
735 TTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGATACACGATATTA-A-TGCTTTGA
* *
10976 TTTCGTGAG-AAAGTTTTTTCTCTGCCATTTTCCTTAGAAATAAAAG-TTACACTTT-AATGAGA
798 TTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAG-AATAAAAGTTTATACTTTAAATGAGA
* * *
11038 CAAACCTGGGATCTACGAAAAAATGCTCCATTCTTTCAATGATTCGGCACCATTAACCCACGTCT
862 CAAACAT-GGATCTACGAAAAAAT-CTCCATTCTTTCAATGATTGGGCACCA-TAA-ACACG--T
* * *
11103 TATCTGCATTGGGATACAAA
921 TATCTTCATTGGGATGCACA
* * * * *
11123 AAATTGA-GCA-TGG-TTTGCAAGAAGAGCTTTTCTTGCCCACGATGTTTCCTTACCATTTTG-C
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTG-CCACGAT-TTTCCTTA-TATTTTGAG
* * * * * *
11184 TGTCGGACGTTTGATGAAAC-AACA-AGA-TCGTGGTATTATAATCTTCCTAGTCTTTCC-TGAT
63 T-TCGTATGTTAGATGAAACAAACATGGATTC-T--TATAATAATCTT-C-ATTCTTTCCATGAT
* * * *
11245 TCGGCAATACCAAAACA-ATTTTCCCTTTGTGGGAGATTTTTTTTAACATGATATTAATGCTTTG
122 TAGGCAA-A-CAAAACACATTCT-CCTTT-TTGG-GA-------T-ACACGATATTAATGCTTTG
*
11309 ATTTCTGTGAGAAAAG-TTTTTCTCTACCA-TTTCC-TAG-ATACAAG-TTATACTTT-AATGAG
174 ATTTC-GTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAG
* * * *
11368 AC-AATATGGATATACG-AAAAATACTCTACTTCTTTCAATGATTCGGG-ACCATAATAGGC-CC
238 ACAAACATGGATCTACGAAAAAAT-CTCCA-TTCTTTCAATGATT-GGGCACCATAA-A--CACG
* * * * * * ** *
11429 CTATATACATT--GA--CAGC--TATTG--G-TTTTGCTAAGAAAAAGAAAGCTCTTTCTT-CCA
297 TTATCTTCATTGGGAGGCA-CAATATTGATGAATTGGTTTTGAAAGA-AAAGCT-TTTCTTGCCA
* * * * *
11484 CGA-TTGCCTTAATTATTGTGAGTTCG-ATTGATGTAGATGAAAC-AACATGAATTCTTATAATA
359 TGATTTTCCTT-A-TATTTTGAGTTCGTA-TG-T-TAGATGAAACAAACAAGGATTCTTATAATA
* *
11546 ATC-TCATTCTTTCCATGATTAGGC-AACAAAACACATTCTCCTCTTTGGGATACCAAGATATTA
419 ATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGATA-CACGATATT-
* * * *
11609 AACGCTCTGATTTCGTGAG-AAAGTTTTTTCTCTACCATTTTCATTAAAATAAAA-TTTATACTT
482 AATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAAGTTTATACTT
* * * * *
11672 TAAAATGAGACAAACATGGATCTACG-AAAAATCTCAATTCTTTCAGTGATTGGGCCCCATGAAG
547 T-AAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCAATGATTGGGCACCATAAAC
* * *
11736 ACGTTATCTCCGTTGGGATGCACAATATTGACT-CATTGGTTTTGTAAGAAAAGCTTTCCTTGCC
611 ACGTTAT-T-C-AT----TG--C-A-ATTGA-TGCATTGGTTTTGCAAGAAAAGCTTTTCTTGCC
* * * * * * * *
11800 ACGATTTTCCTCATTTTTTTGAGTACGGATTGTTAAATGAAACAAACATGGATTCTTATAAAAAT
664 ATGATTTTCCTTA-TATTTTGAGTTCGTA-TGTTAGATGAAACAAACAAGGATTCTTATAATAAT
* * ** * * *
11865 CCTCATTCTTTCCATGATTTACGCATCCAAAACACGTTTTCCTCTTTTGGGATACAAGATATTTA
727 CTTCATTCTTTCCATGA-TTAGGCAAACAAAACACATTCTCCT-TTTTGGGATACACGATA-TTA
* * * *
11930 ATGCTTTGATTTCATTAG-AAAGTTTTTTCTCTA-CATTTTCCTTAGAAGAAAAGTTTACACTTT
789 ATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAAGTTTATACTTT
*
11993 AAATGAGGACAAACATGGATCTACGAAAAAATCTCCTTTCTTTCAATGATTGGGCACCAT-AACA
854 AAATGA-GACAAACATGGATCTACGAAAAAATCTCCATTCTTTCAATGATTGGGCACCATAAACA
12057 CGTTATCTTCATTGGGA-GACACA
918 CGTTATCTTCATTGGGATG-CACA
* * *
12080 ATATTGATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * * *
12145 GTATGTTGGATGAAAC-AACAAGGATTCTTATAATAATCTTCACTCTTTTCCATGATTAGGTAAA
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTC-TTTCCATGATTAGGCAAA
*
12209 CAAAACACATTCTCCTTTTTGGGATACCACGATATTAATGCCTTGATTTCGTGAGAAAAGTTTTT
130 CAAAACACATTCTCCTTTTTGGGATA-CACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTT
* *
12274 TCCCTACCATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAA
194 TCTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAA
** *
12339 AATCTCGTTTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTG
259 AATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTG
* *
12404 ATGAATTGGTTTTGAAAG-AAAGCTTTTCTTGCCATATGACTTTCCTTATATTTTGAGTTCCTAT
324 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCC--ATGATTTTCCTTATATTTTGAGTTCGTAT
*
12468 GTTAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAA
387 GTTAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAA
* * *
12533 CACGTTCTCCTTTTTGGGATACACGATATTAATGTTTTTGGTTT-GTGAGGAAAAGTTTTTTCTC
452 CACATTCTCCTTTTTGGGATACACGATATTAATG-CTTTGATTTCGTGA-GAAAAGTTTTTTCTC
* * * **
12597 TAACATTTTCCTTAGAATACAAGTTTAAACTTTTAAATGAGACAAACATGGATGAACG-AAAAAT
515 TACCATTTTCCTTAGAATAAAAGTTTATAC-TTTAAATGAGACAAACATGGATCTACGAAAAAAT
* ** * * *
12661 CTCAATTCTTTCAATGATTCAGCACCATTAAACAGGTTA-T-ATT-C-ATTGACGCATTAGTTTT
579 CTCCATTCTTTCAATGATTGGGCACCA-TAAACACGTTATTCATTGCAATTGATGCATTGGTTTT
* * * * *
12722 GCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTACGTTAGATGAAACAAA
643 GCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAACAAA
* * * * *
12787 CATGGATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACATATTCTCCTTTTT
708 CAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTT
* * *
12852 -GGATACACGATATTAATGCTTTGATTTCATTAAAAAAGTTTTTTCTCTACCATTTTCCTTAGAA
773 GGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAA
* *
12916 T-AAAGTTTATACTTTAAATGAGAC-AACATGGAT-TAC-AGAAAAGTCTCCATTCTTTCAATGT
838 TAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCCATTCTTTCAATGA
* * *
12977 TTGGGCACCATAAACGCGTTATCTTCATTTGGAGGCACA
902 TTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
13016 ATATTAATGAATTGGTTTTGAAAGAAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTT
1 ATATTGACGCATTGGTTTTGAAAG-AAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTT
* ** * *
13081 CGTCTGTTAGATGAAACAAACAACGTTTCTTATAATAGTCTTCATTCTTTCCATGATTAGGCAAA
65 CGTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAA
13146 CAAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
130 CAAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
13211 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAA
195 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAA
* * *
13275 AGTCTCCATTCTTTCAATGTTTGGGCACCCCTAAACACGTTATCTTCATTGGGA-GCACAATATT
259 AATCTCCATTCTTTCAATGATTGGGCA-CCATAAACACGTTATCTTCATTGGGAGGCACAATATT
*
13339 GATGAATTTGGTTTTGACAGAAAAGCTTTTCTTGCCATGATTTTCCTTATA-TTTGAGTTCGTAT
323 GATGAA-TTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTAT
* * * *
13403 GTTAGATGAAAGAAACAACGTTTC-TATAATAATCTTCATTCATTCCATGATTAGGC-AACACAA
387 GTTAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACA-AA
* *
13466 A-ACATTCTCCTTTTTGGGATACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCT
451 ACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCT
* *
13530 GCCATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCT
516 ACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCT
*
13595 CCATTCTTTCAATGATTCGGCACCATAAACACGTTATCTTCATTGGGATACAAAAAATTGATGCA
581 CCATTCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT--G---C----AATTGATGCA
* * * * *
13660 TTGGTTTTGCAAGAAGAGCTTTTCTTGCCACGATTTTCCTTACATTTTGTGTTCGTACGTTAGAT
635 TTGGTTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGAT
* * * * *
13725 GAAACAAACAAGAATTCTTATTATAATCTTCATTCTTTCCAAGATTAGGCAAACAAAACATATTT
700 GAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTC
*
13790 TCCTTTTTGGGATACATGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTT
765 TCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTT
* *
13855 CCTTAGAATACAAGTTTATACTTTAAATGAGACAAATATGGATCTACGAAAAAATCTCCATTCTT
830 CCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTT
* * *
13920 TCAATGATTCGGCACCATAAATAGGTTA---T-A-T----T---C-
895 TCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * * *
13953 --ATTGACGCATTGGGTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* *
14016 GTATGTTAGATGAAACAAACATGAATTC-TATAATAATCCTCATTCTTTCCATGATTAGGCAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* * * * *
14080 AAGACACATTCTCCTCTTTGGGATCCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTT
131 AAAACACATTCTCCTTTTTGGGATAC-ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
* * *
14144 CTCTACCATTTTCATTAAAATAAAAGTTTATACTTTAAATGAGACAGACATGGATCTACGAAAAA
195 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAA
* * * * * * *
14209 ATCTCAATTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTTCGTTGGGATGCACAATATTGA
260 ATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGA
* * * * * * * * *
14274 CGCATTGGTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTCGAACGTT
325 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
* * * * * * * * **
14339 AAATGAAACAAGCATGGATTCTTAAAAAAATCCTCATTCTTTCCATGATAACGCATCCAAAACAC
390 AGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACAC
* * * * * *
14404 ATTTTCCTCTTTGGGATACAAGATGTTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCA
455 ATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCA
*
14469 TTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCCA
520 TTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCCA
* * * * *
14533 TTCTTTCAATGTTTGGGCACCATAAACGCGTTATCTTCCTTTGGAGGCACAATATTAATGAATTG
584 TTCTTTCAATGATTGGGCACCATAAACACGTTA--TT-CATT----G--C-A-ATTGATGCATTG
*
14598 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAA
638 GTTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAA
* * * *
14663 ACAAACAACGTTTCTTATAATAGTCTTCATTCTTTCCATGACTAGGCAAACAAAACACATTCTCC
703 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCC
14728 TTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
768 TTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
*
14793 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCCATTCTTTC
833 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCCATTCTTTC
* *
14857 AATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACA
897 AATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
14901 ATATTGATGAATTGGTTTTGACAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
** * *
14966 GTATGTTAGATGAAACAAACAACGTTTCTTATATTAATCTTCATTCTTTCCATGATTAGGCAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
*
15031 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAAAAAAGTTTTTTC
131 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
* * *
15096 TCTACCATTTTCCTTAGAATAAAA-TTTCACACTTTAAATGAGAAAAACATGGATCTACGAAAGA
196 TCTACCATTTTCCTTAGAATAAAAGTTT-ATACTTTAAATGAGACAAACATGGATCTACGAAAAA
* ** * *
15160 ATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCGTTGGGATACAGAAAATTGA
260 ATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGA
* * * * ** * * ** *
15225 TGCATTGTTTTTGCAAGAAGAGCTTTTCTTGCCGCGATTTTCCTTACATTTTGTGTAAGTACGTT
325 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
* * *
15290 AGATAAAACAAACATGGATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACAT
390 AGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA-
* * *
15355 C-TTCTGCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTCTTCTCTACT
454 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* *
15419 ATTTTCCATAGAATAAAAGTTTGTACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
519 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* * * *
15484 TTCATTT-AATGATTCGACACCATAAACAGGTTA-T-ATT-C-ATTGACGCATTGGTTTTGCAAG
584 TTC-TTTCAATGATTGGGCACCATAAACACGTTATTCATTGCAATTGATGCATTGGTTTTGCAAG
* ** * *
15544 AAAAGCTCTTCTTGCCATGATTTTCCTTACGTTTTGAGTTCGTATGTTAGATGAAACAAACATGA
648 AAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAACAAACAAGG
* *
15609 ATTCTTATAATAATCTTCATTCTTTCCGTGATTAGGCAAACAAAACACATTCT-CTTCTTTGGGC
713 ATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTT-TTTGGGA
* *
15673 TACACGATGTTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAAAATAAA
777 TACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAA
* *
15738 AGTTTATACTTTAAATGAGACAAACATGGATCTACG-AAAAATCTCAATTCTTTCAGTGATTGGG
842 AGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCAATGATTGGG
* * * ** *
15802 CTCCCTGAGGACGTTGTCTTCATTGGGATGCACA
907 CACCATAAACACGTTATCTTCATTGGGATGCACA
* * * * * * *
15836 ATATTGGCGCTTTGGTTTTGCAAGAAAAGCTTTCCTTGCCATGATTTTCCTCATTTTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * * * ** **
15901 GTATGTTAAATGAAA-AAAGCATGGATTCTTATAAAAATCTTAATTCTTTCCATGAGTACACATC
66 GTATGTTAGATGAAACAAA-CATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAA
* * * * * * * *
15965 CAAAACACGTTTTCCTCTTTGGGATACAGGATATCAAAGCTTTGATTTCATTAGAAAAGTTTTTT
130 CAAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
* * * *
16030 CTTTACCATTTTCCGTAAAATAAAAGATTATACTTTAAATGAGACAAACATGGATCTACG-AAAA
195 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAA
*
16094 ATCTCCATTCTTTCAATGATTGGGCACCATAAACACATTATCTTCATTGGGAGGCACAATATTGA
260 ATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGA
16159 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
325 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
* *
16224 AGATGAAACAAACAAGGGTTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAAAAC
390 AGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACAC
* * *
16289 ATTCTCCTTTTTGGGATACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGCCA
455 ATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCA
*
16354 TTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCAT
520 TTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCAT
*
16419 TCTTTCAATGATTCGGCACCATAAACACGTTATCTTCATTGGGATACAAAAAATTGATGCATTGG
585 TCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT--G---C----AATTGATGCATTGG
* * * * *
16484 TTTTGCAAGAAGAGCTTTTCTTGCCACGATTTTCCTTACATTTTGTGTTCGTACGTTAGATGAAA
639 TTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAA
* * * * * *
16549 CAAACAAGAATTCTTATTATAATCTTCATTCCTTCCATGATTAGGCAAAGAAAACATATTTTCCT
704 CAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCT
*
16614 TTTTGGGATACATGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTT
769 TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTT
* *
16679 AGAATACAAGTTTATACTTTAAATGAGACAAATATGGATCTACGAAAAAATCTCCATTCTTTCAA
834 AGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCAA
* * *
16744 TGATTCGGCACCATAAATAGGTTA---T-A-T----T---C-
899 TGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * * *
16773 --ATTGACGCATTGGTTTTGCAAGAAAAGCTCTCCTTCCCACGATTTTCCTTACATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
*
16836 GTATGTTAGATGAAACAAACATGAATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAA-
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* ** * *
16900 AAAGACACATTCTCCTCTTTGGGACCCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTT
131 AAA-ACACATTCTCCTTTTTGGGATAC-ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTT
* *
16964 TCTCTACCATTTTCATTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAA
194 TCTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAA
* * * * * * * *
17029 AATCTCAATTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTTCGTTAGGATGCACAATATTG
259 AATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTG
* * * * * * *
17094 ACGCATTGGTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTTATTTTTTGAGTTCGGATGT
324 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * * * **
17159 TAAATGAAACAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACA
389 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * * * *
17224 CGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAG-AAAGTTTTTTCTCTAC
454 CATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* *
17288 CATTTTCCTTAGAAGAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
518 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * *
17353 TTTCCTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATT
583 ATTCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT-----G--C-A-ATTGATGCATT
* *
17418 GGTTTT-CAAAGAAAAGCTTTTCCTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTGGATG
637 GGTTTTGC-AAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATG
* * *
17482 AAACAAACAAGGATTTTTATAATAATCTTCATTCTTTCCATGATTAGGTAGACAAAACACATTCT
701 AAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCT
* *
17547 CCTTTCTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTC
766 CCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTC
* * **
17612 CTTAGATTAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAAATCTCGTTTCTT
831 CTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACG-AAAAAATCTCCATTCTT
* *
17677 TAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACA
895 TCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
17723 ATATTGATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTT
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * * *
17788 GTATGTTGGATGAAACAAACAAGGATTCGTATAATAATCTTCATTCTTTCCATGATTAGGTAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
*
17853 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGTTTTGATTTCGTGAGAAAAGTTTTTTC
131 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
* * *
17918 CCTACCATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATGTACGAAAAAA
196 TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAA
*
17983 TCT-CATTTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGA
261 TCTCCA-TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGA
*
18047 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGACTTTCCTTATATTTTGAGTTCGTATGTT
325 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
*
18112 AGATGAAACAAACAAGGATTCTTATAATAATCTTCATT-TTTCCATGATTAGGCAAGCAAAACAC
390 AGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACAC
* *
18176 ATTCTCCTTTTTGGGATACACGATATTAATGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTACCA
455 ATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCA
* * ** *
18241 TTTTCCTTAGAATACAAGTTTATACATTAAATGAGACAAACATGGATGAACGAAAAAATCTCAAT
520 TTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCAT
** * *
18306 TCTTTCAATGATTCAGCACCATAAACAGGTTA-T-ATT-C-ATTGACGCATTGGTTTTGCAAGAA
585 TCTTTCAATGATTGGGCACCATAAACACGTTATTCATTGCAATTGATGCATTGGTTTTGCAAGAA
* * * * *
18367 AAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTATGTTAGATGAAACAAACATGGAT
650 AAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAACAAACAAGGAT
* * * *
18432 TCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACATATTCTCCTTTTTGGGATAC
715 TCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGATAC
* *
18497 ACGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAAGT
780 ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAAGT
* * * *
18562 TTATACTTTAAATAAGACAAACACGGATCTAC-AGAAAAGTCTCCATTCTTTCAATGTTTGGGCA
845 TTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCCATTCTTTCAATGATTGGGCA
* * *
18626 CCATAAACGCGTTATCTTCATTTGGAGGCACA
909 CCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
18658 ATATTAATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
** * * *
18723 GTATGTTAGATGAAACAAACAACGTTTCTTATTATAGTCTTCATTCTTTCCATGATTAGGCAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
18788 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
131 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
18853 TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAA
196 TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAA
* * *
18917 GTCTCCATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCGTTGGGAGGCACAATATTGA
260 ATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGA
* *
18982 TGAATTGGTTTTGACAGAAAAGCTTTTTTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
325 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
* * *
19047 AGATGAAACAAACAACGTTTCTTATATTAATCTTCATTCTTTCCATGATTAGGCAAACAAAACAC
390 AGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACAC
* *
19112 ATTCTCCTTTTTGGGATACACGATAATAATGCTTTGATTTCGTGAGAAAATTTTTTTCTCTACCA
455 ATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCA
* * * *
19177 TTTTCCTTATAATAAAAGTTCACACTTTAAATGAGACAAACATGGATCTACGAAAGAATCTCCAT
520 TTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCAT
*
19242 TCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGATACAGAAAATTGATGCATTGT
585 TCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT--G---C----AATTGATGCATTGG
* ** * * ** * *
19307 TTTTGCAAGAAGAGCTTTTCTTGCCGCGATTTTCCTTACATTTTGTGTAAGTACGTTAGATAAAA
639 TTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAA
* * *
19372 CAAACATGGATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACACATTCTCCT
704 CAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCT
* * * * *
19437 TTTTGGGATACACGATATTAA-CCTTTTGGTTTCGTCAGAAGAGTTTTTTCTCTACTATTTTCCT
769 TTTTGGGATACACGATATTAATGC-TTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
*
19501 TAGAATAAAAGCTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCA
833 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCA
* *
19566 ATGATTCGGCACCATAAACAGGTTA---T-A-T----T---C-
898 ATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
19596 --ATTGACGCATTGGTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCGTATATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* *
19659 GTATGTTAGATGAAACAAACATGAATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* * * * *
19724 AAGACACATTCTCCTCTTTGGGATCCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTT
131 AAAACACATTCTCCTTTTTGGGATAC-ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
19788 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAA
195 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAA
* * *
19852 AGTCTCCATTCTTTCAATGTTTGGGCACCCTAAACACGTTATCTTCATTGGGAGGCACAATATTG
259 AATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTG
*
19917 ATGAATTGGTTTTGACAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
324 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * * * *
19982 TAGATGAAAGAAACAACGTTTCTTATAATAATCTTCATTCATTCCATGATTAGGCAAACAAAAAA
389 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* * *
20047 CATTCTCCTTTTTGGGATACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTGCC
454 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
*
20112 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
519 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
*
20177 TTCTTTCAATGATTCGGCACCATAAACACGTTATCTTCATTGGGATACAAAAAATTGATGCATTG
584 TTCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT--G---C----AATTGATGCATTG
* * * * *
20242 GTTTTGCAAGAAGAGCTTTTCTTGCCACGATTTTCCTTACATTTTGTGTTCGTACGTTAGATGAA
638 GTTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAA
* * * *
20307 AC-AACAAGAATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACATATTTTCC
703 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCC
* *
20371 TTTTTGAGATACATGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
768 TTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
* *
20436 TAGAATACAAGTTTATACTTTAAATGAGACAAATATGGATCTACGAAAAAATCTCCATTCTTTCA
833 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCA
* * *
20501 ATGATTCGGCACCATAAATA-G---GC-T-A-T---AT--AC-
898 ATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
20531 --ATTGACGCATTGGTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * *
20594 GTATGTTAGATGAAAAAAACATGAATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* * * * *
20659 AAGACACATTCTCCTCTTTGGGATCCAAC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTT
131 AAAACACATTCTCCTTTTTGGGATAC-ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
* * *
20723 CTCTACCATTTTCATTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTATGAAAAA
195 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAA
* * * * * * * *
20788 ATCTCAATTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTTCGTTGGGATGCATAATATTGA
260 ATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGA
* * ** * * * * *
20853 CGCATTGGTTTTCTAAGAAAAACTTTTCTTGCCACGATTTTCCTCATTTTTTGAGTTCGGATGTT
325 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
* * * * * * **
20918 AAATGAAACAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACAC
390 AGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACAC
* * * * *
20983 GTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACC
455 ATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * *
21048 ATTTTCCTTAGAAGAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCT
519 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
*
21113 TTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
584 TTCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT-----G--C-A-ATTGATGCATTG
* *
21178 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTGGATGAA
638 GTTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAA
* * *
21243 ACAAACAAGGATTCTTATAATAATCTTCTTTCTTTCCATGATTAGGTAGACAAAACACATTCTCC
703 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCC
*
21308 TTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCT
768 TTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
* * ** *
21373 TAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATGTACGAAAAAATCTCGTTTCTTTAA
833 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCA
* *
21438 ATGATTGGGCACCATAAACACGTTATCTTTATTGGGAGGCACA
898 ATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * *
21481 ATATTGATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * * *
21546 GTATGTTGGACGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
*
21611 AAAACACATTCGCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
131 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
*
21676 CCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAA
196 TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAA
* * * * * * * * *
21741 TCTCAATTTTTTCAATGATTAGGCCCCATGAAGACGTTATCTTCGTTGGGATGCACAATATTGAC
261 TCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGAT
* * * * * * *
21806 GCATTGGTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTCGGATGTTA
326 GAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTA
* * * * * * * ** *
21871 AATGAAAGAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACACG
391 GATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACA
* * * *
21936 TTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCA
456 TTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCA
*
22001 TTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCCA
520 TTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCCA
* *
22065 TTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGACACAATATTGATGAATTG
584 TTCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT----G---C-A-ATTGATGCATTG
* *
22130 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTGGATGAA
638 GTTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAA
* *
22195 ACAAACAAGGATTCTTATAATAATCTTCACTCTTTCCATGATTAGGTAAACAAAACACATTCTCC
703 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCC
* *
22260 TTTTTGGGATACACGATATTAATGCCTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCT
768 TTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
* ** *
22325 TAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCGTTTCTTTAA
833 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCA
*
22390 ATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACA
898 ATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
22433 ATATTGATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGACTTTCCTTATATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * *
22498 CTATGTTAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* *
22563 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGTTTTGGTTTCGTGAGAAAAGTTTTTTC
131 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
* * **
22628 TCTAACATTTTCCTTAGAATACAAGTTTATACTTTAAATGAGACAAACATGGATGAACGAAAAAA
196 TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAA
* ** * * *
22693 TCTCAATTCTTTCAATGATTCAGCACCATAAACAGGTTATATTCATT--GA--CGC---A-T--T
261 TCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGAT
* * * * * *
22748 --A---GTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTACGTTA
326 GAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTA
* * * * *
22808 GATGAAACAAACATGGATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAGAAAACATA
391 GATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACA
* * * *
22873 TTCTCCTTTTTGGGATACATGATATTAATGCTTTGATTTCATTAAAAAAGTTTTTTCTCTACCAT
456 TTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCAT
*
22938 TTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCCAT
521 TTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCCAT
* * *
23002 TCTTTCAATGATTGGGCACCATAAACATGTTATCTTTATTGGGAGGCACAATATTGATGAATTGG
585 TCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT-----G--C-A-ATTGATGCATTGG
* * *
23067 TTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTGGACGAAA
639 TTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAA
* *
23132 CAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACACATTCGCCT
704 CAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCT
*
23197 TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCTT
769 TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTT
* *
23262 AGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCAATTTTTTCAA
834 AGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCAA
* * * * *
23327 TGATTAGGCCCCATGAAGACGTTATCTTCGTTGGGATGCACA
899 TGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
23369 ATATTGACGCATTGGTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * * * * * * **
23434 GGATGTTAAATGAAAGAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* * * * *
23499 AAAACACGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTT
131 AAAACACATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
23564 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAA
195 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAA
* * *
23628 AGTCTCCATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGACACAATATTG
259 AATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTG
23693 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
324 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
23758 TGGATGAAACAAACAAGGATTCTTATAATAATCTTCACTCTTTCCATGATTAGGTAAACAAAACA
389 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
23823 CATTCTCCTTTTTGGGATACACGATATTAATGCCTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
454 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* **
23888 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCGT
519 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* *
23953 TTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
584 TTCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT-----G--C-A-ATTGATGCATTG
* * *
24018 GTTTTGAAAGAAAAGCTTTTCTTGCCATGACTTTCCTTATATTTTGAGTTCCTATGTTAGATGAA
638 GTTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAA
*
24083 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACACATTCTCC
703 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCC
* * *
24148 TTTTTGGGATACACGATATTAATGTTTTGGTTTCGTGAGAAAAGTTTTTTCTCTAACATTTTCCT
768 TTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
* ** *
24213 TAGAATACAAGTTTATACTTTAAATGAGACAAACATGGATGAACGAAAAAATCTCAATTCTTTCA
833 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCA
** *
24278 ATGATTCAGCACCATAAACAGGTTA---T-A-T----T---C-
898 ATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * * *
24308 --ATTGACGCATTAGTTTTGCAAGAAAAGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * * *
24371 GTACGTTAGATGAAACAAACATGGATTCTTATTATAATCCTCATTCTTTCCATGATTAGGCAAAG
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* * * * *
24436 AAAACATATTCTCCTTTTTGGGATACATGATATTAATGCTTTGATTTCATTAAAAAAGTTTTTTC
131 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
24501 TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAA
196 TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAA
* * * * *
24565 GTCTCCATTCTTTCAATGTTTGGGCACCATAAACGCGTTATCTTCATTTGGAGGCACAATATTAA
260 ATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGA
24630 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
325 TGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTT
* * * *
24695 AGATGAAACAAACAACGTTTCTTATAATAGTCTTCATTCTTTCCATGATTAGACAAACAAAACAC
390 AGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACAC
24760 ATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCA
455 ATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCA
*
24825 TTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCCA
520 TTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCCA
* *
24889 TTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
584 TTCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT-----G--C-A-ATTGATGCATTG
24954 GTTTTG-ACAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGA
638 GTTTTGCA-AGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGA
* * * *
25018 AAGAAACAACGTTTCTTATATTAATCTTCATTC-TTCCATGATTAGGCAAACAAAACACATTCTC
702 AACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTC
* *
25082 CTTTTTGGGATACACGATATTAATGCTCTGATTTCGTGAGAAAATTTTTTTCTCTACCATTTTCC
767 CTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCC
* * *
25147 TTAGAATAAAAGTTCACACTTTAAATGAGACAAACATGGATCTACGAAAGAATCTCCATTCTTTC
832 TTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTC
* *
25212 AATGATTGGGCACCATAAACACGTTATCTTCATTGGGATACAGA
897 AATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * * * * * * **
25256 AAATTGATGCATTGTTTTTGCAAGAAGAGCTTTTCTTGCCGCGATTTTCCTTACATTTTGTGTAA
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * * *
25321 GTACGTTAGATAAAACAAACATGGATTCTTATTATAATCTTCATTCTTTCCTTGATTAGGCAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
25386 AAAACATC-TTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
131 AAAACA-CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
* * * *
25450 CTCTACTATTTTCCATAGAATAAAAGTTTAAATTTTAAATGAGACAAACATGGATCTACGAAAAA
195 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAA
* * *
25515 ATCTCCATTCATTT-AATGATTCGACACCATAAACAGGTTA---T-ATT--------C---ATTG
260 ATCTCCATTC-TTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTG
* * * * * *
25564 ACGCATTGGTTTTGCAAGAAAATCTCTTCTTGCCATGATTTTCCTTACATTTTGAGTTCGTATGT
324 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
25629 TAGATGAAACAAACATGAATTCTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAAACA
389 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
*
25694 CATTCT-CTTCTTTGGGATACACGATTTTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
454 CATTCTCCTT-TTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTAC
* * *
25758 CATTTTCCTTAAAATAAAAGTTTATACTTTGAATGAGACAAACATGGATCTACG-AAAAATCTCA
518 CATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCC
* * * ** * ** *
25822 ATTCTTTCAGTGATTGGGC-CCTCTGAGGACGTTGTCTTCATTGGGATGCACAATATTGGCGCTT
583 ATTCTTTCAATGATTGGGCACC-ATAAACACG-T-TATTCA-T----TG--C-A-ATTGATGCAT
* * *
25886 TGGTTTTGCAAGAAAAGC-TTTCGTTGCCATGATTTTCCTCATTTTTTGAGTTCGTATGTTAAAT
636 TGGTTTTGCAAGAAAAGCTTTTC-TTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGAT
* * * ** ** * *
25950 GAAACAAGCATGGATTCTTATAAAAATCTTCATTCTTTCCATGATTACACATCCAAAACACGTTT
700 GAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTC
* * * * * *
26015 TCCTCTTTGGGATACAGGATATCAAAGCTTTGATTTCATTAGAAAAGTTTTTTCTCTACCATTTT
765 TCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTT
*
26080 -CTGTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACG-AAAAATCTCCATTCT
830 CCT-TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCT
* *
26143 TTCAATGATTGGGCACCATAAACACATTATCTTCATTGGGAGGCACA
894 TTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
26190 ATATTGATGAATTGGTTTTGAAAGAGAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * * *
26255 GTATGTTAGATGAAACAAACAAGGCTTCTTATAATAATCTTCATTCATTCCACGATTAGGCAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* * *
26320 AAAAAACATTCTCCTTTTTGGGATACACAATATTATTGCTTTGATTTCGTGAGAAAAGTTTTTTC
131 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
* * * *
26385 TCTGCCATTTTCCTTAGAAAAAAAGTTTACACTTTAAATGAGACAAACATGGATCTATGAAAAAA
196 TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAA
* * * ** * *
26450 TCTCCATTCTTTCAATGATTCGACACCCTAAACACGTTATCTTCATTGGGATACAAAAAATTGAT
261 TCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGAT
* * * ** * * *
26515 GCATTGGTTTTGCAAGAAGAGCTTTTCTTGCCACAATTTTCCTTACATTTTGTGTTCGTACGTT-
326 GAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTA
* * * *
26579 -CTGAAACAAACAAGAATTCTTATTATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACATA
391 GATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACA
* * *
26643 TTTTCCTTTTTGGGATACATGATTTTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCAT
456 TTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCAT
* *
26708 TTTCCTTAGAATACAAGTTTATACTTTAAATGAGACAAATATGGATCTACGAAAAAATCTCCATT
521 TTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATT
* * * * *
26773 CTTTCAATGATTCGGCACCATAAATAGGCTA-T-ATT-C-ATTGACGCATTGGTTTTGCAAGAAA
586 CTTTCAATGATTGGGCACCATAAACACGTTATTCATTGCAATTGATGCATTGGTTTTGCAAGAAA
* * * * * * *
26834 AGCTCTTCTTCCCACGATTTTCCTTACATTTTGAGTTCGTATGTTAGATGAAAAAAACATGAATT
651 AGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAACAAACAAGGATT
* * * *
26899 CTTATAATAATCTTCATTCTTTCCCTGATTAGGCAAACAAGACACATTCTCCTCTTTGGGATGCA
716 CTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGATAC-
* * * *
26964 AC-ATATTAACGCTCTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCATTAAAATAAAAGT
780 ACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAAGT
* * * *
27028 TTATACTTTAAATGAGACAAACATGGATCTATGAAAAAATCTCAATTCTTTCAGTGATTGGGCCC
845 TTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCAATGATTGGGCAC
* * * *
27093 CATGAAGACGTTATCTTCGTTGGGATGCATA
910 CATAAACACGTTATCTTCATTGGGATGCACA
* * * *
27124 ATATTGACGCATTGGTTTCGTAAGAAAAGC-TTTCATTGCCACGATTTTCCTCATTTTTTGAGTT
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTC-TTGCCACGATTTTCCTTATATTTTGAGTT
* * * * * * **
27188 CGGATGTTAAATGAAACAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATC
65 CGTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAA
* * * * *
27253 CAAAACACGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTT
130 CAAAACACATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTT
* *
27318 TCTCTACCATTTTCCTTAGAAGAAAAGTTTACACTTTAAATGAGACAAACATGGATCTACGAAAA
194 TCTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAA
*
27383 AATCTCCTTTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTG
259 AATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTG
27448 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
324 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
* * *
27513 TGGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAGACAAAACA
389 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
*
27578 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
454 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * **
27643 ATTTTCCTTAGAATAAAAGTTTACACTTTAAATGAGACAAACATGGATGTACGAAAAAATCTCGT
519 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* *
27708 TTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
584 TTCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT-----G--C-A-ATTGATGCATTG
* * *
27773 GTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTGGACGAA
638 GTTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAA
*
27838 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGTAAACAAAACACATTCTCC
703 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCC
* *
27903 TTTTTCGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACCATTTTCCT
768 TTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
* *
27968 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCAATTTTTTCA
833 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCA
* * * * *
28033 ATGATTGGGCCCCATGAAGACATTATCTTCGTTGGGATGCACA
898 ATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * * *
28076 ATATTGACGCATTGGTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
* * * * * * * **
28141 GGATGTTAAATGAAAGAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* * * * *
28206 AAAACACGTTTTCCTCTTTTGGGATACAAGATATTAATGCTTTGATTTCATTAGAAAAGTTTTTT
131 AAAACACATTCTCCT-TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTT
28271 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAA
195 CTCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAA
* * *
28335 AGTCTCCATTCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGACACAATATTG
259 AATCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTG
28400 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
324 ATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGT
28465 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
389 TAGATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACA
* *
28530 CATTCTCCTTTTTAGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCCCTACC
454 CATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACC
* * * * **
28595 ATTTTCCTTAGAATAAAAGTTTACACTTCAAATGAGACAAACATTGATGTACGAAAAAATCTCGT
519 ATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCA
* *
28660 TTCTTTAAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGATGAATTG
584 TTCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT-----G--C-A-ATTGATGCATTG
* * *
28725 GTTTTGAAAGAAAAGCTTTTCTTGCCATGACTTTCCTTATATTTTGAGTTCCTATGTTAGATGAA
638 GTTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAA
*
28790 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAGCAAAACACATTCTCC
703 ACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCC
* * * * * *
28855 TTTTTGGGATGCACGATATTAATGTTTTGGTTTCGTCAGAAGAGTTTTTTCTCTACTATTTTCCT
768 TTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCT
* *
28920 TAGAATAAAAGCTTATACTTTACATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCA
833 TAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCA
* *
28985 ATGATTCGGCACCATAAACAGGTTA---T-A-T----T---C-
898 ATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* * **
29015 --ATTGACGCATTGGTTTTGCAAGAAAAGCTCTTCTTTTCACGATTTTCCTTATATTTTGAGTTC
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
*
29078 GTATGTTAGATGAAACAAACATGAATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
66 GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
* * * *
29143 AAAACACATTCTCCTCTTTGGGATACAAGATATTAACGCTTTGATTTCTTGAGAAAAGTTTTTTC
131 AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
* *
29208 TCTACCATTTTCATTAAAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAA
196 TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAA
* * * * * * * *
29273 TCTCAATTCTTTCAGTGATTGGGCCCCATGAAGACGTTATCTTCGTTGGGATGCACAATATTGAC
261 TCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGAT
* * * * * * *
29338 GCATTGGTTTTGTAAGAAAAGCTTTCCTTGCCACGATTTTCCTCATTTTTTGAGTTCGGATGTTA
326 GAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTA
* * * * * * ** *
29403 AATGAAACAAGCATGGATTCTTATAAAAATCCTCATTCTTTCCATGATTACGCATCCAAAACACG
391 GATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACA
* * * * * * *
29468 TTTTCCTCTTTGGGATA-AAGATATTAATGTTTTGATTTCATTAGAAAAGATTTTTCTCTACCAT
456 TTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCAT
* *
29532 TTTCCTTAGAATAAAAGTTTATATTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCCAT
521 TTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCCAT
* *
29596 TCTTTCAATGTTTGGGCACCATAAACACGTTATCTTCATTGAGAGGCACAATATTGATGAATTGG
585 TCTTTCAATGATTGGGCACCATAAACACGTTA--TTCATT-----G--C-A-ATTGATGCATTGG
* *
29661 TTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTGTATTTTGAGTTCGTATGTTAGATGAAA
639 TTTTGCAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAA
*
29726 CAAACAAGGATTCTTATAATAATCTTCATTTTTTCCATGATTAGGCAAACAAAACACATTCTCCT
704 CAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCT
*
29791 TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAGGTTTTTTCTCTACCATTTTCCTT
769 TTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTT
*
29856 AGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTAC-AGAAAAGTCTCCATTCTTTCA
834 AGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGA-AAAAATCTCCATTCTTTCA
* *
29920 ATGTTTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACA
898 ATGATTGGGCACCATAAACACGTTATCTTCATTGGGATGCACA
* *
29963 ATATTGATGAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCA
1 ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCA
30004 TGTTGTAAAT
Statistics
Matches: 17514, Mismatches: 1754, Indels: 1088
0.86 0.09 0.05
Matches are distributed among these distances:
922 4 0.00
923 44 0.00
924 13 0.00
925 25 0.00
926 50 0.00
927 31 0.00
928 36 0.00
929 40 0.00
930 23 0.00
931 62 0.00
932 164 0.01
933 558 0.03
934 1167 0.07
935 3285 0.19
936 3748 0.21
937 1172 0.07
938 117 0.01
939 34 0.00
940 31 0.00
941 62 0.00
942 39 0.00
943 64 0.00
944 39 0.00
945 67 0.00
946 167 0.01
947 246 0.01
948 79 0.00
949 328 0.02
950 527 0.03
951 878 0.05
952 3310 0.19
953 51 0.00
954 122 0.01
955 95 0.01
956 194 0.01
957 241 0.01
958 60 0.00
959 81 0.00
960 92 0.01
961 30 0.00
962 47 0.00
963 64 0.00
964 24 0.00
965 3 0.00
ACGTcount: A:0.31, C:0.17, G:0.15, T:0.37
Consensus pattern (940 bp):
ATATTGACGCATTGGTTTTGAAAGAAAAGCTTTTCTTGCCACGATTTTCCTTATATTTTGAGTTC
GTATGTTAGATGAAACAAACATGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAAC
AAAACACATTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTC
TCTACCATTTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAA
TCTCCATTCTTTCAATGATTGGGCACCATAAACACGTTATCTTCATTGGGAGGCACAATATTGAT
GAATTGGTTTTGAAAGAAAAGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTA
GATGAAACAAACAAGGATTCTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACA
TTCTCCTTTTTGGGATACACGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCAT
TTTCCTTAGAATAAAAGTTTATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATT
CTTTCAATGATTGGGCACCATAAACACGTTATTCATTGCAATTGATGCATTGGTTTTGCAAGAAA
AGCTTTTCTTGCCATGATTTTCCTTATATTTTGAGTTCGTATGTTAGATGAAACAAACAAGGATT
CTTATAATAATCTTCATTCTTTCCATGATTAGGCAAACAAAACACATTCTCCTTTTTGGGATACA
CGATATTAATGCTTTGATTTCGTGAGAAAAGTTTTTTCTCTACCATTTTCCTTAGAATAAAAGTT
TATACTTTAAATGAGACAAACATGGATCTACGAAAAAATCTCCATTCTTTCAATGATTGGGCACC
ATAAACACGTTATCTTCATTGGGATGCACA
Found at i:33849 original size:2 final size:2
Alignment explanation
Indices: 33842--33871 Score: 60
Period size: 2 Copynumber: 15.0 Consensus size: 2
33832 GCATAGGGCA
33842 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
33872 CTTTAAAAGG
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 28 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:37103 original size:21 final size:21
Alignment explanation
Indices: 37065--37104 Score: 55
Period size: 21 Copynumber: 1.9 Consensus size: 21
37055 CCTTTCTTTT
*
37065 CAAAATTTTTATTTTATTCCC
1 CAAAATTTTTATTATATTCCC
37086 CAAAATGTTTTA-TATATTC
1 CAAAAT-TTTTATTATATTC
37105 TTTTATATTT
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
21 12 0.71
22 5 0.29
ACGTcount: A:0.33, C:0.15, G:0.03, T:0.50
Consensus pattern (21 bp):
CAAAATTTTTATTATATTCCC
Found at i:38480 original size:9 final size:10
Alignment explanation
Indices: 38440--38472 Score: 50
Period size: 10 Copynumber: 3.3 Consensus size: 10
38430 AACTGAAAAC
38440 TTTAATATA-A
1 TTTAATA-AGA
38450 TTTAATAAGA
1 TTTAATAAGA
38460 TTTAATAAGA
1 TTTAATAAGA
38470 TTT
1 TTT
38473 TAAAGATTAT
Statistics
Matches: 22, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
9 1 0.05
10 21 0.95
ACGTcount: A:0.45, C:0.00, G:0.06, T:0.48
Consensus pattern (10 bp):
TTTAATAAGA
Found at i:38689 original size:15 final size:15
Alignment explanation
Indices: 38669--38701 Score: 57
Period size: 15 Copynumber: 2.2 Consensus size: 15
38659 GTGATTTTTT
*
38669 AAAATATAATTGTTA
1 AAAATATAATTATTA
38684 AAAATATAATTATTA
1 AAAATATAATTATTA
38699 AAA
1 AAA
38702 GAAGTGAGAT
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 17 1.00
ACGTcount: A:0.61, C:0.00, G:0.03, T:0.36
Consensus pattern (15 bp):
AAAATATAATTATTA
Found at i:38767 original size:22 final size:24
Alignment explanation
Indices: 38731--38776 Score: 60
Period size: 23 Copynumber: 2.0 Consensus size: 24
38721 TTAAACATGT
*
38731 GAAAGTATTAATTAAAAT-TTTGA
1 GAAAGTATAAATTAAAATATTTGA
*
38754 GAAAGT-TAAATTAACATATTTGA
1 GAAAGTATAAATTAAAATATTTGA
38777 TTTATTAAAT
Statistics
Matches: 20, Mismatches: 2, Indels: 2
0.83 0.08 0.08
Matches are distributed among these distances:
22 9 0.45
23 11 0.55
ACGTcount: A:0.48, C:0.02, G:0.13, T:0.37
Consensus pattern (24 bp):
GAAAGTATAAATTAAAATATTTGA
Found at i:39054 original size:20 final size:21
Alignment explanation
Indices: 39029--39068 Score: 55
Period size: 20 Copynumber: 2.0 Consensus size: 21
39019 AACTGTAATT
*
39029 TAATTTGATAA-TAATTAAAA
1 TAATTTGAAAATTAATTAAAA
*
39049 TAATTTTAAAATTAATTAAA
1 TAATTTGAAAATTAATTAAA
39069 TTTCAATGAT
Statistics
Matches: 17, Mismatches: 2, Indels: 1
0.85 0.10 0.05
Matches are distributed among these distances:
20 9 0.53
21 8 0.47
ACGTcount: A:0.55, C:0.00, G:0.03, T:0.42
Consensus pattern (21 bp):
TAATTTGAAAATTAATTAAAA
Found at i:39706 original size:16 final size:16
Alignment explanation
Indices: 39685--39726 Score: 66
Period size: 16 Copynumber: 2.6 Consensus size: 16
39675 TCAATTTATA
* *
39685 TTTAAATTTTTTTGAG
1 TTTAAATTATTTCGAG
39701 TTTAAATTATTTCGAG
1 TTTAAATTATTTCGAG
39717 TTTAAATTAT
1 TTTAAATTAT
39727 AATAAATTTA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
16 24 1.00
ACGTcount: A:0.31, C:0.02, G:0.10, T:0.57
Consensus pattern (16 bp):
TTTAAATTATTTCGAG
Found at i:41532 original size:19 final size:21
Alignment explanation
Indices: 41486--41538 Score: 74
Period size: 19 Copynumber: 2.6 Consensus size: 21
41476 TTTCAATAAT
41486 TTGTATCGATACAAACAGTAA
1 TTGTATCGATACAAACAGTAA
* *
41507 ATGTATCGATACATA-AGT-A
1 TTGTATCGATACAAACAGTAA
41526 TTGTATCGATACA
1 TTGTATCGATACA
41539 GTGTATCGCT
Statistics
Matches: 29, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
19 13 0.45
20 3 0.10
21 13 0.45
ACGTcount: A:0.40, C:0.13, G:0.15, T:0.32
Consensus pattern (21 bp):
TTGTATCGATACAAACAGTAA
Found at i:41608 original size:13 final size:13
Alignment explanation
Indices: 41590--41615 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
41580 CATTATTCAA
41590 TGTATCGATACAT
1 TGTATCGATACAT
41603 TGTATCGATACAT
1 TGTATCGATACAT
41616 CGATCTTTGT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:41694 original size:20 final size:20
Alignment explanation
Indices: 41671--41708 Score: 67
Period size: 20 Copynumber: 1.9 Consensus size: 20
41661 ATACAATTTG
41671 CATTATATCGATACATTGCT
1 CATTATATCGATACATTGCT
*
41691 CATTGTATCGATACATTG
1 CATTATATCGATACATTG
41709 TAAAATGTAT
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
20 17 1.00
ACGTcount: A:0.29, C:0.18, G:0.13, T:0.39
Consensus pattern (20 bp):
CATTATATCGATACATTGCT
Found at i:41717 original size:20 final size:20
Alignment explanation
Indices: 41676--41727 Score: 70
Period size: 20 Copynumber: 2.6 Consensus size: 20
41666 ATTTGCATTA
* *
41676 TATCGATACATTGCTCATTG
1 TATCGATACATTGCTAAATG
41696 TATCGATACATTG-TAAAATG
1 TATCGATACATTGCT-AAATG
41716 TATCGATACATT
1 TATCGATACATT
41728 CAGGAATTTT
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
19 1 0.03
20 28 0.97
ACGTcount: A:0.33, C:0.15, G:0.13, T:0.38
Consensus pattern (20 bp):
TATCGATACATTGCTAAATG
Found at i:44130 original size:51 final size:51
Alignment explanation
Indices: 44072--44191 Score: 179
Period size: 51 Copynumber: 2.4 Consensus size: 51
44062 AATTTTTCTT
* *
44072 AATCGGGGATACTCCAACTCCGATTTTATTTCT-AAAGCATCAATTTACCAC
1 AATCGGGGATACTCCAACTCCGATTTTATTT-TAAAAACACCAATTTACCAC
**
44123 AATCGGGGATACTCCAACTCCGATTTTATTTTAAAAACACCAATTTTTCAC
1 AATCGGGGATACTCCAACTCCGATTTTATTTTAAAAACACCAATTTACCAC
*
44174 AATTGGGGATACTCCAAC
1 AATCGGGGATACTCCAAC
44192 CCCGTTATTT
Statistics
Matches: 63, Mismatches: 5, Indels: 2
0.90 0.07 0.03
Matches are distributed among these distances:
50 1 0.02
51 62 0.98
ACGTcount: A:0.33, C:0.24, G:0.12, T:0.31
Consensus pattern (51 bp):
AATCGGGGATACTCCAACTCCGATTTTATTTTAAAAACACCAATTTACCAC
Found at i:44210 original size:28 final size:28
Alignment explanation
Indices: 44178--44251 Score: 105
Period size: 28 Copynumber: 2.6 Consensus size: 28
44168 TTTCACAATT
*
44178 GGGGATACTCCAACCCCGTTATTTCAT-C
1 GGGGATACTCCAACCCCGTTATTTC-TGA
* *
44206 GGGGATACTCCAATCCCATTATTTCTGA
1 GGGGATACTCCAACCCCGTTATTTCTGA
44234 GGGGATACTCCAACCCCG
1 GGGGATACTCCAACCCCG
44252 ACTTTATATC
Statistics
Matches: 40, Mismatches: 5, Indels: 2
0.85 0.11 0.04
Matches are distributed among these distances:
27 1 0.03
28 39 0.98
ACGTcount: A:0.23, C:0.31, G:0.20, T:0.26
Consensus pattern (28 bp):
GGGGATACTCCAACCCCGTTATTTCTGA
Found at i:44330 original size:28 final size:28
Alignment explanation
Indices: 44290--44356 Score: 89
Period size: 28 Copynumber: 2.4 Consensus size: 28
44280 TAATCGGGGG
* **
44290 TACTCCAATCCCGTTATTTTTTAGAGCA
1 TACTCCAACCCCGTTATTTTCAAGAGCA
* *
44318 TACTCCAACCCCGTTATTTTCAAGGGGA
1 TACTCCAACCCCGTTATTTTCAAGAGCA
44346 TACTCCAACCC
1 TACTCCAACCC
44357 TGGCTTTATA
Statistics
Matches: 34, Mismatches: 5, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
28 34 1.00
ACGTcount: A:0.25, C:0.31, G:0.12, T:0.31
Consensus pattern (28 bp):
TACTCCAACCCCGTTATTTTCAAGAGCA
Found at i:44455 original size:28 final size:28
Alignment explanation
Indices: 44424--44493 Score: 95
Period size: 28 Copynumber: 2.5 Consensus size: 28
44414 TGTCATCGAT
* **
44424 GATACTCCAATCCCATTATTTTTGAGGG
1 GATACTCCAACCCCATTATTTCCGAGGG
*
44452 GATACTCTAACCCCATTATTTCCGAGGG
1 GATACTCCAACCCCATTATTTCCGAGGG
*
44480 GATACTCTAACCCC
1 GATACTCCAACCCC
44494 GGCTTTATAT
Statistics
Matches: 38, Mismatches: 4, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
28 38 1.00
ACGTcount: A:0.26, C:0.29, G:0.16, T:0.30
Consensus pattern (28 bp):
GATACTCCAACCCCATTATTTCCGAGGG
Found at i:44457 original size:108 final size:106
Alignment explanation
Indices: 44165--44465 Score: 386
Period size: 107 Copynumber: 2.8 Consensus size: 106
44155 AAAAACACCA
* * *
44165 ATTTTTCACAATTGGGGATACTCCAACCCCGTTATTTCATCGGGGATACTCCAATCCCATTATTT
1 ATTTTTCATAATCGGGGATACTCCAACCCCGTTATTTCATC-GAGATACTCCAATCCCATTATTT
*
44230 CTGAGGGGATACTCCAACCCCGACTTTATATCTAAAATATGG
65 TTGAGGGGATACTCCAACCCCGACTTTATATCTAAAATATGG
* * ** * * *
44272 ATTTTTCATAATCGGGGGTACTCCAATCCCGTTATTTTTTAGAGCATACTCCAACCCCGTTATTT
1 ATTTTTCATAATCGGGGATACTCCAACCCCGTTATTTCATCGAG-ATACTCCAATCCCATTATTT
** * *
44337 TCAAGGGGATACTCCAACCCTGGCTTTATATCTAAAATATGG
65 TTGAGGGGATACTCCAACCCCGACTTTATATCTAAAATATGG
* * * *
44379 ATTTTTTCATAATCGGGGTTATTCCAACCCCATTATGTCATCGATGATACTCCAATCCCATTATT
1 A-TTTTTCATAATCGGGGATACTCCAACCCCGTTATTTCATCGA-GATACTCCAATCCCATTATT
*
44444 TTTGAGGGGATACTCTAACCCC
64 TTTGAGGGGATACTCCAACCCC
44466 ATTATTTCCG
Statistics
Matches: 162, Mismatches: 29, Indels: 5
0.83 0.15 0.03
Matches are distributed among these distances:
106 2 0.01
107 90 0.56
108 69 0.43
109 1 0.01
ACGTcount: A:0.26, C:0.25, G:0.15, T:0.34
Consensus pattern (106 bp):
ATTTTTCATAATCGGGGATACTCCAACCCCGTTATTTCATCGAGATACTCCAATCCCATTATTTT
TGAGGGGATACTCCAACCCCGACTTTATATCTAAAATATGG
Found at i:44565 original size:28 final size:29
Alignment explanation
Indices: 44525--44597 Score: 105
Period size: 28 Copynumber: 2.6 Consensus size: 29
44515 ATTTTTCATA
44525 ATCGGGGATACTCCAACCCCGTTATGT-C
1 ATCGGGGATACTCCAACCCCGTTATGTCC
* *
44553 ATCGGGGATACTCCAATCCCGTTATTTCC
1 ATCGGGGATACTCCAACCCCGTTATGTCC
*
44582 A-AGGGGATACTCCAAC
1 ATCGGGGATACTCCAAC
44598 TCCGATTTTA
Statistics
Matches: 40, Mismatches: 4, Indels: 2
0.87 0.09 0.04
Matches are distributed among these distances:
28 38 0.95
29 2 0.05
ACGTcount: A:0.25, C:0.30, G:0.21, T:0.25
Consensus pattern (29 bp):
ATCGGGGATACTCCAACCCCGTTATGTCC
Found at i:44587 original size:135 final size:136
Alignment explanation
Indices: 44282--44597 Score: 445
Period size: 136 Copynumber: 2.3 Consensus size: 136
44272 ATTTTTCATA
* * * * * *
44282 ATCGGGGGTACTCCAATCCCGTTATTTTTTAGAGCATACTCCAACCCCGTTATTTTCAAGGGGAT
1 ATCGGGGATACTCCAATCCCGTTATTTTTAAGGGGATACTCCAACCCCATTATTTCCAAGGGGAT
* * *
44347 ACTCCAACCCTGGCTTTATATCTAAAATATGGATTTTTTCATAATCGGGGTTATTCCAACCCCAT
66 ACTCCAACCCCGGCTTTATATCTAAAATATGGATTTTTTCATAATCGGGGATACTCCAACCCCAT
44412 TATGTC
131 TATGTC
** * * * *
44418 ATCGATGATACTCCAATCCCATTATTTTTGAGGGGATACTCTAACCCCATTATTTCCGAGGGGAT
1 ATCGGGGATACTCCAATCCCGTTATTTTTAAGGGGATACTCCAACCCCATTATTTCCAAGGGGAT
* * *
44483 ACTCTAACCCCGGCTTTATATCTAAAATATTGA-TTTTTCATAATCGGGGATACTCCAACCCCGT
66 ACTCCAACCCCGGCTTTATATCTAAAATATGGATTTTTTCATAATCGGGGATACTCCAACCCCAT
44547 TATGTC
131 TATGTC
**
44553 ATCGGGGATACTCCAATCCCGTTATTTCCAAGGGGATACTCCAAC
1 ATCGGGGATACTCCAATCCCGTTATTTTTAAGGGGATACTCCAAC
44598 TCCGATTTTA
Statistics
Matches: 156, Mismatches: 24, Indels: 1
0.86 0.13 0.01
Matches are distributed among these distances:
135 72 0.46
136 84 0.54
ACGTcount: A:0.26, C:0.25, G:0.16, T:0.33
Consensus pattern (136 bp):
ATCGGGGATACTCCAATCCCGTTATTTTTAAGGGGATACTCCAACCCCATTATTTCCAAGGGGAT
ACTCCAACCCCGGCTTTATATCTAAAATATGGATTTTTTCATAATCGGGGATACTCCAACCCCAT
TATGTC
Found at i:44615 original size:107 final size:107
Alignment explanation
Indices: 44449--44679 Score: 272
Period size: 107 Copynumber: 2.2 Consensus size: 107
44439 TTATTTTTGA
* * * * * *
44449 GGGGATACTCTAACCCCATTATTTCCGAGGGGATACTCTAACCCCGGCTTTATATCTAAAATATT
1 GGGGATACTCCAACCCCATTATTTCCAAGGGGATACTCCAACCCCGACTTTATATCTAAAACACT
*
44514 GATTTT-TCATAATCGGGGATACTCCAACCCCGTTATGTCATC
66 GATTTTCT-ATAATCAGGGATACTCCAACCCCGTTATGTCATC
* * * *
44556 GGGGATACTCCAATCCCGTTATTTCCAAGGGGATACTCCAACTCCGATTTTAT-TCCTAAAACAC
1 GGGGATACTCCAACCCCATTATTTCCAAGGGGATACTCCAACCCCGACTTTATAT-CTAAAACAC
* * *
44620 TGATTTTCTATAATCAGGGATACTCCAATCCTGTTAT-T-TTC
65 TGATTTTCTATAATCAGGGATACTCCAACCCCGTTATGTCATC
44661 GAGGGAATACTCCAACCCC
1 G-GGG-ATACTCCAACCCC
44680 GATTTTTATT
Statistics
Matches: 105, Mismatches: 15, Indels: 8
0.82 0.12 0.06
Matches are distributed among these distances:
105 3 0.03
106 5 0.05
107 96 0.91
108 1 0.01
ACGTcount: A:0.27, C:0.26, G:0.16, T:0.31
Consensus pattern (107 bp):
GGGGATACTCCAACCCCATTATTTCCAAGGGGATACTCCAACCCCGACTTTATATCTAAAACACT
GATTTTCTATAATCAGGGATACTCCAACCCCGTTATGTCATC
Found at i:47772 original size:16 final size:16
Alignment explanation
Indices: 47753--47804 Score: 61
Period size: 16 Copynumber: 3.3 Consensus size: 16
47743 AATCTTAAAC
*
47753 TAAAGTAATTTAAATT
1 TAAAATAATTTAAATT
* *
47769 TAAAATAACTTAAACT
1 TAAAATAATTTAAATT
*
47785 CAAAATAATTTAAA-T
1 TAAAATAATTTAAATT
47800 TAAAA
1 TAAAA
47805 AATAAACTAA
Statistics
Matches: 30, Mismatches: 6, Indels: 1
0.81 0.16 0.03
Matches are distributed among these distances:
15 5 0.17
16 25 0.83
ACGTcount: A:0.58, C:0.06, G:0.02, T:0.35
Consensus pattern (16 bp):
TAAAATAATTTAAATT
Found at i:47797 original size:32 final size:31
Alignment explanation
Indices: 47746--47805 Score: 93
Period size: 32 Copynumber: 1.9 Consensus size: 31
47736 AAATTTTAAT
* *
47746 CTTAAACTAAAGTAATTTAAATTTAAAATAA
1 CTTAAACTAAAATAATTTAAATTAAAAATAA
47777 CTTAAACTCAAAATAATTTAAATTAAAAA
1 CTTAAACT-AAAATAATTTAAATTAAAAA
47806 ATAAACTAAA
Statistics
Matches: 26, Mismatches: 2, Indels: 1
0.90 0.07 0.03
Matches are distributed among these distances:
31 8 0.31
32 18 0.69
ACGTcount: A:0.57, C:0.08, G:0.02, T:0.33
Consensus pattern (31 bp):
CTTAAACTAAAATAATTTAAATTAAAAATAA
Found at i:47980 original size:15 final size:15
Alignment explanation
Indices: 47962--47993 Score: 64
Period size: 15 Copynumber: 2.1 Consensus size: 15
47952 TTAATCACCG
47962 TCGTCGTCATCATCA
1 TCGTCGTCATCATCA
47977 TCGTCGTCATCATCA
1 TCGTCGTCATCATCA
47992 TC
1 TC
47994 ATAATTTGAT
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 17 1.00
ACGTcount: A:0.19, C:0.34, G:0.12, T:0.34
Consensus pattern (15 bp):
TCGTCGTCATCATCA
Found at i:47981 original size:18 final size:18
Alignment explanation
Indices: 47955--47995 Score: 64
Period size: 18 Copynumber: 2.3 Consensus size: 18
47945 ATTTAGTTTA
* *
47955 ATCACCGTCGTCGTCATC
1 ATCATCGTCGTCATCATC
47973 ATCATCGTCGTCATCATC
1 ATCATCGTCGTCATCATC
47991 ATCAT
1 ATCAT
47996 AATTTGATGT
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
18 21 1.00
ACGTcount: A:0.22, C:0.34, G:0.12, T:0.32
Consensus pattern (18 bp):
ATCATCGTCGTCATCATC
Found at i:49004 original size:20 final size:20
Alignment explanation
Indices: 48979--49045 Score: 89
Period size: 20 Copynumber: 3.3 Consensus size: 20
48969 TCAAATTTAA
*
48979 AAAATTATTTAAATTAATTT
1 AAAATTAATTAAATTAATTT
*
48999 AAAATTAAATTAAGTTAATTT
1 AAAATT-AATTAAATTAATTT
* *
49020 TAAATTAATTAAAATAATTT
1 AAAATTAATTAAATTAATTT
49040 AAAATT
1 AAAATT
49046 TAAAAATTTA
Statistics
Matches: 40, Mismatches: 6, Indels: 2
0.83 0.12 0.04
Matches are distributed among these distances:
20 23 0.57
21 17 0.43
ACGTcount: A:0.54, C:0.00, G:0.01, T:0.45
Consensus pattern (20 bp):
AAAATTAATTAAATTAATTT
Found at i:49008 original size:16 final size:15
Alignment explanation
Indices: 48987--49034 Score: 60
Period size: 16 Copynumber: 3.1 Consensus size: 15
48977 AAAAAATTAT
48987 TTAAATTAATTTAAAA
1 TTAAATTAA-TTAAAA
**
49003 TTAAATTAAGTTAATT
1 TTAAATTAA-TTAAAA
49019 TTAAATTAATTAAAA
1 TTAAATTAATTAAAA
49034 T
1 T
49035 AATTTAAAAT
Statistics
Matches: 27, Mismatches: 5, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
15 5 0.19
16 22 0.81
ACGTcount: A:0.52, C:0.00, G:0.02, T:0.46
Consensus pattern (15 bp):
TTAAATTAATTAAAA
Found at i:50667 original size:23 final size:22
Alignment explanation
Indices: 50641--50684 Score: 70
Period size: 23 Copynumber: 2.0 Consensus size: 22
50631 TAAGAAGAAA
50641 AAAGGGAAAAAAGAAAGAAAGAG
1 AAAGGGAAAAAA-AAAGAAAGAG
*
50664 AAAGGGAAAAAAAGAGAAAGA
1 AAAGGGAAAAAAAAAGAAAGA
50685 AATTGTTAGG
Statistics
Matches: 20, Mismatches: 1, Indels: 1
0.91 0.05 0.05
Matches are distributed among these distances:
22 8 0.40
23 12 0.60
ACGTcount: A:0.70, C:0.00, G:0.30, T:0.00
Consensus pattern (22 bp):
AAAGGGAAAAAAAAAGAAAGAG
Found at i:50672 original size:16 final size:16
Alignment explanation
Indices: 50653--50683 Score: 53
Period size: 16 Copynumber: 1.9 Consensus size: 16
50643 AGGGAAAAAA
*
50653 GAAAGAAAGAGAAAGG
1 GAAAAAAAGAGAAAGG
50669 GAAAAAAAGAGAAAG
1 GAAAAAAAGAGAAAG
50684 AAATTGTTAG
Statistics
Matches: 14, Mismatches: 1, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
16 14 1.00
ACGTcount: A:0.68, C:0.00, G:0.32, T:0.00
Consensus pattern (16 bp):
GAAAAAAAGAGAAAGG
Found at i:50998 original size:20 final size:19
Alignment explanation
Indices: 50975--51046 Score: 90
Period size: 20 Copynumber: 3.7 Consensus size: 19
50965 CACACCCAGA
*
50975 TGTATCGATACATCTTGCTT
1 TGTATCGATACATCTT-CAT
50995 TGTATCGATACATCTTCAT
1 TGTATCGATACATCTTCAT
***
51014 TGTATCGATACATGGACAAT
1 TGTATCGATACATCTTC-AT
51034 TGTATCGATACAT
1 TGTATCGATACAT
51047 GAAACTGGCA
Statistics
Matches: 47, Mismatches: 4, Indels: 2
0.89 0.08 0.04
Matches are distributed among these distances:
19 16 0.34
20 31 0.66
ACGTcount: A:0.28, C:0.18, G:0.15, T:0.39
Consensus pattern (19 bp):
TGTATCGATACATCTTCAT
Found at i:61810 original size:13 final size:13
Alignment explanation
Indices: 61792--61818 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
61782 ACATCTTACT
61792 TTGTATCGATACA
1 TTGTATCGATACA
61805 TTGTATCGATACA
1 TTGTATCGATACA
61818 T
1 T
61819 GTTCATTGTA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.30, C:0.15, G:0.15, T:0.41
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:61815 original size:33 final size:32
Alignment explanation
Indices: 61773--61837 Score: 103
Period size: 32 Copynumber: 2.0 Consensus size: 32
61763 CACACCCAGA
*
61773 TGTATCGATACATCTTACTTTGTATCGATACAT
1 TGTATCGATACATCTT-CATTGTATCGATACAT
*
61806 TGTATCGATACATGTTCATTGTATCGATACAT
1 TGTATCGATACATCTTCATTGTATCGATACAT
61838 GGACAATTGT
Statistics
Matches: 30, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 15 0.50
33 15 0.50
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.42
Consensus pattern (32 bp):
TGTATCGATACATCTTCATTGTATCGATACAT
Found at i:61848 original size:20 final size:19
Alignment explanation
Indices: 61802--61858 Score: 87
Period size: 19 Copynumber: 2.9 Consensus size: 19
61792 TTGTATCGAT
*
61802 ACATTGTATCGATACATGT
1 ACATTGTATCGATACATGG
*
61821 TCATTGTATCGATACATGG
1 ACATTGTATCGATACATGG
61840 ACAATTGTATCGATACATG
1 AC-ATTGTATCGATACATG
61859 AAACTAGTAG
Statistics
Matches: 34, Mismatches: 3, Indels: 1
0.89 0.08 0.03
Matches are distributed among these distances:
19 18 0.53
20 16 0.47
ACGTcount: A:0.32, C:0.16, G:0.18, T:0.35
Consensus pattern (19 bp):
ACATTGTATCGATACATGG
Found at i:61926 original size:13 final size:13
Alignment explanation
Indices: 61908--61933 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
61898 CATGGTAAAA
61908 TGTATCGATACAT
1 TGTATCGATACAT
61921 TGTATCGATACAT
1 TGTATCGATACAT
61934 GATGAAATGT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:61929 original size:33 final size:33
Alignment explanation
Indices: 61887--61949 Score: 108
Period size: 33 Copynumber: 1.9 Consensus size: 33
61877 CTATCACTAT
*
61887 TTGTATCGATACATGGTAAAATGTATCGATACA
1 TTGTATCGATACATGATAAAATGTATCGATACA
*
61920 TTGTATCGATACATGATGAAATGTATCGAT
1 TTGTATCGATACATGATAAAATGTATCGAT
61950 GCATAGCTTG
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
33 28 1.00
ACGTcount: A:0.35, C:0.11, G:0.19, T:0.35
Consensus pattern (33 bp):
TTGTATCGATACATGATAAAATGTATCGATACA
Found at i:77673 original size:9 final size:9
Alignment explanation
Indices: 77659--77690 Score: 50
Period size: 8 Copynumber: 3.8 Consensus size: 9
77649 AAAGAGAACA
77659 AAAAAAGAG
1 AAAAAAGAG
77668 AAAAAAGA-
1 AAAAAAGAG
77676 AAAAAA-AG
1 AAAAAAGAG
77684 AAAAAAG
1 AAAAAAG
77691 TATGAAAGCT
Statistics
Matches: 21, Mismatches: 0, Indels: 4
0.84 0.00 0.16
Matches are distributed among these distances:
7 1 0.05
8 12 0.57
9 8 0.38
ACGTcount: A:0.84, C:0.00, G:0.16, T:0.00
Consensus pattern (9 bp):
AAAAAAGAG
Found at i:77680 original size:16 final size:16
Alignment explanation
Indices: 77658--77690 Score: 57
Period size: 16 Copynumber: 2.0 Consensus size: 16
77648 AAAAGAGAAC
77658 AAAAAAAGAGAAAAAAG
1 AAAAAAA-AGAAAAAAG
77675 AAAAAAAAGAAAAAAG
1 AAAAAAAAGAAAAAAG
77691 TATGAAAGCT
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
16 9 0.56
17 7 0.44
ACGTcount: A:0.85, C:0.00, G:0.15, T:0.00
Consensus pattern (16 bp):
AAAAAAAAGAAAAAAG
Found at i:78745 original size:21 final size:19
Alignment explanation
Indices: 78719--78770 Score: 59
Period size: 19 Copynumber: 2.6 Consensus size: 19
78709 TCATAATTTA
78719 TATCGATACAAACAGTAAATG
1 TATCGATACAAA-AGT-AATG
* *
78740 TATCGATACATAAGTATTG
1 TATCGATACAAAAGTAATG
*
78759 TATCAATACAAA
1 TATCGATACAAA
78771 GTTACCCTGC
Statistics
Matches: 27, Mismatches: 4, Indels: 2
0.82 0.12 0.06
Matches are distributed among these distances:
19 13 0.48
20 3 0.11
21 11 0.41
ACGTcount: A:0.46, C:0.13, G:0.12, T:0.29
Consensus pattern (19 bp):
TATCGATACAAAAGTAATG
Found at i:78834 original size:13 final size:13
Alignment explanation
Indices: 78816--78843 Score: 56
Period size: 13 Copynumber: 2.2 Consensus size: 13
78806 CATTATTCAA
78816 TGTATCGATACAT
1 TGTATCGATACAT
78829 TGTATCGATACAT
1 TGTATCGATACAT
78842 TG
1 TG
78844 ATCTTTGTAT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 15 1.00
ACGTcount: A:0.29, C:0.14, G:0.18, T:0.39
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:81959 original size:19 final size:19
Alignment explanation
Indices: 81919--81970 Score: 68
Period size: 19 Copynumber: 2.7 Consensus size: 19
81909 CAGTTTCATC
**
81919 TATCGATACAATTGTCCATG
1 TATCGATACAA-TGAACATG
81939 TATCGATACAATGAACATG
1 TATCGATACAATGAACATG
*
81958 TATCGTTACAATG
1 TATCGATACAATG
81971 TATCGATACA
Statistics
Matches: 29, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
19 18 0.62
20 11 0.38
ACGTcount: A:0.35, C:0.17, G:0.15, T:0.33
Consensus pattern (19 bp):
TATCGATACAATGAACATG
Found at i:82988 original size:33 final size:33
Alignment explanation
Indices: 82950--83013 Score: 85
Period size: 33 Copynumber: 1.9 Consensus size: 33
82940 TGCACCAAAG
*
82950 TGCTCA-TCCATACGCTGTGAGAGTGAAGTGAAT
1 TGCTCACT-CATACGCTGTGACAGTGAAGTGAAT
* *
82983 TGCTCACTCATATGTTGTGACAGTGAAGTGA
1 TGCTCACTCATACGCTGTGACAGTGAAGTGA
83014 TCAACTCTCA
Statistics
Matches: 27, Mismatches: 3, Indels: 2
0.84 0.09 0.06
Matches are distributed among these distances:
33 26 0.96
34 1 0.04
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.30
Consensus pattern (33 bp):
TGCTCACTCATACGCTGTGACAGTGAAGTGAAT
Found at i:84350 original size:13 final size:13
Alignment explanation
Indices: 84332--84357 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
84322 CACACCCAGA
84332 TGTATCGATACAT
1 TGTATCGATACAT
84345 TGTATCGATACAT
1 TGTATCGATACAT
84358 GTTCATCGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:84370 original size:19 final size:20
Alignment explanation
Indices: 84346--84397 Score: 70
Period size: 20 Copynumber: 2.6 Consensus size: 20
84336 TCGATACATT
**
84346 GTATCGATACATGTTC-ATC
1 GTATCGATACATGGACAATC
*
84365 GTATCGATACATGGACAATT
1 GTATCGATACATGGACAATC
84385 GTATCGATACATG
1 GTATCGATACATG
84398 AAACTGGCAG
Statistics
Matches: 29, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
19 14 0.48
20 15 0.52
ACGTcount: A:0.31, C:0.17, G:0.19, T:0.33
Consensus pattern (20 bp):
GTATCGATACATGGACAATC
Found at i:84390 original size:20 final size:19
Alignment explanation
Indices: 84341--84397 Score: 78
Period size: 19 Copynumber: 2.9 Consensus size: 19
84331 ATGTATCGAT
*
84341 ACATTGTATCGATACATGT
1 ACATTGTATCGATACATGG
* *
84360 TCATCGTATCGATACATGG
1 ACATTGTATCGATACATGG
84379 ACAATTGTATCGATACATG
1 AC-ATTGTATCGATACATG
84398 AAACTGGCAG
Statistics
Matches: 32, Mismatches: 5, Indels: 1
0.84 0.13 0.03
Matches are distributed among these distances:
19 17 0.53
20 15 0.47
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.33
Consensus pattern (19 bp):
ACATTGTATCGATACATGG
Found at i:84461 original size:13 final size:13
Alignment explanation
Indices: 84443--84472 Score: 60
Period size: 13 Copynumber: 2.3 Consensus size: 13
84433 GATACATAGG
84443 ACATTGTATCGAT
1 ACATTGTATCGAT
84456 ACATTGTATCGAT
1 ACATTGTATCGAT
84469 ACAT
1 ACAT
84473 GATGAATTGT
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 17 1.00
ACGTcount: A:0.33, C:0.17, G:0.13, T:0.37
Consensus pattern (13 bp):
ACATTGTATCGAT
Found at i:84468 original size:33 final size:33
Alignment explanation
Indices: 84426--84494 Score: 104
Period size: 33 Copynumber: 2.1 Consensus size: 33
84416 CTACCACTGT
84426 TTGTATCGATACAT-AGGACATTGTATCGATACA
1 TTGTATCGATACATGAGGA-ATTGTATCGATACA
* *
84459 TTGTATCGATACATGATGAATTGTATTGATACA
1 TTGTATCGATACATGAGGAATTGTATCGATACA
84492 TTG
1 TTG
84495 CTTGTAACAG
Statistics
Matches: 33, Mismatches: 2, Indels: 2
0.89 0.05 0.05
Matches are distributed among these distances:
33 30 0.91
34 3 0.09
ACGTcount: A:0.32, C:0.12, G:0.19, T:0.38
Consensus pattern (33 bp):
TTGTATCGATACATGAGGAATTGTATCGATACA
Found at i:90417 original size:12 final size:11
Alignment explanation
Indices: 90395--90470 Score: 52
Period size: 12 Copynumber: 6.9 Consensus size: 11
90385 AGAGAAAGAA
*
90395 GAGAGAGGAGG
1 GAGATAGGAGG
90406 GATGATAGGAGG
1 GA-GATAGGAGG
*
90418 AGAGACAGGA--
1 -GAGATAGGAGG
*
90428 GAGATAGTA--
1 GAGATAGGAGG
90437 GAGATAGGAGG
1 GAGATAGGAGG
90448 GATGATAGGAGG
1 GA-GATAGGAGG
*
90460 AGAGACAGGAG
1 -GAGATAGGAG
90471 AGATAATAGA
Statistics
Matches: 53, Mismatches: 6, Indels: 11
0.76 0.09 0.16
Matches are distributed among these distances:
9 15 0.28
11 4 0.08
12 30 0.57
13 4 0.08
ACGTcount: A:0.39, C:0.03, G:0.49, T:0.09
Consensus pattern (11 bp):
GAGATAGGAGG
Found at i:90427 original size:24 final size:24
Alignment explanation
Indices: 90394--90479 Score: 85
Period size: 24 Copynumber: 3.8 Consensus size: 24
90384 AAGAGAAAGA
*
90394 AGAGAGAGGAGGGATGATAGGAGG
1 AGAGACAGGAGGGATGATAGGAGG
*
90418 AGAGACAGGA--GA-GAT---AGT
1 AGAGACAGGAGGGATGATAGGAGG
*
90436 AGAGATAGGAGGGATGATAGGAGG
1 AGAGACAGGAGGGATGATAGGAGG
* *
90460 AGAGACAGGAGAGATAATAG
1 AGAGACAGGAGGGATGATAG
90480 AGAGAGGAGG
Statistics
Matches: 49, Mismatches: 7, Indels: 12
0.72 0.10 0.18
Matches are distributed among these distances:
18 11 0.22
20 2 0.04
21 6 0.12
22 2 0.04
24 28 0.57
ACGTcount: A:0.42, C:0.02, G:0.45, T:0.10
Consensus pattern (24 bp):
AGAGACAGGAGGGATGATAGGAGG
Found at i:90446 original size:42 final size:42
Alignment explanation
Indices: 90385--90503 Score: 193
Period size: 42 Copynumber: 2.8 Consensus size: 42
90375 TAGCCCTCAA
* *
90385 AGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
*
90427 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
* *
90469 AGAGATAATAGAGAGAGGAGGGATGACAGGAGGAG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAG
90504 GAGAGAAGAA
Statistics
Matches: 71, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
42 71 1.00
ACGTcount: A:0.43, C:0.03, G:0.46, T:0.08
Consensus pattern (42 bp):
AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
Found at i:97397 original size:13 final size:13
Alignment explanation
Indices: 97379--97405 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
97369 ACAACATTCC
97379 TTGTATCGATACA
1 TTGTATCGATACA
97392 TTGTATCGATACA
1 TTGTATCGATACA
97405 T
1 T
97406 GGGTTACTAT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.30, C:0.15, G:0.15, T:0.41
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:97783 original size:16 final size:16
Alignment explanation
Indices: 97764--97800 Score: 67
Period size: 16 Copynumber: 2.4 Consensus size: 16
97754 ACTCGTTTAT
97764 TTCAAAATCCAAGCCC
1 TTCAAAATCCAAGCCC
97780 TTCAAAATCCAAGCCC
1 TTCAAAATCCAAGCCC
97796 -TCAAA
1 TTCAAA
97801 GTTGTGTCCA
Statistics
Matches: 21, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
15 5 0.24
16 16 0.76
ACGTcount: A:0.41, C:0.35, G:0.05, T:0.19
Consensus pattern (16 bp):
TTCAAAATCCAAGCCC
Found at i:99344 original size:13 final size:13
Alignment explanation
Indices: 99326--99351 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
99316 CAATTTTTTG
99326 TGTATCGATACAT
1 TGTATCGATACAT
99339 TGTATCGATACAT
1 TGTATCGATACAT
99352 ACTTGCTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:101894 original size:13 final size:13
Alignment explanation
Indices: 101876--101914 Score: 69
Period size: 13 Copynumber: 3.0 Consensus size: 13
101866 ATAATCACCC
*
101876 TGTATCGATACAG
1 TGTATCGATACAA
101889 TGTATCGATACAA
1 TGTATCGATACAA
101902 TGTATCGATACAA
1 TGTATCGATACAA
101915 AGAAAAAGTA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
13 25 1.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:104003 original size:15 final size:15
Alignment explanation
Indices: 103983--104013 Score: 53
Period size: 15 Copynumber: 2.1 Consensus size: 15
103973 ATTTCGTTTG
*
103983 GAGCTTCTTCATTTT
1 GAGCTTCCTCATTTT
103998 GAGCTTCCTCATTTT
1 GAGCTTCCTCATTTT
104013 G
1 G
104014 GACATTTTTA
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.13, C:0.23, G:0.16, T:0.48
Consensus pattern (15 bp):
GAGCTTCCTCATTTT
Found at i:105846 original size:21 final size:21
Alignment explanation
Indices: 105817--105861 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 21
105807 AAGTTTTCAT
*
105817 TTTTCTTAGCTAAC-TCATTA
1 TTTTCTTAGCCAACTTCATTA
*
105837 TTTTCATTAGCCAACTTCTTTA
1 TTTTC-TTAGCCAACTTCATTA
105859 TTT
1 TTT
105862 CAACTTGCAA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
20 5 0.24
21 8 0.38
22 8 0.38
ACGTcount: A:0.22, C:0.20, G:0.04, T:0.53
Consensus pattern (21 bp):
TTTTCTTAGCCAACTTCATTA
Found at i:108097 original size:13 final size:13
Alignment explanation
Indices: 108079--108104 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
108069 CAATTTTTTG
108079 TGTATCGATACAT
1 TGTATCGATACAT
108092 TGTATCGATACAT
1 TGTATCGATACAT
108105 ACTTGCTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:109977 original size:33 final size:33
Alignment explanation
Indices: 109935--110003 Score: 95
Period size: 33 Copynumber: 2.1 Consensus size: 33
109925 CTGCCACTGT
*
109935 TTGTATCGATACAT-AGGATATTATATCGATATA
1 TTGTATCGATACATGAGGA-ATTATATCGATACA
* *
109968 TTGTATCGATACATGATGAATTGTATCGATACA
1 TTGTATCGATACATGAGGAATTATATCGATACA
110001 TTG
1 TTG
110004 CTTGTAACGG
Statistics
Matches: 32, Mismatches: 3, Indels: 2
0.86 0.08 0.05
Matches are distributed among these distances:
33 29 0.91
34 3 0.09
ACGTcount: A:0.33, C:0.10, G:0.17, T:0.39
Consensus pattern (33 bp):
TTGTATCGATACATGAGGAATTATATCGATACA
Found at i:114383 original size:13 final size:13
Alignment explanation
Indices: 114365--114389 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
114355 TACCATTGTT
114365 TGTATCGATACAA
1 TGTATCGATACAA
114378 TGTATCGATACA
1 TGTATCGATACA
114390 CGATGAATTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:120396 original size:21 final size:20
Alignment explanation
Indices: 120358--120396 Score: 51
Period size: 20 Copynumber: 1.9 Consensus size: 20
120348 TGAGATGTAG
* *
120358 TTATTTTTGATGATTTTGTT
1 TTATTATTGATGAATTTGTT
120378 TTATTATTGAATGAATTTG
1 TTATTATTG-ATGAATTTG
120397 ATGTTTAACT
Statistics
Matches: 16, Mismatches: 2, Indels: 1
0.84 0.11 0.05
Matches are distributed among these distances:
20 8 0.50
21 8 0.50
ACGTcount: A:0.23, C:0.00, G:0.15, T:0.62
Consensus pattern (20 bp):
TTATTATTGATGAATTTGTT
Found at i:123146 original size:13 final size:13
Alignment explanation
Indices: 123128--123152 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
123118 CATTATGCTT
123128 TGTATCGATACAA
1 TGTATCGATACAA
123141 TGTATCGATACA
1 TGTATCGATACA
123153 TGTTCAATGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:123189 original size:20 final size:19
Alignment explanation
Indices: 123137--123193 Score: 78
Period size: 19 Copynumber: 2.9 Consensus size: 19
123127 TTGTATCGAT
*
123137 ACAATGTATCGATACATGT
1 ACAATGTATCGATACATGG
* *
123156 TCAATGTATTGATACATGG
1 ACAATGTATCGATACATGG
123175 ACAATTGTATCGATACATG
1 ACAA-TGTATCGATACATG
123194 AAACTGGCAA
Statistics
Matches: 32, Mismatches: 5, Indels: 1
0.84 0.13 0.03
Matches are distributed among these distances:
19 19 0.59
20 13 0.41
ACGTcount: A:0.35, C:0.14, G:0.18, T:0.33
Consensus pattern (19 bp):
ACAATGTATCGATACATGG
Found at i:123241 original size:13 final size:13
Alignment explanation
Indices: 123223--123247 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
123213 TACCACTATT
123223 TGTATCGATACAA
1 TGTATCGATACAA
123236 TGTATCGATACA
1 TGTATCGATACA
123248 TAATGAATTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:124685 original size:20 final size:20
Alignment explanation
Indices: 124648--124701 Score: 72
Period size: 20 Copynumber: 2.6 Consensus size: 20
124638 TTTTACAATT
* *
124648 TGTATCAATACAATAAGTTAA
1 TGTATCGATAC-ATAAGTGAA
*
124669 TGTATTGATACATAAGTGAA
1 TGTATCGATACATAAGTGAA
124689 TGTATCGATACAT
1 TGTATCGATACAT
124702 GCTTGCAATG
Statistics
Matches: 29, Mismatches: 4, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
20 20 0.69
21 9 0.31
ACGTcount: A:0.41, C:0.09, G:0.15, T:0.35
Consensus pattern (20 bp):
TGTATCGATACATAAGTGAA
Found at i:131117 original size:31 final size:31
Alignment explanation
Indices: 131081--131148 Score: 118
Period size: 31 Copynumber: 2.2 Consensus size: 31
131071 GTATCCATAT
*
131081 TTATCAAGCCACATAATTTGCAGCTAATAAA
1 TTATCAAGACACATAATTTGCAGCTAATAAA
*
131112 TTATCAAGATACATAATTTGCAGCTAATAAA
1 TTATCAAGACACATAATTTGCAGCTAATAAA
131143 TTATCA
1 TTATCA
131149 TAAATTGAGA
Statistics
Matches: 35, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
31 35 1.00
ACGTcount: A:0.43, C:0.16, G:0.09, T:0.32
Consensus pattern (31 bp):
TTATCAAGACACATAATTTGCAGCTAATAAA
Found at i:136237 original size:75 final size:75
Alignment explanation
Indices: 136083--136334 Score: 208
Period size: 76 Copynumber: 3.3 Consensus size: 75
136073 AAGGCTTTTG
* * * * * * *
136083 TATGAACCTAGACTCAGTTTTGAGCTACTATTACCTAAATAATCTTCATGGACATG-TTTCAAAG
1 TATGACCCTAGACTCAGTTTTAAGC-ACTATTACCTAAATAACCTTAATGAAAATGTTTTGAAA-
*
136147 CAAAAG-TTCCTA
64 CAAAAGTTTTC-A
* *
136159 TATGACCCTAGACTCTA-TTTTAAACACTATTACCTAAATAACCTTAATGAAAATGTTTTGATAC
1 TATGACCCTAGACTC-AGTTTTAAGCACTATTACCTAAATAACCTTAATGAAAATGTTTTGAAAC
136223 AAAAGTTTTCA
65 AAAAGTTTTCA
* * * * * * * *
136234 TATGACCTTAATACTCAGTTTGAATGTAATAATACCTAAAT-ACTCTTAA-CAGATATGTTTTGA
1 TATGACCCT-AGACTCAGTTTTAA-GCACTATTACCTAAATAAC-CTTAATGA-AAATGTTTTGA
* *
136297 CATAAAAGTTTTCA
62 AACAAAAGTTTTCA
*
136311 TATGACCCTAGACTTAGTTTTAAG
1 TATGACCCTAGACTCAGTTTTAAG
136335 GTAGTATTAC
Statistics
Matches: 143, Mismatches: 25, Indels: 17
0.77 0.14 0.09
Matches are distributed among these distances:
75 43 0.30
76 52 0.36
77 48 0.34
ACGTcount: A:0.36, C:0.17, G:0.11, T:0.36
Consensus pattern (75 bp):
TATGACCCTAGACTCAGTTTTAAGCACTATTACCTAAATAACCTTAATGAAAATGTTTTGAAACA
AAAGTTTTCA
Found at i:136564 original size:28 final size:29
Alignment explanation
Indices: 136453--136567 Score: 66
Period size: 28 Copynumber: 4.1 Consensus size: 29
136443 AATGGTCATA
* *
136453 AAATGCATAGAAAATGCTAAAGTGACCTT
1 AAATGCATAGAAAATGCTAAAATGACCCT
* * * *
136482 AAAT-TATATAAAATAACCT-AAATG-GCC-
1 AAATGCATAGAAAAT--GCTAAAATGACCCT
* *
136509 AAATGCATA-AAATTG-TAAAATAATCCCT
1 AAATGCATAGAAAATGCTAAAATGA-CCCT
136537 AAAT-CATA-AAAATGACTAAAATGACCCT
1 AAATGCATAGAAAATG-CTAAAATGACCCT
136565 AAA
1 AAA
136568 ATGTATAAAA
Statistics
Matches: 64, Mismatches: 13, Indels: 19
0.67 0.14 0.20
Matches are distributed among these distances:
24 1 0.02
25 4 0.06
27 19 0.30
28 23 0.36
29 15 0.23
30 2 0.03
ACGTcount: A:0.51, C:0.15, G:0.10, T:0.24
Consensus pattern (29 bp):
AAATGCATAGAAAATGCTAAAATGACCCT
Found at i:136632 original size:53 final size:52
Alignment explanation
Indices: 136530--136634 Score: 131
Period size: 53 Copynumber: 2.0 Consensus size: 52
136520 ATTGTAAAAT
*
136530 AATCCCTAAATCATAAAAATGACTAAAATGACCCTAAAATGTATAAAATTAC
1 AATCCCTAAATCATAAAAATGACTAAAATGACCCTAAAATGCATAAAATTAC
* * * * *
136582 AATCCCTAAATCATGTAAAAA-GATTGAAATGGCCTTAAAATGCATGAAATTAC
1 AATCCCTAAATCA--TAAAAATGACTAAAATGACCCTAAAATGCATAAAATTAC
136635 TAAAGTGACC
Statistics
Matches: 45, Mismatches: 6, Indels: 3
0.83 0.11 0.06
Matches are distributed among these distances:
52 13 0.29
53 26 0.58
54 6 0.13
ACGTcount: A:0.49, C:0.16, G:0.10, T:0.26
Consensus pattern (52 bp):
AATCCCTAAATCATAAAAATGACTAAAATGACCCTAAAATGCATAAAATTAC
Found at i:138207 original size:21 final size:21
Alignment explanation
Indices: 138181--138224 Score: 88
Period size: 21 Copynumber: 2.1 Consensus size: 21
138171 CCCATGCATG
138181 ATTAATGAAATGTATCAATAC
1 ATTAATGAAATGTATCAATAC
138202 ATTAATGAAATGTATCAATAC
1 ATTAATGAAATGTATCAATAC
138223 AT
1 AT
138225 CTTCATGAAT
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 23 1.00
ACGTcount: A:0.48, C:0.09, G:0.09, T:0.34
Consensus pattern (21 bp):
ATTAATGAAATGTATCAATAC
Found at i:145092 original size:20 final size:20
Alignment explanation
Indices: 145067--145141 Score: 125
Period size: 20 Copynumber: 3.8 Consensus size: 20
145057 GTTTGAAGCA
*
145067 ATGTATCGATACAAT-TCATC
1 ATGTATCGATACAATGT-ACC
145087 ATGTATCGATACAATGTACC
1 ATGTATCGATACAATGTACC
145107 ATGTATCGATACAATGTACC
1 ATGTATCGATACAATGTACC
145127 ATGTATCGATACAAT
1 ATGTATCGATACAAT
145142 ATATCGATAC
Statistics
Matches: 53, Mismatches: 1, Indels: 2
0.95 0.02 0.04
Matches are distributed among these distances:
20 52 0.98
21 1 0.02
ACGTcount: A:0.36, C:0.19, G:0.13, T:0.32
Consensus pattern (20 bp):
ATGTATCGATACAATGTACC
Found at i:149063 original size:20 final size:20
Alignment explanation
Indices: 149038--149094 Score: 87
Period size: 20 Copynumber: 2.9 Consensus size: 20
149028 TTTTACCCAG
149038 ATGTATCGATACATTTTTCA
1 ATGTATCGATACATTTTTCA
* * *
149058 ATGTATCGATACATGTATGA
1 ATGTATCGATACATTTTTCA
149078 ATGTATCGATACATTTT
1 ATGTATCGATACATTTT
149095 GTCTTTTTTA
Statistics
Matches: 32, Mismatches: 5, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
20 32 1.00
ACGTcount: A:0.32, C:0.12, G:0.14, T:0.42
Consensus pattern (20 bp):
ATGTATCGATACATTTTTCA
Found at i:149119 original size:32 final size:32
Alignment explanation
Indices: 149078--149197 Score: 91
Period size: 31 Copynumber: 3.5 Consensus size: 32
149068 ACATGTATGA
149078 ATGTATCGATACATTTTGTCTTTTTTACCTAG
1 ATGTATCGATACATTTTGTCTTTTTTACCTAG
* * *
149110 ATGTATCGATATATTTT-TCAATGTATTGATACATGTATG
1 ATGTATCGATACATTTTGTC--T-T-TT-TTAC--CTA-G
* * *
149149 AATGTATCGATTCATTTTGTC-TTTTTCCCCAG
1 -ATGTATCGATACATTTTGTCTTTTTTACCTAG
149181 ATGTATCGATACATTTT
1 ATGTATCGATACATTTT
149198 TCAATGTATC
Statistics
Matches: 68, Mismatches: 10, Indels: 21
0.69 0.10 0.21
Matches are distributed among these distances:
31 18 0.26
32 17 0.25
33 2 0.03
34 1 0.01
35 4 0.06
36 5 0.07
37 1 0.01
38 2 0.03
39 1 0.01
40 15 0.22
41 2 0.03
ACGTcount: A:0.25, C:0.14, G:0.13, T:0.47
Consensus pattern (32 bp):
ATGTATCGATACATTTTGTCTTTTTTACCTAG
Found at i:149135 original size:20 final size:20
Alignment explanation
Indices: 149110--149159 Score: 55
Period size: 20 Copynumber: 2.5 Consensus size: 20
149100 TTTTACCTAG
* * *
149110 ATGTATCGATATATTTTTCA
1 ATGTATCGATACATGTATCA
* *
149130 ATGTATTGATACATGTATGA
1 ATGTATCGATACATGTATCA
149150 ATGTATCGAT
1 ATGTATCGAT
149160 TCATTTTGTC
Statistics
Matches: 24, Mismatches: 6, Indels: 0
0.80 0.20 0.00
Matches are distributed among these distances:
20 24 1.00
ACGTcount: A:0.32, C:0.08, G:0.16, T:0.44
Consensus pattern (20 bp):
ATGTATCGATACATGTATCA
Found at i:149144 original size:72 final size:71
Alignment explanation
Indices: 149027--149234 Score: 362
Period size: 72 Copynumber: 2.9 Consensus size: 71
149017 AAAAGTCACA
149027 TTTTTACCCAGATGTATCGATACATTTTTCAATGTATCGATACATGTATGAATGTATCGATACAT
1 TTTTTACCCAGATGTATCGATACATTTTTCAATGTATCGATACATGTATGAATGTATCGATACAT
149092 TTTGTC
66 TTTGTC
* * * *
149098 TTTTTTACCTAGATGTATCGATATATTTTTCAATGTATTGATACATGTATGAATGTATCGATTCA
1 -TTTTTACCCAGATGTATCGATACATTTTTCAATGTATCGATACATGTATGAATGTATCGATACA
149163 TTTTGTC
65 TTTTGTC
*
149170 TTTTTCCCCAGATGTATCGATACATTTTTCAATGTATCGATACATGTATGAATGTATCGATACAT
1 TTTTTACCCAGATGTATCGATACATTTTTCAATGTATCGATACATGTATGAATGTATCGATACAT
149235 GTATGAATGT
Statistics
Matches: 127, Mismatches: 9, Indels: 1
0.93 0.07 0.01
Matches are distributed among these distances:
71 60 0.47
72 67 0.53
ACGTcount: A:0.28, C:0.14, G:0.14, T:0.44
Consensus pattern (71 bp):
TTTTTACCCAGATGTATCGATACATTTTTCAATGTATCGATACATGTATGAATGTATCGATACAT
TTTGTC
Found at i:149206 original size:20 final size:20
Alignment explanation
Indices: 149181--149267 Score: 129
Period size: 20 Copynumber: 4.3 Consensus size: 20
149171 TTTTCCCCAG
* * *
149181 ATGTATCGATACATTTTTCA
1 ATGTATCGATACATGTATGA
149201 ATGTATCGATACATGTATGA
1 ATGTATCGATACATGTATGA
149221 ATGTATCGATACATGTATGA
1 ATGTATCGATACATGTATGA
* *
149241 ATGTATCGATTCATATATGA
1 ATGTATCGATACATGTATGA
149261 ATGTATC
1 ATGTATC
149268 AATATATTCT
Statistics
Matches: 62, Mismatches: 5, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
20 62 1.00
ACGTcount: A:0.33, C:0.11, G:0.16, T:0.39
Consensus pattern (20 bp):
ATGTATCGATACATGTATGA
Found at i:149300 original size:51 final size:50
Alignment explanation
Indices: 149241--149373 Score: 180
Period size: 51 Copynumber: 2.6 Consensus size: 50
149231 ACATGTATGA
* *
149241 ATGTATCGATTCATATATGAATGTATCAATATATTCTGTCTTTTTA-CCTAG
1 ATGTATCGATACAT-TATGAATGTATCAATACATTCTGTCTTTTTATCC-AG
*
149292 ATGTATCGATACATGTATGAATGTATCGATACATTCTGTCTTTTTATCCAG
1 ATGTATCGATACAT-TATGAATGTATCAATACATTCTGTCTTTTTATCCAG
149343 ATGTATCGATACATTGAAT-AATGTATCAATA
1 ATGTATCGATACATT--ATGAATGTATCAATA
149374 GATCTAGTTA
Statistics
Matches: 74, Mismatches: 5, Indels: 6
0.87 0.06 0.07
Matches are distributed among these distances:
50 1 0.01
51 69 0.93
52 4 0.05
ACGTcount: A:0.32, C:0.14, G:0.14, T:0.41
Consensus pattern (50 bp):
ATGTATCGATACATTATGAATGTATCAATACATTCTGTCTTTTTATCCAG
Found at i:151778 original size:34 final size:34
Alignment explanation
Indices: 151735--152191 Score: 361
Period size: 34 Copynumber: 13.8 Consensus size: 34
151725 CTCAGTGGCA
* *
151735 TCAAAGTCCACGACTCCGTGACACCTTTTTCTTT
1 TCAAAGTCCACAACTCCGTGGCACCTTTTTCTTT
*
151769 TCAAAGTCCACGACTCCGTGGCACC---TTCTTT
1 TCAAAGTCCACAACTCCGTGGCACCTTTTTCTTT
* * *
151800 TCAAAGCCCACAACTCTGTGGCATCTTTTTCCTTT
1 TCAAAGTCCACAACTCCGTGGCACCTTTTT-CTTT
* * *
151835 TTAAAGCCCACAACTCCGTGGCACTCTTTTTC-CT
1 TCAAAGTCCACAACTCCGTGGCAC-CTTTTTCTTT
*
151869 TCTAAGTCCACAACTCCGTGGCACC---TTCTTT
1 TCAAAGTCCACAACTCCGTGGCACCTTTTTCTTT
*
151900 TCAAAGCCCACAACTCCGTGGCACTCTTTTTCCCTTT
1 TCAAAGTCCACAACTCCGTGGCAC-CTTTTT--CTTT
* *
151937 T-AAAGTCCACAACTCTGTGGCACCTTGTTCCTTT
1 TCAAAGTCCACAACTCCGTGGCACCTT-TTTCTTT
* *
151971 T--AAGTCCACGACTCCATGGCACC---TTCTTT
1 TCAAAGTCCACAACTCCGTGGCACCTTTTTCTTT
* *
152000 TCAAAGCCCACAACTTCGTGGCACTCTTTTTCCCTTT
1 TCAAAGTCCACAACTCCGTGGCAC-CTTTTT--CTTT
* * * *
152037 T-AAAGCCCACAACTTCATGGCACTCTTTTTC-CT
1 TCAAAGTCCACAACTCCGTGGCAC-CTTTTTCTTT
* * *
152070 TCTAAGTCCACAACTCTGTGGCACC-----CGTT
1 TCAAAGTCCACAACTCCGTGGCACCTTTTTCTTT
* *
152099 T--AAGCCCACAACTCCGTGGCACTCTTTTTC-CT
1 TCAAAGTCCACAACTCCGTGGCAC-CTTTTTCTTT
* *
152131 TCTAAGTCCACAACTCCGTGGCACCTTGTTCCTTT
1 TCAAAGTCCACAACTCCGTGGCACCTT-TTTCTTT
* *
152166 T--AAGTCCATAACTTCGTGGCACCTTT
1 TCAAAGTCCACAACTCCGTGGCACCTTT
152192 CACCCTTCTC
Statistics
Matches: 348, Mismatches: 42, Indels: 68
0.76 0.09 0.15
Matches are distributed among these distances:
27 19 0.05
28 2 0.01
29 8 0.02
30 3 0.01
31 67 0.19
32 5 0.01
33 49 0.14
34 94 0.27
35 35 0.10
36 56 0.16
37 10 0.03
ACGTcount: A:0.20, C:0.34, G:0.13, T:0.33
Consensus pattern (34 bp):
TCAAAGTCCACAACTCCGTGGCACCTTTTTCTTT
Found at i:151921 original size:100 final size:100
Alignment explanation
Indices: 151737--152190 Score: 616
Period size: 100 Copynumber: 4.6 Consensus size: 100
151727 CAGTGGCATC
* * * * *
151737 AAAGTCCACGACTCCGTGACACCTTTTTCTTTTCAAAGTCCACGACTCCGTGGCACCTTCTTTTC
1 AAAGTCCACAACTCCGTGGCACCTTTTTC-CTTCTAAGTCCACAACTCCGTGGCACCTTCTTTTC
* *
151802 AAAGCCCACAACTCTGTGGCA-TCTTTTTCCTTTTT
65 AAAGCCCACAACTCCGTGGCACTCTTTTTCCCTTTT
*
151837 AAAGCCCACAACTCCGTGGCACTCTTTTTCCTTCTAAGTCCACAACTCCGTGGCACCTTCTTTTC
1 AAAGTCCACAACTCCGTGGCAC-CTTTTTCCTTCTAAGTCCACAACTCCGTGGCACCTTCTTTTC
151902 AAAGCCCACAACTCCGTGGCACTCTTTTTCCCTTTT
65 AAAGCCCACAACTCCGTGGCACTCTTTTTCCCTTTT
* * * * *
151938 AAAGTCCACAACTCTGTGGCACCTTGTTCCTTTTAAGTCCACGACTCCATGGCACCTTCTTTTCA
1 AAAGTCCACAACTCCGTGGCACCTTTTTCCTTCTAAGTCCACAACTCCGTGGCACCTTCTTTTCA
*
152003 AAGCCCACAACTTCGTGGCACTCTTTTTCCCTTTT
66 AAGCCCACAACTCCGTGGCACTCTTTTTCCCTTTT
* * * * *
152038 AAAGCCCACAACTTCATGGCACTCTTTTTCCTTCTAAGTCCACAACTCTGTGGCACC--CGTTT-
1 AAAGTCCACAACTCCGTGGCAC-CTTTTTCCTTCTAAGTCCACAACTCCGTGGCACCTTCTTTTC
*
152100 -AAGCCCACAACTCCGTGGCACTCTTTTT-CCTTCT
65 AAAGCCCACAACTCCGTGGCACTCTTTTTCCCTTTT
* * * *
152134 -AAGTCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCATAACTTCGTGGCACCTT
1 AAAGTCCACAACTCCGTGGCACCTTTTTCCTTCTAAGTCCACAACTCCGTGGCACCTT
152191 TCACCCTTCT
Statistics
Matches: 314, Mismatches: 35, Indels: 14
0.87 0.10 0.04
Matches are distributed among these distances:
94 29 0.09
95 18 0.06
96 5 0.02
97 27 0.09
99 4 0.01
100 162 0.52
101 69 0.22
ACGTcount: A:0.20, C:0.34, G:0.13, T:0.33
Consensus pattern (100 bp):
AAAGTCCACAACTCCGTGGCACCTTTTTCCTTCTAAGTCCACAACTCCGTGGCACCTTCTTTTCA
AAGCCCACAACTCCGTGGCACTCTTTTTCCCTTTT
Found at i:152082 original size:201 final size:195
Alignment explanation
Indices: 151737--152173 Score: 673
Period size: 201 Copynumber: 2.2 Consensus size: 195
151727 CAGTGGCATC
* * * *
151737 AAAGTCCACGACTCCGTGACACCTT-TTTCTTTTCAAAGTCCACGACTCCGTGGCACCTTCTTTT
1 AAAGTCCACAACTCCGTGGCACCTTGTTCCTTTT--AAGTCCACGACTCCATGGCACCTTCTTTT
* *
151801 CAAAGCCCACAACTCTGTGGCATCTTTTTCCTTTTTAAAGCCCACAACTCCGTGGCACTCTTTTT
64 CAAAGCCCACAACTCTGTGGCATCTTTTTCCCTTTTAAAGCCCACAACTCCATGGCACTCTTTTT
*
151866 CCTTCTAAGTCCACAACTCCGTGGCACCTTCTTTTCAAAGCCCACAACTCCGTGGCACTCTTTTT
129 CCTTCTAAGTCCACAACTCCGTGGCACC--CGTTT--AAGCCCACAACTCCGTGGCACTCTTTTT
*
151931 CCCTTTT
190 -CCTTCT
*
151938 AAAGTCCACAACTCTGTGGCACCTTGTTCCTTTTAAGTCCACGACTCCATGGCACCTTCTTTTCA
1 AAAGTCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCACGACTCCATGGCACCTTCTTTTCA
*
152003 AAGCCCACAACT-TCGTGGCACTCTTTTTCCCTTTTAAAGCCCACAACTTCATGGCACTCTTTTT
66 AAGCCCACAACTCT-GTGGCA-TCTTTTTCCCTTTTAAAGCCCACAACTCCATGGCACTCTTTTT
*
152067 CCTTCTAAGTCCACAACTCTGTGGCACCCGTTTAAGCCCACAACTCCGTGGCACTCTTTTTCCTT
129 CCTTCTAAGTCCACAACTCCGTGGCACCCGTTTAAGCCCACAACTCCGTGGCACTCTTTTTCCTT
152132 CT
194 CT
152134 -AAGTCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCA
1 AAAGTCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCA
152174 TAACTTCGTG
Statistics
Matches: 221, Mismatches: 12, Indels: 12
0.90 0.05 0.05
Matches are distributed among these distances:
195 39 0.18
196 5 0.02
197 28 0.13
199 5 0.02
200 48 0.22
201 89 0.40
202 7 0.03
ACGTcount: A:0.20, C:0.34, G:0.13, T:0.33
Consensus pattern (195 bp):
AAAGTCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCACGACTCCATGGCACCTTCTTTTCA
AAGCCCACAACTCTGTGGCATCTTTTTCCCTTTTAAAGCCCACAACTCCATGGCACTCTTTTTCC
TTCTAAGTCCACAACTCCGTGGCACCCGTTTAAGCCCACAACTCCGTGGCACTCTTTTTCCTTCT
Found at i:152119 original size:61 final size:61
Alignment explanation
Indices: 152039--152155 Score: 207
Period size: 61 Copynumber: 1.9 Consensus size: 61
152029 TTCCCTTTTA
* *
152039 AAGCCCACAACTTCATGGCACTCTTTTTCCTTCTAAGTCCACAACTCTGTGGCACCCGTTT
1 AAGCCCACAACTCCATGGCACTCTTTTTCCTTCTAAGTCCACAACTCCGTGGCACCCGTTT
*
152100 AAGCCCACAACTCCGTGGCACTCTTTTTCCTTCTAAGTCCACAACTCCGTGGCACC
1 AAGCCCACAACTCCATGGCACTCTTTTTCCTTCTAAGTCCACAACTCCGTGGCACC
152156 TTGTTCCTTT
Statistics
Matches: 53, Mismatches: 3, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
61 53 1.00
ACGTcount: A:0.21, C:0.37, G:0.14, T:0.28
Consensus pattern (61 bp):
AAGCCCACAACTCCATGGCACTCTTTTTCCTTCTAAGTCCACAACTCCGTGGCACCCGTTT
Found at i:152234 original size:32 final size:32
Alignment explanation
Indices: 152195--152492 Score: 503
Period size: 32 Copynumber: 9.2 Consensus size: 32
152185 CACCTTTCAC
152195 CCTTCTC-AAAGCCCACACAAGTCGGTGGCAA
1 CCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
152226 CCCTTCTC-AAAGCCCACACAAGTCGGTGGCAA
1 -CCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
152258 CCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
1 CCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
152290 CCTTCTTCTAAAGCCCACACAAGTCGGTGGCAA
1 CCTTC-TCTAAAGCCCACACAAGTCGGTGGCAA
152323 CCCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
1 -CCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
152356 CCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
1 CCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
152388 CCTTCTTCTAAAGCCCACACAAGTCGGTGGCAA
1 CCTTC-TCTAAAGCCCACACAAGTCGGTGGCAA
*
152421 CCTTCTTCTAAAGCCTACACAAGTCGGTGGCAA
1 CCTTC-TCTAAAGCCCACACAAGTCGGTGGCAA
152454 CCCTTCTC-AAAGCCCACACAAGTCGGTGGCAA
1 -CCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
152486 CCCTTCT
1 -CCTTCT
152493 AAGCCTAATA
Statistics
Matches: 259, Mismatches: 2, Indels: 10
0.96 0.01 0.04
Matches are distributed among these distances:
31 7 0.03
32 127 0.49
33 115 0.44
34 10 0.04
ACGTcount: A:0.27, C:0.35, G:0.18, T:0.19
Consensus pattern (32 bp):
CCTTCTCTAAAGCCCACACAAGTCGGTGGCAA
Found at i:152358 original size:98 final size:98
Alignment explanation
Indices: 152196--152492 Score: 528
Period size: 98 Copynumber: 3.0 Consensus size: 98
152186 ACCTTTCACC
152196 CTTCTCAAAGCCCACACAAGTCGGTGGCAACCCTTCTC-AAAGCCCACACAAGTCGGTGGCAACC
1 CTTCT-AAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACC
152260 TTCTCTAAAGCCCACACAAGTCGGTGGCAACCTT
65 TTCTCTAAAGCCCACACAAGTCGGTGGCAACCTT
152294 CTTCTAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACCT
1 CTTCTAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACCT
152359 TCTCTAAAGCCCACACAAGTCGGTGGCAACCTT
66 TCTCTAAAGCCCACACAAGTCGGTGGCAACCTT
*
152392 CTTCTAAAGCCCACACAAGTCGGTGGCAA-CCTTCTTCTAAAGCCTACACAAGTCGGTGGCAACC
1 CTTCTAAAGCCCACACAAGTCGGTGGCAACCCTTC-TCTAAAGCCCACACAAGTCGGTGGCAA-C
152456 CTTCTC-AAAGCCCACACAAGTCGGTGGCAACCCTT
64 CTTCTCTAAAGCCCACACAAGTCGGTGGCAA-CCTT
152491 CT
1 CT
152493 AAGCCTAATA
Statistics
Matches: 194, Mismatches: 1, Indels: 7
0.96 0.00 0.03
Matches are distributed among these distances:
97 37 0.19
98 144 0.74
99 13 0.07
ACGTcount: A:0.27, C:0.35, G:0.18, T:0.20
Consensus pattern (98 bp):
CTTCTAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACCT
TCTCTAAAGCCCACACAAGTCGGTGGCAACCTT
Found at i:152564 original size:49 final size:48
Alignment explanation
Indices: 152507--153016 Score: 502
Period size: 43 Copynumber: 10.8 Consensus size: 48
152497 CTAATATCGG
* *
152507 TGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
1 TGGCCTTGAATCAGCACATTGGCACC-TTATCTTTAAGTCCAATGTCGC
152556 TGGCCTTGAATCAGCACATTGG---C--ATCTTTAAGTCCAATGTCGC
1 TGGCCTTGAATCAGCACATTGGCACCTTATCTTTAAGTCCAATGTCGC
*
152599 TGGCCTTGAATCAGCACATTGGCACCTTCATCTTTAAGTCCAATGTAGC
1 TGGCCTTGAATCAGCACATTGGCACCTT-ATCTTTAAGTCCAATGTCGC
* *
152648 TGGCCTTGAATCGGCACATTGGCA-C----CTTTAAGTCCAATATCGC
1 TGGCCTTGAATCAGCACATTGGCACCTTATCTTTAAGTCCAATGTCGC
* * * * *
152691 TAGCCTTGAATCAGCATATTGGCACCATCATCTTTAAGTCCAATGTAGT
1 TGGCCTTGAATCAGCACATTGGCACC-TTATCTTTAAGTCCAATGTCGC
* * *
152740 TGGCCTTGAATCAGCACATTGGCACC---TC--CAAGTCCAATATCGT
1 TGGCCTTGAATCAGCACATTGGCACCTTATCTTTAAGTCCAATGTCGC
* * *
152783 TGGCCTTGAATCAGCATATTGGCACCCTCATCTTTTAAGCCCAATGTCGC
1 TGGCCTTGAATCAGCACATTGGCA-CCTTATC-TTTAAGTCCAATGTCGC
* *
152833 TGGCCTTGAATCAGCACATTGGCA-C----CTTTAAGTCTAATATCGC
1 TGGCCTTGAATCAGCACATTGGCACCTTATCTTTAAGTCCAATGTCGC
* ** * * *
152876 TAGCCTTGAATCAGCATGTTGGCGCCTTTGTCATCTTTAAGTCCAATATCGT
1 TGGCCTTGAATCAGCACATTGGCACC--T-T-ATCTTTAAGTCCAATGTCGC
* ** *
152928 TGGCCTTGAATCAGCATATTGGTGTCTTTGTCATCTTTAAGTCCAATGTCGC
1 TGGCCTTGAATCAGCACATTGG-CAC-CT-T-ATCTTTAAGTCCAATGTCGC
152980 TGGCCTTGAATCAGCACATTGGCACCTTCATCTTTAA
1 TGGCCTTGAATCAGCACATTGGCACCTT-ATCTTTAA
153017 CATGCCTAAG
Statistics
Matches: 388, Mismatches: 43, Indels: 60
0.79 0.09 0.12
Matches are distributed among these distances:
43 147 0.38
44 5 0.01
45 2 0.01
46 2 0.01
47 2 0.01
48 2 0.01
49 112 0.29
50 35 0.09
51 1 0.00
52 79 0.20
53 1 0.00
ACGTcount: A:0.24, C:0.25, G:0.19, T:0.32
Consensus pattern (48 bp):
TGGCCTTGAATCAGCACATTGGCACCTTATCTTTAAGTCCAATGTCGC
Found at i:152665 original size:92 final size:92
Alignment explanation
Indices: 152499--153016 Score: 685
Period size: 92 Copynumber: 5.5 Consensus size: 92
152489 TTCTAAGCCT
* *
152499 AATATCGGTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCTGGCCTTG
1 AATATCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATGTAGCTGGCCTTG
*
152564 AATCAGCACATTGGCATCTTTAAGTCC
66 AATCAGCACATTGGCACCTTTAAGTCC
* *
152591 AATGTCGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTTTAAGTCCAATGTAGCTGGCCTTG
1 AATATCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATGTAGCTGGCCTTG
*
152656 AATCGGCACATTGGCACCTTTAAGTCC
66 AATCAGCACATTGGCACCTTTAAGTCC
* * *
152683 AATATCGCTAGCCTTGAATCAGCATATTGGCACCATCATCTTTAAGTCCAATGTAGTTGGCCTTG
1 AATATCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATGTAGCTGGCCTTG
**
152748 AATCAGCACATTGGCACCTCCAAGTCC
66 AATCAGCACATTGGCACCTTTAAGTCC
* * * *
152775 AATATCGTTGGCCTTGAATCAGCATATTGGCACCCTCATCTTTTAAGCCCAATGTCGCTGGCCTT
1 AATATCGCTGGCCTTGAATCAGCATATTGGCACCTTCATC-TTTAAGTCCAATGTAGCTGGCCTT
*
152840 GAATCAGCACATTGGCACCTTTAAGTCT
65 GAATCAGCACATTGGCACCTTTAAGTCC
* * * * * *
152868 AATATCGCTAGCCTTGAATCAGCATGTTGGCGCCTTTGTCATCTTTAAGTCCAATATCGTTGGCC
1 AATATCGCTGGCCTTGAATCAGCATATTGGCACC--T-TCATCTTTAAGTCCAATGTAGCTGGCC
* *
152933 TTGAATCAGCATATTGGTGTCTTTGTCATCTTTAAGTCC
63 TTGAATCAGCACA-T--TG-----G-CACCTTTAAGTCC
* *
152972 AATGTCGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTTTAA
1 AATATCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTTAA
153017 CATGCCTAAG
Statistics
Matches: 374, Mismatches: 39, Indels: 17
0.87 0.09 0.04
Matches are distributed among these distances:
92 207 0.55
93 76 0.20
95 31 0.08
96 6 0.02
98 2 0.01
101 10 0.03
102 1 0.00
103 1 0.00
104 40 0.11
ACGTcount: A:0.24, C:0.25, G:0.19, T:0.32
Consensus pattern (92 bp):
AATATCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATGTAGCTGGCCTTG
AATCAGCACATTGGCACCTTTAAGTCC
Found at i:152936 original size:52 final size:52
Alignment explanation
Indices: 152858--153007 Score: 219
Period size: 52 Copynumber: 2.9 Consensus size: 52
152848 ACATTGGCAC
* * *
152858 CTTTAAGTCTAATATCGCTAGCCTTGAATCAGCATGTTGGCGCCTTTGTCAT
1 CTTTAAGTCCAATATCGCTGGCCTTGAATCAGCATATTGGCGCCTTTGTCAT
* * *
152910 CTTTAAGTCCAATATCGTTGGCCTTGAATCAGCATATTGGTGTCTTTGTCAT
1 CTTTAAGTCCAATATCGCTGGCCTTGAATCAGCATATTGGCGCCTTTGTCAT
* * *
152962 CTTTAAGTCCAATGTCGCTGGCCTTGAATCAGCACATTGGCACCTT
1 CTTTAAGTCCAATATCGCTGGCCTTGAATCAGCATATTGGCGCCTT
153008 CATCTTTAAC
Statistics
Matches: 86, Mismatches: 12, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
52 86 1.00
ACGTcount: A:0.21, C:0.23, G:0.19, T:0.36
Consensus pattern (52 bp):
CTTTAAGTCCAATATCGCTGGCCTTGAATCAGCATATTGGCGCCTTTGTCAT
Found at i:153887 original size:13 final size:13
Alignment explanation
Indices: 153869--153925 Score: 51
Period size: 13 Copynumber: 3.9 Consensus size: 13
153859 CATAAAGTGT
153869 TGTATCGATACAA
1 TGTATCGATACAA
*
153882 TGTATCAATACATAA
1 TGTATCGATAC--AA
153897 GTGTTGTATCGATACAA
1 ----TGTATCGATACAA
153914 TGTATCGATACA
1 TGTATCGATACA
153926 TAAGTTTTGT
Statistics
Matches: 36, Mismatches: 2, Indels: 12
0.72 0.04 0.24
Matches are distributed among these distances:
13 22 0.61
15 2 0.06
17 2 0.06
19 10 0.28
ACGTcount: A:0.37, C:0.14, G:0.16, T:0.33
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:153904 original size:32 final size:32
Alignment explanation
Indices: 153849--153949 Score: 175
Period size: 32 Copynumber: 3.1 Consensus size: 32
153839 TTCAACGATT
153849 TGTATCGATACATAAAGTGTTGTATCGATACAA
1 TGTATCGATACAT-AAGTGTTGTATCGATACAA
*
153882 TGTATCAATACATAAGTGTTGTATCGATACAA
1 TGTATCGATACATAAGTGTTGTATCGATACAA
*
153914 TGTATCGATACATAAGTTTTGTATCGATACAA
1 TGTATCGATACATAAGTGTTGTATCGATACAA
153946 TGTA
1 TGTA
153950 AGCTACTGCC
Statistics
Matches: 65, Mismatches: 3, Indels: 1
0.94 0.04 0.01
Matches are distributed among these distances:
32 53 0.82
33 12 0.18
ACGTcount: A:0.36, C:0.12, G:0.17, T:0.36
Consensus pattern (32 bp):
TGTATCGATACATAAGTGTTGTATCGATACAA
Found at i:153938 original size:19 final size:18
Alignment explanation
Indices: 153847--153944 Score: 81
Period size: 19 Copynumber: 5.8 Consensus size: 18
153837 ATTTCAACGA
153847 TTTGTATCGATACATAAAG
1 TTTGTATCGATACAT-AAG
153866 TGTTGTATCGATAC--AA-
1 T-TTGTATCGATACATAAG
*
153882 --TGTATCAATACATAAG
1 TTTGTATCGATACATAAG
153898 TGTTGTATCGATAC--AA-
1 T-TTGTATCGATACATAAG
153914 --TGTATCGATACATAAG
1 TTTGTATCGATACATAAG
153930 TTTTGTATCGATACA
1 -TTTGTATCGATACA
153945 ATGTAAGCTA
Statistics
Matches: 64, Mismatches: 2, Indels: 26
0.70 0.02 0.28
Matches are distributed among these distances:
13 21 0.33
15 4 0.06
17 4 0.06
19 23 0.36
20 12 0.19
ACGTcount: A:0.35, C:0.12, G:0.16, T:0.37
Consensus pattern (18 bp):
TTTGTATCGATACATAAG
Found at i:154005 original size:13 final size:13
Alignment explanation
Indices: 153987--154011 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
153977 ATTACTTAAA
153987 TGTATCGATACAT
1 TGTATCGATACAT
154000 TGTATCGATACA
1 TGTATCGATACA
154012 CTGATCTTTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:154063 original size:52 final size:52
Alignment explanation
Indices: 154020--154148 Score: 222
Period size: 52 Copynumber: 2.5 Consensus size: 52
154010 CACTGATCTT
154020 TGTATCAATACATGCAGGCAAATTTGCCCAGATGTATCGATACACTATAAAA
1 TGTATCAATACATGCAGGCAAATTTGCCCAGATGTATCGATACACTATAAAA
* * * *
154072 TGTAACGATACATGCAAGCAAATTTGCCCAGATGTATCGATACACTATGAAA
1 TGTATCAATACATGCAGGCAAATTTGCCCAGATGTATCGATACACTATAAAA
154124 TGTATCAATACATGCAGGCAAATTT
1 TGTATCAATACATGCAGGCAAATTT
154149 TCATATTTCG
Statistics
Matches: 70, Mismatches: 7, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
52 70 1.00
ACGTcount: A:0.38, C:0.19, G:0.16, T:0.27
Consensus pattern (52 bp):
TGTATCAATACATGCAGGCAAATTTGCCCAGATGTATCGATACACTATAAAA
Found at i:163246 original size:72 final size:72
Alignment explanation
Indices: 163129--163306 Score: 320
Period size: 72 Copynumber: 2.5 Consensus size: 72
163119 TTTCATTGCT
* *
163129 ATGTATCGATACAATTCATAATGTATCGATACATGCATTTGAAATTATAGCCGTTTATAGCCATT
1 ATGTATCGATGCAATTCATCATGTATCGATACATGCATTTGAAATTATAGCCGTTTATAGCCATT
*
163194 TGAAGCA
66 TAAAGCA
*
163201 ATGTATCGATGCAATTCATCATGTATCGATACATGCATTTGAAATTATAGTCGTTTATAGCCATT
1 ATGTATCGATGCAATTCATCATGTATCGATACATGCATTTGAAATTATAGCCGTTTATAGCCATT
163266 TAAAGCA
66 TAAAGCA
163273 ATGTATCGATGCAATTCATCATGTATCGATACAT
1 ATGTATCGATGCAATTCATCATGTATCGATACAT
163307 TGTATCGATA
Statistics
Matches: 102, Mismatches: 4, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
72 102 1.00
ACGTcount: A:0.34, C:0.16, G:0.15, T:0.35
Consensus pattern (72 bp):
ATGTATCGATGCAATTCATCATGTATCGATACATGCATTTGAAATTATAGCCGTTTATAGCCATT
TAAAGCA
Found at i:163411 original size:19 final size:19
Alignment explanation
Indices: 163367--163422 Score: 76
Period size: 19 Copynumber: 2.9 Consensus size: 19
163357 CTGCCAGTTT
**
163367 CATGTATCGATACAATTGTG
1 CATGTATCGATACAA-TGAA
163387 CATGTATCGATACAATGAA
1 CATGTATCGATACAATGAA
*
163406 CATGTAGCGATACAATG
1 CATGTATCGATACAATG
163423 TATCGGTACA
Statistics
Matches: 33, Mismatches: 3, Indels: 1
0.89 0.08 0.03
Matches are distributed among these distances:
19 18 0.55
20 15 0.45
ACGTcount: A:0.36, C:0.16, G:0.20, T:0.29
Consensus pattern (19 bp):
CATGTATCGATACAATGAA
Found at i:165748 original size:22 final size:20
Alignment explanation
Indices: 165713--165752 Score: 62
Period size: 22 Copynumber: 1.9 Consensus size: 20
165703 GAAAAATTAA
165713 GATAATAAATTTTATTTAGT
1 GATAATAAATTTTATTTAGT
165733 GATAATATAATATTTATTTA
1 GATAATA-AAT-TTTATTTA
165753 TTATTTATTT
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
20 7 0.39
21 3 0.17
22 8 0.44
ACGTcount: A:0.42, C:0.00, G:0.07, T:0.50
Consensus pattern (20 bp):
GATAATAAATTTTATTTAGT
Found at i:165752 original size:4 final size:4
Alignment explanation
Indices: 165743--165788 Score: 51
Period size: 4 Copynumber: 11.2 Consensus size: 4
165733 GATAATATAA
165743 TATT TATT TA-T TATT TATT TATTT TATTT TATTT TATT T-TT TATT T
1 TATT TATT TATT TATT TATT TA-TT TA-TT TA-TT TATT TATT TATT T
165789 TTAAAAATTT
Statistics
Matches: 39, Mismatches: 0, Indels: 6
0.87 0.00 0.13
Matches are distributed among these distances:
3 6 0.15
4 19 0.49
5 14 0.36
ACGTcount: A:0.22, C:0.00, G:0.00, T:0.78
Consensus pattern (4 bp):
TATT
Found at i:166577 original size:4 final size:4
Alignment explanation
Indices: 166558--166607 Score: 57
Period size: 4 Copynumber: 12.8 Consensus size: 4
166548 TTACATCATG
* * * *
166558 AAGA AATA AA-A AAGA AAGA AATA AAGA AATA AAGA AAGC AAGA AAGA
1 AAGA AAGA AAGA AAGA AAGA AAGA AAGA AAGA AAGA AAGA AAGA AAGA
166605 AAG
1 AAG
166608 CAAAATAAGA
Statistics
Matches: 38, Mismatches: 7, Indels: 2
0.81 0.15 0.04
Matches are distributed among these distances:
3 3 0.08
4 35 0.92
ACGTcount: A:0.74, C:0.02, G:0.18, T:0.06
Consensus pattern (4 bp):
AAGA
Found at i:167430 original size:167 final size:164
Alignment explanation
Indices: 167244--167938 Score: 753
Period size: 167 Copynumber: 4.2 Consensus size: 164
167234 ATAGAAATTC
* * * *
167244 AATGACAATATTAGATGAATTTTAAAAATTTTAAACTGAGAAAAATCCCCT-CAAAAACATTTAT
1 AATGATAATATTTGATGAATATTAAAAATTTTGAACTGAG-AAAA-CCCCTCCAAAAACATTTAT
* * ** * * *
167308 GAAATAGAAAACTCAGTTTTTCGGAAATAGAAAAATTTCATGGAAAAAAATAAAAAACTCACGAA
64 GGAATAAAAAACTCAGTTTTTCGGAAATAGAGGAATCTCAAGG-AAAAAATAAAAAACTCATGAA
*
167373 AATAAATGAATTTTTAGAAACTGATTTACTATGATTTA
128 AATAAATGAATTTTTA-AAACTAATTTACTATGATTTA
* * *
167411 AATGATAATATTTGATGAATATT-AAAATTTTGAACTGAGAAACCCCCCTCCGAAAACATTTATC
1 AATGATAATATTTGATGAATATTAAAAATTTTGAACTGAGAAA-ACCCCTCCAAAAACATTTATG
* * * * * *
167475 GAATAAAAAAACTCAGTTTTTTGAAAATAGGGGAATTTCAAGGAAAAAATGAAAAACTAATGAAA
65 GAAT-AAAAAACTCAGTTTTTCGGAAATAGAGGAATCTCAAGGAAAAAATAAAAAACTCATGAAA
* *
167540 ATAAATGAACTTTTTAAAGCTAATTTACTACGATTTA
129 ATAAATGAA-TTTTTAAAACTAATTTACTATGATTTA
* * *
167577 AATGATGATATTTGATGAATATTAAAAATTTTGAACCGAGAAAACCCCTTCAAAAACATTTATGG
1 AATGATAATATTTGATGAATATTAAAAATTTTGAACTGAGAAAACCCCTCCAAAAACATTTATGG
* * * **
167642 AATAAAAAACT-TGTTTTTTGGGAATA-AGGGAATCTCAA-GAAAAAATGTAAAACTCATGAAAA
66 AATAAAAAACTCAGTTTTTCGGAAATAGA-GGAATCTCAAGGAAAAAATAAAAAACTCATGAAAA
* *
167704 TAAATGAATTATTGAAAACCAATTTACTATGATTTA
130 TAAATGAATT-TTTAAAACTAATTTACTATGATTTA
* * * *
167740 AATGATGATATTTGATGAATATTAAAAATTTTGAA-TCGAGAAAACCCTTCCTGAAAGCATTTAT
1 AATGATAATATTTGATGAATATTAAAAATTTTGAACT-GAGAAAACCCCTCC-AAAAACATTTAT
* *
167804 GGAATAAAAAACTCAATTTTTC-GAGAATCAG-GTAATCTCAAGGAAAAAATAAAAAAACTCATG
64 GGAATAAAAAACTCAGTTTTTCGGA-AAT-AGAGGAATCTCAAGGAAAAAAT-AAAAAACTCATG
* * * *
167867 AAAATAAATGAAAATTTCAAAACTAATTAAATAGTGA-TTA
126 AAAATAAATG-AATTTTTAAAACTAATTTACTA-TGATTTA
* * *
167907 GATAATAATATTTGATGGAT-TATAAAAATTTT
1 AATGATAATATTTGATGAATAT-TAAAAATTTT
167939 AATCTGATAA
Statistics
Matches: 451, Mismatches: 59, Indels: 36
0.83 0.11 0.07
Matches are distributed among these distances:
162 2 0.00
163 98 0.22
164 45 0.10
165 33 0.07
166 129 0.29
167 138 0.31
168 6 0.01
ACGTcount: A:0.47, C:0.10, G:0.12, T:0.31
Consensus pattern (164 bp):
AATGATAATATTTGATGAATATTAAAAATTTTGAACTGAGAAAACCCCTCCAAAAACATTTATGG
AATAAAAAACTCAGTTTTTCGGAAATAGAGGAATCTCAAGGAAAAAATAAAAAACTCATGAAAAT
AAATGAATTTTTAAAACTAATTTACTATGATTTA
Found at i:172019 original size:52 final size:52
Alignment explanation
Indices: 171941--172069 Score: 213
Period size: 52 Copynumber: 2.5 Consensus size: 52
171931 CGAAATATAA
* ** *
171941 AAATTTACCTGCATGTATCGATACATTTAATGGTGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTAGGC
*
171993 AAATTTGCCTGCATGTATCGATACATTTTATAATGTATCGATACATCTAGGC
1 AAATTTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTAGGC
172045 AAATTTGCCTGCATGTATCGATACA
1 AAATTTGCCTGCATGTATCGATACA
172070 AAGATCAGTG
Statistics
Matches: 72, Mismatches: 5, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
52 72 1.00
ACGTcount: A:0.30, C:0.18, G:0.17, T:0.35
Consensus pattern (52 bp):
AAATTTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTAGGC
Found at i:172082 original size:52 final size:51
Alignment explanation
Indices: 171941--172089 Score: 201
Period size: 52 Copynumber: 2.9 Consensus size: 51
171931 CGAAATATAA
* * *
171941 AAATTTACCTGCATGTATCGATACATTTAATGGTGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTAGGC
* *
171993 AAATTTGCCTGCATGTATCGATACATTTTATAATGTATCGATACATCTAGGC
1 AAATTTGCCTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTAGGC
*
172045 AAATTTGCCTGCATGTATCGATACA-AAGATCAGTGTATCGATACA
1 AAATTTGCCTGCATGTATCGATACATTA-AT-AGTGTATCGATACA
172090 ATGTATCGAT
Statistics
Matches: 87, Mismatches: 8, Indels: 4
0.88 0.08 0.04
Matches are distributed among these distances:
51 2 0.02
52 85 0.98
ACGTcount: A:0.32, C:0.17, G:0.17, T:0.34
Consensus pattern (51 bp):
AAATTTGCCTGCATGTATCGATACATTAATAGTGTATCGATACATCTAGGC
Found at i:172096 original size:13 final size:13
Alignment explanation
Indices: 172078--172102 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
172068 CAAAGATCAG
172078 TGTATCGATACAA
1 TGTATCGATACAA
172091 TGTATCGATACA
1 TGTATCGATACA
172103 TTTGAGTAAT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:172182 original size:13 final size:13
Alignment explanation
Indices: 172164--172188 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
172154 ACAAAAAAAA
172164 TGTATCGATACAT
1 TGTATCGATACAT
172177 TGTATCGATACA
1 TGTATCGATACA
172189 ACACTTTAAT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:173140 original size:55 final size:52
Alignment explanation
Indices: 173057--173581 Score: 418
Period size: 43 Copynumber: 10.9 Consensus size: 52
173047 GAAAAGTGAT
* * * * *
173057 AAAA-ATGCCAATATGTTGATTCACGGCCAACGATATTGGGCTTAAAGATGAG
1 AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATG-G
* * * *
173109 AAAAAAGATGTCAATGTGCTGATTCAAGGCCAGCTACATTGTACTTAAAGATGG
1 --AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
*
173163 AAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTT-AA-A--G
1 AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
* *
173211 ----G-TGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-G
1 AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
*
173257 --AAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTT-AA-A--G
1 AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
* *
173303 ----G-TGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-G
1 AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
** *
173349 ACAAAGGCGCCAATATGCTGATTCAAGGCCAGCGATATTGGACTT---GA-GG
1 A-AAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
* * *
173398 ----G-TGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTGAAGATGG
1 AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
* * *
173445 AAAAGGTGACAATATGCTGATTCAAGGCCAGCAATATTGGACTTAAAG-T--
1 AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
* * * *
173494 ------CGCCAATGTGCTGATTCAAGGCCAGCTACATTAGACTTAAAGA---
1 AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
* * * *
173537 AGAAGGTGCCAATATGCTGATTCAAGGCCAGCGATATTGGGCTTA
1 AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTA
173582 GAAGGGTTGC
Statistics
Matches: 393, Mismatches: 45, Indels: 71
0.77 0.09 0.14
Matches are distributed among these distances:
43 142 0.36
44 7 0.02
45 2 0.01
46 5 0.01
47 3 0.01
48 4 0.01
49 72 0.18
50 1 0.00
51 5 0.01
52 110 0.28
54 5 0.01
55 37 0.09
ACGTcount: A:0.32, C:0.18, G:0.25, T:0.25
Consensus pattern (52 bp):
AAAAGATGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGG
Found at i:173183 original size:228 final size:229
Alignment explanation
Indices: 172765--173192 Score: 648
Period size: 228 Copynumber: 1.9 Consensus size: 229
172755 GTTTTGCAAT
* * *
172765 GTGCCACTATGCAGATTCAAGGCCTGCAACACTGGACTTAAAGATGATGAGGATGAAGAGTGATA
1 GTGCCAATATGCAGATTCAAGGCCTGCAACACTGGACTTAAAGATGAAGAGGATGAAAAGTGATA
* *
172830 AAAGGACCAATACGTTGATTCACGGCCAACGATATTGGGTTTAAAGATGAGAAAAAGGATGTCAA
66 AAAGGACCAATACGTTGATTCACGGCCAACGATATTGGGCTTAAAGATGAGAAAAAAGATGTCAA
* * * *
172895 TGTGCTGATTCACGGTCAGCGACATTAGACTTGAAGATGAGAAAAATGCCAATGTGCTGATTCAA
131 TGTGCTGATTCAAGGCCAGCGACATTAGACTTAAAGATGAGAAAAATGCCAATATGCTGATTCAA
172960 GGCCAACAACATTTGGGTTTTAAAGATGATGAAG
196 GGCCAACAACATTTGGGTTTTAAAGATGATGAAG
* * * *
172994 GTGCCAATATGCTGATTCAAGGCCTGCAATATTGGACTTAAAGATGAAGATGA-GAAAAGTGATA
1 GTGCCAATATGCAGATTCAAGGCCTGCAACACTGGACTTAAAGATGAAGAGGATGAAAAGTGAT-
* *
173058 AAAATG-CCAATATGTTGATTCACGGCCAACGATATTGGGCTTAAAGATGAGAAAAAAGATGTCA
65 AAAAGGACCAATACGTTGATTCACGGCCAACGATATTGGGCTTAAAGATGAGAAAAAAGATGTCA
* *
173122 ATGTGCTGATTCAAGGCCAGCTACATT-GTACTTAAAGATG-GAAAAGGTGCCAATATGCTGATT
130 ATGTGCTGATTCAAGGCCAGCGACATTAG-ACTTAAAGATGAGAAAA-ATGCCAATATGCTGATT
173185 CAAGGCCA
193 CAAGGCCA
173193 GCTATATTGG
Statistics
Matches: 179, Mismatches: 17, Indels: 7
0.88 0.08 0.03
Matches are distributed among these distances:
227 6 0.03
228 121 0.68
229 52 0.29
ACGTcount: A:0.36, C:0.15, G:0.25, T:0.24
Consensus pattern (229 bp):
GTGCCAATATGCAGATTCAAGGCCTGCAACACTGGACTTAAAGATGAAGAGGATGAAAAGTGATA
AAAGGACCAATACGTTGATTCACGGCCAACGATATTGGGCTTAAAGATGAGAAAAAAGATGTCAA
TGTGCTGATTCAAGGCCAGCGACATTAGACTTAAAGATGAGAAAAATGCCAATATGCTGATTCAA
GGCCAACAACATTTGGGTTTTAAAGATGATGAAG
Found at i:173425 original size:95 final size:94
Alignment explanation
Indices: 173120--173586 Score: 746
Period size: 95 Copynumber: 5.0 Consensus size: 94
173110 AAAAAGATGT
*
173120 CAATGTGCTGATTCAAGGCCAGCTACATTGTACTTAAAGATGGAAAAGGTGCCAATATGCTGATT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-GAAAAGGTGCCAATATGCTGATT
*
173185 CAAGGCCAGCTATATTGGACTTAAAGGTGC
65 CAAGGCCAGCGATATTGGACTTAAAGGTGC
173215 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATG--AAGGTGCCAATATGCTGATTC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAAAGGTGCCAATATGCTGATTC
*
173278 AAGGCCAGCTATATTGGACTTAAAGGTGC
66 AAGGCCAGCGATATTGGACTTAAAGGTGC
*
173307 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGACAAAGGCGCCAATATGCTGATT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGA-AAAGGTGCCAATATGCTGATT
* *
173372 CAAGGCCAGCGATATTGGACTTGAGGGTGC
65 CAAGGCCAGCGATATTGGACTTAAAGGTGC
* *
173402 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTGAAGATGGAAAAGGTGACAATATGCTGATT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-GAAAAGGTGCCAATATGCTGATT
*
173467 CAAGGCCAGCAATATTGGACTTAAA-GTCGC
65 CAAGGCCAGCGATATTGGACTTAAAGGT-GC
* *
173497 CAATGTGCTGATTCAAGGCCAGCTACATTAGACTTAAAGA--AGAAGGTGCCAATATGCTGATTC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAAAGGTGCCAATATGCTGATTC
*
173560 AAGGCCAGCGATATTGGGCTTAGAAGG
66 AAGGCCAGCGATATTGGACTTA-AAGG
173587 GTTGCCACCG
Statistics
Matches: 348, Mismatches: 17, Indels: 15
0.92 0.04 0.04
Matches are distributed among these distances:
92 133 0.38
93 2 0.01
94 4 0.01
95 207 0.59
96 2 0.01
ACGTcount: A:0.31, C:0.18, G:0.26, T:0.25
Consensus pattern (94 bp):
CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAAAGGTGCCAATATGCTGATTC
AAGGCCAGCGATATTGGACTTAAAGGTGC
Found at i:173435 original size:187 final size:188
Alignment explanation
Indices: 173120--173586 Score: 755
Period size: 187 Copynumber: 2.5 Consensus size: 188
173110 AAAAAGATGT
*
173120 CAATGTGCTGATTCAAGGCCAGCTACATTGTACTTAAAGATGGAAAAGGTGCCAATATGCTGATT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-GAAAAGGTGCCAATATGCTGATT
*
173185 CAAGGCCAGCTATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
65 CAAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
* *
173250 AAAGAT-G-AAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGGT-GC
130 AAAGATGGAAAGGTGACAATATGCTGATTCAAGGCCAGCAATATTGGACTTAAA-GTCGC
*
173307 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGACAAAGGCGCCAATATGCTGATT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGA-AAAGGTGCCAATATGCTGATT
* *
173372 CAAGGCCAGCGATATTGGACTTGAGGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
65 CAAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
*
173437 GAAGATGGAAAAGGTGACAATATGCTGATTCAAGGCCAGCAATATTGGACTTAAAGTCGC
130 AAAGATGG-AAAGGTGACAATATGCTGATTCAAGGCCAGCAATATTGGACTTAAAGTCGC
* *
173497 CAATGTGCTGATTCAAGGCCAGCTACATTAGACTTAAAGA--AGAAGGTGCCAATATGCTGATTC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAAAGGTGCCAATATGCTGATTC
*
173560 AAGGCCAGCGATATTGGGCTTAGAAGG
66 AAGGCCAGCGATATTGGACTTA-AAGG
173587 GTTGCCACCG
Statistics
Matches: 260, Mismatches: 14, Indels: 11
0.91 0.05 0.04
Matches are distributed among these distances:
186 2 0.01
187 167 0.64
188 5 0.02
189 2 0.01
190 84 0.32
ACGTcount: A:0.31, C:0.18, G:0.26, T:0.25
Consensus pattern (188 bp):
CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAAAGGTGCCAATATGCTGATTC
AAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTA
AAGATGGAAAGGTGACAATATGCTGATTCAAGGCCAGCAATATTGGACTTAAAGTCGC
Found at i:173664 original size:33 final size:34
Alignment explanation
Indices: 173622--173857 Score: 165
Period size: 36 Copynumber: 7.0 Consensus size: 34
173612 AGAAAGGGTG
173622 AAAGA-TGCCACGAAGTTGTGGAC-TTAAAAAGA
1 AAAGAGTGCCACGAAGTTGTGGACTTTAAAAAGA
* *
173654 ATAAG-GTGCCAC-AGAGTTGTGGGCTTTAAAAGGGAA
1 A-AAGAGTGCCACGA-AGTTGTGGACTTTAAAA-AG-A
*
173690 AAAGAGTGCCACGAAGTTGTAGG-CTTTGAAAAG-
1 AAAGAGTGCCACGAAGTTGT-GGACTTTAAAAAGA
* * * *
173723 -AAG-GTGCCACGGAGTCGTGAAC-TTAAAAGGA
1 AAAGAGTGCCACGAAGTTGTGGACTTTAAAAAGA
**
173754 ATAAG-GTGCCACGGGGTTGTGGACTTTAAAAGGAGA
1 A-AAGAGTGCCACGAAGTTGTGGACTTTAAAA--AGA
* * *
173790 AAAGAGTGCCAC-AGAGTTGTGGGC-TTAGAAGGAA
1 AAAGAGTGCCACGA-AGTTGTGGACTTTAAAAAG-A
*
173824 AAAGAGTGCCAC-AGAGTTGTGGGCTTTAAAAAGA
1 AAAGAGTGCCACGA-AGTTGTGGACTTTAAAAAGA
173858 GATTTGAAGA
Statistics
Matches: 164, Mismatches: 20, Indels: 38
0.74 0.09 0.17
Matches are distributed among these distances:
30 7 0.04
31 14 0.09
32 5 0.03
33 38 0.23
34 38 0.23
35 19 0.12
36 40 0.24
37 3 0.02
ACGTcount: A:0.36, C:0.12, G:0.32, T:0.20
Consensus pattern (34 bp):
AAAGAGTGCCACGAAGTTGTGGACTTTAAAAAGA
Found at i:173702 original size:69 final size:67
Alignment explanation
Indices: 173622--173857 Score: 261
Period size: 69 Copynumber: 3.5 Consensus size: 67
173612 AGAAAGGGTG
173622 AAAGA-TGCCACGAAGTTGTGGAC-TTAAAAAGAATAAGGTGCCACAGAGTTGTGGGCTTTAAAA
1 AAAGAGTGCCACGAAGTTGTGGACTTTAAAAAGAA-AAGGTGCCACAGAGTTGTGGGC-TTAAAA
173685 GGGAA
64 -GGAA
* * * **
173690 AAAGAGTGCCACGAAGTTGTAGG-CTTTGAAAAG--AAGGTGCCACGGAGTCGTGAACTTAAAAG
1 AAAGAGTGCCACGAAGTTGT-GGACTTTAAAAAGAAAAGGTGCCACAGAGTTGTGGGCTTAAAAG
173752 GAA
65 GAA
* ** *
173755 TAAG-GTGCCACGGGGTTGTGGACTTTAAAAGGAGAAAAGAGTGCCACAGAGTTGTGGGCTTAGA
1 AAAGAGTGCCACGAAGTTGTGGACTTTAAAA--AGAAAAG-GTGCCACAGAGTTGTGGGCTTAAA
173819 AGGAA
63 AGGAA
*
173824 AAAGAGTGCCAC-AGAGTTGTGGGCTTTAAAAAGA
1 AAAGAGTGCCACGA-AGTTGTGGACTTTAAAAAGA
173858 GATTTGAAGA
Statistics
Matches: 139, Mismatches: 18, Indels: 22
0.78 0.10 0.12
Matches are distributed among these distances:
63 2 0.01
64 20 0.14
65 7 0.05
66 8 0.06
67 18 0.13
68 11 0.08
69 42 0.30
70 31 0.22
ACGTcount: A:0.36, C:0.12, G:0.32, T:0.20
Consensus pattern (67 bp):
AAAGAGTGCCACGAAGTTGTGGACTTTAAAAAGAAAAGGTGCCACAGAGTTGTGGGCTTAAAAGG
AA
Found at i:173756 original size:100 final size:100
Alignment explanation
Indices: 173627--173815 Score: 274
Period size: 100 Copynumber: 1.9 Consensus size: 100
173617 GGGTGAAAGA
* * *
173627 TGCCACGAAGTTGTGGACTTAAAAAGAATAAGGTGCCACAGAGTTGTGGGCTTTAAAAGG-GAAA
1 TGCCACGAAGTCGTGAACTTAAAAAGAATAAGGTGCCACAGAGTTGTGGACTTTAAAAGGAG-AA
173691 AAGAGTGCCAC-GAAGTTGTAGGCTTTGAAAAGAAGG
65 AAGAGTGCCACAG-AGTTGTAGGCTTTGAAAAGAAGG
* * * *
173727 TGCCACGGAGTCGTGAACTTAAAAGGAATAAGGTGCCACGGGGTTGTGGACTTTAAAAGGAGAAA
1 TGCCACGAAGTCGTGAACTTAAAAAGAATAAGGTGCCACAGAGTTGTGGACTTTAAAAGGAGAAA
*
173792 AGAGTGCCACAGAGTTGTGGGCTT
66 AGAGTGCCACAGAGTTGTAGGCTT
173816 AGAAGGAAAA
Statistics
Matches: 79, Mismatches: 8, Indels: 4
0.87 0.09 0.04
Matches are distributed among these distances:
100 77 0.97
101 2 0.03
ACGTcount: A:0.33, C:0.13, G:0.32, T:0.21
Consensus pattern (100 bp):
TGCCACGAAGTCGTGAACTTAAAAAGAATAAGGTGCCACAGAGTTGTGGACTTTAAAAGGAGAAA
AGAGTGCCACAGAGTTGTAGGCTTTGAAAAGAAGG
Found at i:173827 original size:34 final size:34
Alignment explanation
Indices: 173622--173854 Score: 203
Period size: 34 Copynumber: 6.9 Consensus size: 34
173612 AGAAAGGGTG
* *
173622 AAAGA-TGCCAC-GAAGTTGTGGACTTAAAAAGAA
1 AAAGAGTGCCACAG-AGTTGTGGGCTTAAAAGGAA
*
173655 TAAG-GTGCCACAGAGTTGTGGGCTTTAAAAGGGAA
1 AAAGAGTGCCACAGAGTTGTGGGC-TTAAAA-GGAA
* **
173690 AAAGAGTGCCAC-GAAGTTGTAGGCTTTGAA--AA
1 AAAGAGTGCCACAG-AGTTGTGGGCTTAAAAGGAA
* * * **
173722 GAAG-GTGCCACGGAGTCGTGAACTTAAAAGGAA
1 AAAGAGTGCCACAGAGTTGTGGGCTTAAAAGGAA
* * * *
173755 TAAG-GTGCCACGGGGTTGTGGACTTTAAAAGGAGA
1 AAAGAGTGCCACAGAGTTGTGGGC-TTAAAAGGA-A
*
173790 AAAGAGTGCCACAGAGTTGTGGGCTTAGAAGGAA
1 AAAGAGTGCCACAGAGTTGTGGGCTTAAAAGGAA
173824 AAAGAGTGCCACAGAGTTGTGGGCTTTAAAA
1 AAAGAGTGCCACAGAGTTGTGGGC-TTAAAA
173855 AGAGATTTGA
Statistics
Matches: 163, Mismatches: 24, Indels: 24
0.77 0.11 0.11
Matches are distributed among these distances:
31 17 0.10
32 6 0.04
33 39 0.24
34 41 0.25
35 28 0.17
36 32 0.20
ACGTcount: A:0.36, C:0.12, G:0.32, T:0.20
Consensus pattern (34 bp):
AAAGAGTGCCACAGAGTTGTGGGCTTAAAAGGAA
Found at i:174793 original size:1 final size:1
Alignment explanation
Indices: 174787--174850 Score: 56
Period size: 1 Copynumber: 64.0 Consensus size: 1
174777 TGAAAAGGGG
* * * * * * * *
174787 TTTTTTTTTCTTCTTTTTTTTTTGTTTTTGTTTTGTTTTTTTTCTCTTTTTTTTTCTTTTTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
174851 GTGAAGATTA
Statistics
Matches: 47, Mismatches: 16, Indels: 0
0.75 0.25 0.00
Matches are distributed among these distances:
1 47 1.00
ACGTcount: A:0.00, C:0.08, G:0.05, T:0.88
Consensus pattern (1 bp):
T
Found at i:174805 original size:11 final size:10
Alignment explanation
Indices: 174789--174850 Score: 70
Period size: 11 Copynumber: 5.8 Consensus size: 10
174779 AAAAGGGGTT
174789 TTTTTTTCTTC
1 TTTTTTT-TTC
*
174800 TTTTTTTTTTG
1 -TTTTTTTTTC
*
174811 TTTTTGTTTTG
1 TTTTT-TTTTC
174822 TTTTTTTTCTC
1 TTTTTTTT-TC
174833 TTTTTTTTTC
1 TTTTTTTTTC
174843 TTTTTTTT
1 TTTTTTTT
174851 GTGAAGATTA
Statistics
Matches: 46, Mismatches: 2, Indels: 6
0.85 0.04 0.11
Matches are distributed among these distances:
10 18 0.39
11 21 0.46
12 7 0.15
ACGTcount: A:0.00, C:0.08, G:0.05, T:0.87
Consensus pattern (10 bp):
TTTTTTTTTC
Found at i:174839 original size:35 final size:35
Alignment explanation
Indices: 174786--174852 Score: 102
Period size: 35 Copynumber: 1.9 Consensus size: 35
174776 GTGAAAAGGG
174786 GTTTTTTTTTCTTCTTTTTTT-TTTGTTTTTGTTTT
1 GTTTTTTTTTCTTCTTTTTTTCTTT-TTTTTGTTTT
174821 GTTTTTTTTCTCTT-TTTTTTTCTTTTTTTTGT
1 GTTTTTTTT-TCTTCTTTTTTTCTTTTTTTTGT
174853 GAAGATTATG
Statistics
Matches: 30, Mismatches: 0, Indels: 4
0.88 0.00 0.12
Matches are distributed among these distances:
35 23 0.77
36 7 0.23
ACGTcount: A:0.00, C:0.07, G:0.07, T:0.85
Consensus pattern (35 bp):
GTTTTTTTTTCTTCTTTTTTTCTTTTTTTTGTTTT
Found at i:175195 original size:7 final size:7
Alignment explanation
Indices: 175183--175244 Score: 76
Period size: 7 Copynumber: 9.1 Consensus size: 7
175173 TTTTTTTGTG
175183 TGTTTTT
1 TGTTTTT
175190 TGTTTTT
1 TGTTTTT
*
175197 T-TGTTT
1 TGTTTTT
175203 TGTTTTTT
1 TG-TTTTT
175211 TGTTTTT
1 TGTTTTT
175218 TGTTTTT
1 TGTTTTT
*
175225 T-TTTTG
1 TGTTTTT
175231 T-TTTTT
1 TGTTTTT
175237 TGTTTTT
1 TGTTTTT
175244 T
1 T
175245 TTTGTTTACT
Statistics
Matches: 48, Mismatches: 4, Indels: 6
0.83 0.07 0.10
Matches are distributed among these distances:
6 15 0.31
7 27 0.56
8 6 0.12
ACGTcount: A:0.00, C:0.00, G:0.13, T:0.87
Consensus pattern (7 bp):
TGTTTTT
Found at i:175197 original size:19 final size:19
Alignment explanation
Indices: 175173--175251 Score: 108
Period size: 19 Copynumber: 4.2 Consensus size: 19
175163 CCTTTGCACC
*
175173 TTTTTTTGTGTGTTTTTTG
1 TTTTTTTGTTTGTTTTTTG
175192 TTTTTTTGTTTTGTTTTTT-
1 TTTTTTTG-TTTGTTTTTTG
*
175211 TGTTTTTTGTTTTTTTTTTG
1 T-TTTTTTGTTTGTTTTTTG
175231 TTTTTTTGTTT-TTTTTTG
1 TTTTTTTGTTTGTTTTTTG
175249 TTT
1 TTT
175252 ACTTTTGACT
Statistics
Matches: 55, Mismatches: 2, Indels: 7
0.86 0.03 0.11
Matches are distributed among these distances:
18 10 0.18
19 28 0.51
20 17 0.31
ACGTcount: A:0.00, C:0.00, G:0.14, T:0.86
Consensus pattern (19 bp):
TTTTTTTGTTTGTTTTTTG
Found at i:175216 original size:26 final size:25
Alignment explanation
Indices: 175187--175247 Score: 95
Period size: 26 Copynumber: 2.4 Consensus size: 25
175177 TTTGTGTGTT
175187 TTTTGTTTTTTTGTTTTGTTTTTTTG
1 TTTT-TTTTTTTGTTTTGTTTTTTTG
*
175213 TTTTTTGTTTTTTTTTTGTTTTTTTG
1 TTTTTT-TTTTTGTTTTGTTTTTTTG
175239 TTTTTTTTT
1 TTTTTTTTT
175248 GTTTACTTTT
Statistics
Matches: 33, Mismatches: 1, Indels: 3
0.89 0.03 0.08
Matches are distributed among these distances:
25 5 0.15
26 28 0.85
ACGTcount: A:0.00, C:0.00, G:0.11, T:0.89
Consensus pattern (25 bp):
TTTTTTTTTTTGTTTTGTTTTTTTG
Found at i:175217 original size:39 final size:38
Alignment explanation
Indices: 175174--175247 Score: 121
Period size: 39 Copynumber: 1.9 Consensus size: 38
175164 CTTTGCACCT
175174 TTTTTTGTGTGTTTTTTGTTTTTTTGTTTTGTTTTTTTG
1 TTTTTTGTGTGTTTTTTGTTTTTTTGTTTT-TTTTTTTG
* *
175213 TTTTTTGTTTTTTTTTTGTTTTTTTGTTTTTTTTT
1 TTTTTTGTGTGTTTTTTGTTTTTTTGTTTTTTTTT
175248 GTTTACTTTT
Statistics
Matches: 33, Mismatches: 2, Indels: 1
0.92 0.06 0.03
Matches are distributed among these distances:
38 5 0.15
39 28 0.85
ACGTcount: A:0.00, C:0.00, G:0.14, T:0.86
Consensus pattern (38 bp):
TTTTTTGTGTGTTTTTTGTTTTTTTGTTTTTTTTTTTG
Found at i:175258 original size:10 final size:8
Alignment explanation
Indices: 175174--175245 Score: 78
Period size: 8 Copynumber: 8.9 Consensus size: 8
175164 CTTTGCACCT
175174 TTTTTTGTG
1 TTTTTT-TG
175183 TGTTTTTTG
1 T-TTTTTTG
175192 TTTTTTTG
1 TTTTTTTG
175200 ---TTTTG
1 TTTTTTTG
175205 TTTTTTTG
1 TTTTTTTG
*
175213 TTTTTTGTTT
1 -TTTTT-TTG
175223 TTTTTTTG
1 TTTTTTTG
175231 TTTTTTTG
1 TTTTTTTG
175239 TTTTTTT
1 TTTTTTT
175246 TTGTTTACTT
Statistics
Matches: 55, Mismatches: 2, Indels: 13
0.79 0.03 0.19
Matches are distributed among these distances:
5 5 0.09
8 29 0.53
9 14 0.25
10 7 0.13
ACGTcount: A:0.00, C:0.00, G:0.14, T:0.86
Consensus pattern (8 bp):
TTTTTTTG
Found at i:175265 original size:1 final size:1
Alignment explanation
Indices: 175185--175247 Score: 63
Period size: 1 Copynumber: 63.0 Consensus size: 1
175175 TTTTTGTGTG
* * * * * * *
175185 TTTTTTGTTTTTTTGTTTTGTTTTTTTGTTTTTTGTTTTTTTTTTGTTTTTTTGTTTTTTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
175248 GTTTACTTTT
Statistics
Matches: 48, Mismatches: 14, Indels: 0
0.77 0.23 0.00
Matches are distributed among these distances:
1 48 1.00
ACGTcount: A:0.00, C:0.00, G:0.11, T:0.89
Consensus pattern (1 bp):
T
Found at i:175265 original size:39 final size:39
Alignment explanation
Indices: 175185--175265 Score: 103
Period size: 39 Copynumber: 2.1 Consensus size: 39
175175 TTTTTGTGTG
* **
175185 TTTTTTGTTTTTTTGTTTTGTTTTTTTGTTTTTTGTTTT
1 TTTTTTGTTTTTTTGTTTTGTTTTTTTGTCTTTTGACTT
175224 TTTTTTGTTTTTTTGTTTT-TTTTTGTT-TACTTTTGACTT
1 TTTTTTGTTTTTTTGTTTTGTTTTT-TTGT-CTTTTGACTT
175263 TTT
1 TTT
175266 CATCATCATT
Statistics
Matches: 37, Mismatches: 3, Indels: 4
0.84 0.07 0.09
Matches are distributed among these distances:
38 6 0.16
39 31 0.84
ACGTcount: A:0.02, C:0.02, G:0.11, T:0.84
Consensus pattern (39 bp):
TTTTTTGTTTTTTTGTTTTGTTTTTTTGTCTTTTGACTT
Done.