Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold225
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 857989
ACGTcount: A:0.32, C:0.18, G:0.17, T:0.33
File 4 of 5
Found at i:597820 original size:9 final size:9
Alignment explanation
Indices: 597808--597868 Score: 65
Period size: 9 Copynumber: 7.1 Consensus size: 9
597798 CTCTCTCTAT
597808 TATCTCTCC
1 TATCTCTCC
597817 TATCTCTCC
1 TATCTCTCC
* *
597826 T-CCTAT-C
1 TATCTCTCC
*
597833 -ATCCCTCC
1 TATCTCTCC
*
597841 TATCTCTAC
1 TATCTCTCC
597850 TATCTCTCC
1 TATCTCTCC
597859 TATCTCTCC
1 TATCTCTCC
597868 T
1 T
597869 CCTATCATCC
Statistics
Matches: 41, Mismatches: 8, Indels: 6
0.75 0.15 0.11
Matches are distributed among these distances:
7 3 0.07
8 4 0.10
9 34 0.83
ACGTcount: A:0.13, C:0.44, G:0.00, T:0.43
Consensus pattern (9 bp):
TATCTCTCC
Found at i:597828 original size:12 final size:12
Alignment explanation
Indices: 597813--597889 Score: 71
Period size: 12 Copynumber: 6.9 Consensus size: 12
597803 TCTATTATCT
597813 CTCCTATCTCTC
1 CTCCTATCTCTC
597825 CTCCTATCATC-C
1 CTCCTATC-TCTC
597837 CTCCTA--TCT-
1 CTCCTATCTCTC
*
597846 CTACTA--TCT-
1 CTCCTATCTCTC
597855 CTCCTATCTCTC
1 CTCCTATCTCTC
597867 CTCCTATCATC-C
1 CTCCTATC-TCTC
597879 CTCCTATCTCT
1 CTCCTATCTCT
597890 TTTTTTTTTT
Statistics
Matches: 56, Mismatches: 2, Indels: 14
0.78 0.03 0.19
Matches are distributed among these distances:
9 15 0.27
11 5 0.09
12 32 0.57
13 4 0.07
ACGTcount: A:0.13, C:0.47, G:0.00, T:0.40
Consensus pattern (12 bp):
CTCCTATCTCTC
Found at i:597831 original size:24 final size:22
Alignment explanation
Indices: 597797--597889 Score: 95
Period size: 24 Copynumber: 4.2 Consensus size: 22
597787 AATCATCCCT
* *
597797 TCTCTCTCTATTATCTCTCCTA
1 TCTCTCTCTATCATCCCTCCTA
597819 TCTCTCCTCCTATCATCCCTCCTA
1 TCTCT-CT-CTATCATCCCTCCTA
*
597843 TCTCT-ACTATC-T--CTCCTA
1 TCTCTCTCTATCATCCCTCCTA
597861 TCTCTCCTCCTATCATCCCTCCTA
1 TCTCT-CT-CTATCATCCCTCCTA
597885 TCTCT
1 TCTCT
597890 TTTTTTTTTT
Statistics
Matches: 59, Mismatches: 4, Indels: 14
0.77 0.05 0.18
Matches are distributed among these distances:
18 11 0.19
20 1 0.02
21 10 0.17
22 6 0.10
23 2 0.03
24 29 0.49
ACGTcount: A:0.13, C:0.44, G:0.00, T:0.43
Consensus pattern (22 bp):
TCTCTCTCTATCATCCCTCCTA
Found at i:597834 original size:42 final size:42
Alignment explanation
Indices: 597780--597889 Score: 184
Period size: 42 Copynumber: 2.6 Consensus size: 42
597770 TTCTTCTCTC
* * * *
597780 CTCCTCCAATCATCCCTTCTCTCTCTATTATCTCTCCTATCT
1 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTATCT
597822 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTATCT
1 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTATCT
597864 CTCCTCCTATCATCCCTCCTATCTCT
1 CTCCTCCTATCATCCCTCCTATCTCT
597890 TTTTTTTTTT
Statistics
Matches: 64, Mismatches: 4, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
42 64 1.00
ACGTcount: A:0.14, C:0.45, G:0.00, T:0.41
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTATCT
Found at i:600310 original size:403 final size:404
Alignment explanation
Indices: 599555--600335 Score: 1154
Period size: 403 Copynumber: 1.9 Consensus size: 404
599545 GTTTCATAAG
* * * * *
599555 AAAGGCTTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGATAGACATGG
1 AAAGGCTTTTTTTCCCACCAATTTTTCTAAAGTCTAAGTTCATGCCTCAAAAGAGACAAACATGA
* * * * *
599620 ATTCTAGTAATGATCTTCATTCATTGGGCGATTTGGCACTATAAACATATTCTCCTCGTTAGGAT
66 ATTCTAGTAACGATCTTCACTCATTGGGCGATTTGGCACAATAAACACATTCTCCTCATTAGGAT
* * *
599685 AAATGATATTGATGATTTTCTTTTGCATGGAATTCTTTTCTTTTCCCTATATTCCTTAAAATCAA
131 AAACGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATATTCCTTAAAATCAA
* * * *
599750 AGTTCATCCCTTAAATATGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGAG
196 AGTTCATCCCTTAAATAAGGCAAGCATCGATTCCCATAACAATCTCCATTCTGTTCAAGATTGAG
* * * *
599815 AAGCGAAAACACATTTCCTTCATTAGGACGCGTGACATTGAAGCTTTGGTGGGGCAAGAAAAGCT
261 AAGCCAAAACACATTCCCTTCATTAGGACGCATGACATTGAAGCTTTGGTGGGACAAGAAAAGCT
* *
599880 TTTCTTTCCACCGTTTTCAAAAGAATCAAAGTTTGTCTCTTAAATAAGACAAATCAAATTGGTGT
326 TTTCTTTCCACCGTTTTAAAAAGAATCAAAATTTGTCTCTTAAATAAGACAAATCAAATTGGTGT
599945 TTTAGCTTCAAAAA
391 TTTAGCTTCAAAAA
* *
599959 AAAGGC-TTTTTTCCCACCAATTTTTCTAAAGTCTAAGTTCATGCCTTAAAATAGACAAACATGA
1 AAAGGCTTTTTTTCCCACCAATTTTTCTAAAGTCTAAGTTCATGCCTCAAAAGAGACAAACATGA
* *
600023 ATTCTAGTAACGATCTTCACTCATTTGGTGATTTGGCACAATAAACACATTCTCCTCATTAGGAT
66 ATTCTAGTAACGATCTTCACTCATTGGGCGATTTGGCACAATAAACACATTCTCCTCATTAGGAT
* *
600088 AAACGATGTTGATGATTTTCTTTT-CTATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
131 AAACGATATTGATGATTTTCTTTTGC-ATGGAAATCTTTTCTTTGCCCTATATTCCTTAAAATCA
* * * *
600152 AAGTTCATCCTTTAAATAAGGCAAGCTTCGATTCCCATAACAATCTCCGTTCTGTTCAAGATTGG
195 AAGTTCATCCCTTAAATAAGGCAAGCATCGATTCCCATAACAATCTCCATTCTGTTCAAGATTGA
* * * ** * *
600217 GAAGCCAAAACACATTCCCTTCATTTGGAGGCATGACATTGGAGCTTTGGTGTTACAGGAAATGC
260 GAAGCCAAAACACATTCCCTTCATTAGGACGCATGACATTGAAGCTTTGGTGGGACAAGAAAAGC
*
600282 TTTTCTTTCCATCG-TTTAAAATAGAATCAAAATTTGTCTCTTAAATAAGACAAA
325 TTTTCTTTCCACCGTTTTAAAA-AGAATCAAAATTTGTCTCTTAAATAAGACAAA
600336 CATGAATACT
Statistics
Matches: 334, Mismatches: 41, Indels: 5
0.88 0.11 0.01
Matches are distributed among these distances:
402 7 0.02
403 321 0.96
404 6 0.02
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (404 bp):
AAAGGCTTTTTTTCCCACCAATTTTTCTAAAGTCTAAGTTCATGCCTCAAAAGAGACAAACATGA
ATTCTAGTAACGATCTTCACTCATTGGGCGATTTGGCACAATAAACACATTCTCCTCATTAGGAT
AAACGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATATTCCTTAAAATCAA
AGTTCATCCCTTAAATAAGGCAAGCATCGATTCCCATAACAATCTCCATTCTGTTCAAGATTGAG
AAGCCAAAACACATTCCCTTCATTAGGACGCATGACATTGAAGCTTTGGTGGGACAAGAAAAGCT
TTTCTTTCCACCGTTTTAAAAAGAATCAAAATTTGTCTCTTAAATAAGACAAATCAAATTGGTGT
TTTAGCTTCAAAAA
Found at i:600851 original size:476 final size:476
Alignment explanation
Indices: 599959--603101 Score: 4020
Period size: 476 Copynumber: 6.6 Consensus size: 476
599949 GCTTCAAAAA
* * * *
599959 AAAGGCTTTTTTCCCACCAATTTTTCTAAAGTCTAAGTTCATGCCTTAAAAT-AGACAAACATGA
1 AAAGGCTTTTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCATGCC-TCAAATGAGACAAACATGG
* * *
600023 ATTCTAGTAACGATCTTCACTCATTTGGTGATTTGGCACAATAAACACATTCTCCTCATTAGGAT
65 ATTCTAGTAATGATCTTCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
* *
600088 AAACGATG-TTGATGATTTTCTTTT-CTATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATC
130 AAATGA-GATTGATGATTTTCTTTTGC-ATGGAATTCTTTTCTTTGCCCTATTTTCCTTAAAATC
* * *
600151 AAAGTTCATCCTTTAAATAAGGCAAGCTTCGATTCCCATAACAATCTCCGTTCTGTTCAAGATTG
193 AAAGTTCATCCTTTAAATAAGGCAAGCTTCGATTCTCATAACAGTCTCCATTCTGTTCAAGATTG
* * * *
600216 GGAAGCCAAAACACATTCCCTTCATTTGGAGGCATGACATTGGAGCTTTGGTGTTACAGGAAATG
258 GGAAGCCAAAACACATTCCCTTCATTAGGATGCATGACATTGAAGCTTTGGTGTTGCAGGAAATG
* *
600281 CTTTTCTTTCCATCGTTTAAAATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATACT
323 CTTTTCTTTCCACCGTTTTAAATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATACT
* ** *
600346 CATACTAATCTCTGTTGATTTCAGGATTAGGCACCATAAACATAAG-CTTCTCATTAGGATACAT
388 CATACTAATCCCCATTCATTTCAGGATTAGGCACCATAAACAT-AGTCTTCTCATTAGGATACAT
**
600410 CATATTGATGCTTCAGTTTCGCAAG
452 CATATTGATGCTTTGGTTTCGCAAG
* * ** * *
600435 AAAGGCTTTTTTCCCTTCAATTTTTATAAAGTCTAAGTTTGTGCCTCAAAAGAGACAAATATGGA
1 AAAGGCTTTTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGA
* * * *
600500 TTCTAAG-ATTGATCATCATTCATTTGGTGATTTGGCACTATAAACATATTCTCCTCATTAAGAT
66 TTCT-AGTAATGATCTTCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * *
600564 AAAAGAGATTGATGACTTTCTTTTGCATGGAATTCTTCTCTTTGCCCTATTTTTCATAAAATCAA
130 AAATGAGATTGATGATTTTCTTTTGCATGGAATTCTTTTCTTTGCCCTATTTTCCTTAAAATCAA
* * * * *
600629 AGTTCATCCCTTAAATATGGCAAGCATCGATTCGCATAACAGTCTCCATTCCT-TTCAAGATTGA
195 AGTTCATCCTTTAAATAAGGCAAGCTTCGATTCTCATAACAGTCTCCATT-CTGTTCAAGATTGG
** * ** * *
600693 GAAGTGAAAACACATTCCCTTCATTCA-GATGCAAGACATTGAAGCTTTGGTGTCACAAGAAAAG
259 GAAGCCAAAACACATTCCCTTCATT-AGGATGCATGACATTGAAGCTTTGGTGTTGCAGGAAATG
* * * *
600757 CTTTTCTTTCCACCGTTTTCAAA-AGAATCATAGTTTGTCTCTTAAATAAGACAAATCA-AAATG
323 CTTTTCTTTCCACCGTTTT-AAATAGAATCAAAATTTGTCTCTTAAATAAGACAAA-CATGAATA
* *
600820 CTTATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAAGGATAC
386 CTCATACTAATCCCCATTCATTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT-AGGATAC
* *
600885 CTGATATTGATGCTTTGGTTTCGCAAG
450 ATCATATTGATGCTTTGGTTTCGCAAG
* *
600912 AAAGGCTTTTTT-CCTACCAGTTTTTGTAAAGTCTAAG-TCTGTGCCTCAAATGAGACAAACATG
1 AAAGGCTTTTTTCCCT-CCAATTTTTGTAAAGTCTAAGTTC-ATGCCTCAAATGAGACAAACATG
* * ** *
600975 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGATACTATAAACACATTCTCCTCATCAGGA
64 GATTCTAGTAATGATCTTCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGA
* * * * * *
601040 TAAATGACATTGATGATTTTCTTTTACGTGGAATTCTTTCCTTTACCCTGTTTTCCTTAAAATCA
129 TAAATGAGATTGATGATTTTCTTTTGCATGGAATTCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * * * **
601105 AAGTTCATTCTTTAAATAAAGCAAGCTTCGATTCTCATAATAGTATCTGTTCTGTTCAAGATTGG
194 AAGTTCATCCTTTAAATAAGGCAAGCTTCGATTCTCATAACAGTCTCCATTCTGTTCAAGATTGG
* * *
601170 GAAGCCAAAACACATTCCTTTCATTAGGATGCTTGACATTGAAGCTTTGGTGCTGCAGGAAATGC
259 GAAGCCAAAACACATTCCCTTCATTAGGATGCATGACATTGAAGCTTTGGTGTTGCAGGAAATGC
* * *
601235 TTTTCTTTCCACCGTTTTAAATAGAAACAAAATTTATCTCTTAAATAAGAAAAACATGAATACTC
324 TTTTCTTTCCACCGTTTTAAATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATACTC
* * *
601300 ATACTAATCCCCCTTCATTTCAAGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCA
389 ATACTAATCCCCATTCATTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCA
* **
601365 TAATGATGCTTTGGTTTCATAAG
454 TATTGATGCTTTGGTTTCGCAAG
* * * *
601388 AAAGGCTTTTTTCCCACTAATTTTTGTAAAGTCTAAGTTCATGCCTCAAAAGAGACAAACATGAA
1 AAAGGCTTTTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGA
* * * * * *
601453 TTCTAGTAACGATCTTCATTCATTTGGTGATTTGGCACAATAAACACTTTCTCATCTTTAAGATA
66 TTCTAGTAATGATCTTCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * *
601518 AACGATG-TTGATGATTTTCTTTTGTATGAAAATCTTTTATTTGCCCTATTTTCCTTAAAATCAA
131 AATGA-GATTGATGATTTTCTTTTGCATGGAATTCTTTTCTTTGCCCTATTTTCCTTAAAATCAA
* **
601582 AGTTCATCCTTTAAATAAGGCAAGCTTTGATTCTTGTAACAGTCTCCATTCTGTTCAAGATTGGG
195 AGTTCATCCTTTAAATAAGGCAAGCTTCGATTCTCATAACAGTCTCCATTCTGTTCAAGATTGGG
* * * *
601647 AAGCCAAAACACATTCCGTTTATTAGGATGCGTGACATTGAAGCTTTGGTGTTGTAGGAAATGCT
260 AAGCCAAAACACATTCCCTTCATTAGGATGCATGACATTGAAGCTTTGGTGTTGCAGGAAATGCT
** * *
601712 TTTCTTTTTACCATTTTAAATAGAATCAAAATTTGTCTCTTAAATAAGATAAACATGAATACTCA
325 TTTCTTTCCACCGTTTTAAATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATACTCA
* * **
601777 TACTAATCCCCATTCATTTAAGGATTAGACACCATAAACATAGTCTTCTTTTTAGGATACATCAT
390 TACTAATCCCCATTCATTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCAT
601842 ATTGATGCTTTGGTTTCGCAAG
455 ATTGATGCTTTGGTTTCGCAAG
* * * *
601864 AAAGGCGTTTTT-CCTACCATTTTTTGTAAAGTCTAAGTTTATGCCTCAAATGAGACAAGCATGG
1 AAAGGCTTTTTTCCCT-CCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGG
*
601928 ATTCTAGGAATGATCTTCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
65 ATTCTAGTAATGATCTTCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
* * ** ** *
601993 AAAAGATATTGATGATTTTCTTTAACATAAAATTCTGTTCTTTGCCCTATTTTCCTTAAAATCAA
130 AAATGAGATTGATGATTTTCTTTTGCATGGAATTCTTTTCTTTGCCCTATTTTCCTTAAAATCAA
* * * * * * *
602058 AGTTCATCCCTTAAATATGGCAAGCATAGATTCTCATAATAGTCTCCATTCTATTCAAGATTGAG
195 AGTTCATCCTTTAAATAAGGCAAGCTTCGATTCTCATAACAGTCTCCATTCTGTTCAAGATTGGG
** * *
602123 AAGTGAAAACACATTCCCTTCATTAGGGTGCATGATATTGAAGCTTTGGTGTTGCAGGAAATGCT
260 AAGCCAAAACACATTCCCTTCATTAGGATGCATGACATTGAAGCTTTGGTGTTGCAGGAAATGCT
* * * *
602188 TTTCTTTCCACTGTTTTAAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAATACGAATACTCA
325 TTTCTTTCCACCGTTTTAAATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATACTCA
* *
602253 TACTAATCCCCATTCATTTCAGGATTAGGCACCATAAATACT-GTCTTCTCATTAGGACACATCA
390 TACTAATCCCCATTCATTTCAGGATTAGGCACCATAAACA-TAGTCTTCTCATTAGGATACATCA
*
602317 TATTGATGCTTTGGTTTAGCAAG
454 TATTGATGCTTTGGTTTCGCAAG
* * * * * * **
602340 ATAGCCTTTGTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGACAAACATTAA
1 AAAGGCTTTTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGA
* * *
602405 TTCTGGGT-ATGATCATCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCAGTAGGAT
66 TTCT-AGTAATGATCTTCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
* *
602469 AAATG-GCATTGATGATTTTCTTTTGCATGGAATTCTTTTCTTTACCATATTTTCCTTAAAATCA
130 AAATGAG-ATTGATGATTTTCTTTTGCATGGAATTCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* *
602533 AAGTTCATCCTTTAAATAAGGCAAGCTTCGATTCTAATAACAGTCTCCGTTCTGTTCAAGATTGG
194 AAGTTCATCCTTTAAATAAGGCAAGCTTCGATTCTCATAACAGTCTCCATTCTGTTCAAGATTGG
* * * *
602598 GATGCCAAAACACATTCCCTTCATTAGGATGCATGACATTTAAACTTTGGTGTTGCAAGAAATGC
259 GAAGCCAAAACACATTCCCTTCATTAGGATGCATGACATTGAAGCTTTGGTGTTGCAGGAAATGC
602663 TTTTCTTTCCACCGTTTTAAATAGAATCAAAATTTGTCTCTTAAAT-------A-A-G---A---
324 TTTTCTTTCCACCGTTTTAAATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATACTC
* * * *
602713 A-A--AATCCCCATTCTTTTCAAGATTA-GCTACCATAAACGTAGTTTTCTCATTAGGATACATC
389 ATACTAATCCCCATTCATTTCAGGATTAGGC-ACCATAAACATAGTCTTCTCATTAGGATACATC
** *
602774 ATATTGATGCTTTGGCATCGCAAC
453 ATATTGATGCTTTGGTTTCGCAAG
* ** *
602798 AAAGGCTTTTTT-CCACCAGCTTTTGTAAAGTCTAAGTTCATGACTCAAATGAGACAAACATGGA
1 AAAGGCTTTTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGA
* * * * * *
602862 TTCTAGTAACGATCTTCATTCTTTTGGTCATTAGGCACTATAAACACATTCTTCTTATTAGGATA
66 TTCTAGTAATGATCTTCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * *
602927 AATGATATTGATGATTTTCTATTCCATGGAAATCTTTTCTTTGCCCTATTTTGCTTAAAATCAAA
131 AATGAGATTGATGATTTTCTTTTGCATGGAATTCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * * * *
602992 GTTCATCCTTTAAATATGG-AAGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTGGGA
196 GTTCATCCTTTAAATAAGGCAAGCTTCGATTCTCATAACAGTCTCCATTCTGTTCAAGATTGGGA
* *** * * * *
603056 AGCGAAAATGTATTCCCTTCATTAGGATACACGACATCGATGCTTT
261 AGCCAAAACACATTCCCTTCATTAGGATGCATGACATTGAAGCTTT
603102 TTGTCGTAAG
Statistics
Matches: 2307, Mismatches: 330, Indels: 80
0.85 0.12 0.03
Matches are distributed among these distances:
456 75 0.03
457 177 0.08
458 77 0.03
460 1 0.00
461 1 0.00
464 1 0.00
467 1 0.00
468 1 0.00
469 1 0.00
475 9 0.00
476 1553 0.67
477 410 0.18
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (476 bp):
AAAGGCTTTTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGA
TTCTAGTAATGATCTTCATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATA
AATGAGATTGATGATTTTCTTTTGCATGGAATTCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
GTTCATCCTTTAAATAAGGCAAGCTTCGATTCTCATAACAGTCTCCATTCTGTTCAAGATTGGGA
AGCCAAAACACATTCCCTTCATTAGGATGCATGACATTGAAGCTTTGGTGTTGCAGGAAATGCTT
TTCTTTCCACCGTTTTAAATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATACTCAT
ACTAATCCCCATTCATTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATA
TTGATGCTTTGGTTTCGCAAG
Found at i:603276 original size:205 final size:206
Alignment explanation
Indices: 602912--603325 Score: 785
Period size: 205 Copynumber: 2.0 Consensus size: 206
602902 TAAACACATT
602912 CTTCTTATTAGGATAAATGATATTGATGATTTTCTATTCCATGGAAATCTTTTCTTTGCCCTATT
1 CTTCTTATTAGGATAAATGATATTGATGATTTTCTATTCCATGGAAATCTTTTCTTTGCCCTATT
602977 TTGCTTAAAATCAAAGTTCATCCTTTAAATATGGAAGCATCGATTCTCGTAATAGTCTCCATTCT
66 TTGCTTAAAATCAAAGTTCATCCTTTAAATATGGAAGCATCGATTCTCGTAATAGTCTCCATTCT
* * *
603042 TTTTAAGATTGGGAAGCGAAAATGTATTCCCTTCATTAGGATACACGACATCGATGCTTT-TTGT
131 TTTTAAGATTGGGAACCGAAAACGTATTCCCTTCATTAGGATACACGACATCGATGCTTTGGTGT
*
603106 CGTAAGAAAAG
196 CGTAAAAAAAG
603117 CTTCTTATTAGGATAAATGATATTGATGATTTTCTATTCCATGGAAATCTTTTCTTTGCCCTATT
1 CTTCTTATTAGGATAAATGATATTGATGATTTTCTATTCCATGGAAATCTTTTCTTTGCCCTATT
603182 TTGCTTAAAATCAAAGTTCATCCTTTAAATATGGAAGCATCGATTCTCGTAATAGTCTCCATTCT
66 TTGCTTAAAATCAAAGTTCATCCTTTAAATATGGAAGCATCGATTCTCGTAATAGTCTCCATTCT
603247 TTTTAAGATTGGGAACCGAAAACGTATTCCCTTCATTAGGATACACGACATCGATGCTTTGGTGT
131 TTTTAAGATTGGGAACCGAAAACGTATTCCCTTCATTAGGATACACGACATCGATGCTTTGGTGT
603312 CGTAAAAAAAG
196 CGTAAAAAAAG
603323 CTT
1 CTT
603326 TTCTTTCTAT
Statistics
Matches: 204, Mismatches: 4, Indels: 1
0.98 0.02 0.00
Matches are distributed among these distances:
205 188 0.92
206 16 0.08
ACGTcount: A:0.29, C:0.17, G:0.15, T:0.38
Consensus pattern (206 bp):
CTTCTTATTAGGATAAATGATATTGATGATTTTCTATTCCATGGAAATCTTTTCTTTGCCCTATT
TTGCTTAAAATCAAAGTTCATCCTTTAAATATGGAAGCATCGATTCTCGTAATAGTCTCCATTCT
TTTTAAGATTGGGAACCGAAAACGTATTCCCTTCATTAGGATACACGACATCGATGCTTTGGTGT
CGTAAAAAAAG
Found at i:604089 original size:468 final size:464
Alignment explanation
Indices: 603174--604339 Score: 1411
Period size: 468 Copynumber: 2.5 Consensus size: 464
603164 TCTTTTCTTT
* *
603174 GCCCTATTTTGCTTAAAATCAAAGTTCATCCTTTAAATATGGAAGCATCGATTCTCGTAATAGTC
1 GCCCTATTTTCCTTAAAATCAAAGTTCATCCTTCAAATATGGAAGCATCGATTCTCGTAATAGTC
*
603239 TCCATTCTTTTTAAGATTGGGAACCGAAAACGTATTCCCTTCATTAGGATACACGACATCGATGC
66 TCCATTCTTTTTAAGATTGGGAACCGAAAACATATTCCCTTCATTAGGATACACGACATCGATGC
* * * * * *
603304 TTTGGTGTCGTAAAAAAAGCTTTTCTTTCTATCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAA
131 TTTAGTGTAGTAAAAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTGCCTCTTAAA
* * * * *
603369 TACGAAAAACTTGAATACTCATACTCATGCCTATTCTTTTCAGGATTAGGCAGCTTAAACATAGT
196 TACGAAAAACTTGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACAAAGT
* * *
603434 CTTCTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTTCACACCAGT
261 CTTCTCATTAGGATACAACATATAGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCACACCAAT
* * * * *
603499 TTTTGTAAAGTCTAAGTTCGTGACTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC
326 TTTTGTAAAGCCTAAGTTCATGACTCAAATGAGAAAAACATGGATTCTAGTAAAGATCTTCATTC
* * * * * *
603564 TTTTGGTCATTAGGCACTATAAACACATTCTCCTCTTCAGGATAAATGATATTGATGATTTTCTT
391 TTTTGATCATTAGGCACCACAAACAAATTCTCCTCTTCAAGATAAATGATATTGATGATTTTATT
*
603629 TTGCATGGA
456 CTGCATGGA
603638 GCCCTATTTTCCTTAAAATCAAAGTTCAT-CTTCCAAATATGGCAAGCATCGATTCTCGTAATAG
1 GCCCTATTTTCCTTAAAATCAAAGTTCATCCTT-CAAATATGG-AAGCATCGATTCTCGTAATAG
** * * *
603702 TCTCCATTCTTTTTAAGATTGGGAAGTGAAAACATATTCCCTTCATTAGGAGGATACATGGCATT
64 TCTCCATTCTTTTTAAGATTGGGAACCGAAAACATATTCCCTTCATT---AGGATACACGACATC
*
603767 GATGCTTTAGTGTAGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTGCCTC
126 GATGCTTTAGTGTAGTAAAAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTGCCTC
* *
603832 TTAAATATGAAAAACTTGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCAGCATAAAC
191 TTAAATACGAAAAACTTGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAAC
*
603897 AAAGTCTTCTCATTAGGATACATCATATAGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCAC
256 AAAGTCTTCTCATTAGGATACAACATATAGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTTTCAC
* *
603962 ACCAATTTTTGTAAAGCCTAAGTTCATGCCTCAAATTAGAAAAACATGGATTCTAGTAAAGATCT
320 ACCAATTTTTGTAAAGCCTAAGTTCATGACTCAAATGAGAAAAACATGGATTCTAGTAAAGATCT
* **
604027 TCATTCATTTT-ATGATTAGGTTCCACAAA-AAATTCTCCTCTTCAAGATAAATGATATTGATGA
385 TCATTC-TTTTGATCATTAGGCACCACAAACAAATTCTCCTCTTCAAGATAAATGATATTGATGA
604090 TTTTATTCTGCATGGA
449 TTTTATTCTGCATGGA
** * * * * * * * * * *
604106 --AATCTTTTCTTTAACCTATTTTCAAAGCTCATCCTTGAAATAAGACAAGCTTTGATTCTCATA
1 GCCCTATTTTCCTTAA---A--ATCAAAGTTCATCCTTCAAATATG-GAAGCATCGATTCTCGTA
* * * *
604169 ATAGTCTCCATTCTTTTTAGGATT-GG----G------TA----CTTCATTAGGATGCAGGAAAT
60 ATAGTCTCCATTCTTTTTAAGATTGGGAACCGAAAACATATTCCCTTCATTAGGATACACGACAT
* * * * * * * *
604219 TGATGCTTTATTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTAATAGAATCAAAGTTTGTCT
125 CGATGCTTTAGTGTAGTAAAAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTGCCT
* * * * *
604284 TTTAAATACGACAAACATAAATACTCATACTAATCCTCATTCATTTT-AGGATTAGG
190 CTTAAATACGAAAAACTTGAATACTCATACTAATCCCCATTC-TTTTCAGGATTAGG
604340 TACCTGTCGT
Statistics
Matches: 614, Mismatches: 73, Indels: 41
0.84 0.10 0.06
Matches are distributed among these distances:
453 113 0.18
454 4 0.01
456 7 0.01
460 2 0.00
463 3 0.00
464 36 0.06
465 65 0.11
466 11 0.02
468 225 0.37
469 86 0.14
470 6 0.01
471 53 0.09
472 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (464 bp):
GCCCTATTTTCCTTAAAATCAAAGTTCATCCTTCAAATATGGAAGCATCGATTCTCGTAATAGTC
TCCATTCTTTTTAAGATTGGGAACCGAAAACATATTCCCTTCATTAGGATACACGACATCGATGC
TTTAGTGTAGTAAAAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTGCCTCTTAAA
TACGAAAAACTTGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACAAAGT
CTTCTCATTAGGATACAACATATAGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCACACCAAT
TTTTGTAAAGCCTAAGTTCATGACTCAAATGAGAAAAACATGGATTCTAGTAAAGATCTTCATTC
TTTTGATCATTAGGCACCACAAACAAATTCTCCTCTTCAAGATAAATGATATTGATGATTTTATT
CTGCATGGA
Found at i:607448 original size:52 final size:52
Alignment explanation
Indices: 607370--607498 Score: 240
Period size: 52 Copynumber: 2.5 Consensus size: 52
607360 CGAAATATGA
607370 AAATTTGCCTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGC
* *
607422 AAATTTGCTTGCATGTATCGATACATTTTATAGTGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGC
607474 AAATTTGCCTGCATGTATCGATACA
1 AAATTTGCCTGCATGTATCGATACA
607499 AAGATTAGTG
Statistics
Matches: 74, Mismatches: 3, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
52 74 1.00
ACGTcount: A:0.29, C:0.17, G:0.19, T:0.36
Consensus pattern (52 bp):
AAATTTGCCTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGC
Found at i:607508 original size:52 final size:52
Alignment explanation
Indices: 607370--607514 Score: 220
Period size: 52 Copynumber: 2.8 Consensus size: 52
607360 CGAAATATGA
* *
607370 AAATTTGCCTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACAATTATTAGTGTATCGATACATCTGGGC
* *
607422 AAATTTGCTTGCATGTATCGATAC-ATTTTATAGTGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACAATTAT-TAGTGTATCGATACATCTGGGC
**
607474 AAATTTGCCTGCATGTATCGATACAAAGATTAGTGTATCGA
1 AAATTTGCCTGCATGTATCGATACAATTATTAGTGTATCGA
607515 AACAATGTAT
Statistics
Matches: 83, Mismatches: 8, Indels: 4
0.87 0.08 0.04
Matches are distributed among these distances:
51 2 0.02
52 79 0.95
53 2 0.02
ACGTcount: A:0.30, C:0.16, G:0.19, T:0.35
Consensus pattern (52 bp):
AAATTTGCCTGCATGTATCGATACAATTATTAGTGTATCGATACATCTGGGC
Found at i:607611 original size:32 final size:33
Alignment explanation
Indices: 607570--607638 Score: 122
Period size: 32 Copynumber: 2.1 Consensus size: 33
607560 GGCAGTAGCT
607570 TACATTGTATCGATACAA-AATTTATGTATCGA
1 TACATTGTATCGATACAACAATTTATGTATCGA
*
607602 TACATTGTATCGATACAACACTTTATGTATCGA
1 TACATTGTATCGATACAACAATTTATGTATCGA
607635 TACA
1 TACA
607639 AATCATTGAA
Statistics
Matches: 35, Mismatches: 1, Indels: 1
0.95 0.03 0.03
Matches are distributed among these distances:
32 18 0.51
33 17 0.49
ACGTcount: A:0.36, C:0.16, G:0.12, T:0.36
Consensus pattern (33 bp):
TACATTGTATCGATACAACAATTTATGTATCGA
Found at i:607612 original size:13 final size:13
Alignment explanation
Indices: 607594--607618 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
607584 ACAAAATTTA
607594 TGTATCGATACAT
1 TGTATCGATACAT
607607 TGTATCGATACA
1 TGTATCGATACA
607619 ACACTTTATG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:608846 original size:478 final size:477
Alignment explanation
Indices: 607945--610632 Score: 3324
Period size: 478 Copynumber: 5.6 Consensus size: 477
607935 TGTCTACAGT
* * *
607945 ACCATAAACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCACAAGAAAGGCTT
1 ACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* ** * * * *
608010 TTTATTCATGCAAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAA
66 TTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAG
* * * * *
608075 TAATGATCTTCATTCATTTGGGGATTTGGCATTATAAACACATTCTCCTCATTAGGATAAATGAT
131 TAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTC-TTAGGATAAATGAT
*
608140 ATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCATCCTATTTTCCTTAAAATCAAAGTTCAT
195 ATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCACCCTATTTTCCTTAAAATCAAAGTTCAT
* * * * * *
608205 CTTTTAAATATGGCAAGG-ATCGATTCTCGTATTAGTCTCCATTATTTTTAAGATTGGGACGTGA
260 CCTTTAAATATGGC-AGGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTTGGAAGCGA
* * *
608269 AAACACATTCCATTCATTAGCATACATGACATTGATGTTTTGGTGTCGTAAGAAAAGCTTTTCTT
324 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTT
* * * *
608334 TCCAACGTTTTTCATAGAACCAAAATTTGTCTCTTAAATAAGATAAACATGAATACTCAGACTAA
389 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTCAGACTAA
*
608399 TCCCCGTT-TATTTCAGGATGAGGC
454 TCCCCGTTCT-TTTCAGGATTAGGC
* * * * *
608423 ACTACAAACATAGCCTTCTCATTAGGATACATTATATTGATGCTTTGGTTTCGCAAGAAATGCTT
1 ACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* * * *
608488 TTTTTTCACACCAATATTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTTG
66 TTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAG
* * *
608553 TAAAGATCTTCATTCATTTTGTGATTAGGTACAATAAACACATTCTCCTCTTCCA-GATAAAGGA
131 TAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCTT--AGGATAAATGA
* ** *
608617 TATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCA
194 TATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCACCCTATTTTCCTTAAAATCAAAGTTCA
* * * * * * *
608682 TCCTTTAAATAAGGCAGGCTTTGATGCTCATAATAGTCACCATTCTTTATAAGATTTGGAAGCGA
259 TCCTTTAAATATGGCAGGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTTGGAAGCGA
* * *
608747 AAACACATTCCCTTCATTAGGATACATAAAATTGATGCTTTGGTGTCGTAAGAAAAGCTTCTCTT
324 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTT
* * ** * * * *
608812 TCCATCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATGGGACAAATAGGAATACTCACACTAA
389 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTCAGACTAA
* *
608877 TCCCTGTTCTTTTCAAGATTAGGC
454 TCCCCGTTCTTTTCAGGATTAGGC
* * * *
608901 ACCATAAACACAGTCTTCTCATTGGGATACATCACATTGATGCTTTGGTTTCCCAAGAAAGGCTT
1 ACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-T
*
608966 TTTTTTTCACACCAATTTTTGTAAAGTCAAAGTTCGTGACTCAAATGAGACAAACATGGATTCTA
65 TTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTA
* * * * *
609031 GTAATTG-TCTTCATTC-TTTTGGTCAATAGGAACTATAAACACATTCTCCTCAATAGGATAAAT
130 GTAA-AGATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTC-TTAGGATAAAT
* * * * * *
609094 GTTATTGATGATTTTCTATTGCATGAAAATCTTTTCTTTACCCTATTTTCCTGAAACTCAAAGTT
192 GATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCACCCTATTTTCCTTAAAATCAAAGTT
* *
609159 CATCCTTTAAATATGGCAAGCGTCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTTAGGAAG
257 CATCCTTTAAATATGGCAGGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTT-GGAAG
* * * * * *
609224 CGAAAGCATATTCCCTTCATTAGGATACAAGACAATGATGCTTTGGTGTCGTCAGAAAAGTTTTT
321 CGAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTT
* * * * ** * *
609289 CTTTCCGCCATTTTTGATAGAATTAAAGTTTATCTCTTAAATGCGACAAACATGAATACTCATAC
386 CTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTCAGAC
* * *
609354 TAATCCTCGTTCTTTTCAAGATTTGGC
451 TAATCCCCGTTCTTTTCAGGATTAGGC
* *
609381 ACCATAAACATAGTCTTCTCATTAGGATATATCATATTGATGCTTTGGTTTTGCAAGAAAGGC--
1 ACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* *
609444 TTTTTTCACACCAATATTTT-TAAAGTCTAAGTTCGTGCCTCAAATGAGGCAAACATGGATTCTA
66 TTTTTTCACACCAAT-TTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTA
* * *
609508 GTAATGATCTTCATTC-TTTCGGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATG
130 GTAAAGATCTTCATTCATTT-TGTGATTAGGCACTATAAACACATTCTCC-TCTTAGGATAAATG
* *
609572 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCGCCCTATTTTCTTTAAAATCAAAGTTC
193 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCACCCTATTTTCCTTAAAATCAAAGTTC
** * * * *
609637 ATATTTTAAATATGGTAGGCATCGATTCTCGTAATAGTCCCCATTCTTTTTAAGATTGGGCAGCG
258 ATCCTTTAAATATGGCAGGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTTGGAAGCG
* * * * *
609702 AAAACATATTCCCTCCATCAGGATACATGACATTGATGCTTTGGTGTAGTCAGAAAAGCTTTTCT
323 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCT
* * * * *
609767 TTCCACCATTTTTGATAGAATCAAAGTTTGTCTTTTAAATACGATAGACATGAATACTCATACTA
388 TTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTCAGACTA
609832 ATCCCCGTTCTTTTCAGGATTAGGC
453 ATCCCCGTTCTTTTCAGGATTAGGC
* * * * * * *
609857 AGCATAAACATAGTCTTCACATTAGGAGACATCATATTGATGTTTTGGTTTCCCATGAAAGCCTT
1 ACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* * *
609922 TTTTTTAACACCAATTTTTGTAAAGTCTAAGTTCATGACTCAAATGAGATAAAACATGGATTCTA
66 TTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGA-CAAACATGGATTCTA
* * * *
609987 GTAAAGATCTTCATTCATTTTGTTATTAGGTAATATAAACACATTCTCCTCTTCAGGACAAATGA
130 GTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCTT-AGGATAAATGA
* * * * * * * * *
610052 TATTAATGATTTTATTTTGCGTGGAATTCTTATCTTTACCCTATTTCCCTTAAAGTCAAAGCTCA
194 TATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCACCCTATTTTCCTTAAAATCAAAGTTCA
* * * * * * *
610117 TCC-TTAAATAAGGCAAGCGTCAATTCTCGTGATAGTCTCCATTCTTTTCAAGA-TTGAGAAGTG
259 TCCTTTAAATATGGCAGGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTTG-GAAGCG
* * * * *
610180 AAAACACATTCCCTTCATTAGGATGCATGACATGGAAGCTTTGGTGTCGCAGGAAAAGCTTTTCT
323 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCT
* * * *
610245 TTCCATCGTTTTTAATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACAAGAACACTCATG-CT
388 TTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTCA-GACT
****
610309 AATCCCTAACCTTTTCAGGATTAGGC
452 AATCCCCGTTCTTTTCAGGATTAGGC
* * *
610335 ACCATAAAACATAGTCATT-TCATTAGGAGACA-CAATATTAATGCTTTGGTTTCGTAAGAAAGG
1 ACCAT-AAACATAGTC-TTCTCATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGG
* * * * *
610398 C--CTTTTTCCCACTAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATAAGACCAACATGGATTC
63 CTTTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATGGATTC
* * * *
610461 TAG-AAATGATCTTCATT-TTTTTGGTGATTAGGCACTATAAACATATTCTCTTTATTAGGATAA
128 TAGTAAA-GATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTCTC-CTCTTAGGATAA
* * * * *
610524 ATGGTATTGATGATTTTCTTTGGAATGTAAAATCTTTTCTTCGCCCTATTTTCCTTAAAATCAAA
190 ATGATATTGATGATTTTCTTTTGCATG-GAAATCTTTTCTTCACCCTATTTTCCTTAAAATCAAA
* * * *
610589 GTTTATCTTTTAAATATGGCAAGCATCGATTCTAGTAATAGTCT
254 GTTCATCCTTTAAATATGGCAGGCATCGATTCTCGTAATAGTCT
610633 TCATACATGA
Statistics
Matches: 1902, Mismatches: 278, Indels: 60
0.85 0.12 0.03
Matches are distributed among these distances:
475 7 0.00
476 274 0.14
477 308 0.16
478 727 0.38
479 382 0.20
480 204 0.11
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (477 bp):
ACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
TTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAG
TAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCTTAGGATAAATGATA
TTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCACCCTATTTTCCTTAAAATCAAAGTTCATC
CTTTAAATATGGCAGGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTTGGAAGCGAAA
ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTC
CACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTCAGACTAATC
CCCGTTCTTTTCAGGATTAGGC
Found at i:609867 original size:159 final size:160
Alignment explanation
Indices: 608708--609957 Score: 430
Period size: 159 Copynumber: 7.8 Consensus size: 160
608698 GGCTTTGATG
* * * * * *
608708 CTCATAATAGTCACCATTCTTTAT-AAGATTTGGAAGCGA-AAACACATTCCCTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTT-TCAAGATTAGGCAGCGATAAACATATTCCCTCCATTAGGATA
* * * * * * **
608771 CATAAAATTGATGCTTTGGTGTCGTAAGAAAAGCTTCTCTTTC-CATCGTTTTTTATAGAATCAA
65 CATGACATTGATGCTTTGGTGTTG-CAGAAAAGCTTTTCTTTCACACCAATTTTTATAGAATCAA
** ** * * * *
608835 AGTTTGTCTCTTAAATGGGACAAATAGGAATA
129 AGTTCATCTCTTAAATACGATAGACATGAATA
* * ** * * * * *
608867 CTCACACTAATCCCTGTTCTTTTCAAGATTAGGCA-CCATAAACACAGT-CTTCTCATTGGGATA
1 CTCATAATAATCCCCATTCTTTTCAAGATTAGGCAGCGATAAACATATTCCCTC-CATTAGGATA
* * * * *
608930 CATCACATTGATGCTTTGGT-TTCCCAAGAAAGGCTTTTTTTTTCACACCAATTTTTGTA-AAGT
65 CATGACATTGATGCTTTGGTGTT-GC-AGAAAAGC-TTTTCTTTCACACCAATTTTTATAGAA-T
* ** * * * * *
608993 CAAAGTTCGTGACTCAAATGA-GACAAACATGGATT
126 CAAAGTTCATCTCTTAAAT-ACGATAGACATGAATA
** ** **** * * * * *
609028 CT-AGTAATTGTCTTCATTCTTTTGGTCAATAGG-AACTATAAACACATTCTCCT-CAATAGGAT
1 CTCA-TAATAATCCCCATTCTTTTCAAGATTAGGCAGCGATAAACATATTC-CCTCCATTAGGAT
* ** * ** * * * **
609090 AAATGTTATTGATGATTTTCTATTGCATGAAAATCTTTTCTTT-AC-CCTATTTTCCT-GAAACT
64 ACATGACATTGATGCTTTGGTGTTGCA-GAAAAGCTTTTCTTTCACACCAATTTTTATAG-AA-T
* * *
609152 CAAAGTTCATC-CTTTAAATATGGCA-AG-CGTCG-ATT
126 CAAAGTTCATCTC-TTAAATA-CG-ATAGACAT-GAATA
* * * * * * *
609187 CTCGTAATAGTCTCCATTCTTTTTAAGATTTAGGAAGCGA-AAGCATATTCCCTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTCAAGA-TTAGGCAGCGATAAACATATTCCCTCCATTAGGATA
* * * * * *
609251 CAAGACAATGATGCTTTGGTGTCGTCAGAAAAGTTTTTCTTTC-CGCC-ATTTTTGATAGAATTA
65 CATGACATTGATGCTTTGGTGTTG-CAGAAAAGCTTTTCTTTCACACCAATTTTT-ATAGAATCA
* * * *
609314 AAGTTTATCTCTTAAATGCGACAAACATGAATA
128 AAGTTCATCTCTTAAATACGATAGACATGAATA
* * * * * * *
609347 CTCATACTAATCCTCGTTCTTTTCAAGATTTGGCA-CCATAAACATAGT-CTTCTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTCAAGATTAGGCAGCGATAAACATATTCCCTC-CATTAGGATA
* * * * *
609410 TATCATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-TTTCACACCAATATTTT-TA-AAGTC
65 CATGACATTGATGCTTTGGTGTTGC-AGAAAAGCTTTTCTTTCACACCAAT-TTTTATAGAA-TC
* * * * * *
609471 TAAGTTCGTGC-CTCAAATGAGGCA-A-ACATGGATT
127 AAAGTTCAT-CTCTTAAAT-ACG-ATAGACATGAATA
* ** ** * * *
609505 CT-AGTAATGATCTTCATTC-TTTCGGTGATTAGGCA-CTATAAACACATTCTCCT-TATTAGGA
1 CTCA-TAATAATCCCCATTCTTTTC-AAGATTAGGCAGCGATAAACATATTC-CCTCCATTAGGA
* * * ** * * * * * * *
609566 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTCGC-CCTATTTTCTTTAAAAT
63 TACATGACATTGATGCTTTGGTGTTGCA-GAAAAGCTTTTCTTTCACACCAATTTT-TATAGAAT
* * * * * *
609629 CAAAGTTCATATTTTAAATATGGTAGGCATCG-ATT
126 CAAAGTTCATCTCTTAAATACGATAGACAT-GAATA
* * * * *
609664 CTCGTAATAGTCCCCATTCTTTTTAAGATTGGGCAGCGA-AAACATATTCCCTCCATCAGGATAC
1 CTCATAATAATCCCCATTCTTTTCAAGATTAGGCAGCGATAAACATATTCCCTCCATTAGGATAC
*
609728 ATGACATTGATGCTTTGGTGTAGTCAGAAAAGCTTTTCTTTC-CACC-ATTTTTGATAGAATCAA
66 ATGACATTGATGCTTTGGTGTTG-CAGAAAAGCTTTTCTTTCACACCAATTTTT-ATAGAATCAA
** *
609791 AGTTTGTCTTTTAAATACGATAGACATGAATA
129 AGTTCATCTCTTAAATACGATAGACATGAATA
* * * * * *
609823 CTCATACTAATCCCCGTTCTTTTCAGGATTAGGCAGC-ATAAACATAGT-CTTCACATTAGGAGA
1 CTCATAATAATCCCCATTCTTTTCAAGATTAGGCAGCGATAAACATATTCCCTC-CATTAGGATA
* * * * * * *
609886 CATCATATTGATGTTTTGGT-TTCCCATG-AAAGCCTTTTTTTTAACACCAATTTTTGTA-AAGT
65 CATGACATTGATGCTTTGGTGTT-GCA-GAAAAG-CTTTTCTTTCACACCAATTTTTATAGAA-T
*
609948 CTAAGTTCAT
126 CAAAGTTCAT
609958 GACTCAAATG
Statistics
Matches: 793, Mismatches: 222, Indels: 151
0.68 0.19 0.13
Matches are distributed among these distances:
157 15 0.02
158 138 0.17
159 372 0.47
160 153 0.19
161 110 0.14
162 3 0.00
163 2 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (160 bp):
CTCATAATAATCCCCATTCTTTTCAAGATTAGGCAGCGATAAACATATTCCCTCCATTAGGATAC
ATGACATTGATGCTTTGGTGTTGCAGAAAAGCTTTTCTTTCACACCAATTTTTATAGAATCAAAG
TTCATCTCTTAAATACGATAGACATGAATA
Found at i:612915 original size:476 final size:475
Alignment explanation
Indices: 611302--623736 Score: 14759
Period size: 476 Copynumber: 26.2 Consensus size: 475
611292 GTTTCCCAAA
* * * * *
611302 AAAGTCTAAGTTCATGACTCAAGTGAGATAAACATGGATTCTAGTAAAGATCTTCATTCATTTTG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * * * *
611367 TGATTAGGTACTATGAACGCATTCTCCTCT-TCAGGATAAATGATATTAATGATTTTATTTCGCA
65 TGATTAGGCACTATAAACACATTCTCCT-TATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* * * * *
611431 TGAAAATCTTTTTTTTACCCTATTTTCCTTAAAAACAAAGTTCATCCGTTAAATAAGGCAAGCAT
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * * ** *
611496 CGATTCTCGTAACTA-TCTCCATTCTTTTCAAGATTGAGAAGTG-AAACACATTCTTTTAATTAG
194 CGATTCTCATAA-TAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAG
* * * * * ** * *
611559 GATGCATGACATTAAAGCTTTGGTGTCGCAGGAAAAGCTTTTCTTTTTACTATTTTTAATAGAAT
258 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
* * * * * * *
611624 TAAAGTTTGTCTCTTAAATAAGACAAATAAGAATACTCATACTAATCACTGTTATTTTCAGGATT
323 CAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATT
* * ** * * * *
611689 AGGTACCATAAACATAGTCTTCTCATTAGGATACAAGACATCGATACTTTGGTTTCGGAAGAAAG
388 AGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAG
* *
611754 GCTTTCTTCCCCCCAATTTTTGT
453 GCTTTTTTCCCACCAATTTTTGT
* * * * *
611777 AAAGTCTAAGTTCGTGTCTCAAATGAGACAAACATGGAATCTAGTAATAATCTTCATTAATTTGG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATT-CTTTTG
* * * * *
611842 TGATTTGGCACTACAAACACATTCT-TTTCATCAGGATAAATGATATTAATGATTTTCTTTTGCA
65 TGATTAGGCACTATAAACACATTCTCCTT-ATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* * * *
611906 TGGAAATCTTTTCTTTGACCTATTTTCCTTAAAAACAAAGTTCGTCCTTTTAATAAGGCAAGCAT
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * * *
611971 CGATTCTCTTAATAGTCTCCATTCTTTTTATGTTTGGAAAGCAAAAACACATTCCCTTCATTAGG
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGG
* * * ** ** **
612036 ATACATGACATTGATGCTTTGGTGTCATAAGAAAAACTGTTCTTTATATCGTTTTCTTTTTAGAA
259 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCA-CCATTT-TTGATAGAA
* * *
612101 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCTCCGATCTTTTCAGGAT
322 TCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGAT
* * * *
612166 TAGGCAGCATAAACATAGTCTTCTCATTAAGATACATCATATTGATGCTTTGGTTTCACAAGAAA
387 TAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAA
* ** ***
612231 GGTTTTTTTTTGCATGGATTTTTGT
452 GG-CTTTTTTCCCACCAATTTTTGT
* * * * * *
612256 AAAGTCTAAGTTTGTGCCTCAAATGAGGCAAACAAGGATTCTAGTAATGTTCTACATACTTTTTG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * *
612321 TCATTAGGCACTATAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCTT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * *
612386 GTAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAATTTCATCCTTTAAATAAGGCAAGCTTC
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* * * *
612451 GATTCTCATAGTAGTCTCTATTCTTTTTAAGATTGGGAAACGAAAACAAATTCCCTTCATTAGGA
195 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGA
* * * * * *
612516 TACCTAAAATTGCTGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCA
260 TACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCA
* *
612581 AAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTATTCCCCGTTCTTTTCAGGATTAG
325 AAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAG
** * *
612646 GCACCATAAATGTAGTCTTCTCATTAGGATA-ACTCATATTGATGCTTCGGTTTCGCAAGAAAGG
390 GCACCATAAACATAGTCTTCTTATTAGGATACA-TCATATTGATGCTTTGGTTTCGCAAGAAAGG
*
612710 TTTTTTTCCCACCAATTTTTGT
454 CTTTTTTCCCACCAATTTTTGT
* * * * *
612732 AATGTCGAAGTTCGTGACTTAAATGAGAAAAACATGGATTCTAGTAATGATCTTCATTCTTTTGG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTT-G
* *
612797 TGATTAGGCACTATAAACATATTCTCCTTATTAGGATAAATGATGTTGATGATTTTCTTTTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * * * * *
612862 GGAAATCTTTTCTTCGCCCTATTTTACTTAATATCAATGTTCATCTTTTAAATATGGCAAGCATC
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* * * *
612927 GATTCACGTAATAGTATCCATTCTTTTTAAGATTGGAAAGCGAAAACACATTCCCTTCATTAGGA
195 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGA
*
612992 TACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCA
260 TACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCA
* * * *
613057 AAGTTTGACTTTTAAATACGACAAACATGAATACTCATACTAATCCTCGTTCTTTTTAGGATTAG
325 AAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAG
* * * *
613122 GTACCGTAAACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTCGTTTCGCAAGAAAGGC
390 GCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC
*
613187 TTTTTAT-TCACGCAAATTTTTGT
455 TTTTT-TCCCAC-C-AATTTTTGT
* * *
613210 AAAGTCTAAGTTTGTGCC-CTAAATGAGACAAACATGGATTCTAGTAATGATCTTCTTTCATTTG
1 AAAGTCTAAGTTCGTGCCTC-AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTT
* * *
613274 GGGATTTGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
64 GTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCA
*** * *
613339 TGGAAATCTTTTCTTCATCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCAT
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * *
613404 CGATTCT-AGTAATAGTCTCCATTATTTTTAAGATTGGGAAGTGAAAATACATTCCATTCATTAG
194 CGATTCTCA-TAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAG
* * * * *
613468 TATACATGACATTGGTGCTTTGGTGCCGTAAGAAAAGCTTTTCTTTCCAACGTTTTTCG-TAGAA
258 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTT-GATAGAA
* * * * *
613532 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAAACTAATCCTCATTCATTTCAGGAT
322 TCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGAT
* * * * *
613597 TAGGCACTATAAGCATAG-CTTTCTCATTAGGATACATTATATTGATGCTTTGGTTTCGCAGGAA
387 TAGGCACCATAAACATAGTC-TTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAA
* * **
613661 ATGCTTTTTTTCACACCAATTTCCGT
451 AGGC-TTTTTTCCCACCAATTTTTGT
* * * * *
613687 AAAGTCTTAGTTCGTACCTCAAATGAGACAAACATGGATTCTAGAAAAGATTTTCATTCATTTTG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * * *
613752 TGATTAGGTACTATAAACACATTCTCCTCT-TCAGGATAGATGACATTGATGATTTTATTTTGCC
65 TGATTAGGCACTATAAACACATTCTCCT-TATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* ** * * * * *
613816 TAGAAATCTTTTCTTTATCCTATTTTCCTTAAAATAAAAGTTCATCCCTCAAATATGG-AAGCGT
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * * *
613880 CGATTCTCGTAATAGTCTCCATTCATTTTAGGATTGGGTAA-CGAAAGCACATTCCCTTCATTAA
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGG-AAGCGAAAACACATTCCCTTCATTAG
* * * ** * * *
613944 GATGCAAGAAATTGATGCTTTATTGTCGTAGGAAACGCTTTTCTTTCCACCATTTTTGATAAAAT
258 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
* * * *
614009 CAAAGTTTGTCTTTTAAATATGACAAACATGAATACTTATACTAATCCCTGTTCTTTTCAGGATT
323 CAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATT
* * * *
614074 AGGTACCGTAAACATA---TTCTTATTAAGATACA-CAATATTGATGCTTTGGTTTAGCAAGAAA
388 AGGCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAA
** * *
614135 GG-TTTTTTATTCATGCAAATTTCTGT
452 GGCTTTTTT-CCCA--CCAATTTTTGT
* *
614161 AAAGTCTAAGTTCGT-CACTTAAATGAGACAAACATGGATTCTAGTAATGACCTTCATTCTTTTG
1 AAAGTCTAAGTTCGTGC-CTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTT-
* * * *
614225 GTCATTAGGCACTATGAACACATTATCCTTAATAGGATAAATGATATTGATGATTTTCTTTTGCA
64 GTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* * * * * * *
614290 TGGAAATCTTTTCTTCGACCTATTTTCCTGAAAATCAAAGTTCATCTTTTAAATATGGTAAGTAT
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * *
614355 CGATTCTCATAAT-GTCACCATTCTTTTTAAGATTGGAAAGCGAAAACACATTCTCTTCATTAGG
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGG
* * * * *
614419 GTACATGGCATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTTCATCGTTTTTGATAGAATC
259 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
* * * **
614484 AAAGTTTGT-TTTTAAATACAACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAAATTA
324 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTA
* * *
614548 GGTACCATAAACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGATTTCGCAAGAAAGG
389 GGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGG
* * *
614613 CTTTCTTCCCCCCAATTTTTCT
454 CTTTTTTCCCACCAATTTTTGT
* * *
614635 AAAGTCTAAGTTCTTGCCTTAAATGAGACAAAC----A-TCTAGTAATGATCTTCATTCATTTGG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * * * *
614695 TGATTTGGCACTGTAAACATATTCTCCTAATTATGATAAATGATATTGCTGATTTTCTATTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * *
614760 GGAAATCTTTTCTTTGGCTTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCATC
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
** * * * * *
614825 GATTCTTGTAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACATATTCCCTTCATTAGGA
195 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGA
* * *
614890 TACATGACATTGATGCTTTGGTGTCGTAAAAAAAGCTTTTTTTTCCACCGTTTTTGATAGAA-CG
260 TACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC-
* * * **
614954 AAAGTATGCCTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTTGGATTA
324 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTA
* * *
615019 GGCAGCATAAACATGGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGG
389 GGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGG
* * **
615084 CTTTTTTTTCACACTAATTTTAAT
454 C--TTTTTTCCCACCAATTTTTGT
* * *
615108 AAAGTCTAAGTTCGTGCCTCAAATGAGATAAACATAGATTCTAGTAAAGATCTTCATTCATTTTG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * *
615173 TGAGTAGGTACTATAAACACATTCTCCTCT-TCAAGATAAATTATATTGATGATTTTCTTTTGCA
65 TGATTAGGCACTATAAACACATTCTCCT-TATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* * * * *
615237 TGGAAATCTTTTCTTCGCCCTAGTGTCCTTAAAATTAAAGTTCAT-CTATTAAATATGGCAAGCA
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCT-TTAAATAAGGCAAGCA
* * *
615301 TCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGAGAAACGAGAACACATTCCCTTCATTAG
193 TCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAG
* * * * **
615366 GATACAAGACATTGCTGCTTTGGTGTTGTAAGAAAAGATTACCTTTCCACCATTTTTGATAGAAT
258 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
* * * * *
615431 CAAAGTTTGTCTTTTAAATACGACAAACATGAATACTTATACTAATCCCCATTTTTTTTAGGATT
323 CAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATT
* * * *
615496 AGGTACCATAAGCATAGTCTTCTTATTAGGATAGA-CAATATTGATGCTTTGGTTTCGTAAGAAA
388 AGGCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAA
*
615560 GGCTTTTTTTTCACACCAATTTTTGT
452 GGC--TTTTTTCCCACCAATTTTTGT
* * * **
615586 ---TTCTAAGTTCGTGCCTCTAAA-GAGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTT
1 AAAGTCTAAGTTCGTGCCTC-AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTT
* * * * * *
615647 TTGAATAGGTACTATAAACA-ATTCTCCTCT-TCAGGATAAATGATATTGACGATTTTATTTTGC
64 GTGATTAGGCACTATAAACACATTCTCCT-TATTAGGATAAATGATATTGATGATTTTCTTTTGC
* ** ** ** *
615710 ATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAGCAAACCAAGCT
128 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
* * *
615775 TCGATTCCCATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAG
193 TCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAG
* *
615840 GATACATGAGATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAAT
258 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
* * *
615905 CAAAGTTTGTCTCTTAAATACGACAAATATGAATACTCATACTAATCCCCGTTCTTTTTAGGTTT
323 CAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATT
* * * *
615970 ATGTAGCATAAACATAGTCTTCTTATTAGGATGCATCATATTGATGCTTTGGTTTCGCAAGAAAG
388 AGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAG
* *
616035 GATTTTTTTCACACCAATTTTTGT
453 G-CTTTTTTCCCACCAATTTTTGT
* * * * * * * ** *
616059 AAAGTCTTAGTTTGTGCCTCTAATGAGATAAACATGGATTCTAGCAAAGATTTTTTTTCATTTTT
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * *
616124 TTAATAGGTACTATAAACA-ATTCTCCTCT-TTAGGATAAATGATATTGATGATTTTATTTTTCA
65 TGATTAGGCACTATAAACACATTCTCCT-TATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* ** * ** *
616187 TGGAAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTT
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * * * *
616252 CGATTCTCATAATAGCCCCCATTCTTTTTAAAATTGGGAAGCGAACACACATTCGCTTTATTAGG
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGG
* * * * * *
616317 ATACATGAAATTGATGCTTTAGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATC
259 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
*
616382 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTA
324 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTA
* * * * * *
616447 GGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTAACGTTTTGGTTTCGCAGGAACGG
389 GGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGG
* * *
616512 CTTTTTTCCAACCAATTCTCGT
454 CTTTTTTCCCACCAATTTTTGT
* * *
616534 AAAGTCTAAGTTTGTGACTCAAACGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTGG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTT-G
* * *
616599 TCATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCCTTTT-CA
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTT-CTTTTGCA
*
616663 TGGAAATCTTTTCTTTGTCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG-AC
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA-
* * * * * * * * *
616727 TCGATTCTCGTAACAATCTCCATTCTTTTCATGATTTGGATGCCAAAACACTTTCCCTTCATTAG
193 TCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAG
* * * * * * *
616792 GGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTCTTT-TACCCGTTTTTGATAGAA
258 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCA-CCATTTTTGATAGAA
* * *
616856 TCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGAT
322 TCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGAT
* * * * * * *
616921 TAGACCCCAT----A-AGTCTTCTCT-TTCGAATATATCATAATGATGCTTTGGTTTTGCAAGAA
387 TAGGCACCATAAACATAGTCTTCT-TATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAA
***
616980 AGGCTTTTTTCTTGCCAATTTTTGT
451 AGGCTTTTTTCCCACCAATTTTTGT
* * *
617005 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCTAGTAAAGATCTTCGTTCATTTTG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * *
617070 TGATTAGGTACTATAAACGCATTCTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
** *
617135 GGAAATCTTTTCTTTATCCTATTTTTCTTAAAA-CTAAAGTTCATCCTTTAAATAAGGCAAGCAT
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATC-AAAGTTCATCCTTTAAATAAGGCAAGCAT
* * ** * * *
617199 CAATTCTCATAACAGTCTCCATTCTTTTCCAGATTGAGAAGCAAAAACACATTCCTTTCATTAGG
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGG
* * * * *
617264 ATGCATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCCACAATTATTGAAAGAATC
259 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
* * * *** * *
617329 AAAGTTTGTCTCTTAAATACGACAAACAAGAATACTGATAATAATCCTTATTTTTTTCAGTATTA
324 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTA
* *
617394 GGTACCATAAACATAGTCTTCTTATTAGGATACATAATATT-ATGCTTTGGTTTCGCAAGAAAGG
389 GGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGG
* *
617458 CTTTCTTTCCC-CTAATTTTTAT
454 CTTT-TTTCCCACCAATTTTTGT
* * * * *
617480 AAAGTCTAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTGGTAATGATCTTTATCCATTTAG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * * * *
617545 TAATTTGGCACTATAAGCACATTCTCCTCATCAAGATAAAAGATATTGATGATTTTCTTTTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * *
617610 GGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATC
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
*
617675 GATTCTCGTAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGA
195 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGA
*
617740 TACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCA
260 TACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCA
* * * * **
617805 AAGTTTGTATCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTGCTTTTTAGGATTTC
325 AAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAG
* * * * *
617870 ACAGCATAAATATAGTCTTCTTATTAGGATACAACATATTGATGCTTTGGTTTCGCACGAAAGGC
390 GCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC
* *
617935 TTTTTTCCTACCAATTTTCGT
455 TTTTTTCCCACCAATTTTTGT
* * * **
617956 AAAGTCTAAGTTTGTGTCC-CAAATGAGACAAACATAGATTCTAGTAAAGATCTTTTTTCATTTT
1 AAAGTCTAAGTTCGTG-CCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTT
* * * * * * * *
618020 GTGAATATGTACTATAACCA-ATTCTCCTCT-TCAGGATAAATGATATTTATGATTTTATTTTGT
64 GTGATTAGGCACTATAAACACATTCTCCT-TATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * *
618083 ATGGAAATCTTTT-TTTACCCTATTTTTCTTAAAATTAAAGTTCATGCC-TTAAATAAGGCAAGC
128 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCAT-CCTTTAAATAAGGCAAGC
* * * * * * *
618146 ATCGATTCTTATAACAGTC-CCTATTCTTTTCT-TGATTTGGATGCCAAAGCACATTCCCTTCAT
192 ATCGATTCTCATAATAGTCTCC-ATTCTTTT-TAAGATTGGGAAGCGAAAACACATTCCCTTCAT
* * * *
618209 TAAGG-TAAATGACATTGATGCTTCAGG-GTTGCAAGAAAAGCTTTTCTTT-CACCCATTTTTGA
255 T-AGGATACATGACATTGATGCTT-TGGTGTCGTAAGAAAAGCTTTTCTTTCCA-CCATTTTTGA
* *
618271 TAGAATCAAAGTTTGTCTTTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTC
317 TAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTC
* * * * **
618336 AAGATTAGACACCATAAGCATAGTCTTCTCATT-GGAATACATCATCA-TGATGCTTTGGTTTTA
382 AGGATTAGGCACCATAAACATAGTCTTCTTATTAGG-ATACATCAT-ATTGATGCTTTGGTTTCG
* * *
618399 AAAGAAAGGCTTTTTTCTCACTAATTTTTGT
445 CAAGAAAGGCTTTTTTCCCACCAATTTTTGT
*
618430 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * * * * *
618495 TGATTAGGTACTATAAACAAATTCTACTCATTAAGATAAAATGATATTCACGATTTTATTTTGCA
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGAT-AAATGATATTGATGATTTTCTTTTGCA
*
618560 T-GAAA-------------ATATTTT-CTTAAAATCAAAGTT-AGTCCTTTAAATAAGGCAAGCA
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCA-TCCTTTAAATAAGGCAAGCA
* * * * *
618609 TCGATTCTCATAATAGTCTCTATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAA
193 TCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAG
* * * *
618674 GATGCATGACATTGATGCTTCGGTGTCGTAAGAAAAGCTTTTATTTCCACCATTTTTGACAGAAT
258 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
* * * * * * *
618739 CAAAATTTGTCTCTTAAATACGACAAACAAGAATACTGACAATAATCTCCGTTTTTTTCAGGATT
323 CAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATT
* * * *
618804 AGGTACCATAAAAATAGTCTTCTTTTTAGGATACA-CAATATTGATGCTTTGGTTTCGCTAGAAA
388 AGGCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAA
* * * *
618868 GGCTGTCTTCCCCCCAATTTTTAT
452 GGCTTTTTTCCCACCAATTTTTGT
* *
618892 AAAGTCTAAGTTCGTGTCTCAAATGAGACAAA-ATGGATTCTAGTAATGATCTTTATT-TATTTA
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCT-TTT-
* * * *
618955 GTGATTTGGCACTATAAACACATTCTCCTCATAAGGATAAATGATATTGATGATTTCCTTTTGCA
64 GTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
619020 TGGAAATCTTTTCTTAGCCCTATTTT-C-------C---G---------TAAATATGGCAAGCAT
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
*
619065 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGG
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGG
* *
619130 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTTACAGAATC
259 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
*
619195 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTA
324 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTA
* * *
619260 GGCAGCATAAACATAGTCTTCTTATTAGGATACA-CGATATTTATGCTTTAGTTTCGCAAGAAAG
389 GGCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAG
* * *
619324 GCTTTCTTCCCCCCAATTTTTAT
453 GCTTTTTTCCCACCAATTTTTGT
* * * *
619347 AAAGTCTAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAATGATCTTTAGTCATTTAG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * *
619412 TGATTTGACACTATAAACACACTCTCCTCATAAGGATAAATGATATTGATGATTTTCTTTTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * *
619477 GGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATC
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* *
619542 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGAAAGCAAAAACACATTCCCTTCATTAGGA
195 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGA
* *
619607 TACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTGTTTCCACCATTTTTGATAGAACCA
260 TACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCA
*
619672 AAGTTTGTCCCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTAT-AGGATTA
325 AAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTT-TCAGGATTA
* *
619736 GGCAGCTTAAACATAGTCTTCTTATTAGGATACA-CGATATT-ATGCTTTGGTTTCGCAAGAAAG
389 GGCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAG
* * *
619799 GCTTTCTTCCCCCCAATTTTTAT
453 GCTTTTTTCCCACCAATTTTTGT
* * * * *
619822 AAAGTCAAAGTTCGTGCCTAAAATAAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * *
619887 TGATTTGGCCCTATAAACACATTCTCCTCATAAGGATAAATGATATTGATGATTTTCTTTTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * *
619952 GGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATC
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* *
620017 GATTCTCATAATAGTCTCCATTGTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGA
195 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGA
*
620082 TACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGACAGAATCA
260 TACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCA
* *
620147 AAGTTTGTCTCTTAAATACGACAAACATGAATACTCATATTAATCCCCGTTCTTTTAAGGATTAG
325 AAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAG
* * * *
620212 GCAGCATAAATATAGTCTTCTTATTAGGATACA-CGATATT-ATGTTTTGGTTTCACAAGAAAGG
390 GCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGG
* *
620275 CTTTCTTCCC-CGCAATTTTTAT
454 CTTTTTTCCCAC-CAATTTTTGT
* * *
620297 AAAGTCTAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTGGTAATGATCTTTATTCTTTTAG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTT-G
* * *
620362 TGATTTGGCACTATAAACACATTCTCCTCATAAGGATAAATGATATTGATGATTTTCTTTTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * * * * *
620427 GGAAATCTTTTCTTAGCCCTGTATTCCTTAAAATCAAAGTTAATCTTTTAAATATGGCAAGCATC
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* *
620492 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAATC-AAAATTACATTCCCTTCATTAGG
195 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAA-CACATTCCCTTCATTAGG
* *
620556 ATACATGACATTAATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAGTC
259 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
* * * *
620621 AAAGTTTTTCTCTTAAATACGACAAA-ATTAATACTCATACTAAT-CCCATTCTTTTTAGGATTA
324 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTA
* * * *
620684 GACAGCATAAACATAGTCTTTTTAGTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAAG
389 GGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAG-AAAG
* *
620749 CCTTTTTTTTCACACCAATTTTTGT
453 GC--TTTTTTCCCACCAATTTTTGT
* * * * * * * * * ** *
620774 AAAGTCTTAGTTCATCCCTCTAATGAGATAAACATGGAATCTAGCAAAGATTTTTTTTTAATTTT
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGA-TCTTCATT-CTTTT
* * * * * *
620839 TTGAATAGGTACTATAAACA-ATTCTCCTCT-TCAGGATAATTGATATTGATGATTTTATTTTGC
64 GTGATTAGGCACTATAAACACATTCTCCT-TATTAGGATAAATGATATTGATGATTTTCTTTTGC
* ** * * * ** *
620902 ATGGAAATCTTTTCTTTACGTTATTTTCCTAAAAATCAAAGTTCATGCTTTAAACAAACCAAGCT
128 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
* * * * * * *
620967 TCGATTCTCACAATAGCCCCCATTCTTTTTAAGATTTGGAAGCGAACACATATTCCCTTTATTAG
193 TCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAG
* * * * * * *
621032 GATACATAAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGGTAAAAT
258 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
* * * * *
621097 CAAAGTTTATCTCTTAAATACGACAAACATTAATACTCATGCTAATCCCCATTCTTTTTAGGATT
323 CAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATT
* *
621162 AGGCACCATAAACATAGTCTTCTTATTAGGATACA-CGATATTGATGTTTTGGTTTTGCAAGAAA
388 AGGCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAA
* * *
621226 GGCTTTCTTCCC-CTTAATTTTTAT
452 GGCTTTTTTCCCAC-CAATTTTTGT
* * * * *
621250 AAAGTCTAATTTCGTGCCTCAAATGAGACAAACATGGATTCTAATAATGATCTTTAATCATTTAG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * *
621315 TGATTTGGCACTATAAACACATTCTCCTTGTTCGGATGAATGATATTGATGATTTTCTTTTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * * * * * *
621380 GAAAATCTTTTCTTAGCCCTATTTTCCTTAAAATTAAAGTTTA-GCTTTCAAATAAGGAAAGCCT
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTT-AAATAAGGCAAGCAT
* * * * * * *
621444 CGATTCTCATAACAATCTCCATTCTTTTCATGATTTGGATGCCAAAACACATTCCCTTCATTAGG
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGG
* * * * * *
621509 GTAAATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTTT-TACCCGTTTTTGATAGAAT
259 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCA-CCATTTTTGATAGAAT
* * *
621573 CAAAGTTTGTCTCTTAAATATG----AC---AA-A--CATACTAATCCCCATTCTTTTCAAGATT
323 CAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATT
* * * * * * * * *
621628 AAGCAACATAAATATAGTCTTCTCATTCGAATACATCATAATGATGCTTTGGTTTTGCAAGACAG
388 AGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAG
*
621693 GCTTTTTTCCCACTAATTTTTGT
453 GCTTTTTTCCCACCAATTTTTGT
* * * * * * *
621716 AAAGTCTAAGTTCGCGCCTTAAATGAGAAAAACATGGATTCCAGCAAAGATCTTCGTTCATTTTG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * * * * * * *
621781 TGATTAGGTATTATAAACACATTTTGCTCATTAGGATAAATGAGATTCATGATTTTATTTTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * * * * *
621846 GAAAATCTTTTCTTTACCCTATTTTTCTTAAAATTAAAGTTAATCCTATAAATAAGGCAAGTC-T
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG-CAT
* * * * *
621910 CGATTCTCATAACAGTCTTCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGG
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGG
* *
621975 ATGCATGACATAGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
259 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
* * * * * *
622040 AAAGTTTATCTTTTAAATACGACAAACAAGAATACTGATACTAATCCCCATTTTTTTCAGGATTA
324 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTA
* * *
622105 GGAACCATAAACATAGTCTTCTTATTAGGATACA-CGATATTTATGTTTTGGTTTCGCAAGAAAG
389 GGCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAG
* *
622169 G-TTTTCTTCCC-CTTAATTTTTAT
453 GCTTTT-TTCCCAC-CAATTTTTGT
* * *
622192 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTAATCATTTGG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* ** * *
622257 TGATTTGGCACTATAAACACATTCTCCTCGTTCGGATGAATGATATTGATGATTTTCTTTTGCAT
65 TGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* * * * * *
622322 GAAAATCTTTTCTTAGACCTATTTTCCTTAAAATTAAAGTTCA-GCTTTCAAATATGGCAAGCAT
130 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTT-AAATAAGGCAAGCAT
* *
622386 CGATTCTCATAATAGTCTCTATTCTTTTTAAGATTGGGAA-CTGAAAACACATTCCCTTCATTGG
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGC-GAAAACACATTCCCTTCATTAG
* * *
622450 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGGTTTTATTTCCGCCATTTTTGATAGAAT
258 GATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
* * * *
622515 CAAAGTTTGTCTCTTAAATATGACAAATATGAATACTCATGCTAAT-CCCGTTCTTTTTAGGATT
323 CAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATT
* *
622579 AGGCAGCATAAACATAGTCTTCTTATTAGGATACATAATATTGATGCTTTGGTTTCGCAAGAAAG
388 AGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAG
* *
622644 GCTTTTTTTTCACACGAATTTTTGT
453 GC--TTTTTTCCCACCAATTTTTGT
* * * ** *
622669 AAAGTCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTT
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTG
* * *
622734 TGAATAGGTACTATAAACA-ATTCTCCTT-TTCAGGATAAATGATATTGATGATTTTATTTTGCA
65 TGATTAGGCACTATAAACACATTCTCCTTATT-AGGATAAATGATATTGATGATTTTCTTTTGCA
* * * ** * ** *
622797 AGAAAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTT
129 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * *
622862 CGATTCTCATAATAG-CCCCATTCTTTTTAAGATTGGGAAGTGAAAACAAATTCCCTTCATTAGG
194 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGG
622926 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
259 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
* * * *
622991 AAAGTTTGTCTTTTAAATACGACAAACATGAATACTCATACTAATCCCTGTTCTTTTTAGGATTG
324 AAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTA
* * * * *
623056 GGAAGCATAAACACAGTCTTTTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGA
389 GGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGG
* *
623121 CTTTTTTTTTCACACCAATTTTTGC
454 C---TTTTTTCCCACCAATTTTTGT
* * * * * * **
623146 AAAGTCTTAGTTTGTGCCTCTAATGAGATAAACATGGATTCTA-TCAAAGATTTTTTTTCATTTT
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTCATTC-TTTT
* * * * *
623210 TTGAATAGGTACTATACACA-ATTCTCCTCT-TTAGGATAAATGATATTGATGATTTTATTTTGC
64 GTGATTAGGCACTATAAACACATTCTCCT-TATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * ** * ** *
623273 ATGGAAATATTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCT
128 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
* * * *
623338 TCGATACTCATAATAGCCCCCATTCTTTTTAAGATTGGGAAGC-AAACACACATTCCCTTTATTA
193 TCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAA-ACACATTCCCTTCATTA
* * * * *
623402 GGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAA
257 GGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAA
623467 TCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGAT
322 TCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGAT
* * * * * *
623532 TAGGCACCATAAACGTAGTCTTCTCACTAGGATACATCATATTGACGCTTTGATTTCGCAGGAAA
387 TAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAA
* * *
623597 GGCTTTTTTCCTACCAATTGTCGT
452 GGCTTTTTTCCCACCAATTTTTGT
* * *
623621 AAAGTCTAAGTTTGTGACTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTGG
1 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTGT
* * *
623686 GCATTAGGCACTATAAACACATTCTCCTCAATAGGGA-AAATGACATTGATG
66 G-ATTAGGCACTATAAACACATTCTCCTTATTA-GGATAAATGATATTGATG
623737 CTTTGGGGTT
Statistics
Matches: 10380, Mismatches: 1365, Indels: 429
0.85 0.11 0.04
Matches are distributed among these distances:
455 302 0.03
456 112 0.01
457 3 0.00
458 1 0.00
459 1 0.00
460 27 0.00
461 68 0.01
462 282 0.03
463 11 0.00
464 2 0.00
466 386 0.04
467 9 0.00
468 1 0.00
469 142 0.01
470 119 0.01
471 503 0.05
472 11 0.00
473 239 0.02
474 1034 0.10
475 2037 0.20
476 2629 0.25
477 909 0.09
478 1190 0.11
479 361 0.03
480 1 0.00
ACGTcount: A:0.31, C:0.17, G:0.14, T:0.38
Consensus pattern (475 bp):
AAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTGT
GATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCATG
GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCG
ATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGAT
ACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAA
AGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGG
CACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCT
TTTTTCCCACCAATTTTTGT
Found at i:616476 original size:159 final size:157
Alignment explanation
Indices: 611554--619006 Score: 1757
Period size: 159 Copynumber: 47.1 Consensus size: 157
611544 CATTCTTTTA
* * * * * * * ** * **
611554 ATTAGGATGCATGACATTAAAGCTTTGGTGTCGCAGGAAAAGCTTTTCTTTTTACTATTTTTAAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCA-TTTTCGT
* * * * * * ** * *
611619 AGAATTAAAGTTTGTCTCTTAAATAAGACAAATAAGAATACTCATACTAATCACTGTTATTTTCA
65 AAAATCAAAGTTTGTCTCTTAAAT-AGACAAACATGAATTCTCATACTAATCTCCATTCTTTTTA
* * *
611684 GGATTAGGTACCATAAACATAGTCTTCTC
129 GGATTAGGCACCATAAACATATTCTCCTC
* * * * * * * * *
611713 ATTAGGATACAAGACATCGATACTTTGGTTTCGGAAGAAAGGC-TTTCTTCCCCCCAATTTTTGT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACC-ATTTTCGT
* * * * * * * **
611777 AAAGTCTAAGTTCGTGTCTCAAATGAGACAAACATGGAA-TCT-AGTAATAATCTTCATT-AATT
65 AAAATCAAAGTTTGTCTCTTAAAT-AGACAAACAT-GAATTCTCA-TACTAATCTCCATTCTTTT
* * * * * **
611839 TGGTGATTTGGCACTACAAACACATTCTTTTC
127 TAG-GATTAGGCACCATAAACATATTCTCCTC
* * * * ** * * * * * * *
611871 ATCAGGATAAATGATATTAATGATTTTCTTTTGCATGGAAATCTTTTCTTT-GACCTATTTTCCT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACC-ATTTT-CG
* * * * * * * *
611935 TAAAAACAAAGTTCGTC-CTTTTAATAAGGCAAGCATCG-ATTCTCTTAATAGTCTCCATTCTTT
64 TAAAATCAAAGTTTGTCTC-TTAAAT-AGACAAACAT-GAATTCTCATACTAATCTCCATTCTTT
* * * * * *
611998 TTATG-TTTGGAAAGCAAAAACACATTC-CCTTC
126 TTAGGATTAGG-CACCATAAACATATTCTCC-TC
* * * * * ** * *
612030 ATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAACTGTTCTTTATATCGTTTTCTTT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTC---
* * *
612095 TTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCTCCGA-TCTTT
63 GTAAAATCAAAGTTTGTCTCTTAAAT-AGACAAACATGAATTCTCATACTAATCTCC-ATTCTTT
* * * *
612159 TCAGGATTAGGCAGCATAAACATAGTCTTCTC
126 TTAGGATTAGGCACCATAAACATATTCTCCTC
* * ** * * * * ** *
612191 ATTAAGATACATCATATTGATGCTTTGGTTTCACAAGAAAGGTTTTTTTTTGCATGGATTTTTGT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCA-CCATTTTCGT
* * * * * * * ** * *
612256 AAAGTCTAAGTTTGTGC-CTCAAATGAGGCAAACAAGGATTCT-AGTAATGTTCTACATACTTTT
65 AAAATCAAAGTTTGT-CTCTTAAAT-AGACAAACATGAATTCTCA-TACTAATCTCCATTCTTTT
* * * *
612319 T-GTCATTAGGCACTATAAACACATTCTGCTC
127 TAG-GATTAGGCACCATAAACATATTCTCCTC
* * ** * * * * *
612350 ATTAGGATAAATGATATTGATGATTTTATTTTGCT-TGTAAATCTTTTCTTTGCC-CTATTTTCC
1 ATTAGGATACATGATATTGATGCTTTGGTTTCG-TAAGAAAAGCTTTTCTTT-CCACCATTTT-C
* * * * * * * *
612413 TTAAAATCAAA-TTTCATC-CTTTAAATAAGGCAAGCTTCG-ATTCTCATAGTAGTCTCTATTCT
63 GTAAAATCAAAGTTT-GTCTC-TTAAAT-AGACAAACAT-GAATTCTCATACTAATCTCCATTCT
* * * * *
612475 TTTTAAGATTGGGAAACGA-AAACAAATTC-CCTTC
124 TTTTAGGATTAGG-CACCATAAACATATTCTCC-TC
* * * * * * * *
612509 ATTAGGATACCTAAAATTGCTGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCAACCGTTTTTGAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCG-T
* * * * * *
612574 AGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTATTCCCCGTTCTTTTCA
65 AAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTTTTA
** * *
612639 GGATTAGGCACCATAAATGTAGTCTTCTC
129 GGATTAGGCACCATAAACATATTCTCCTC
* * * * *
612668 ATTAGGATA-ACTCATATTGATGCTTCGGTTTCGCAAG-AAAGGTTTT-TTTCCCACCAATTTTT
1 ATTAGGATACA-TGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTT-CCACC-ATTTTC
** * * ** * * * * *
612730 GTAATGTCGAAGTTCGTGACTTAAATGAGAAAAACATGGATTCT-AGTAATGATCTTCATTC-TT
63 GTAAAATCAAAGTTTGTCTCTTAAAT-AGACAAACATGAATTCTCA-TACTAATCTCCATTCTTT
* * *
612793 TTGGTGATTAGGCACTATAAACATATTCTCCTT
126 TTAG-GATTAGGCACCATAAACATATTCTCCTC
* * * ** * * * * *
612826 ATTAGGATAAATGATGTTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTCGC-CCTATTTTAC
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CACC-ATTTT-C
* * * ** * * * * * * * *
612889 TTAATATCAATGTTCATCTTTTAAATATGGCAAGCATCG-ATTCACGTAATAGTATCCATTCTTT
63 GTAAAATCAAAGTTTGTCTCTTAAATA-GACAAACAT-GAATTCTCATACTAATCTCCATTCTTT
* * * *
612953 TTAAGATT-GGAAAGCGA-AAACACATTC-CCTTC
126 TTAGGATTAGG-CA-CCATAAACATATTCTCC-TC
* ** *
612985 ATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCG-T
* * * * *
613050 AGAATCAAAGTTTGACTTTTAAATACGACAAACATGAATACTCATACTAATC-CTCGTTCTTTTT
65 AAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTC-CATTCTTTTT
* * * * *
613114 AGGATTAGGTACCGTAAACATAGTCTTCTT
128 AGGATTAGGCACCATAAACATATTCTCCTC
* * *
613144 ATTAGGATACATGATATTGATGCTTTCGTTTCGCAAGAAAGGCTTTT-TATT-CACGCAAATTTT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCT-TTCCAC-C--ATTTT
* * * * * * * * * *
613207 TGTAAAGTCTAAGTTTGTGC-CCTAAATGAGACAAACATGGATTCT-AGTAATGATCTTCTTTCA
62 CGTAAAATCAAAGTTTGT-CTCTTAAAT-AGACAAACATGAATTCTCA-TACTAATCTCCATTCT
** * * *
613270 TTTGGGGATTTGGCACTATAAACACATTCTCCTC
124 TTTTAGGATTAGGCACCATAAACATATTCTCCTC
* * ** * * * * *
613304 ATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TT-CATCCTATTTTCC
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCA-CC-ATTTT-C
* ** * * * * * *
613367 TTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCG-ATTCT-AGTAATAGTCTCCATTATT
63 GTAAAATCAAAGTTTGTCTCTTAAATA-GACAAACAT-GAATTCTCA-TACTAATCTCCATTCTT
* * * ** * * *
613430 TTTAAGATTGGGAAGTGA-AAATACATTC-CATTC
125 TTTAGGATTAGGCA-CCATAAACATATTCTC-CTC
* * * ** **
613463 ATTAGTATACATGACATTGGTGCTTTGGTGCCGTAAGAAAAGCTTTTCTTTCCAACGTTTTTCGT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCC-ACCATTTTCGT
* * * * *
613528 AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAAACTAATC-CTCATTCATTTC
65 AAAATCAAAGTTTGTCTCTTAAAT-AGACAAACATGAATTCTCATACTAATCTC-CATTCTTTTT
* *
613592 AGGATTAGGCACTATAAGCATAGCTT-T-CTC
128 AGGATTAGGCACCATAAACATA--TTCTCCTC
* * * * *
613622 ATTAGGATACATTATATTGATGCTTTGGTTTCGCAGGAAATGCTTTT-TTTCACACCAATTTCCG
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CACC-ATTTTCG
* ** * * * * ** * * *
613686 TAAAGTCTTAGTTCGTAC-CTCAAATGAGACAAACATGGATTCT-AGAAAAGATTTTCATTCATT
64 TAAAATCAAAGTTTGT-CTCTTAAAT-AGACAAACATGAATTCTCATACTA-ATCTCCATTCTTT
* * *
613749 TT-GTGATTAGGTACTATAAACACATTCTCCTC
126 TTAG-GATTAGGCACCATAAACATATTCTCCTC
* * * ** * *
613781 -TTCAGGATAGATGACATTGATGATTTTATTTTGCCT-AG-AAATCTTTTCTTT--ATCCTATTT
1 ATT-AGGATACATGATATTGATG-CTTTGGTTT-CGTAAGAAAAGCTTTTCTTTCCA-CC-ATTT
* * ** * * * * * * * *
613841 TCCTTAAAATAAAAGTTCATCCCTCAAATATG-GAAGCGTCG-ATTCTCGTAATAGTCTCCATTC
61 T-CGTAAAATCAAAGTTTGTCTCTTAAATA-GACAAACAT-GAATTCTCATACTAATCTCCATTC
* * * * * *
613904 ATTTTAGGATTGGGTAACGA-AAGCACATTC-CCTTC
123 TTTTTAGGATTAGG-CACCATAAACATATTCTCC-TC
* * * * * * * *
613939 ATTAAGATGCAAGAAATTGATGCTTT-ATTGTCGTAGGAAACGCTTTTCTTTCCACCATTTTTGA
1 ATTAGGATACATGATATTGATGCTTTGGTT-TCGTAAGAAAAGCTTTTCTTTCCACCATTTTCG-
* * * *
614003 TAAAATCAAAGTTTGTCTTTTAAATATGACAAACATGAATACTTATACTAATC-CCTGTTCTTTT
64 TAAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCC-ATTCTTTT
* * *
614067 CAGGATTAGGTACCGTAAACATATTCT--T-
127 TAGGATTAGGCACCATAAACATATTCTCCTC
* ** * * * * * *
614095 ATTAAGATACACAATATTGATGCTTTGGTTTAGCAAG-AAAGGTTTT-TTATTCATGCAAATTTC
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTT-TCCA--CCATTTTC
* * * * * * * * *
614158 TGTAAAGTCTAAGTTCGTCACTTAAATGAGACAAACATGGATTCT-AGTAATGACCTTCATTC-T
63 -GTAAAATCAAAGTTTGTCTCTTAAAT-AGACAAACATGAATTCTCA-TACTAATCTCCATTCTT
* * * * *
614221 TTT-GGTCATTAGGCACTATGAACACATTATCCTT
125 TTTAGG--ATTAGGCACCATAAACATATTCTCCTC
* * * ** * * * * * * *
614255 AATAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTCGACCTATTTTCCT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACC-ATTTTCGT
** * ** ** * * *
614319 GAAAATCAAAGTTCATCTTTTAAATATGGTAAGTATCG-ATTCTCATAAT-GTCACCATTCTTTT
65 -AAAATCAAAGTTTGTCTCTTAAATA-GACAAACAT-GAATTCTCATACTAATCTCCATTCTTTT
* * * * *
614382 TAAGATT-GGAAAGCGA-AAACACATTCTCTTC
127 TAGGATTAGG-CA-CCATAAACATATTCTCCTC
* ** * * * * *
614413 ATTAGGGTACATGGCATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTTCATCGTTTTTGAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCG-T
* * * * * *
614478 AGAATCAAAGTTTGT-TTTTAAATACAACAAACATGAATACTCATACTAATCCCCATTCTTTTCA
65 AAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTTTTA
** * * * *
614542 AAATTAGGTACCATAAACATAGTCTTCTT
129 GGATTAGGCACCATAAACATATTCTCCTC
* * * * *
614571 ATTAGGATACATGATATTGATGCTTTGATTTCGCAAGAAAGGC-TTTCTTCCCCCCAATTTTTC-
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACC-A-TTTTCG
* * * * * *
614634 TAAAGTCTAAGTTCT-TGC-CTTAAATGAGACAAAC----A-TCT-AGTAATGATCTTCATTC-A
64 TAAAATCAAAGTT-TGT-CTCTTAAAT-AGACAAACATGAATTCTCA-TACTAATCTCCATTCTT
* * ** *
614690 TTTGGTGATTTGGCACTGTAAACATATTCTCCTA
125 TTTAG-GATTAGGCACCATAAACATATTCTCCTC
* * * * ** * * * * * **
614724 ATTATGATAAATGATATTGCTGATTTTCTATT-GCATGGAAATCTTTTCTTTGGC-TTATTTTCC
1 ATTAGGATACATGATATTGATGCTTTGGT-TTCGTAAGAAAAGCTTTTCTTT-CCACCATTTT-C
* ** * * * ** *
614787 TTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCATCG-ATTCTTGTAAC-AGTCTCCATTCTT
63 GTAAAATCAAAGTTTGTCTCTTAAAT-AGACAAACAT-GAATTCTCAT-ACTAATCTCCATTCTT
* * * * *
614850 TTCAAGATT-GAGAAGCAAAAACATATTC-CCTTC
125 TTTAGGATTAG-GCACCATAAACATATTCTCC-TC
* * * * * *
614883 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAAAAAAGCTTTTTTTTCCACCGTTTTTGAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCG-T
* * * * * * *
614948 AGAA-CGAAAGTATGCCTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTT
65 AAAATC-AAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTTTT
* * ** *
615012 TGGATTAGGCAGCATAAACATGGTCTTCTC
128 AGGATTAGGCACCATAAACATATTCTCCTC
* * * * * **
615042 ATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTAATTTTAA
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CAC-CATTTTCG
* * * * * * * *
615107 TAAAGTCTAAGTTCGTGC-CTCAAATGAGATAAACAT-AGATTCT-AGTA-AAGATCTTCATTCA
64 TAAAATCAAAGTTTGT-CTCTTAAAT-AGACAAACATGA-ATTCTCA-TACTA-ATCTCCATTCT
* * * *
615168 TTTT-GTGAGTAGGTACTATAAACACATTCTCCTC
124 TTTTAG-GATTAGGCACCATAAACATATTCTCCTC
* * * * ** * * * * * * *
615202 -TTCAAGATAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTCGC-CCTAGTGTC
1 ATT-AGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CACC-A-TTTT
* * ** * * * * *
615264 CTTAAAATTAAAGTTCATCTATTAAATATGGCAAGCATCG-ATTCTCATAATAGTCTCCATTCTT
62 CGTAAAATCAAAGTTTGTCTCTTAAATA-GACAAACAT-GAATTCTCATACTAATCTCCATTCTT
* ** * * *
615328 TTTAAGATTGAGAAACGA-GAACACATTC-CCTTC
125 TTTAGGATT-AGGCACCATAAACATATTCTCC-TC
* * * * ** *
615361 ATTAGGATACAAGACATTGCTGCTTTGGTGTT-GTAAGAAAAGATTACCTTTCCACCATTTTTGA
1 ATTAGGATACATGATATTGATGCTTTGGT-TTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCG-
* * * * * *
615425 TAGAATCAAAGTTTGTCTTTTAAATACGACAAACATGAATACTTATACTAATCCCCATTTTTTTT
64 TAAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTTTT
* * * * *
615490 AGGATTAGGTACCATAAGCATAGTCTTCTT
128 AGGATTAGGCACCATAAACATATTCTCCTC
* ** * * *
615520 ATTAGGATAGACAATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTTTTTTCACACCAATTTTTG
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CACC-ATTTTCG
* * * * * * * ***
615585 T---TTCTAAGTTCGTGC-CTCTAAAGAGATAAACATGGATTCT-AGTA-AAGATCTTTTTTCAT
64 TAAAATCAAAGTTTGT-CTCT-TAAATAGACAAACATGAATTCTCA-TACTA-ATCTCCATTC-T
* * * *
615644 TTTT-TGAATAGGTACTATAAACA-ATTCTCCTC
124 TTTTAGGATTAGGCACCATAAACATATTCTCCTC
* * * ** * * * * * * *** *
615676 -TTCAGGATAAATGATATTGACGATTTTATTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCT
1 ATT-AGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTT-CG
** ** * * * * * ** *
615740 TAAAATCAAAGTTCATC-CTTTAAGCAAACCAAGCTTCG-ATTCCCATAATAGCCCCCATTCTTT
64 TAAAATCAAAGTTTGTCTC-TTAAATAGA-CAAACAT-GAATTCTCATACTAATCTCCATTCTTT
* * * * *
615803 TTAAGATTGGGAAGCGA-AAACACATTC-CCTTC
126 TTAGGATTAGGCA-CCATAAACATATTCTCC-TC
* * * *
615835 ATTAGGATACATGAGATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTTCACCATTTTTGAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCG-T
* * * * *
615900 AGAATCAAAGTTTGTCTCTTAAATACGACAAATATGAATACTCATACTAATCCCCGTTCTTTTTA
65 AAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTTTTA
* * * * * * *
615965 GGTTTATGTAGCATAAACATAGTCTTCTT
129 GGATTAGGCACCATAAACATATTCTCCTC
* * * * * *
615994 ATTAGGATGCATCATATTGATGCTTTGGTTTCGCAAGAAAGGATTTT-TTTCACACCAATTTTTG
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CACC-ATTTTCG
* ** * * * * ** * *
616058 TAAAGTCTTAGTTTGTGC-CTCT-AATGAGATAAACATGGATTCTAGCAAAGATTTTTTTTCATT
64 TAAAATCAAAGTTTGT-CTCT-TAAAT-AGACAAACATGAATTCT--C--ATACTAATCTCCATT
* *
616121 -TTTTTA--A-TAGGTACTATAAACA-ATTCTCCTC
122 CTTTTTAGGATTAGGCACCATAAACATATTCTCCTC
* * * ** * * * * * *** *
616152 TTTAGGATAAATGATATTGATGATTTTATTT-TTCATGGAAATCTTTTCTTTACGTTATTTTCCT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGT-AAGAAAAGCTTTTCTTTCCACCATTTT-CG
** * * * * * ** *
616216 TAAAATCAAAGTTCATC-CTTTAAACAAACCAAGCTTCG-ATTCTCATAATAGCCCCCATTCTTT
64 TAAAATCAAAGTTTGTCTC-TTAAATAGA-CAAACAT-GAATTCTCATACTAATCTCCATTCTTT
** * * * * * * * *
616279 TTAAAATTGGGAAGCGA-ACACACATTCGCTTT
126 TTAGGATTAGGCA-CCATAAACATATTCTCCTC
* * * * *
616311 ATTAGGATACATGAAATTGATGCTTTAGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCG-T
* * *
616376 AAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTA
65 AAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTTTTA
* *
616441 GGATTAGGCACCATAAACATAGTCTTCTC
129 GGATTAGGCACCATAAACATATTCTCCTC
* * * * * * ** *
616470 ATTAGGATACATCATATTAACGTTTTGGTTTCGCAGGAACGGC-TTT-TTTCCAACCAATTCTCG
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCC-ACC-ATTTTCG
* * ** * * * * * *
616533 TAAAGTCTAAGTTTGTGACTCAAACGAGACAAACATGGATTCT-AGTAATGATCTTCATTC-TTT
64 TAAAATCAAAGTTTGTCTCTTAAA-TAGACAAACATGAATTCTCA-TACTAATCTCCATTCTTTT
* *
616596 T-GGTCATTAGGCACTATAAACACATTCTCCTC
127 TAGG--ATTAGGCACCATAAACATATTCTCCTC
* * * ** * * * * *
616628 AATAGGATAAATGATATTGATGATTTTCCTTT--TCATGGAAATCTTTTCTTTGTC-CTATTTTC
1 ATTAGGATACATGATATTGATG-CTTTGGTTTCGT-AAGAAAAGCTTTTCTTT-CCACCATTTT-
* ** * *
616690 CTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGAC-TCG-ATTCTCGTAAC-AATCTCCATT
62 CGTAAAATCAAAGTTTGTCTC-TTAAAT-AGACAA-ACAT-GAATTCTCAT-ACTAATCTCCATT
* * *
616751 CTTTTCATGATTTGG-ATGCCA-AAACACT-TTC-CCTTC
122 CTTTTTAGGATTAGGCA--CCATAAACA-TATTCTCC-TC
* * * * * * * *
616787 ATTAGGGTAAATGACATTGATGCTTTGGGGTT-GCAAGAAAAGCTTTTCTTT-TACCCGTTTTTG
1 ATTAGGATACATGATATTGATGCTTT-GGTTTCGTAAGAAAAGCTTTTCTTTCCA-CCATTTTCG
* * *
616850 ATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTTTT
64 -TAAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTTT
* * * * * *
616915 CAAGATTAGACCCCAT-AA-GTCTTCT-CT-
127 TAGGATTAGGCACCATAAACATATTCTCCTC
* * * * * * * * * *
616942 -TTCGAATATATCATAATGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCTTGCCA--ATTTTTG
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGC--TTTTCTTTCCACCATTTTCG
* * * * * * * * * *
617004 TAAAGTCTAAGTTCGTGC-CTCAAATGAGACAAATATGGATTCT-AGTA-AAGATCTTCGTTCAT
64 TAAAATCAAAGTTTGT-CTCTTAAAT-AGACAAACATGAATTCTCA-TACTA-ATCTCCATTCTT
* * ** *
617066 TTT-GTGATTAGGTACTATAAACGCATTCTGCTC
125 TTTAG-GATTAGGCACCATAAACATATTCTCCTC
* * ** * * * * *
617099 ATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTT--ATCCTATTTTTC
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCA-CC-A-TTTTC
* ** * * * *
617162 TTAAAA-CTAAAGTTCATC-CTTTAAATAAGGCAAGCATCAATTCTCATAAC-AGTCTCCATTCT
63 GTAAAATC-AAAGTTTGTCTC-TTAAAT-AGACAAACATGAATTCTCAT-ACTAATCTCCATTCT
* * * * * *
617224 TTTCCA-GATT-GAGAAGCAAAAACACATTC-CTTTC
124 TTT-TAGGATTAG-GCACCATAAACATATTCTC-CTC
* * * * * *
617258 ATTAGGATGCATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCCACAATTATT-GA
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATT-TTCGT
* * * * *
617322 AAGAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACTGATAATAATC-CTTATT-TTTT
65 AA-AATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTC-CATTCTTTT
* * * * *
617385 TCAGTATTAGGTACCATAAACATAGTCTTCTT
127 T-AGGATTAGGCACCATAAACATATTCTCCTC
* * * **
617417 ATTAGGATACATAATATT-ATGCTTTGGTTTCGCAAGAAAGGC-TTTCTTTCC-CCTAATTTTTA
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACC--ATTTTCG
* * * * * ** * * ** **
617479 TAAAGTCTAAGTTCGTGC-CTCAAATAAGACAAACATGGATTCTGGTAATGATCTTTA-TCCATT
64 TAAAATCAAAGTTTGT-CTCTTAAAT-AGACAAACATGAATTCTCATACTAATCTCCATTCTTTT
* * * * *
617542 TAGTAATTTGGCACTATAAGCACATTCTCCTC
127 TAG-GATTAGGCACCATAAACATATTCTCCTC
* * * * * ** * * * * * * * *
617574 ATCAAGATAAAAGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCC-CTATTTTCCT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTT-TCCACCATTTT-CG
** * * * * * *
617638 TAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCG-ATTCTCGTAATAGTCTCCATTCTTTT
64 TAAAATCAAAGTTTGTCTCTTAAATA-GACAAACAT-GAATTCTCATACTAATCTCCATTCTTTT
* * * * *
617702 TAAGATTGGGAAGCGA-AAACACATTC-CCTTC
127 TAGGATTAGGCA-CCATAAACATATTCTCC-TC
* *
617733 ATTAGGATACATGACATTGATGCTTTGGTGTT-GTAAGAAAAGCTTTTCTTTCCACCATTTTTGA
1 ATTAGGATACATGATATTGATGCTTTGGT-TTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCG-
* * * * * *
617797 TAGAATCAAAGTTTGTATCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTGCTTTTT
64 TAAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTTTT
*** * * * * *
617862 AGGATTTCACAGCATAAATATAGTCTTCTT
128 AGGATTAGGCACCATAAACATATTCTCCTC
** * * *
617892 ATTAGGATACAACATATTGATGCTTTGGTTTCGCACGAAAGGC-TTT-TTTCCTACCAATTTTCG
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCC-ACC-ATTTTCG
* * * ** * *** *
617955 TAAAGTCTAAGTTTGTGTCCCAAATGAGACAAACAT-AGATTCT-AGTA-AAGATCTTTTTTCAT
64 TAAAATCAAAGTTTGTCTCTTAAAT-AGACAAACATGA-ATTCTCA-TACTA-ATCTCCATTCTT
* * * * *
618017 TTT-GTGAATATGTACTATAACCA-ATTCTCCTC
125 TTTAG-GATTAGGCACCATAAACATATTCTCCTC
* * * ** * * * * *
618049 -TTCAGGATAAATGATATTTATGATTTTATTTTGTATGGAAATCTTTT-TTTACC-CTATTTTTC
1 ATT-AGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTT-CCACCA-TTTTC
* * * * * *
618111 TTAAAATTAAAGTTCATG-C-CTTAAATAAGGCAAGCATCG-ATTCTTATAAC-AGTC-CCTATT
63 GTAAAATCAAAGTT--TGTCTCTTAAAT-AGACAAACAT-GAATTCTCAT-ACTAATCTCC-ATT
* * * *
618171 CTTTTCT-TGATTTGG-ATGCCA-AAGCACATTC-CCTTC
122 CTTTT-TAGGATTAGGCA--CCATAAACATATTCTCC-TC
* * * * * *
618207 ATTAAGG-TAAATGACATTGATGCTTCAGGGTT-GCAAGAAAAGCTTTTCTTT-CACCCATTTTT
1 ATT-AGGATACATGATATTGATGCTT-TGGTTTCGTAAGAAAAGCTTTTCTTTCCA-CCATTTTC
* * * * *
618269 GATAGAATCAAAGTTTGTCTTTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTT
63 G-TAAAATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTT
* * * * * *
618334 TCAAGATTAGACACCATAAGCATAGTCTTCTC
126 TTAGGATTAGGCACCATAAACATATTCTCCTC
* *** * *
618366 ATT-GGAATACATCATCA-TGATGCTTTGGTTTTAAAAGAAAGGC-TTT-TTTCTCACTAATTTT
1 ATTAGG-ATACATGAT-ATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CAC-CATTTT
* * * * * * * *
618427 TGTAAAGTCTAAGTTCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTA-AAGATCTTCATTC
62 CGTAAAATCAAAGTTTGT-CTCTTAAAT-AGACAAACATGAATTCTCA-TACTA-ATCTCCATTC
* * * * *
618489 ATTTT-GTGATTAGGTACTATAAACAAATTCTACTC
123 TTTTTAG-GATTAGGCACCATAAACATATTCTCCTC
* * * * * ** * * * *
618524 ATTAAGATAAAATGATATTCACGATTTTATTTTGCATGAAAA---------T-----ATTTTCTT
1 ATTAGGAT-ACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCGT
* * * * * *
618575 AAAATCAAAGTTAGTC-CTTTAAATAAGGCAAGCATCG-ATTCTCATAATAGTCTCTATTCTTTT
65 AAAATCAAAGTTTGTCTC-TTAAAT-AGACAAACAT-GAATTCTCATACTAATCTCCATTCTTTT
* * * * * *
618638 CAAGATT-GAGAAGCAAAAACACATTC-CCTTC
127 TAGGATTAG-GCACCATAAACATATTCTCC-TC
* * * * * * *
618669 ATTAAGATGCATGACATTGATGCTTCGGTGTCGTAAGAAAAGCTTTTATTTCCACCATTTTTG-A
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCGTA
* * * * * * *
618733 CAGAATCAAAATTTGTCTCTTAAATACGACAAACAAGAATACTGACAATAATCTCCGTT-TTTTT
66 -A-AATCAAAGTTTGTCTCTTAAATA-GACAAACATGAATTCTCATACTAATCTCCATTCTTTTT
* * * * *
618797 CAGGATTAGGTACCATAAAAATAGTCTTCTT
128 -AGGATTAGGCACCATAAACATATTCTCCTC
* ** * * * * **
618828 TTTAGGATACACAATATTGATGCTTTGGTTTCGCT-AGAAAGGC-TGTCTTCCCCCCAATTTTTA
1 ATTAGGATACATGATATTGATGCTTTGGTTTCG-TAAGAAAAGCTTTTCTTTCCACC-ATTTTCG
* * * * * * * * ** *
618891 TAAAGTCTAAGTTCGTGTCTCAAATGAGACAAA-ATGGATTCT-AGTAATGATCTTTATT-TATT
64 TAAAATCAAAGTTTGTCTCTTAAAT-AGACAAACATGAATTCTCA-TACTAATCTCCATTCTTTT
* * *
618953 TAGTGATTTGGCACTATAAACACATTCTCCTC
127 TAG-GATTAGGCACCATAAACATATTCTCCTC
* *
618985 ATAAGGATAAATGATATTGATG
1 ATTAGGATACATGATATTGATG
619007 ATTTCCTTTT
Statistics
Matches: 5143, Mismatches: 1676, Indels: 952
0.66 0.22 0.12
Matches are distributed among these distances:
144 24 0.00
145 74 0.01
146 3 0.00
152 10 0.00
153 123 0.02
154 87 0.02
155 28 0.01
156 109 0.02
157 464 0.09
158 1142 0.22
159 2532 0.49
160 375 0.07
161 147 0.03
162 18 0.00
163 7 0.00
ACGTcount: A:0.31, C:0.17, G:0.14, T:0.38
Consensus pattern (157 bp):
ATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCGTA
AAATCAAAGTTTGTCTCTTAAATAGACAAACATGAATTCTCATACTAATCTCCATTCTTTTTAGG
ATTAGGCACCATAAACATATTCTCCTC
Found at i:619343 original size:159 final size:157
Alignment explanation
Indices: 619070--629636 Score: 2831
Period size: 159 Copynumber: 66.8 Consensus size: 157
619060 AGCATCGATT
* * * * * * *
619070 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTC-CCTTCATTAGGATAC
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTT-ATTAGGATAC
* * * *
619134 ATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTTACAGAATCAAAG
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTA-A-AATCAAAG
*
619199 TTTGTCTCTTAAATACGACAAACATGAATA
128 TTCGTCTCTTAAATACGACAAACATGAATA
* * * *
619229 CTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCATAAACATAGTCTTCTTATTAGGATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * * * * *
619294 CGATATTTATGCTTTAGTTTCGCAAGAAAGGC-TTTCTTCCCCCCAATTTTTATAAAGTCTAAGT
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCC-ATTTTT-TAAAATCAAAGT
* * * *
619358 TCGTGC-CTCAAATAAGACAAACATGGATT
129 TCGT-CTCTTAAATACGACAAACATGAATA
* *** * * * * * * *
619387 CT-AGTAATGATCTTTAGTC-ATTTAGTGATTTGACA-CTATAAACACACTCTCCTCATAAGGAT
1 CTCA-TAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT
* * ** * * * * ** *
619449 AAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAA
63 ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATCAA
* * * * * *
619514 AGTTCATCTTTTAAATATGGCAAGCATCG-ATT
126 AGTTCGTCTCTTAAATACGACAAACAT-GAATA
* * * * * *
619546 CTCATAATAGTCTCCATTCTTTTTAAGATT-GGAAAGCAAAAACACATTC-CCTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGG-CAGCATAAACACAGTCTCCTT-ATTAGGATA
* * * * * * *
619609 CATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTGTTTCCACCATTTTTGATAGAACCAAA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCAAA
* *
619674 GTTTGTCCCTTAAATACGACAAACATGAATA
127 GTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * *
619705 CTCATACTAATCCCCGTTCTTTATAGGATTAGGCAGCTTAAACATAGTCTTCTTATTAGGATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * *
619770 CGATATT-ATGCTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCCCCAATTTTTATAAAGTCAAAGT
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCC-ATTTTT-TAAAATCAAAGT
* * * *
619833 TCGTGC-CTAAAATAAGACAAACATGGATT
129 TCGT-CTCTTAAATACGACAAACATGAATA
* *** * * * * * *
619862 CT-AGTAATGATCTTTATTC-ATTTAGTGATTTGGC-CCTATAAACACATTCTCCTCATAAGGAT
1 CTCA-TAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT
* * ** * * * * ** *
619924 AAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAA
63 ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATCAA
* * * * * *
619989 AGTTCATCTTTTAAATATGGCAAGCATCG-ATT
126 AGTTCGTCTCTTAAATACGACAAACAT-GAATA
* * * * * * * *
620021 CTCATAATAGTCTCCATTGTTTTTAAGATTGGGAAGCAAAAACACATTC-CCTTCATTAGGATAC
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTT-ATTAGGATAC
* * * * *
620085 ATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGACAGAATCAAAG
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTA-A-AATCAAAG
*
620150 TTTGTCTCTTAAATACGACAAACATGAATA
128 TTCGTCTCTTAAATACGACAAACATGAATA
* * * * * *
620180 CTCATATTAATCCCCGTTCTTTTAAGGATTAGGCAGCATAAATATAGTCTTCTTATTAGGATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * * * *
620245 CGATATT-ATGTTTTGGTTTCACAAGAAAGGC-TTTC-TTCCCCGCAATTTTTATAAAGTCTAAG
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCC-C-ATTTTT-TAAAATCAAAG
* * * *
620307 TTCGTGC-CTCAAATAAGACAAACATGGATT
128 TTCGT-CTCTTAAATACGACAAACATGAATA
** * *** * * * *
620337 CTGGTAATGATCTTTATTC-TTTTAGTGATTTGGCA-CTATAAACACATTCTCCTCATAAGGATA
1 CTCATAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGATA
* * ** * * * * * ** **
620400 AATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTGTATTCCTTAAAATCAAA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT-TCCC-CCATTTTTTAAAATCAAA
** * * * * *
620465 GTTAATCTTTTAAATATGGCAAGCATCG-ATT
127 GTTCGTCTCTTAAATACGACAAACAT-GAATA
* * * * * * * *
620496 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAATCA-AAATTACATTC-CCTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAA-CACAGTCTCCTT-ATTAGGATA
* * * * * * *
620559 CATGACATTAATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAGTCAAA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCAAA
** *
620624 GTTTTTCTCTTAAATACGACAAA-ATTAATA
127 GTTCGTCTCTTAAATACGACAAACATGAATA
* * * ** *
620654 CTCATACTAAT-CCCATTCTTTTTAGGATTAGACAGCATAAACATAGTCTTTTTAGTAGGATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * * **
620718 TCATATTGATGCTTTGGTTTCGCAAGAAAAGCCTTTTTTTTCACACCAATTTTTGTAAAGTCTTA
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAG-CTTTTCTTTC-C-CCCATTTTT-TAAAATCAAA
* * *
620783 GTTCATCCCTCT-AATGA-GATAAACATGGAAT-
127 GTTCGTCTCT-TAAAT-ACGACAAACAT-GAATA
* * ***** * * * * * *
620814 CTAGCA-AAGATTTTTTTTTAATTTTT-TGAATAGGTA-CTATAAACA-ATTCTCCTCT-TCAGG
1 CT--CATAATAATCCCCATT-CTTTTTAGGATTAGGCAGC-ATAAACACAGTCTCCT-TATTAGG
* ** * * * * * *** *
620874 ATA-ATTGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCTAAAAAT
61 ATACA-TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAAT
* * * * * *
620938 CAAAGTTCATGCT-TTAAACA-AACCAAGCTTCG-ATT
123 CAAAGTTCGT-CTCTTAAATACGA-CAAACAT-GAATA
* ** * * * * * *
620973 CTCACAATAGCCCCCATTCTTTTTAAGATTTGGAAGCGA-ACACATATTC-CCTTTATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGC-ATAAACACAGTCTCC-TTATTAGGATA
* * * ** * * *
621036 CATAAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGGTAAAATCAAA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATCAAA
** *
621101 GTTTATCTCTTAAATACGACAAACATTAATA
127 GTTCGTCTCTTAAATACGACAAACATGAATA
** * * *
621132 CTCATGCTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * * * * * *
621197 CGATATTGATGTTTTGGTTTTGCAAGAAAGGC-TTTC-TTCCCCTTAATTTTTATAAAGTCTAAT
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCC--CATTTTT-TAAAATCAAAG
* * *
621260 TTCGTGC-CTCAAATGA-GACAAACATGGATT
128 TTCGT-CTCTTAAAT-ACGACAAACATGAATA
* * *** * * * * * *
621290 CTAATAATGATCTTTAATC-ATTTAGTGATTTGGCA-CTATAAACACATTCTCCTTGTTCGGATG
1 CTCATAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT-
* ** * * * ** * *
621353 A-ATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTAGCCCTATTTTCCTTAAAATTAA
63 ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATCAA
* * * * *
621417 AGTTTAG-CT-TTCAAATAAGGA-AAGCCTCG-ATT
126 AG-TTCGTCTCTT-AAAT-ACGACAAACAT-GAATA
* * * * * * *
621449 CTCATAACAATCTCCATTCTTTTCATGATTTGG-ATGCCA-AAACACATTC-CCTTCATTAGGGT
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCA-G-CATAAACACAGTCTCCTT-ATTAGGAT
* * ** * *
621511 AAATGACATTGATGCTTTGGTGTT-GCAAGAAAAGCTTTTCTTTTACCCGTTTTTGATAGAATCA
63 ACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCA
* *
621575 AAGTTTGTCTCTTAAATATGACAAAC----ATA
125 AAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * * * * *
621604 --C----TAATCCCCATTCTTTTCAAGATTAAGCAACATAAATATAGTCTTCTCATTCGAATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * * * * * *
621663 TCATAATGATGCTTTGGTTTTGCAAGACAGGC-TTT-TTTCCCACTAATTTTTGTAAAGTCTAAG
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCC-C-CATTTTT-TAAAATCAAAG
* * * *
621726 TTCG-CGCCTTAAATGA-GAAAAACATGGATT
128 TTCGTC-TCTTAAAT-ACGACAAACATGAATA
* ** * * * ** * * * *
621756 C-CAGCAA-AGATCTTCGTTCATTTT-GTGATTAGGTATTATAAACACATTTTGCTCATTAGGAT
1 CTCA-TAATA-ATCCCCATTCTTTTTAG-GATTAGGCAGCATAAACACAGTCTCCTTATTAGGAT
* * * * ** * * * * * *
621818 AAATGAGATTCATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATTAA
63 ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCA-TTTT-TTAAAATCAA
** * * * *
621883 AGTTAATC-CTATAAATAAGGCAAGTC-TCG-ATT
126 AGTTCGTCTCT-TAAATACGACAA-ACAT-GAATA
* * ** * * * * * *
621915 CTCATAACAGTCTTCATTCTTTTCAAGATT-GAGAAGCAAAAACACATTC-CCTTCATTAGGATG
1 CTCATAATAATCCCCATTCTTTTTAGGATTAG-GCAGCATAAACACAGTCTCCTT-ATTAGGATA
* * * * * *
621978 CATGACATAGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCAAA
** * *
622043 GTTTATCTTTTAAATACGACAAACAAGAATA
127 GTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * *
622074 CTGATACTAATCCCCATT-TTTTTCAGGATTAGGAACCATAAACATAGTCTTCTTATTAGGATAC
1 CTCATAATAATCCCCATTCTTTTT-AGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATAC
* * * * * * *
622138 ACGATATTTATGTTTTGGTTTCGCAAG-AAAGGTTTTC-TTCCCCTTAATTTTTATAAAGTCTAA
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCC--CATTTTT-TAAAATCAAA
* * *
622201 GTTCGTGC-CTCAAATGA-GACAAACATGGATT
127 GTTCGT-CTCTTAAAT-ACGACAAACATGAATA
* *** * * * * * ** *
622232 CT-AGTAATGATCTTTAATC-ATTTGGTGATTTGGCA-CTATAAACACATTCTCCTCGTTCGGAT
1 CTCA-TAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT
* ** * * * *** * *
622294 GA-ATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTAGACCTATTTTCCTTAAAATTA
63 -ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATCA
* * * *
622358 AAGTTCAG-CT-TTCAAATATGGCAAGCATCG-ATT
125 AAGTTC-GTCTCTT-AAATACGACAAACAT-GAATA
* * * * * * * *
622391 CTCATAATAGTCTCTATTCTTTTTAAGATT-GGGAAC-TGAAAACACATTC-CCTTCATTGGGAT
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCAT--AAACACAGTCTCCTT-ATTAGGAT
* * * * * * *
622453 ACATGACATTGATGCTTTGGTGTCGTAAGAAAAGGTTTTATTTCCGCCATTTTTGATAGAATCAA
63 ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCAA
* * *
622518 AGTTTGTCTCTTAAATATGACAAATATGAATA
126 AGTTCGTCTCTTAAATACGACAAACATGAATA
** * * *
622550 CTCATGCTAAT-CCCGTTCTTTTTAGGATTAGGCAGCATAAACATAGTCTTCTTATTAGGATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * ** * *
622614 TAATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACGAATTTTTGTAAAGTCTAAG
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-C-CCCATTTTT-TAAAATCAAAG
* * *
622679 TTCGTGC-CTCT-AATGA-GATAAACATGGATT
128 TTCGT-CTCT-TAAAT-ACGACAAACATGAATA
**** * * * *
622709 CT-AGTAA-AGATCTTTTTTCATTTTT-TGAATAGGTA-CTATAAACA-ATTCTCCTT-TTCAGG
1 CTCA-TAATA-ATCCCCATTC-TTTTTAGGATTAGGCAGC-ATAAACACAGTCTCCTTATT-AGG
* * ** * * * ***
622768 ATAAATGATATTGATGATTTTATTTTGCAAGAAAATCTTTTCTTTACGTTATTTTCCTTAAAATC
61 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATC
* * * * * *
622833 AAAGTTCATC-CTTTAA-ACAAACCAAGCTTCG-ATT
124 AAAGTTCGTCTCTTAAATAC-GA-CAAACAT-GAATA
* * * * * * *
622867 CTCATAAT-AGCCCCATTCTTTTTAAGATTGGGAAGTGA-AAACAAATTC-CCTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAG-CATAAACACAGTCTCCTT-ATTAGGATA
* * * * *
622929 CATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCAAA
* *
622994 GTTTGTCTTTTAAATACGACAAACATGAATA
127 GTTCGTCTCTTAAATACGACAAACATGAATA
* ** * * **
623025 CTCATACTAATCCCTGTTCTTTTTAGGATTGGGAAGCATAAACACAGTCTTTTTATTAGGATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * * * **
623090 TCATATTGATGCTTTGGTTTCGCAAG-AAAGACTTTTTTTTTCACACCAATTTTTGCAAAGTCTT
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAG-C-TTTTCTTTC-C-CCCATTTTT-TAAAATCAA
* * * *
623154 AGTTTGTGC-CTCT-AATGA-GATAAACATGGATT
126 AGTTCGT-CTCT-TAAAT-ACGACAAACATGAATA
***** * * * * *
623186 CT-ATCAA-AGATTTTTTTTCATTTTT-TGAATAGGTA-C-TATACACAATTCTCCTCT-TTAGG
1 CTCAT-AATA-ATCCCCATTC-TTTTTAGGATTAGGCAGCATAAACAC-AGTCTCCT-TATTAGG
* * ** * * * ** * ***
623245 ATAAATGATATTGATGATTTTATTTTGCATGGAAATATTTTCTTTACGTTATTTTCCTTAAAATC
61 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATC
* * * * *
623310 AAAGTTCATC-CTTTAA-ACAAACCAAGCTTCG-ATA
124 AAAGTTCGTCTCTTAAATAC-GA-CAAACAT-GAATA
** * * * *
623344 CTCATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCA-AACACACATTC-CCTTTATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAA-ACACAGTCTCC-TTATTAGGATA
* * ** * * *
623407 CATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATCAAA
*
623472 GTTTGTCTCTTAAATACGACAAACATGAATA
127 GTTCGTCTCTTAAATACGACAAACATGAATA
* * * * ** * * *
623503 CTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACGTAGTCTTCTCACTAGGATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * * * * ** * *
623568 TCATATTGACGCTTTGATTTCGCAGGAAAGGC-TTT-TTTCCTACCAATTGTCGTAAAGTCTAAG
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC--CCCATT-TTTTAAAATCAAAG
* ** * * *
623631 TTTGTGACTCAAATGA-GACAAACATGGATT
128 TTCGTCTCTTAAAT-ACGACAAACATGAATA
* ** * * * *
623661 CT-AGTAATGATCTTCATTC-TTTTGGGCATTAGGCA-CTATAAACACATTCTCCTCAATAGGGA
1 CTCA-TAATAATCCCCATTCTTTTTAGG-ATTAGGCAGC-ATAAACACAGTCTCCTTATTA-GGA
* * * * * *
623723 -AAATGACATTGATGCTTTGGGGTT-GCAAGAAAAGCTTTTCTTTCACCCGTTTTTGATAGAATC
62 TACATGATATTGATGCTTT-GGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATC
* * *
623786 AAAGTTTGTCTCTTAAATATGACAAGCATGAATA
124 AAAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * * * * * * *
623820 CTCATACTAATCCCCACTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTCGAAAACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
** * * * * * *
623885 CCATAATGATGCCTTGGCTTT-GAAAGAAAGGC-TTT-TTTCCCGCCAATTTTTATAAAGTCTAA
66 TGATATTGATGCTTTGG-TTTCGCAAGAAAAGCTTTTCTTTCCC-CC-ATTTTT-TAAAATCAAA
* * * * *
623947 GTTCATGC-CTCAAATGA-GACAAACGTGGATT
127 GTTCGT-CTCTTAAAT-ACGACAAACATGAATA
* ** * * * * * * * *
623978 CT-AGTGAA-GATCTTCGTTCATTTTATGATTAGGTA-CTATAAACACATTTTGCTCATTAGGAT
1 CTCA-T-AATAATCCCCATTCTTTTTAGGATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT
* * ** * * * * * ** *
624040 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTATTTATCCTATTTTTCTTAAAATCAA
63 ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCA-TTTT-TTAAAATCAA
* * * * *
624105 AGTTCATC-CTTTAAATAAGGCAAGCATCG-ATT
126 AGTTCGTCTC-TTAAATACGACAAACAT-GAATA
* * * * ** * * *
624137 CTCATAACT-GTCTCCATTCTTTTCAAGATT-GAAAAGCAAAAACACA-T-TCCTTTCATCAGGC
1 CTCATAA-TAATCCCCATTCTTTTTAGGATTAG-GCAGCATAAACACAGTCTCC-TT-ATTAGGA
* * * * * *
624198 TGCATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGACAAAATCA
62 TACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCA
* *
624263 AAGTTTGTCTCTTAAATACGACAAACAAGAATA
125 AAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * *
624296 C-CGATAATAATCCTCGTT-TTTTTCTGTATTAGGTA-CAATAAACATAGTCTTCTTATTAGGAT
1 CTC-ATAATAATCCCCATTCTTTTT-AGGATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT
* * * *
624358 ACACGATATT-ATGCTTTCGTTTCGCAAGAAAGGC-TTTC-TTCCCCCAAATTTTTATAAAGTCT
63 ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCC--ATTTTT-TAAAATC-
* * * *
624420 AAA-TTCGTGC-CTCAAATAAGACAAACATGGATT
124 AAAGTTCGT-CTCTTAAATACGACAAACATGAATA
* * *** * * * ** *
624453 CT-AGTAGTGATCTTTATTC-ATTTAGTGATTTGGCA-CTATAAACACATTCTCCGCATAAGGAT
1 CTCA-TAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT
* * ** * * * * ** *
624515 AAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAA
63 ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATCAA
** * ** *
624580 AGTTTATCAT-TTAAATA-TAGCAGGCATCG-ATT
126 AGTTCGTC-TCTTAAATACGA-CAAACAT-GAATA
* * * * *** * *
624612 CTCATAATAGTCTCTATTCTTTTTAAGATTGAAAAAGCAAAAACACATTC-CCTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATT-AGGCAGCATAAACACAGTCTCCTT-ATTAGGATA
* * * * * * *
624676 CATGACATTGATGCTTTGGTGTCGTAAGGAAAGCTTTTCTTTCCACCATTTTCGATAGAATCAAA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATCAAA
* * * *
624741 GTTTGTGTCTTAAATATGACAAACTTGAATA
127 GTTCGTCTCTTAAATACGACAAACATGAATA
* *
624772 CTCATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACATAGTC-CTCTTATTAGGATAC
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTC-CTTATTAGGATAC
* * * * * * *
624836 ACGATATT-ATGCTTTGGTCTCGCAAGAAAGGC-TTTCATCCCCCCAATTTTTATAAAGTCTAAG
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCC-ATTTTT-TAAAATCAAAG
* * * * * *
624899 TTCGTGC-CTCAAATAAGGCAAATATGGATT
128 TTCGT-CTCTTAAATACGACAAACATGAATA
* *** * * * * * * *
624929 CT-AGTAATGATCTTTATTC-ATTTAGTAATTTGGCA-CAATAAACACATTCTCCTCATAAGGAG
1 CTCA-TAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT
* * ** * * * * ** *
624991 AAATGATATTGATGATTTTCTTTTC-TATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCA
63 ACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAATCA
* * * * * * *
625055 AAGTTCATCTTTTAAATATGGCAAGCATCAATT
125 AAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * * *
625088 CTTATAATAGTCTCCATTCTTTTTAAGATTTGGAAGCAAAAACACA-TC-CTTTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTC-CTT-ATTAGGATA
* * * ** * * * *
625151 CATGACATTGATGCTTTAGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATGAAA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCAAA
* *
625216 GTAT-GCCTTTTAAATACGACAAACATGAATA
127 GT-TCGTCTCTTAAATACGACAAACATGAATA
* * * * ** * *
625247 CTCATACTAATCCCCGTTCTTCTCT-GGACTAGGCAGCATAAACTTAGTCTTCTCATTAGGATAC
1 CTCATAATAATCCCCATTCTT-TTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATAC
* * * ** * *
625311 ATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTAATTTTAGTAAAAATTAA
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-C-CCCATTTT--TTAAAATCAA
* * *
625376 A-TTCGTGC-CTCAAATTA-GACAAACATGGATT
126 AGTTCGT-CTCTTAAA-TACGACAAACATGAATA
* **** * * * * **
625407 CT-AGTAAAAATCTTTGTTCATTTT-GTGATTAGGTA-CTATAAACACATTCTGCTCCTTAGGAT
1 CTCA-TAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT
* * * ** * * * * * **
625469 AAAAGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCTTATTTTTCTTAAAATCAA
63 ACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCA-TTTT-TTAAAATCAA
* * * * *
625534 AGTTCAT-TCTTTAAATAGGGCAAGCATCG-ATT
126 AGTTCGTCTC-TTAAATACGACAAACAT-GAATA
* * * * * * * * * *
625566 CTCGTAACAGTCTCCATT-TTTTCAAGATTTGG-ATGCCA-AAACACATTC-CCTTCATTCGGGT
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCA-G-CATAAACACAGTCTCCTT-ATTAGGAT
* * * * * * *
625627 AAATGACATTGACGCTGTGGGGTT-GCAAGAAAACCTTTTCTTTCACCCATTTTTTATAGAATCA
63 ACATGATATTGATGCT-TTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTA-A-AATCA
* * *
625691 ATGTTTGTCTCTTAAATATGACAAACATGAATA
125 AAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * ** * * * * * *
625724 CTCACACTAGTCCCCATTCTTTTCAAGATTACACACCATAAACATAGTCTTCTCA-CACGAATAC
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTA-GGATAC
* * * * * * *
625788 ATCATAATGATGCTTTGGTTTTGTAAG-AAAGGTTTT-TTTCCCACCAATTTTTGTAAAGTCTAA
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCC-CC-ATTTTT-TAAAATCAAA
* * *
625851 GTTCGTGC-CTCAAATGA-GAC-AA-ATAAAGA
127 GTTCGT-CTCTTAAAT-ACGACAAACATGAATA
* ** * * * * * * *
625880 TTCTAGTAA-AGATCTTCGTTCATTTT-GTGATTAGGTA-CTATAAACACATTTTGCTCCA-TAG
1 CTC-A-TAATA-ATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCT-TATTAG
* * * ** * * * * ** *
625941 GATAAATGGTATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAAT
60 GATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAAT
* * * * * * *
626006 CAAAGTTCATCTTTTAAATATGGCAAGCATCAATT
123 CAAAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * * * * *
626041 CTCATAATAGTCTCCATTCTTTTGAAGATTGGGAAGAAAAAACACATTC-CCTTCATAAGGATAC
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTT-ATTAGGATAC
* * ** * *
626105 ATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATGAAAG
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCAAAG
*
626170 TAT-G-CCCTTTAAATACGACAAACATGAATA
128 T-TCGTCTC-TTAAATACGACAAACATGAATA
* * * * *
626200 CTCATACTAATCCCCGTTCTTTTCT-GGATTAGGCAGCATAAACATAGTCTTCTCATTAGGATAC
1 CTCATAATAATCCCCATTCTTTT-TAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATAC
* * * ** * * *
626264 ATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTAATTTTAGTAAAGTCTAA
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-C-CCCATTTT-TTAAAATCAAA
* *
626329 GTTCGTGC-CTCAAATGA-GACAAACATGGAT-
127 GTTCGT-CTCTTAAAT-ACGACAAACATGAATA
* * * * ** * * * * *
626359 TTTAGAAAAGATCTTCATTCATTTT-GTGAGTAGGTA-CTATAAACACATTCTCCTCT-TCAGGA
1 CTCATAATA-ATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCT-TATTAGGA
* * * ** * * * * * * * *
626421 TAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTGTCCTTAAAATTA
62 TACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATT-T-TTTAAAATCA
* * * *
626486 AAGTTCATCTTTTAAATACGACAAGCATCG-ATT
125 AAGTTCGTCTCTTAAATACGACAAACAT-GAATA
* * * * * * * *
626519 CTCATAATAGTCTCCATTCTTTTTAAGATTTGGAAACGA-AAACATATTC-CCTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGC-ATAAACACAGTCTCCTT-ATTAGGATA
* * * * ** *
626582 CAAGACATTGATGCTTTGGTGTT-GTAAGAAAAGCTTTTTTTTCCCCTGTTTTTGACAGAATCAA
64 CATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTA-A-AATCAA
** * *
626646 AGTTTATCTCTTATATACAACAAACATGAATA
126 AGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * *
626678 CTCATACTAATCCCCATT-TTTTTGAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATAG
1 CTCATAATAATCCCCATTCTTTTT-AGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATAC
** * * * *
626742 ACAATATTAATGCTTTGGTTGCACAAGAAAGGC-TTTCTTTCCCCCAATTTTTATAAAGA-CTAA
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCC-ATTTTT-TAAA-ATC-AA
* * *
626805 A-TTCGTAC-CTCAAATTA-GACAAACATGGATT
126 AGTTCGT-CTCTTAAA-TACGACAAACATGAATA
* **** * * * **
626836 CT-AGTAAAAATCTTTGTTCATTTT-GTGATTAGGTA-CTATAAACACA-TGCTGCTCCTTAGGA
1 CTCA-TAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGT-CTCCTTATTAGGA
* * * ** * * * * * *
626897 TAAAAGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCA
62 TACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCA-TTTT-TTAAAATCA
* * * * ** *
626962 AAGTTCAT-TCTTTAAATAAGCCAAGCATCTATT
125 AAGTTCGTCTC-TTAAATACGACAAACATGAATA
* * * * * * * * *
626995 CTCGTAACAGTCTCCATT-TTTTCAAGATTTGG-ATGCCA-AAACACATTC-CCTTCATTCTGG-
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCA-G-CATAAACACAGTCTCCTT-ATT-AGGA
* * * * *
627055 TAAATGACATTGATGCTGTGGGGTT-GCAAGAAAAGCTTTTCTTTCACCCATTTTTTATAGAATC
62 TACATGATATTGATGCT-TTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTA-A-AATC
* * * *
627119 AATGTTTGTCTCTTAACTATGACAAACATGAATA
124 AAAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * * * * * *
627153 CACACACTAGTCCCCATTCTTTTCAAGATTAGACACCATAAACACAGTCTTCTCA-TACGAATAC
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTA-GGATAC
* * * * * * *
627217 ATCATAATGATGCTTTGGTTTTGTAAG-AAAGGTTTT-TTTCCCACCAATTTTTGTAAAGTCTAA
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCC-CC-ATTTTT-TAAAATCAAA
* * *
627280 GTTCGTGC-CTCAAATGA-GAC-AA-ATAAAGA
127 GTTCGT-CTCTTAAAT-ACGACAAACATGAATA
* ** * * * * * * *
627309 TTCTAGTAA-AGATCTTCGTTCATTTT-GTGATTAGGTA-CTATAAACACATTTTTCTCCA-TAG
1 CTC-A-TAATA-ATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCT-TATTAG
* * * ** * * * * * *
627370 GATAAATGGTATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCCCTC-TTTTCCTTAAAA
60 GATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT-TCCCCCATTTT--TTAAAA
* * * * * * *
627434 TCAAAGTTCATCTTTTAAATATGGCAAGCATCAATT
122 TCAAAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * * * *
627470 CTCATAATAGTCTCCATTCTTTTGAAGATTGGGAAGAAAAAACACATTC-CCTTCATTAGGATAC
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTT-ATTAGGATAC
* * * ** * *
627534 ATGACATTGATGCCTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAG
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCAAAG
*
627599 TAT-G-CCCTTTAAATACGACAAACATGAATA
128 T-TCGTCTC-TTAAATACGACAAACATGAATA
* * * ** * * *
627629 CTCATACTAATCCCCGTTCTTCTCCGGATTAGGCAGCATAAACATAGTCTTCTCATTAGGATACA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
* * * ** * * * *
627694 TCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTAATTTTAGTAAAGTCTATG
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-C-CCCATTTT-TTAAAATCAAAG
* *
627759 TTCGTGC-CTCAAATGA-GACAAACAT-AGATT
128 TTCGT-CTCTTAAAT-ACGACAAACATGA-ATA
* * ** * * * * *
627789 CT-AGAAAAGATCTTCATTCATTTT-GTGAGTAGGTA-CTATAAACACATTCTCCTCT-TCAGGA
1 CTCATAATA-ATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCT-TATTAGGA
* * * ** * * * * * * *
627850 TAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTCGCCCTATTGTCCTTAAAATT
62 TACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-CCCCATT-T-TTTAAAATC
* * * *
627914 AAAGTTCATCTTTTAAATACGACAAGCATCGACT-
124 AAAGTTCGTCTCTTAAATACGACAAACAT-GAATA
* * * * * * * * *
627948 CTCATAATAGTCTCCATTCTTCTTAAGATTTGGAAACGA-AAACATATTC-CCTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGC-ATAAACACAGTCTCCTT-ATTAGGATA
* * * * * *
628011 CAAGACATTGATGCTTTGGTGTT-GTAAGAAAAGCTTTTTTTTCCCCCGTTTTTGACAGAATCAA
64 CATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTA-A-AATCAA
** *
628075 AGTTTATCTCTTAAATACAACAAACATGAATA
126 AGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * *
628107 CTCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATAGT
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATA--
* * * * * *
628172 CA--ATGTTAATGCTTTGGCTGCACAAGAAAGGC-TTTC-TTCCCCCTAATTTTTATAAAGAAT-
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCC--ATTTTT-T-AA-AATC
* * *
628232 AAA-TTCGTGC-CTCAAATGA-GACAAACATGGATT
124 AAAGTTCGT-CTCTTAAAT-ACGACAAACATGAATA
* **** * * * * **
628265 CT-AGTAAAAATCTTTGTTCATTTT-GTGATTAGGTA-CTATAAACACATTCTGCTCCTTAGGAT
1 CTCA-TAATAATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCTTATTAGGAT
* * * ** * * * * **
628327 AAAAGATATTGATGATTTTATATT-GCATGGAAATCTTTTCTTTACCTTATTTTTCTTAAAATCA
63 ACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCCCCA-TTTT-TTAAAATCA
* * * *
628391 AAGTTCAT-TCTTCAAATA-AAGCAAGCATCG-ATT
125 AAGTTCGTCTCTT-AAATACGA-CAAACAT-GAATA
* * * * * * * * * *
628424 CTCGTAACAGTCTCCATT-TTTTCAAGATTTGG-ATGCCA-AAACACATTC-CCTTCATTCGGGT
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCA-G-CATAAACACAGTCTCCTT-ATTAGGAT
* * * * * **
628485 AAATGACATTGATGCTGTGGGGTT-GCAAGAAAAGCTTTTCTTTCACCTGTTTTTTATAGAATCA
63 ACATGATATTGATGCT-TTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTA-A-AATCA
* *
628549 AAGTTTGTCTCTTAAATATGACAAACATGAATA
125 AAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * * * * *
628582 CTCACACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCA-TACGAATAC
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTA-GGATAC
* * * ** * * *
628646 ATCATAATGATGCTTTGGTTTTGTGAG-AAAGGTTTT-TTTCCCACCAATTTTTGTAAAGTCTAA
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCC-CC-ATTTTT-TAAAATCAAA
* * *
628709 GTTCGTGC-CTCAAATGA-GAC-AA-ATAAAGA
127 GTTCGT-CTCTTAAAT-ACGACAAACATGAATA
* ** * * * * * * *
628738 TTCTAGTAA-AGATCTTCGTTCATTTT-GTGATTAGGTA-CTATAAACACATTTTGCTCCA-TAG
1 CTC-A-TAATA-ATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCT-TATTAG
* * * ** * * * * ** *
628799 GATAAATGGTATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAAT
60 GATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTT--TTAAAAT
*
628864 CAAAGTTC--ATCTT---T----C--A-AT---T-
123 CAAAGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * * * *
628883 CTCATAATAGTCTCCATTCTTTTGAAGATTGGGAAGAAAAAACACA-TTTCCTTCATTAGGATAC
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTT-ATTAGGATAC
* * ** * * * *
628947 ATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATGAAAG
65 ATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTT--TAAAATCAAAG
* *
629012 TAT-GCCCCTTAAATACGACAAACATGAATA
128 T-TCGTCTCTTAAATACGACAAACATGAATA
* * * * *
629042 CTCATACTAATCCCCGTTCTTCTCTT--GATTAGGCAGCATAAACATAGTCTTCTCATTAGGATA
1 CTCATAATAATCCCCATTCTT-T-TTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATA
* * * ** * * *
629105 CATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTAATTTTAGTAAAGTCTA
64 CATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-C-CCCATTTT-TTAAAATCAA
* *
629170 AGTTCGTGC-CTCAAATGA-GACAAACAT-AGATT
126 AGTTCGT-CTCTTAAAT-ACGACAAACATGA-ATA
* * ** * * * * * *
629202 CT-AGAAAAGATCTTCATTCATTTT-GTGAGTAGGTA-CTATAAACACATTCTCCTCT-TCAAGA
1 CTCATAATA-ATCCCCATTCTTTTTAG-GATTAGGCAGC-ATAAACACAGTCTCCT-TATTAGGA
* * * ** * * * * * * *
629263 TAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTCGCCCTATTGTCCTTAAAATT
62 TACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-CCCCATT-T-TTTAAAATC
* * * * * *
629327 AAAGTTCATCT-TTGGAATATGGCAAGCATCG-ATT
124 AAAGTTCGTCTCTT-AAATACGACAAACAT-GAATA
* * * * * * *
629361 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAACGA-AAACACATTC-CCTTCATTAGGATA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGC-ATAAACACAGTCTCCTT-ATTAGGATA
* * * * * *
629424 CAAGACATTGATGCTTTGGTGTT-GTAAGAAAAGCTTTTTTTTCCCCCGTTTTTGACAGAATCAA
64 CATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTA-A-AATCAA
** *
629488 AGTTTATCTCTTAAATACAACAAACATGAATA
126 AGTTCGTCTCTTAAATACGACAAACATGAATA
* * * * * * *
629520 CTCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATAGA
1 CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
** * * * *
629585 CAATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTCTTCCCCCCAATTTTTA
66 TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTA
629637 TAAAGTCTAA
Statistics
Matches: 7412, Mismatches: 2316, Indels: 1361
0.67 0.21 0.12
Matches are distributed among these distances:
141 1 0.00
142 6 0.00
143 79 0.01
144 3 0.00
145 5 0.00
147 5 0.00
148 33 0.00
149 68 0.01
150 4 0.00
152 3 0.00
153 2 0.00
154 2 0.00
155 6 0.00
156 70 0.01
157 594 0.08
158 1951 0.26
159 3539 0.48
160 844 0.11
161 156 0.02
162 35 0.00
163 6 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (157 bp):
CTCATAATAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACACAGTCTCCTTATTAGGATACA
TGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCCCCATTTTTTAAAATCAAAGTTC
GTCTCTTAAATACGACAAACATGAATA
Found at i:623801 original size:317 final size:317
Alignment explanation
Indices: 623400--624053 Score: 841
Period size: 317 Copynumber: 2.1 Consensus size: 317
623390 TTCCCTTTAT
* * *
623400 TAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAA
1 TAGGATAAATGAAATTGATGCTTTGGGGTCACAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAA
** *
623465 AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGG
66 AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCACTCTTTTCAAG
* * * * * * * * *
623530 ATTAGGCACCATAAACGTAGTCTTCTCACTAGGATACATCATATTGACG-CTTTGATTTCGCAGG
131 ATTAGACACCATAAACATAGTCTTCTCACTAGAAAACACCATAATGACGCCTTGGATTT-GAAAG
* * **
623594 AAAGGCTTTTTTCCTACCAATTGTCGTAAAGTCTAAGTTTGTGACTCAAATGAGACAAACATGGA
195 AAAGGCTTTTTTCCCACCAATTGTCATAAAGTCTAAGTTCATGACTCAAATGAGACAAACATGGA
*
623659 TTCTAGT-AATGATCTTCATTC-TTTTGGGCATTAGGCACTATAAACACATTCTCCTCAA
260 TTCTAGTGAA-GATCTTCATTCATTTTAGG-ATTAGGCACTATAAACACATTCTCCTCAA
* ** *
623717 TAGGGA-AAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTCTTT-CACCCGTTTTTGAT
1 TA-GGATAAATGAAATTGATGCTTTGGGGTCACAAGAAAAGCTTTTCTTTCCA-CCGTTTTCGAT
* * *
623780 AGAATCAAAGTTTGTCTCTTAAATATGACAAGCATGAATACTCATACTAATCCCCACTCTTTTCA
64 AAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCACTCTTTTCA
* * * *
623845 AGATTAGACACCATAAACATAGTCTTCTCATTCGAAAACACCATAATGATGCCTTGGCTTTGAAA
129 AGATTAGACACCATAAACATAGTCTTCTCACTAGAAAACACCATAATGACGCCTTGGATTTGAAA
* * * * *
623910 GAAAGGCTTTTTTCCCGCCAATTTTTATAAAGTCTAAGTTCATGCCTCAAATGAGACAAACGTGG
194 GAAAGGCTTTTTTCCCACCAATTGTCATAAAGTCTAAGTTCATGACTCAAATGAGACAAACATGG
* * * * * *
623975 ATTCTAGTGAAGATCTTCGTTCATTTTATGATTAGGTACTATAAACACATTTTGCTCAT
259 ATTCTAGTGAAGATCTTCATTCATTTTAGGATTAGGCACTATAAACACATTCTCCTCAA
*
624034 TAGGATAAATGATATTGATG
1 TAGGATAAATGAAATTGATG
624054 ATTTTATTTT
Statistics
Matches: 288, Mismatches: 43, Indels: 12
0.84 0.13 0.03
Matches are distributed among these distances:
316 5 0.02
317 266 0.92
318 17 0.06
ACGTcount: A:0.31, C:0.19, G:0.16, T:0.34
Consensus pattern (317 bp):
TAGGATAAATGAAATTGATGCTTTGGGGTCACAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAA
AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCACTCTTTTCAAG
ATTAGACACCATAAACATAGTCTTCTCACTAGAAAACACCATAATGACGCCTTGGATTTGAAAGA
AAGGCTTTTTTCCCACCAATTGTCATAAAGTCTAAGTTCATGACTCAAATGAGACAAACATGGAT
TCTAGTGAAGATCTTCATTCATTTTAGGATTAGGCACTATAAACACATTCTCCTCAA
Found at i:624121 original size:317 final size:317
Alignment explanation
Indices: 623432--624166 Score: 788
Period size: 317 Copynumber: 2.3 Consensus size: 317
623422 TTGGTGTCAT
* * * *
623432 AAGAAAAGCTTTTCTTTC-CACC-GTTTTCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAA
1 AAGAAAAGCTTTTATTTCAC-CCATTTTTC-ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAG
* * * *
623495 CATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACGTAGTCTTCTCACT
64 CATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCACT
* * * * * * * * *
623560 AGGATACATCATATTGACGCTTTGATTTCGCAGGAAAGGCTTTTTTCCTACCAATTGTCGTAAAG
129 AGAAAACACCATAATGACGCTTGGATTTCGAAAGAAAGGCTTTTTTCCCACCAATTGTCATAAAG
** *
623625 TCTAAGTTTGTGACTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTGGGCAT
194 TCTAAGTTCATGACTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTAGGCAT
* *
623690 TAGGCACTATAAACACATTCTCCTCAATAGGGAAAATGACATTGATGCTTTGGGGTTGC
259 TAGGCACTATAAACACATTCTCCTCAATAGGGAAAATGACATTGATGATTTGAGGTTGC
* * * * *
623749 AAGAAAAGCTTTTCTTTCACCCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAGCA
1 AAGAAAAGCTTTTATTTCACCCATTTTTCATAAAATCAAAGTTTGTCTCTTAAATAAGACAAGCA
* * *
623814 TGAATACTCATACTAATCCCCACTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTCG
66 TGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCACTAG
* * * * *
623879 AAAACACCATAATGATGCCTTGGCTTT-GAAAGAAAGGCTTTTTTCCCGCCAATTTTTATAAAGT
131 AAAACACCATAATGACG-CTTGGATTTCGAAAGAAAGGCTTTTTTCCCACCAATTGTCATAAAGT
* * * *
623943 CTAAGTTCATGCCTCAAATGAGACAAACGTGGATTCTAGTGAA-GATCTTCGTTCATTTTATG-A
195 CTAAGTTCATGACTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTCATTC-TTTTAGGCA
* * * * * * **
624006 TTAGGTACTATAAACACATTTTGCTCATTA-GGATAAATGATATTGATGATTTTATTTTGC
258 TTAGGCACTATAAACACATTCTCCTCAATAGGGA-AAATGACATTGATGATTTGAGGTTGC
* * * * * ** *
624066 ATGGAAATCTTTTATTT-ATCCTATTTTTCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAG
1 AAGAAAAGCTTTTATTTCA-CCCATTTTTCATAAAATCAAAGTTTGTCTC-TTAAATAAGACAAG
* * *
624129 CATCG-ATTCTCATAACT-GTCTCCATTCTTTTCAAGATT
64 CAT-GAATACTCAT-ACTAATCCCCATTCTTTTCAAGATT
624167 GAAAAGCAAA
Statistics
Matches: 348, Mismatches: 60, Indels: 20
0.81 0.14 0.05
Matches are distributed among these distances:
316 5 0.01
317 320 0.92
318 23 0.07
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (317 bp):
AAGAAAAGCTTTTATTTCACCCATTTTTCATAAAATCAAAGTTTGTCTCTTAAATAAGACAAGCA
TGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCACTAG
AAAACACCATAATGACGCTTGGATTTCGAAAGAAAGGCTTTTTTCCCACCAATTGTCATAAAGTC
TAAGTTCATGACTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTAGGCATTA
GGCACTATAAACACATTCTCCTCAATAGGGAAAATGACATTGATGATTTGAGGTTGC
Found at i:624896 original size:476 final size:477
Alignment explanation
Indices: 623700--629672 Score: 7360
Period size: 476 Copynumber: 12.6 Consensus size: 477
623690 TAGGCACTAT
* * * *
623700 AAACACATTCTCC-TCAATAGGGA-AAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTC
1 AAACACATTC-CCTTCATTA-GGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTC
* *
623763 TTT-CACCCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAGCATGAATACTCATAC
64 TTTCCA-CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATAC
* * * * * * * * *
623827 TAATCCCCACTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTCGAAAACACCATAAT
128 TAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATT
* * * *
623892 GATGCCTTGGCTTT-GAAAGAAAGGCTTTTTTCCCGCCAATTTTTATAAAGTCTAAGTTCATGCC
193 GATGCTTTGG-TTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCC
* * *
623956 TCAAATGAGACAAACGTGGATTCTAGTGAAGATCTTCGTTCATTTTATGATTAGGTACTATAAAC
257 TCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAAC
* * * *
624021 ACATTTTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTATTTA-T
322 ACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTT-CTTAGC
* * *
624085 CCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACT-GTC
386 CCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAA-TAGTC
* **
624149 TCCATTCTTTTCAAGA-TTGAAAAGCAA
450 TCCATTCTTTTTAAGATTTGGGAAGCAA
* * * * *
624176 AAACACATTCCTTTCATCAGGCTGCATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * * * *
624241 TCCACCATTTTTGACAAAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATAC-CGATAATA
66 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTC-ATACTA
* * * * * * *
624305 ATCCTCGTT-TTTTTCTGTATTAGGTACAATAAACATAGTCTTCTTATTAGGATACA-CGATATT
130 ATCCCCATTCTTTTT-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATC-ATATT
* * *
624368 -ATGCTTTCGTTTCGCAAGAAAGGCTTTCTTCCC-CCAAATTTTTATAAAGTCTAAATTCGTGCC
193 GATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACC-AATTTTTATAAAGTCTAAGTTCGTGCC
* ** ** * * *
624431 TCAAATAAGACAAACATGGATTCTAGTAGTGATCTTTATTCATTTAGTGATTTGGCACTATAAAC
257 TCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAAC
* * *
624496 ACATTCTCCGCATAAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCC
322 ACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCC
* * * *
624561 CTATTTTCCTTAAAATCAAAGTTTATCATTTAAATATAGCAGGCATCGATTCTCATAATAGTCTC
387 CTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTCTC
* **
624626 TATTCTTTTTAAGA-TTGAAAAAGCAA
452 CATTCTTTTTAAGATTTG-GGAAGCAA
* *
624652 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGGAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * * * *
624717 TCCACCATTTTCGATAGAATCAAAGTTTGTGTCTTAAATATGACAAACTTGAATACTCATACTAA
66 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAA
* * *
624782 TCCCCATTCTTTTTAGGATTAGGCAGCATAAACATAGTCCTCTTATTAGGATACA-CGATATT-A
131 TCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATC-ATATTGA
* ** *
624845 TGCTTTGGTCTCGCAAGAAAGGCTTTCATCCCCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCA
195 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCCTCA
* * * * ** * * * * *
624910 AATAAGGCAAATATGGATTCTAGTAATGATCTTTATTCATTTAGTAATTTGGCACAATAAACACA
260 AATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACACA
* * *
624975 TTCTCCTCATAAGGAGAAATGATATTGATGATTTTCTTTT-CTATGGAAATCTTTTCTTAGCCCT
325 TTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAAATCTTTTCTTAGCCCT
* *
625039 ATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCAATTCTTATAATAGTCTCCA
389 ATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTCTCCA
625104 TTCTTTTTAAGATTT-GGAAGCAA
454 TTCTTTTTAAGATTTGGGAAGCAA
* * **
625127 AAACACA-TCCTTTTCATTAGGATACATGACATTGATGCTTTAGTGTCATAAGAAAAGCTTTTCT
1 AAACACATTCC-CTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCT
* * * *
625191 TTCCACCGTTTTTGATAGAATGAAAGTATGCCTTTTAAATACGACAAACATGAATACTCATACTA
65 TTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTA
* * * * *
625256 ATCCCCGTTCTTCTCT-GGACTAGGCAGCATAAACTTAGTCTTCTCATTAGGATACATCATATTG
130 ATCCCCATTCTT-TTTAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTG
* * * *
625320 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTAA-TTTTAGTAAAAAT-TAAATTCGTG
194 ATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTA-T-AAAGTCTAAGTTCGTG
* * *
625383 CCTCAAATTAGACAAACATGGATTCTAGTAAAAATCTTTGTTCATTTTGTGATTAGGTACTATAA
255 CCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAA
* * *
625448 ACACATTCTGCTCCTTAGGATAAAAGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTA
320 ACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTC-TTA
* * * * *
625513 -CCTTATTTTTCTTAAAATCAAAGTTCAT-TCTTTAAATAGGGCAAGCATCGATTCTCGTAACAG
384 GCCCTATTTTCCTTAAAATCAAAGTTCATCT-TTTAAATATGGCAAGCATCGATTCTCATAATAG
* * *
625576 TCTCCATT-TTTTCAAGATTT-GGATGCCA
448 TCTCCATTCTTTTTAAGATTTGGGAAGCAA
* * * * * * * *
625604 AAACACATTCCCTTCATTCGGGTAAATGACATTGACGCTGTGGGGTTGCAAGAAAACCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * * * *
625669 T-CACCCATTTTTTATAGAATCAATGTTTGTCTCTTAAATATGACAAACATGAATACTCACACTA
66 TCCA-CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTA
* * * ** * * *
625733 GTCCCCATTCTTTTCAAGATTACACACCATAAACATAGTCTTCTCA-CACGAATACATCATAATG
130 ATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATTA-GGATACATCATATTG
* * * *
625797 ATGCTTTGGTTTTGTAAGAAAGGTTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTC
194 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCCTC
* **
625862 AAATGAGACAAATAAAGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACAC
259 AAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACAC
* * *
625927 ATTTTGCTCCA-TAGGATAAATGGTATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCCC
324 ATTCTCCT-CATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCCC
*
625991 TATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCAATTCTCATAATAGTCTCC
388 TATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTCTCC
* *
626056 ATTCTTTTGAAGA-TTGGGAAGAAA
453 ATTCTTTTTAAGATTTGGGAAGCAA
* **
626080 AAACACATTCCCTTCATAAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * * * *
626145 TCCACCATTTTTGATAAAATGAAAGTATG-CCCTTTAAATACGACAAACATGAATACTCATACTA
66 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTC-TTAAATACGACAAACATGAATACTCATACTA
* *
626209 ATCCCCGTTCTTTTCT-GGATTAGGCAGCATAAACATAGTCTTCTCATTAGGATACATCATATTG
130 ATCCCCATTCTTTT-TAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTG
* *
626273 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTAA-TTTTAGTAAAGTCTAAGTTCGTGC
194 ATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTA-TAAAGTCTAAGTTCGTGC
* * * *
626337 CTCAAATGAGACAAACATGGATTTTAGAAAAGATCTTCATTCATTTTGTGAGTAGGTACTATAAA
256 CTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAA
* * *
626402 CACATTCTCCTC-TTCAGGATAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTG
321 CACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAG
* * * *
626466 CCCTATTGTCCTTAAAATTAAAGTTCATCTTTTAAATACGACAAGCATCGATTCTCATAATAGTC
385 CCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTC
* *
626531 TCCATTCTTTTTAAGATTT-GGAAACGA
450 TCCATTCTTTTTAAGATTTGGGAAGCAA
* * *
626558 AAACATATTCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * * *
626623 TCC-CCTGTTTTTGACAGAATCAAAGTTTATCTCTTATATACAACAAACATGAATACTCATACTA
66 TCCACC-GTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTA
* * *
626687 ATCCCCATT-TTTTTGAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATAGA-CAATATT
130 ATCCCCATTCTTTTT-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATC-ATATT
* * * * * *
626750 AATGCTTTGGTTGCACAAGAAAGGCTTTCTTTCCC-CCAATTTTTATAAAGACTAAATTCGTACC
193 GATGCTTTGGTTTCGCAAGAAAGGCTTT-TTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCC
* * *
626814 TCAAATTAGACAAACATGGATTCTAGTAAAAATCTTTGTTCATTTTGTGATTAGGTACTATAAAC
257 TCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAAC
* * * *
626879 ACATGCTGCTCCTTAGGATAAAAGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTA-C
322 ACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTC-TTAGC
* * * * * *
626943 CCTATTTTTCTTAAAATCAAAGTTCAT-TCTTTAAATAAGCCAAGCATCTATTCTCGTAACAGTC
386 CCTATTTTCCTTAAAATCAAAGTTCATCT-TTTAAATATGGCAAGCATCGATTCTCATAATAGTC
* * *
627007 TCCATT-TTTTCAAGATTT-GGATGCCA
450 TCCATTCTTTTTAAGATTTGGGAAGCAA
* * * * *
627033 AAACACATTCCCTTCATTCTGG-TAAATGACATTGATGCTGTGGGGTTGCAAGAAAAGCTTTTCT
1 AAACACATTCCCTTCATT-AGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCT
* * * * * * *
627097 TT-CACCCATTTTTTATAGAATCAATGTTTGTCTCTTAACTATGACAAACATGAATACACACACT
65 TTCCA-CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACT
* * * * * * *
627161 AGTCCCCATTCTTTTCAAGATTAGACACCATAAACACAGTCTTCTCA-TACGAATACATCATAAT
129 AATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATTA-GGATACATCATATT
* * * *
627225 GATGCTTTGGTTTTGTAAGAAAGGTTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCT
193 GATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCCT
* **
627290 CAAATGAGACAAATAAAGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACA
258 CAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACA
* * *
627355 CATTTTTCTCCA-TAGGATAAATGGTATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCC
323 CATTCTCCT-CATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCC
* *
627419 CTCTTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCAATTCTCATAATAGTCTC
387 CTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTCTC
* *
627484 CATTCTTTTGAAGA-TTGGGAAGAAA
452 CATTCTTTTTAAGATTTGGGAAGCAA
* **
627509 AAACACATTCCCTTCATTAGGATACATGACATTGATGCCTTGGTGTCATAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * *
627574 TCCACCATTTTTGATAGAATCAAAGTATG-CCCTTTAAATACGACAAACATGAATACTCATACTA
66 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTC-TTAAATACGACAAACATGAATACTCATACTA
* * ** *
627638 ATCCCCGTTCTTCTCCGGATTAGGCAGCATAAACATAGTCTTCTCATTAGGATACATCATATTGA
130 ATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGA
* * *
627703 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTAA-TTTTAGTAAAGTCTATGTTCGTGCC
195 TGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTA-TAAAGTCTAAGTTCGTGCC
* * * *
627767 TCAAATGAGACAAACATAGATTCTAGAAAAGATCTTCATTCATTTTGTGAGTAGGTACTATAAAC
257 TCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAAC
* * *
627832 ACATTCTCCTC-TTCAGGATAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCGC
322 ACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGC
* * * * *
627896 CCTATTGTCCTTAAAATTAAAGTTCATCTTTTAAATACGACAAGCATCGACTCTCATAATAGTCT
386 CCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTCT
* * *
627961 CCATTCTTCTTAAGATTT-GGAAACGA
451 CCATTCTTTTTAAGATTTGGGAAGCAA
* * *
627987 AAACATATTCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * * *
628052 TCCCCCGTTTTTGACAGAATCAAAGTTTATCTCTTAAATACAACAAACATGAATACTCATACTAA
66 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAA
* * * * * *
628117 TCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATA-GTCAATGTTAA
131 TCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATC-ATATTGA
* * * * ** *
628181 TGCTTTGGCTGCACAAGAAAGGCTTTCTTCCC-CCTAATTTTTATAAAGAATAAATTCGTGCCTC
195 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACC-AATTTTTATAAAGTCTAAGTTCGTGCCTC
* *
628245 AAATGAGACAAACATGGATTCTAGTAAAAATCTTTGTTCATTTTGTGATTAGGTACTATAAACAC
259 AAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACAC
* * * * *
628310 ATTCTGCTCCTTAGGATAAAAGATATTGATGATTTTATATTGCATGGAAATCTTTTCTTTA-CCT
324 ATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTC-TTAGCCC
* * ** * *
628374 TATTTTTCTTAAAATCAAAGTTCAT-TCTTCAAATAAAGCAAGCATCGATTCTCGTAACAGTCTC
388 TATTTTCCTTAAAATCAAAGTTCATCT-TTTAAATATGGCAAGCATCGATTCTCATAATAGTCTC
* * *
628438 CATT-TTTTCAAGATTT-GGATGCCA
452 CATTCTTTTTAAGATTTGGGAAGCAA
* * * * * *
628462 AAACACATTCCCTTCATTCGGGTAAATGACATTGATGCTGTGGGGTTGCAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * *
628527 T-CACCTGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCACACTA
66 TCCACC-GTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTA
* * * * *
628591 ATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCA-TACGAATACATCATAATG
130 ATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATTA-GGATACATCATATTG
* ** * *
628655 ATGCTTTGGTTTTGTGAGAAAGGTTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTC
194 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCCTC
* **
628720 AAATGAGACAAATAAAGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACAC
259 AAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACAC
* * *
628785 ATTTTGCTCCA-TAGGATAAATGGTATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCCC
324 ATTCTCCT-CATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCCC
628849 TATTTTCCTTAAAATCAAAGTTCATC---T---T-T------CA---ATTCTCATAATAGTCTCC
388 TATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTCTCC
* *
628898 ATTCTTTTGAAGA-TTGGGAAGAAA
453 ATTCTTTTTAAGATTTGGGAAGCAA
* **
628922 AAACACATTTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * * *
628987 TCCACCGTTTTTGATAGAATGAAAGTATGCCCCTTAAATACGACAAACATGAATACTCATACTAA
66 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAA
* *
629052 TCCCCGTTCTTCTCTT--GATTAGGCAGCATAAACATAGTCTTCTCATTAGGATACATCATATTG
131 TCCCCATTCTT-T-TTAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTG
* *
629115 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTAA-TTTTAGTAAAGTCTAAGTTCGTGC
194 ATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTA-TAAAGTCTAAGTTCGTGC
* * * *
629179 CTCAAATGAGACAAACATAGATTCTAGAAAAGATCTTCATTCATTTTGTGAGTAGGTACTATAAA
256 CTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAA
* * * *
629244 CACATTCTCCTC-TTCAAGATAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCG
321 CACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAG
* * **
629308 CCCTATTGTCCTTAAAATTAAAGTTCATCTTTGGAATATGGCAAGCATCGATTCTCATAATAGTC
385 CCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTC
* *
629373 TCCATTCTTTTTAAGA-TTGGGAAACGA
450 TCCATTCTTTTTAAGATTTGGGAAGCAA
* *
629400 AAACACATTCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
* * * *
629465 TCCCCCGTTTTTGACAGAATCAAAGTTTATCTCTTAAATACAACAAACATGAATACTCATACTAA
66 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAA
* * * *
629530 TCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATAGA-CAATATTGA
131 TCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATC-ATATTGA
* * * *
629594 TGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAATTCGTGCCTCA
195 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCCTCA
629659 AATGAGACAAACAT
260 AATGAGACAAACAT
629673 TCTGCTCCTT
Statistics
Matches: 4730, Mismatches: 642, Indels: 250
0.84 0.11 0.04
Matches are distributed among these distances:
459 21 0.00
460 192 0.04
461 13 0.00
462 173 0.04
468 1 0.00
469 2 0.00
474 39 0.01
475 1361 0.29
476 1426 0.30
477 262 0.06
478 1224 0.26
479 16 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (477 bp):
AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTT
TCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAA
TCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGAT
GCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCCTCAA
ATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACACAT
TCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTAGCCCTAT
TTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTCTCCATT
CTTTTTAAGATTTGGGAAGCAA
Found at i:630035 original size:424 final size:424
Alignment explanation
Indices: 629261--630096 Score: 1329
Period size: 424 Copynumber: 2.0 Consensus size: 424
629251 TCCTCTTCAA
* * *
629261 GATAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCGCCCTATTGTCCTTAAAAT
1 GATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTCACCCTATTGTCCTTAAAAT
* * * * *
629326 TAAAGTTCATCTTTGGAATATGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGATT
66 CAAAGTTCATCTTTGAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATT
* * *
629391 GGGAAACGAAAACACATTCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTTGTAAGAAAA
131 GGGAAACCAAAACACATTCCCTTCATTAGGATACAAGACATTGATGCTTTGGGGTTGCAAGAAAA
* * *
629456 GCTTTTTTTTCCCCCGTTTTTGACAGAATCAAAGTTTATCTCTTAAATACAACAAACATGAATAC
196 GCTTTTCTTTCACCCGTTTTTAACAGAATCAAAGTTTATCTCTTAAATACAACAAACATGAATAC
629521 TCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATAGAC
261 TCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATAGAC
* *
629586 AATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAATTC
326 AATATTGATGCTTTGGTTGCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGCCTAAATTC
629651 GTGCCTCAAATGAGACAAACATTCTGCTCCTTAG
391 GTGCCTCAAATGAGACAAACATTCTGCTCCTTAG
* * * *
629685 GATAAATGATATTGATGATTTTATTTTGCGTGGAAATCTTTTCTTTACCCTATTTTTCTTAAAAT
1 GATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTCACCCTATTGTCCTTAAAAT
* *
629750 CAAAGTTCATCCTTT-AAATAAGGCAAGCATCGATTCTCGTAACAGTTTCCATTCTTTTCAAGAT
66 CAAAGTTCAT-CTTTGAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* ** *
629814 TTGGATGCCAAAACACATTCCCTTCATTACGG-TA-AATGACATTGATGCTTTGGGGTTGCAAGG
130 TGGGAAACCAAAACACATTCCCTTCATTA-GGATACAA-GACATTGATGCTTTGGGGTTGCAAGA
* * **
629877 AAAGCTTTTCTTTCACCCGTTTTTAATAGAATCAAAGTTTGTCTCTTAAATATGACAAACAT-AA
193 AAAGCTTTTCTTTCACCCGTTTTTAACAGAATCAAAGTTTATCTCTTAAATACAACAAACATGAA
*
629941 TTACTCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTTGGAT
258 -TACTCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGAT
630006 AGACAATATTGATGCTTTGGTTGCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGCCTAA
322 AGACAATATTGATGCTTTGGTTGCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGCCTAA
630071 ATTCGTGCCTCAAATGAGACAAACAT
387 ATTCGTGCCTCAAATGAGACAAACAT
630097 GGATTCTAGT
Statistics
Matches: 377, Mismatches: 31, Indels: 8
0.91 0.07 0.02
Matches are distributed among these distances:
423 4 0.01
424 367 0.97
425 6 0.02
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (424 bp):
GATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTCACCCTATTGTCCTTAAAAT
CAAAGTTCATCTTTGAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATT
GGGAAACCAAAACACATTCCCTTCATTAGGATACAAGACATTGATGCTTTGGGGTTGCAAGAAAA
GCTTTTCTTTCACCCGTTTTTAACAGAATCAAAGTTTATCTCTTAAATACAACAAACATGAATAC
TCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATAGAC
AATATTGATGCTTTGGTTGCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGCCTAAATTC
GTGCCTCAAATGAGACAAACATTCTGCTCCTTAG
Found at i:630463 original size:159 final size:157
Alignment explanation
Indices: 629798--630463 Score: 360
Period size: 159 Copynumber: 4.2 Consensus size: 157
629788 GTAACAGTTT
* *
629798 CCATTCTTTTCAAGATTTGGATGCCA-AAACACATTCCCTTCATTACGG-TAAATGACATTGATG
1 CCATTCTTTTCAAGA-TTAGAAG-CATAAACACATTCCCTTCATT-CGGATAAATGACATTGATG
* * * *
629861 CTTTGGGGTTGCAAGGAAAGCTTTTCTTTCACCCGTTTTTAATAGAATCAAAGTTTGTCTCTTAA
63 CTTTGGGGTTGAAAGAAAAGCTTTTCTTTCACCCGTTTTTTATAGAATCAAAGTTCGTC-CTTAA
629926 ATATGACAAACAT-AATTACTCATACTAATCC
127 ATATGACAAACATGAA-TACTCATACTAATCC
* * * * * * * * * * ** *
629957 CCATTTTTTTTAGGATTAGGTACCATAAACATAGTCTTCTT-ATTTGGATAGACAATATTGATGC
1 CCATTCTTTTCAAGATTA-GAAGCATAAACACATTC-CCTTCATTCGGATAAATGACATTGATGC
* * * ** *
630021 TTT--GGTTGCACAAGAAAGGC-TTTCTTCCCCCCAATTTTTATA-AAGCCTAAA-TTCGTGCCT
64 TTTGGGGTTG-A-AAGAAAAGCTTTTCTTTCACCCGTTTTTTATAGAA-TC-AAAGTTCGT-CCT
* * * * * *
630081 CAAATGA-GACAAACATGGATTCT-AGTAATGATCT
124 TAAAT-ATGACAAACATGAATACTCA-TACTAATCC
* * ** * * ** * * *
630115 TCGTTCATTTT-GTGACTAGGTA-CTATAAACACATTCTGTTCCTTAGGATAAATGATATTGATG
1 CCATTC-TTTTCAAGATTA-GAAGC-ATAAACACATTCCCTTCATTCGGATAAATGACATTGATG
* **** * * * * * * *
630178 ATTTTATTTTGCATGGAAATCTTTTCTTT-ACCC-TATTTTTCTTAAAATCAAAGTTCATCCTTT
63 CTTTGGGGTTGAAAGAAAAGCTTTTCTTTCACCCGT-TTTTT-ATAGAATCAAAGTTCGTCC-TT
** * * * * * * *
630241 AAGCAAGGCAAGCATCG-ATTCTCGTAAC-AGTCT
125 AAATATGACAAACAT-GAATACTCAT-ACTAATCC
* * * *
630274 CCATTATTTTCAAGATTTGGATGCCA-AAACACATTCCCTTCATTCGGGTAAATGACATTGATGC
1 CCATTCTTTTCAAGA-TTAGAAG-CATAAACACATTCCCTTCATTCGGATAAATGACATTGATGC
*
630338 TTTGGGGTTGAAAGAAAAGCTTTTCTTTCACCCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAA
64 TTTGGGGTTGAAAGAAAAGCTTTTCTTTCACCCGTTTTTTATAGAATCAAAGTTCGTC-CTTAAA
630403 TATGACAAACATGAATACTCATACTAATCC
128 TATGACAAACATGAATACTCATACTAATCC
630433 CCATTCTTTTCAAGATTAGACAGCATAAACA
1 CCATTCTTTTCAAGATTAGA-AGCATAAACA
630464 TAGTCTTCTC
Statistics
Matches: 361, Mismatches: 108, Indels: 76
0.66 0.20 0.14
Matches are distributed among these distances:
157 12 0.03
158 125 0.35
159 200 0.55
160 22 0.06
161 2 0.01
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (157 bp):
CCATTCTTTTCAAGATTAGAAGCATAAACACATTCCCTTCATTCGGATAAATGACATTGATGCTT
TGGGGTTGAAAGAAAAGCTTTTCTTTCACCCGTTTTTTATAGAATCAAAGTTCGTCCTTAAATAT
GACAAACATGAATACTCATACTAATCC
Found at i:630561 original size:476 final size:476
Alignment explanation
Indices: 629669--631526 Score: 2502
Period size: 476 Copynumber: 3.9 Consensus size: 476
629659 AATGAGACAA
*
629669 ACATTCTGCTCCTTAGGATAAATGATATTGATGATTTTATTTTGCGTGGAAATCTTTTCTTTACC
1 ACATTCTGCTCCTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACC
* * *
629734 CTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAACAGTTTC
66 CTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTC
*
629799 CATTCTTTTCAAGATTTGGATGCCAAAACACATTCCCTTCATTACGG-TAAATGACATTGATGCT
131 CATTCTTTTCAAGATTTGGAAGCCAAAACACATTCCCTTCATTA-GGATAAATGACATTGATGCT
* * *
629863 TTGGGGTTGCAAGGAAAGCTTTTCTTT-CACCCGTTTTTAATAGAATCAAAGTTTGTCTCTTAAA
195 TTGGGGTTGAAAGAAAAGCTTTTCTTTCCA-CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAA
* * * *
629927 TATGACAAACAT-AATTACTCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAG
259 TACGACAAACATGAA-TACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAG
* * * * * * *
629991 TCTTCTTATTTGGATAGACAATATTGATGCTTTGGTTGCACAAGAAAGGCTTTCTTCCCCCCAAT
323 TCTTCTCATTAGGATACACAATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTTCCACCAAT
* * * *
630056 TTTTATAAAGCCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCGTTC
388 TTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATAGATTCTAGTAAAGATCTTCATTC
630121 ATTTTGTGACTAGGTACTATAAAC
453 ATTTTGTGACTAGGTACTATAAAC
*
630145 ACATTCTGTTCCTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACC
1 ACATTCTGCTCCTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACC
* ** *
630210 CTATTTTTCTTAAAATCAAAGTTCATCCTTTAAGCAAGGCAAGCATCGATTCTCGTAACAGTCTC
66 CTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTC
* * * *
630275 CATTATTTTCAAGATTTGGATGCCAAAACACATTCCCTTCATTCGGGTAAATGACATTGATGCTT
131 CATTCTTTTCAAGATTTGGAAGCCAAAACACATTCCCTTCATTAGGATAAATGACATTGATGCTT
*
630340 TGGGGTTGAAAGAAAAGCTTTTCTTT-CACCCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAAT
196 TGGGGTTGAAAGAAAAGCTTTTCTTTCCA-CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
* * * *
630404 ATGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACAGCATAAACATAGTC
260 ACGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * ** **
630469 TTCTCATTCGAATACATC-ATAACGATGCTTTGGTTTTGCAAGAAAGG-TTTTTTTCCTACCAAT
325 TTCTCATTAGGATACA-CAATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTTCC-ACCAAT
** * *
630532 TTTGGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAAAGATTCTAGTAAAGATCTTCATTC
388 TTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATAGATTCTAGTAAAGATCTTCATTC
* * * *
630597 ACTTTGTGATTAGCTATTATAAAC
453 ATTTTGTGACTAGGTACTATAAAC
* * *
630621 ACATTATGCTCCATAGGATAAATGGTATTGATGATTTTATTTTGCATGGAAATCTTTTC-TTAGC
1 ACATTCTGCTCCTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTA-C
* * *
630685 CCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAA-AATGGCAAGCATCGACTCTCATAATAGTC
65 CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAA-GGCAAGCATCGATTCTCATAACAGTC
* * * * *
630749 TCCATTCTTTTTAAGATTAGGAAGCAAAAACACGTTCCCTTCATTAGGATACATGACATTGATGC
129 TCCATTCTTTTCAAGATTTGGAAGCCAAAACACATTCCCTTCATTAGGATAAATGACATTGATGC
* * * * * * *
630814 TTTGGTG-TCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATGATAGTATGCCTTTTAA
194 TTTGGGGTTGA-AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA
* *
630878 ATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCAGCATAAACATAG
258 ATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAG
* * *
630943 TCTTCTCATTAGGATACATC-ATATTGATGCTTTGGTTTCACCAGAAAGGGTTTTTTTTCACACT
323 TCTTCTCATTAGGATACA-CAATATTGATGCTTTGGTTTCACAAGAAA-GGCTTTTTTTC-CACC
* * *
631007 AA-TTTTAGTAAAGTCTAAGTTGGTGCCTCAAATGAGACAAACATAGATTCTAGAAAAGATCTTC
385 AATTTTTA-TAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATAGATTCTAGTAAAGATCTTC
*
631071 ATTCATTTTGTGAGTAGGTACTATAAAC
449 ATTCATTTTGTGACTAGGTACTATAAAC
* * * **
631099 ACATTCTCCTCTTTAGGATAAACTG-TATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCGC
1 ACATTCTGCTCCTTAGGATAAA-TGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTAC
** * * * **
631163 CCTATTGCCCTTAAAATTAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAGTAGTCT
65 CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCT
* * * * *
631228 CCATTCTTTTTAAGATTGGGAAACGAAAGCACATTCCCTTCATTAGGATACAA-GACATTGATGC
130 CCATTCTTTTCAAGATTTGGAAGCCAAAACACATTCCCTTCATTAGGATA-AATGACATTGATGC
* * * * * *
631292 TTTGGTGTTGTAAGAAAAGCTTTTCTTTCCACCATTTTTGACAGAATCAAAGTTTATCTCCTAAA
194 TTTGGGGTTGAAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAA
* * *
631357 TACGACAAACATGAATACTCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGT
259 TACGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * *
631422 CTTCTTATTAGGATAGACAATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCTCC-CCAAT
324 CTTCTCATTAGGATACACAATATTGATGCTTTGGTTTCACAAGAAAGGCTTT-TTTTCCACCAAT
*
631486 TTTTATAAAGTCTAAATTCGTGCCTTAAATGAGACAAACAT
388 TTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACAT
631527 TCTGCTCCTT
Statistics
Matches: 1230, Mismatches: 132, Indels: 40
0.88 0.09 0.03
Matches are distributed among these distances:
475 16 0.01
476 774 0.63
477 22 0.02
478 411 0.33
479 7 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (476 bp):
ACATTCTGCTCCTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACC
CTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTC
CATTCTTTTCAAGATTTGGAAGCCAAAACACATTCCCTTCATTAGGATAAATGACATTGATGCTT
TGGGGTTGAAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATA
CGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCT
TCTCATTAGGATACACAATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTTCCACCAATTTT
TATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATAGATTCTAGTAAAGATCTTCATTCATT
TTGTGACTAGGTACTATAAAC
Found at i:631891 original size:424 final size:424
Alignment explanation
Indices: 631099--631948 Score: 1154
Period size: 424 Copynumber: 2.0 Consensus size: 424
631089 TACTATAAAC
* * *
631099 ACATTCTCCTCTTTAGGATAAACTGTATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTCGCC
1 ACATTCTCCTCCTTAGGATAAACTGTATTGATGATTTTATTTTGCATGGAAATCTTTTCTTCACC
* * * **
631164 CTATTGCCCTTAAAATTAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCATAGTAGTCTC
66 CTATTGCCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTC
* * *
631229 CATTCTTTTTAAGATTGGGAAACGAAAGCACATTCCCTTCATTAGGATACAAGACATTGATGCTT
131 CATTCTTTTCAAGATTGGGAAACCAAAACACATTCCCTTCATTAGGATACAAGACATTGATGCTT
* * *
631294 TGGTGTTGTAAGAAAAGCTTTTCTTTCCACCATTTTTGACAGAATCAAAGTTTATCTCCTAAATA
196 TGGGGTTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGACAGAATCAAAGTTCATCTCCTAAATA
* * * **
631359 CGACAAACATGAATACTCATACTAATCCCCATTTTTTTTAGGATTAGGTACCATAAACATAGTCT
261 CGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGTCT
* * * *
631424 TCTTATTAGGATAGACAATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCTCC-CCAATTT
326 TCTCATTAGGATACACAATAATCATGCTTTGGTTTCACAAGAAAGGCTTTCTTC-CCACCAATTT
* *
631488 TTATAAAGTCTAAATTCGTGCCTTAAATGAGACAA
390 TGATAAAGTCTAAATTCGTGCCTCAAATGAGACAA
* * *
631523 ACATTCTGCTCCTTAGGATAAA-TGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTAT
1 ACATTCTCCTCCTTAGGATAAACTG-TATTGATGATTTTATTTTGCATGGAAATCTTTTCTTCAC
*** * *
631587 CCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGGTTCTCGTAACAGTCT
65 CCTATTGCCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCT
* ** * *
631652 CCATTCTTTTCAAGATTTGGATGCCAAAACACATTTCCTTCATTAGGGTA-AATGACATTGATGC
130 CCATTCTTTTCAAGATTGGGAAACCAAAACACATTCCCTTCATTAGGATACAA-GACATTGATGC
* * *
631716 TTTGGGGTTGCAAGAAAAGCTTTTCTTT-CACCCGTTTTTGATAGAATCAAAGTTCGTCTCCTAA
194 TTTGGGGTTGCAAGAAAAGCTTTTCTTTCCA-CCATTTTTGACAGAATCAAAGTTCATCTCCTAA
* *
631780 ATATGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACAGCATAAACATAG
258 ATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAG
* ** * *
631845 TCTTCTCATT-CGAGTACATC-ATAATCATGCTTTGGTTTTGCAAGAAAGGTTTTTTTCCCACCA
323 TCTTCTCATTAGGA-TACA-CAATAATCATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCA
* *
631908 ATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAA
386 ATTTTGATAAAGTCTAAATTCGTGCCTCAAATGAGACAA
631947 AC
1 AC
631949 TAAAATTCTA
Statistics
Matches: 370, Mismatches: 50, Indels: 12
0.86 0.12 0.03
Matches are distributed among these distances:
423 10 0.03
424 359 0.97
425 1 0.00
ACGTcount: A:0.30, C:0.19, G:0.14, T:0.36
Consensus pattern (424 bp):
ACATTCTCCTCCTTAGGATAAACTGTATTGATGATTTTATTTTGCATGGAAATCTTTTCTTCACC
CTATTGCCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTC
CATTCTTTTCAAGATTGGGAAACCAAAACACATTCCCTTCATTAGGATACAAGACATTGATGCTT
TGGGGTTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGACAGAATCAAAGTTCATCTCCTAAATA
CGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGTCT
TCTCATTAGGATACACAATAATCATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTT
GATAAAGTCTAAATTCGTGCCTCAAATGAGACAA
Found at i:637155 original size:41 final size:42
Alignment explanation
Indices: 637089--637191 Score: 172
Period size: 41 Copynumber: 2.5 Consensus size: 42
637079 TTCTTCTCTC
* * *
637089 CTCCTCCTGTCATCCCTCCTCTCTCTATTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
637131 CTCCTCCTATC-TCCCTCCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
637172 CTCCTCCTATCATCCCTCCT
1 CTCCTCCTATCATCCCTCCT
637192 CTCTTTTCTT
Statistics
Matches: 57, Mismatches: 3, Indels: 2
0.92 0.05 0.03
Matches are distributed among these distances:
41 39 0.68
42 18 0.32
ACGTcount: A:0.09, C:0.48, G:0.03, T:0.41
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
Found at i:637172 original size:9 final size:9
Alignment explanation
Indices: 637134--637176 Score: 50
Period size: 9 Copynumber: 4.6 Consensus size: 9
637124 CCTGTCTCTC
637134 CTCCTATCT
1 CTCCTATCT
637143 CCCTCCTATCT
1 --CTCCTATCT
*
637154 CTACTATCT
1 CTCCTATCT
*
637163 CTCCTGTCT
1 CTCCTATCT
637172 CTCCT
1 CTCCT
637177 CCTATCATCC
Statistics
Matches: 29, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
9 20 0.69
11 9 0.31
ACGTcount: A:0.09, C:0.47, G:0.02, T:0.42
Consensus pattern (9 bp):
CTCCTATCT
Found at i:640453 original size:159 final size:156
Alignment explanation
Indices: 638828--640954 Score: 681
Period size: 159 Copynumber: 13.4 Consensus size: 156
638818 CATTCCCTTC
* * * * ** * *
638828 ATTAAGATACATGACATTGATGCTCTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTTAT
* * * * * *
638893 AGAATGAAAGTATG-CCTTTTAAATATGACAAACATGAATACTCAAACTAATCCTCGTTCTTTTC
66 A-AATCAAAGTTTGTCC--TTAAATA-GACAAACATGAATTCTCATACTAATCCCCATTCTTTT-
* * *
638957 T-GGATTAGGCAGC-ATAAACATAGTCTTCTC
126 TAGGATTAGGTAGCTATAAACACA-TCTTCTT
* * * * *
638987 ATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACTA-ATTTTA
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-CACCATTTTTTA
* * * * ** ** *
639051 GTACAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT-AGATTCT-A-AAAAGATCTTCATTCAT
65 -TA-AATCAAAGTTTGT-CCTTAAAT-AGACAAACATGA-ATTCTCATACTA-ATCCCCATTCTT
* *
639113 TTT-GTGAGTAGGTA-CTATAAACACATTCTCCTCT
124 TTTAG-GATTAGGTAGCTATAAACACA-TCTTCT-T
* * * * ** * * * * * *
639147 -TCAGGATAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTCGC-CTTATTATCC
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-CAC-CATT-T-T
* ** * * * * * * *
639209 TTA-AAATTAAAGTTCATCTTTTAAATATGGCAAGCATCG-ATTCTCATAATAGTCTCCATTTTT
62 TTATAAATCAAAGTTTGTC-CTTAAATA-GACAAACAT-GAATTCTCATACTAATCCCCATTCTT
* * * * * *
639272 TTTAAGATTGGGAAACGA-AAACACAT-TCCCTT
124 TTTAGGATTAGGTAGCTATAAACACATCT-TCTT
* * * * * * *
639304 CATTAGGATACAAGACATTGATTCTTTGGTGTT-GTAAGAAAAGCTTTTCATTCCACCGTTTTTG
1 -ATTAGGATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTT
* * * * *
639368 ACAAAATCAAAGTTTATCTCTTAAATACGACAAACAGGAATACTAATACTAATCCCCATTCTTTT
64 A-TAAATCAAAGTTTGTC-CTTAAATA-GACAAACATGAATTCTCATACTAATCCCCATTCTTTT
*
639433 TAGGATTAGGTACAGC-ATAAACATAGTCTTCTT
126 TAGGATTAGGT--AGCTATAAACACA-TCTTCTT
* * ** * * * * *
639466 TTTAGGATAGACAATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTCTTCCCCCCAATTTTTAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTTAT
* * * * * ** * *
639530 AAAGTCTAAA-TTCGTGCCTCAAATGAGACAAACATGGATTCT-AGTAATGATCTTCGTTCATTT
66 AAA-TC-AAAGTTTGT-CCTTAAAT-AGACAAACATGAATTCTCA-TACTAATCCCCATTCTTTT
* * *
639593 T-GTGATTGGGTA-CTATAAACACATTCTGCTC
126 TAG-GATTAGGTAGCTATAAACACA-TCTTCTT
* * * ** * * * *
639624 CTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTT--ACCATATTTTTC
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCAT-TTTTT-
* ** * * * * *
639687 TTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCG-ATTCTCGTAAC-AGTCTCCATTCTT
64 AT-AAATCAAAGTTTGTCC-TTAAAT-AGACAAACAT-GAATTCTCAT-ACTAATCCCCATTCTT
* * * * *
639750 TTCAAGATTTGG-ATGCCA-AAACACAT-TCCCTT
124 TTTAGGATTAGGTA-GCTATAAACACATCT-TCTT
* * * * *
639782 CATTAGGGTAAATGACATTGATGCTTTGGGGTT-GCAAGAAAAGCTTTTCTTT-CACCCGTTTTT
1 -ATTAGGATACATGATATTGATGCTTT-GGTTTCGCAAGAAAAGCTTTTCTTTCCA-CCATTTTT
* * *
639845 TATAGAATCAAAGTTTCT-CTTAAATATGACAAACATGAATACACATACTAATCCCCATTCTTTT
63 TATA-AATCAAAGTTTGTCCTTAAATA-GACAAACATGAATTCTCATACTAATCCCCATTCTTTT
* * ** * * * *
639909 CAAGATTAGACA-CCATAAATATAGTCTTCTC
126 TAGGATTAGGTAGCTATAAACACA-TCTTCTT
* * * * * * *
639940 ATTCGAATACATCATAATGATGCTTTGGTTTCGCAAG-AAAGGTTTT-TTCCCACCAATTTTTAT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTTAT
* * * ** ** **** *
640003 AAAGACTAAA-TTCGTGCCTCAAATGAGACAAACATGGTTTCT-AGTAAAAATCTTTGTTCATTT
66 AAA-TC-AAAGTTTGT-CCTTAAAT-AGACAAACATGAATTCTCA-TACTAATCCCCATTCTTTT
* *
640066 T-GTGATTAGGTA-CTATAAACACATTCTGCTC
126 TAG-GATTAGGTAGCTATAAACACA-TCTTCTT
* * * * ** * ** * * *
640097 CTTAGGATAAAAGATATTGATGATTTTATTTTGCGTGGAAATCTTTTCTTTGCC-CTATTTTCCT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT--T
* ** * * * * * * *
640161 T-CAAATCAAAGTTAATCCTTTAAATAAGGCAAGCCTCG-ATTCTCGTAATAGTCTCCATTCTTT
63 TATAAATCAAAGTTTGTCC-TTAAAT-AGACAAACAT-GAATTCTCATACTAATCCCCATTCTTT
* * * * * **
640224 TTAAGATTGGGAAGCGA-AAACACACCCCCTT
125 TTAGGATTAGGTAGCTATAAACACATCTTCTT
* * * * *
640255 CATTAAGATACATGACATTAATGCTTTGGTGTT-GTAAGAAAAGCTTTTCATTCCACCATTTTTT
1 -ATTAGGATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTT
* * *
640319 ATAGAATCAAAGTTTGTCTCTTAAATACGGCAAACATGAATACTCATACTAATCCCCGTTCTTTT
64 ATA-AATCAAAGTTTGTC-CTTAAATA-GACAAACATGAATTCTCATACTAATCCCCATTCTTTT
* * * *
640384 TAGGATTAGGCATC-ATAAACATAGTGTTCTT
126 TAGGATTAGGTAGCTATAAACACA-TCTTCTT
* * * *
640415 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTG
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-CACCATTTTTTA
* * * * * ****
640480 TAAAGTCTAA-TTTCATGCCTCT-AATGAGATAAACA-CAGATTCT-AGTA-AAGATCTTTTTTC
65 TAAA-TCAAAGTTT-GT-CCT-TAAAT-AGACAAACATGA-ATTCTCA-TACTA-ATCCCCATTC
* * *
640540 ATTTTT-TGAATAGGTA-CTATAAACA-ATTCTCCTCT
122 -TTTTTAGGATTAGGTAGCTATAAACACA-TCTTCT-T
* * * ** * * * * * ***
640575 -TCAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCTT
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT--TT
** * * * * * *
640639 A-AAATCAAAGTTCATCCTTCAAACAAACCAAGCTTCG-ATTCTCATAAT-AGCCCCTATTCTTT
64 ATAAATCAAAGTTTGTCCTT-AAATAGA-CAAACAT-GAATTCTCATACTAATCCCC-ATTCTTT
* * * *
640701 TTAAGATT-GTGAAGCGA-AAACACATC-CCTT
125 TTAGGATTAG-GTAGCTATAAACACATCTTCTT
* * * * * *
640731 CATTAGGATACATGACATTGATGCTATGGTGTCGTAAGAAAAGCTTTTCTTTCCAGCATTTTTGA
1 -ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTTA
* *
640796 TAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTT
65 TA-AATCAAAGTTTGTC-CTTAAATA-GACAAACATGAATTCTCATACTAATCCCCATTCTTTTT
* *
640861 AGGATTAGGTAGC-ATAATCATAGTCTTCTT
127 AGGATTAGGTAGCTATAAACACA-TCTTCTT
* * * *
640891 ATTAGGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TTTCACACCAATTTTTA
1 ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-CACCATTTTTTA
640955 CAAAGTCTTA
Statistics
Matches: 1413, Mismatches: 415, Indels: 280
0.67 0.20 0.13
Matches are distributed among these distances:
154 2 0.00
155 16 0.01
156 29 0.02
157 176 0.12
158 268 0.19
159 661 0.47
160 193 0.14
161 61 0.04
162 6 0.00
163 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (156 bp):
ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTTAT
AAATCAAAGTTTGTCCTTAAATAGACAAACATGAATTCTCATACTAATCCCCATTCTTTTTAGGA
TTAGGTAGCTATAAACACATCTTCTT
Found at i:640700 original size:477 final size:477
Alignment explanation
Indices: 638777--641190 Score: 3249
Period size: 477 Copynumber: 5.1 Consensus size: 477
638767 GTTTTCATCA
* * *
638777 ATAATAGTCTCCATTCCTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAAGATACATGA
1 ATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGATACATGA
* ** * * *
638842 CATTGATGCTCTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATGAAAGTATG
66 CATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCACCGTTTTTGATAGAATCAAAGTTTG
* * * * *
638907 CCTTTTAAATATGACAAACATGAATACTCAAACTAATCCTCGTTCTTTTCT-GGATTAGGCAGCA
131 TCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTT-TAGGATTAGGCAGCA
*
638971 TAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTT
195 TAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTT
* * * * *
639036 TTCACACTAA-TTTTAGTACAGTCTAAGTTCGTGCCTCAAATGAGACAAACATAGATTCTA-AAA
259 TTCACACCAATTTTTA-TAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
** * *
639099 AGATCTTCATTCATTTTGTGAGTAGGTACTATAAACACATTCTCCTCTTCAGGATAAATTATATT
323 AGATCTTTGTTCATTTTGTGAATAGGTACTATAAACACATTCTCCTCTTCAGGATAAATGATATT
* ** * * *
639164 GATGATTTTCTTTTGCATGGAAATCTTTTCTTCGCCTTATTATCCTTAAAATTAAAGTTCATCTT
388 GATGATTTTATTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCT
*
639229 TTAAATATGGCAAGCATCGATTCTC
453 TTAAATAAGGCAAGCATCGATTCTC
* * *
639254 ATAATAGTCTCCATTTTTTTTAAGATTGGGAAACGAAAACACATTCCCTTCATTAGGATACAAGA
1 ATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGATACATGA
* * * *
639319 CATTGATTCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCACCGTTTTTGACAAAATCAAAGTTTA
66 CATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCACCGTTTTTGATAGAATCAAAGTTTG
* * *
639384 TCTCTTAAATACGACAAACAGGAATACTAATACTAATCCCCATTCTTTTTAGGATTAGGTACAGC
131 TCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGG--CAGC
* * *
639449 ATAAACATAGTCTTCTTTTTAGGATAGA-CAATATTGATGCTTTGGTTTCACAAGAAAGGC-TTT
194 ATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT
* * *
639512 CTTCCCCCCAATTTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
258 TTTCACACCAATTTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * *
639577 TGATCTTCGTTCATTTTGTGATTGGGTACTATAAACACATTCTGCTCCTT-AGGATAAATGATAT
323 AGATCTTTGTTCATTTTGTGAATAGGTACTATAAACACATTCTCCT-CTTCAGGATAAATGATAT
* *
639641 TGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCATATTTTTCTTAAAATCAAAGTTCATCC
387 TGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCC
639706 TTTAAATAAGGCAAGCATCGATTCTC
452 TTTAAATAAGGCAAGCATCGATTCTC
* * * * * * * *
639732 GTAACAGTCTCCATTCTTTTCAAGATTTGGATGCCAAAACACATTCCCTTCATTAGGGTAAATGA
1 ATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGATACATGA
* * * *
639797 CATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTC-TTTCACCCGTTTTTTATAGAATCAAAG-TT
66 CATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCA-CCGTTTTTGATAGAATCAAAGTTT
* * * * * * *
639860 -TCTCTTAAATATGACAAACATGAATACACATACTAATCCCCATTCTTTTCAAGATTAGACACCA
130 GTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCA
* * * * *
639924 TAAATATAGTCTTCTCATTCGAATACATCATAATGATGCTTTGGTTTCGCAAGAAAGG--TTTTT
195 TAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTT
* * * *
639987 TCCCACCAATTTTTATAAAGACTAAATTCGTGCCTCAAATGAGACAAACATGGTTTCTAGTAAAA
260 TCACACCAATTTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAG
* * *
640052 ATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTCTGCTCCTT-AGGATAAAAGATATTG
325 ATCTTTGTTCATTTTGTGAATAGGTACTATAAACACATTCTCCT-CTTCAGGATAAATGATATTG
* * * * *
640116 ATGATTTTATTTTGCGTGGAAATCTTTTCTTTGCCCTATTTTCCTTCAAATCAAAGTTAATCCTT
389 ATGATTTTATTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTT
*
640181 TAAATAAGGCAAGCCTCGATTCTC
454 TAAATAAGGCAAGCATCGATTCTC
* ** *
640205 GTAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACACCCCCTTCATTAAGATACATGA
1 ATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGATACATGA
* * *
640270 CATTAATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCACCATTTTTTATAGAATCAAAGTTTG
66 CATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCACCGTTTTTGATAGAATCAAAGTTTG
* *
640335 TCTCTTAAATACGGCAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCATCAT
131 TCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCAT
* *
640400 AAACATAGTGTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTT
196 AAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTT
* * * * * **
640465 TCACACCAATTTTTGTAAAGTCTAATTTCATGCCTCTAATGAGATAAACACAGATTCTAGTAAAG
260 TCACACCAATTTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAG
* *
640530 ATCTTTTTTCATTTTTTGAATAGGTACTATAAACA-ATTCTCCTCTTCAGGATAAATGATATTGA
325 ATCTTTGTTCATTTTGTGAATAGGTACTATAAACACATTCTCCTCTTCAGGATAAATGATATTGA
* *
640594 TGATTTTATTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTC
390 TGATTTTATTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTT
* ** *
640659 AAACAAACCAAGCTTCGATTCTC
455 AAATAAGGCAAGCATCGATTCTC
* *
640682 ATAATAG-CCCCTATTCTTTTTAAGATTGTGAAGCGAAAACACA-TCCCTTCATTAGGATACATG
1 ATAATAGTCTCC-ATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGATACATG
* * * * *
640745 ACATTGATGCTATGGTGTCGTAAGAAAAGCTTTTCTTTCCAGCATTTTTGATAGAATCAAAGTTT
65 ACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCACCGTTTTTGATAGAATCAAAGTTT
*
640810 GTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGTAGCA
130 GTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCA
* *
640875 TAATCATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTT
195 TAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTT
* * * * ** * *
640940 TCACACCAATTTTTACAAAGTCTTAGTTCGTGCCTCTAACAAGATAAACATGGATTCTAGCAAAG
260 TCACACCAATTTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAG
* * * * *
641005 ATTTTTTTTCATTTTTTGAATAGGTGCTATAAACA-ACTCTCCTCTTCAGGATAAATGATATTGA
325 ATCTTTGTTCATTTTGTGAATAGGTACTATAAACACATTCTCCTCTTCAGGATAAATGATATTGA
* *
641069 TGATTTTATTTTGTATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTT
390 TGATTTTATTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTT
* ** ** * *
641134 AAACAAACCAAGTTTTGAGTCTC
455 AAATAAGGCAAGCATCGATTCTC
* * *
641157 ATAATAGCCCCCATTCTTTTTAAGAGTGGGAAGC
1 ATAATAGTCTCCATTCTTTTTAAGATTGGGAAGC
641191 TGATGAAAAC
Statistics
Matches: 1723, Mismatches: 196, Indels: 38
0.88 0.10 0.02
Matches are distributed among these distances:
473 313 0.18
474 58 0.03
475 340 0.20
476 257 0.15
477 356 0.21
478 338 0.20
479 61 0.04
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (477 bp):
ATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACATTCCCTTCATTAGGATACATGA
CATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCACCGTTTTTGATAGAATCAAAGTTTG
TCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCAT
AAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTT
CACACCAATTTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGA
TCTTTGTTCATTTTGTGAATAGGTACTATAAACACATTCTCCTCTTCAGGATAAATGATATTGAT
GATTTTATTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTA
AATAAGGCAAGCATCGATTCTC
Found at i:640886 original size:951 final size:952
Alignment explanation
Indices: 638777--641190 Score: 3276
Period size: 951 Copynumber: 2.5 Consensus size: 952
638767 GTTTTCATCA
* * * * *
638777 ATAATAGTCTCCATTCCTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAAGATACATGA
1 ATAACAGTCCCCATTCTTTTTAAGATTGTGAAGCAAAAACACATTCCCTTCATTAGGATACATGA
* * * *
638842 CATTGATGCTCTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATGAAAGTATG
66 CATTGATGCTATGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTG
* * * *
638907 CCTTTTAAATATGACAAACATGAATACTCAAACTAATCCTCGTTCTTTTCT-GGATTAGGCAGCA
131 TCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTT-TAGGATTAGGCAGCA
*
638971 TAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTT
195 TAATCATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGG--TTTTT
* * *
639036 TTCACACTAA-TTTTAGTACAGTCTAAGTTCGTGCCTCAAATGAGACAAACATAGATTCTA-AAA
258 TTCACACCAATTTTTA-TAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGAAA
* * *
639099 AGATCTTCATTCATTTTGTGAGTAGGTACTATAAACACATTCTCCTCTTCAGGATAAATTATATT
322 A-ATCTTTATTCATTTTGTGAATAGGTACTATAAACACATTCTCCTCTTCAGGATAAATGATATT
* * * * *
639164 GATGATTTTCTTTTGCATGGAAATCTTTTCTTCGCCTTATTATCCTTAAAATTAAAGTTCATCTT
386 GATGATTTTATTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCT
* * *
639229 TTAAATATGGCAAGCATCGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAACGAAAAC
451 TTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAAC
** * * *
639294 ACATTCCCTTCATTAGGATACAAGACATTGATTCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCA
516 ACACCCCCTTCATTAAGATACAAGACATTAATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCA
*
639359 CCGTTTTTGACAAAATCAAAGTTTATCTCTTAAATACGACAAACAGGAATACTAATACTAATCCC
581 CCATTTTTGACAAAATCAAAGTTTATCTCTTAAATACGACAAACAGGAATACTAATACTAATCCC
* *
639424 CATTCTTTTTAGGATTAGGTACAGCATAAACATAGTCTTCTTTTTAGGATAGACAATATTGATGC
646 CATTCTTTTTAGGATTAGG-ACAGCATAAACATAGTCTTCTTATTAGGATACACAATATTGATGC
* * *
639489 TTTGGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAATTCGTGCCTCAAAT
710 TTTGGTTTCACAAGAAAGGCTTTCTTCACACCAATTTTTATAAAGTCTAAATTCATGCCTCAAAT
** * * *
639554 GAGACAAACATGGATTCTAGTAATGATCTTCGTTCATTTTGTGATTGGGTACTATAAACACATTC
775 GAGACAAACACAGATTCTAGTAAAGATCTTCGTTCATTTTGTGAATAGGTACTATAAACACATTC
*
639619 TGCTCCTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCATATTT
840 TCCTCCTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCATATTT
* * * **
639684 TTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTC
905 TCCTTAAAATCAAAGTTCATCCTTCAAACAAACCAAGCATCGATTCTC
* * * * * * *
639732 GTAACAGTCTCCATTCTTTTCAAGATT-TGGATGCCAAAACACATTCCCTTCATTAGGGTAAATG
1 ATAACAGTCCCCATTCTTTTTAAGATTGT-GAAGCAAAAACACATTCCCTTCATTAGGATACATG
* * * * *
639796 ACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTCTTT-CACCCGTTTTTTATAGAATCAAAG-T
65 ACATTGATGCTATGGTGTCGTAAGAAAAGCTTTTCTTTCCA-CCGTTTTTGATAGAATCAAAGTT
* * * * * *
639859 T-TCTCTTAAATATGACAAACATGAATACACATACTAATCCCCATTCTTTTCAAGATTAGACACC
129 TGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGC
* * *
639923 ATAAAT-ATAGTCTTCTCATTCGAATACATCATAATGATGCTTTGGTTTCGCAAGAAAGG-TTTT
194 AT-AATCATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGTTTTT
* * * *
639986 TTCCCACCAATTTTTATAAAGACTAAATTCGTGCCTCAAATGAGACAAACATGGTTTCTAGTAAA
258 TTCACACCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAG-AAA
* * * *
640051 AATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTCTGCTCCTT-AGGATAAAAGATATT
322 AATCTTTATTCATTTTGTGAATAGGTACTATAAACACATTCTCCT-CTTCAGGATAAATGATATT
* * * *
640115 GATGATTTTATTTTGCGTGGAAATCTTTTCTTTGCCCTATTTTCCTTCAAATCAAAGTTAATCCT
386 GATGATTTTATTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCT
* *
640180 TTAAATAAGGCAAGCCTCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAAC
451 TTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAAC
*
640245 ACACCCCCTTCATTAAGATACATGACATTAATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCA
516 ACACCCCCTTCATTAAGATACAAGACATTAATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCA
* * * * * * *
640310 CCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATACGGCAAACATGAATACTCATACTAATCCC
581 CCATTTTTGACAAAATCAAAGTTTATCTCTTAAATACGACAAACAGGAATACTAATACTAATCCC
* * * **
640375 CGTTCTTTTTAGGATTAGG-CATCATAAACATAGTGTTCTTATTAGGATACATGATATTGATGCT
646 CATTCTTTTTAGGATTAGGACAGCATAAACATAGTCTTCTTATTAGGATACACAATATTGATGCT
* * * * *
640439 TTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAAGTCTAATTTCATGCCTCTAA
711 TTGGTTTCACAAGAAAGGC--TTTCTTCACACCAATTTTTATAAAGTCTAAATTCATGCCTCAAA
* ** *
640504 TGAGATAAACACAGATTCTAGTAAAGATCTTTTTTCATTTTTTGAATAGGTACTATAAACA-ATT
774 TGAGACAAACACAGATTCTAGTAAAGATCTTCGTTCATTTTGTGAATAGGTACTATAAACACATT
**
640568 CTCCT-CTTCAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACGTTAT
839 CTCCTCCTT-AGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCATAT
*
640632 TTTCCTTAAAATCAAAGTTCATCCTTCAAACAAACCAAGCTTCGATTCTC
903 TTTCCTTAAAATCAAAGTTCATCCTTCAAACAAACCAAGCATCGATTCTC
* *
640682 ATAATAG-CCCCTATTCTTTTTAAGATTGTGAAGCGAAAACACA-TCCCTTCATTAGGATACATG
1 ATAACAGTCCCC-ATTCTTTTTAAGATTGTGAAGCAAAAACACATTCCCTTCATTAGGATACATG
* *
640745 ACATTGATGCTATGGTGTCGTAAGAAAAGCTTTTCTTTCCAGCATTTTTGATAGAATCAAAGTTT
65 ACATTGATGCTATGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTT
* *
640810 GTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGTAGCA
130 GTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCA
* *
640875 TAATCATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTT
195 TAATCATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGG-TTTTTT
* * * ** * *
640940 TCACACCAATTTTTACAAAGTCTTAGTTCGTGCCTCTAACAAGATAAACATGGATTCTAGCAAAG
259 TCACACCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAG-AAAA
* * * * *
641005 ATTTTTTTTCATTTTTTGAATAGGTGCTATAAACA-ACTCTCCTCTTCAGGATAAATGATATTGA
323 ATCTTTATTCATTTTGTGAATAGGTACTATAAACACATTCTCCTCTTCAGGATAAATGATATTGA
* * *
641069 TGATTTTATTTTGTATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTT
388 TGATTTTATTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTT
* ** ** * * * * *
641134 AAACAAACCAAGTTTTGAGTCTCATAATAGCCCCCATTCTTTTTAAGAGTGGGAAGC
453 AAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGC
641191 TGATGAAAAC
Statistics
Matches: 1267, Mismatches: 172, Indels: 43
0.85 0.12 0.03
Matches are distributed among these distances:
949 133 0.10
950 193 0.15
951 506 0.40
952 133 0.10
953 192 0.15
954 5 0.00
955 105 0.08
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (952 bp):
ATAACAGTCCCCATTCTTTTTAAGATTGTGAAGCAAAAACACATTCCCTTCATTAGGATACATGA
CATTGATGCTATGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTG
TCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCAT
AATCATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGTTTTTTTC
ACACCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGAAAAATC
TTTATTCATTTTGTGAATAGGTACTATAAACACATTCTCCTCTTCAGGATAAATGATATTGATGA
TTTTATTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAA
TAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCGAAAACACACC
CCCTTCATTAAGATACAAGACATTAATGCTTTGGTGTTGTAAGAAAAGCTTTTCATTCCACCATT
TTTGACAAAATCAAAGTTTATCTCTTAAATACGACAAACAGGAATACTAATACTAATCCCCATTC
TTTTTAGGATTAGGACAGCATAAACATAGTCTTCTTATTAGGATACACAATATTGATGCTTTGGT
TTCACAAGAAAGGCTTTCTTCACACCAATTTTTATAAAGTCTAAATTCATGCCTCAAATGAGACA
AACACAGATTCTAGTAAAGATCTTCGTTCATTTTGTGAATAGGTACTATAAACACATTCTCCTCC
TTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCATATTTTCCTTA
AAATCAAAGTTCATCCTTCAAACAAACCAAGCATCGATTCTC
Found at i:648589 original size:12 final size:11
Alignment explanation
Indices: 648567--648642 Score: 52
Period size: 12 Copynumber: 6.9 Consensus size: 11
648557 AGAGAAATAA
*
648567 GAGAGAGGAGG
1 GAGATAGGAGG
648578 GATGATAGGAGG
1 GA-GATAGGAGG
*
648590 AGAGACAGGA--
1 -GAGATAGGAGG
*
648600 GAGATAGTA--
1 GAGATAGGAGG
648609 GAGATAGGAGG
1 GAGATAGGAGG
648620 GATGATAGGAGG
1 GA-GATAGGAGG
*
648632 AGAGACAGGAG
1 -GAGATAGGAG
648643 AGACATGAGA
Statistics
Matches: 53, Mismatches: 6, Indels: 11
0.76 0.09 0.16
Matches are distributed among these distances:
9 15 0.28
11 4 0.08
12 30 0.57
13 4 0.08
ACGTcount: A:0.39, C:0.03, G:0.49, T:0.09
Consensus pattern (11 bp):
GAGATAGGAGG
Found at i:648618 original size:42 final size:42
Alignment explanation
Indices: 648566--648645 Score: 151
Period size: 42 Copynumber: 1.9 Consensus size: 42
648556 AAGAGAAATA
648566 AGAGAGAGGAGGGATGATAGGAGGAGAGACAGGAGAGATAGT
1 AGAGAGAGGAGGGATGATAGGAGGAGAGACAGGAGAGATAGT
*
648608 AGAGATAGGAGGGATGATAGGAGGAGAGACAGGAGAGA
1 AGAGAGAGGAGGGATGATAGGAGGAGAGACAGGAGAGA
648646 CATGAGAGAT
Statistics
Matches: 37, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
42 37 1.00
ACGTcount: A:0.41, C:0.03, G:0.47, T:0.09
Consensus pattern (42 bp):
AGAGAGAGGAGGGATGATAGGAGGAGAGACAGGAGAGATAGT
Found at i:648642 original size:51 final size:51
Alignment explanation
Indices: 648587--648684 Score: 160
Period size: 51 Copynumber: 1.9 Consensus size: 51
648577 GGATGATAGG
* * *
648587 AGGAGAGACAGGAGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGAC
1 AGGAGAGACAGGAGAGATAATAGAGAGAGGAGGGATGACAGGAGGAGAGAC
*
648638 AGGAGAGACATGAGAGATAATAGAGAGAGGAGGGATGACAGGAGGAG
1 AGGAGAGACAGGAGAGATAATAGAGAGAGGAGGGATGACAGGAGGAG
648685 GAGAGAAGAA
Statistics
Matches: 43, Mismatches: 4, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
51 43 1.00
ACGTcount: A:0.42, C:0.04, G:0.45, T:0.09
Consensus pattern (51 bp):
AGGAGAGACAGGAGAGATAATAGAGAGAGGAGGGATGACAGGAGGAGAGAC
Found at i:648654 original size:42 final size:42
Alignment explanation
Indices: 648557--648656 Score: 148
Period size: 42 Copynumber: 2.4 Consensus size: 42
648547 TAGCCCTCAA
* *
648557 AGAGAAATAAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGAAATGAGAGATAGGAGGGATGATAGGAGGAGAGACAGG
*
648599 AGAGATA-GTAGAGATAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGAAATG-AGAGATAGGAGGGATGATAGGAGGAGAGACAGG
*
648641 AGAGACATGAGAGATA
1 AGAGAAATGAGAGATA
648657 ATAGAGAGAG
Statistics
Matches: 52, Mismatches: 4, Indels: 4
0.87 0.07 0.07
Matches are distributed among these distances:
42 51 0.98
43 1 0.02
ACGTcount: A:0.44, C:0.03, G:0.43, T:0.10
Consensus pattern (42 bp):
AGAGAAATGAGAGATAGGAGGGATGATAGGAGGAGAGACAGG
Found at i:655492 original size:476 final size:475
Alignment explanation
Indices: 653646--656660 Score: 3627
Period size: 475 Copynumber: 6.3 Consensus size: 475
653636 TATGATAAAG
* * * * * * *
653646 ATGAATACTCCTACTAATCCCTGTTCTTTTTAAGATTAGGCACCATAAACATAGCCTTGTCATTC
1 ATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * * * * * *
653711 GAACACATCATAATGACGCTTTAGTTTTACAAGAAATGCTTTTTTTCCCACCAAGTTTTGTAAAG
66 GGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTTCCCACCAATTTTTGTAAAG
* * * * * *
653776 CCTAAGTTCATGCCTTAATTGAGACAAACTTGGATTCTAGTAAAGATCTTCGTTCATTTTGTGAT
130 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGAT
* * * *
653841 TAGGTACTATAAACAAATTCTGCTCATTAGGATAAATGATATTTATGA-TTTATTTTGCATGAAA
195 TAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAAA
* *
653905 ATCTTTTCTTTACCCTA-TTTCTCTAAAAATCAAAGTTAATCCTTTAAATAAGGCAAGCATCGAT
260 ATCTTTTCTTTACCCTATTTTC-CTTAAAATCAAAGTTTATCCTTTAAATAAGGCAAGCATCGAT
* * *
653969 TCTCATAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCCATCATTAGGAAGC
324 TCTCATAATAGTCTCCATTCTTTTTAAGATTG-GAAGCAAAAACACATTCCCTTCATTAGGAAAC
* * * *
654034 ATGACATTGATGCTTTGTTGTTGTAAGAAAAGCTTTTCTTTTCACCATTTTTGACAGAATCAAAG
388 ATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAG
* *
654099 TTTGTCTCTTAAATTCGATAAAC
453 TTTGTCTCTTAAATACGACAAAC
* * * ** *
654122 AAGAATACTAATAATAATCCCCGTT-TTTTTAAGGATTAGGTGCCATAAACATAGTTTTCTTATT
1 ATGAATACTCATACTAATCCCCGTTCTTTTT-AGGATTAGGCACCATAAACATAGTCTTCTTATT
* * *
654186 AGGATACA-CGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTCCCCCCCAATTTTTATAAA
65 AGGATACATC-ATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * *
654249 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGA
129 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGA
* * * * *
654314 TTTGGCACTATAAACACATTCTCCTTATTACGATAAATGATATTGATGATTTTCTTTTGCATGGA
194 TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAA
* * * * *
654379 AATCTTTTC-TCAGCCCTATATTCCTTAAAATCAAAATTTATCTTTTAAATATGGCAAGCATCGA
259 AATCTTTTCTTTA-CCCTATTTTCCTTAAAATCAAAGTTTATCCTTTAAATAAGGCAAGCATCGA
* * *
654443 TTCTCGTAATAGTCTCCATTCTTTTTAAGATTGGAAAGCAAAAACACATTCCTTTCATTAGGATA
323 TTCTCATAATAGTCTCCATTCTTTTTAAGATTGG-AAGCAAAAACACATTCCCTTCATTAGGAAA
654508 CATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCTC-CCATTTTTGATAGAATCAA
387 CATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTC-CACCATTTTTGATAGAATCAA
* **
654572 AGTTTGTCTCTTAAGTACGACAAGT
451 AGTTTGTCTCTTAAATACGACAAAC
* * * *
654597 ATGAATACTTATACTAATCCCCATTCTTTTTAGGATTAAGCAACATAAACATAGTCTTCTTATTA
1 ATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* ** * * *
654662 TGATACATCATATTGATGCTTTGGTTTCACAAGAAAAGCTTTTTTTTCACATCAATTTTTGTAAA
66 GGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * ** *
654727 GTCTATGTCCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTTTGA
129 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGA
* ** *
654792 ATAGGTGCTATAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCATGG
194 TTAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGA
** * * ** *
654855 AAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGA
258 AAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTTATCCTTTAAATAAGGCAAGCATCGA
* * * * * * * *
654920 TTCTTATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCGAACACCCATTCCCTTGATTAGGATA
323 TTCTCATAATAGTCTCCATTCTTTTTAAGATT-GGAAGCAAAAACACATTCCCTTCATTAGGAAA
* * * * *
654985 CAAGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAA
387 CATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAA
* *
655050 GTTTATCTCTCAAATACGACAAAC
452 GTTTGTCTCTTAAATACGACAAAC
* * * * * *
655074 ATGTATAGTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCACAAACGTAGTCTTCTCATTA
1 ATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * * *
655139 GGATACATCATATTGATGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTATCAATTTTCGTAAAGT
66 GGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * * * *
655204 CTAAGTTTGTGACTCAAATGAGACAAAGATGGATTCTAGTAATGATCTTCATTC-TTTTGGTCAT
131 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTT-GTGAT
* * *
655268 TTGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAA
195 TAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAAA
* * * *
655333 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCCTCGATT
260 ATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTTATCCTTTAAATAAGGCAAGCATCGATT
* * * *
655398 CTCGTAACAGTCTCCATTC-TTTTAATGATTTGGATGCCAAAACACATTCCCTTCATTAGGGAAA
325 CTCATAATAGTCTCCATTCTTTTTAA-GA-TTGGAAGCAAAAACACATTCCCTTCATTA-GGAAA
* * * * *
655462 -ACT-ACATTGATGCTCTAGG-GTTGCAAGAAAAGCTTTTCTCT-CACCTGTTTTTGATAGAATC
387 CA-TGACATTGATGCT-TTGGTGTCGTAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAGAATC
* * *
655523 AAAGTTTGCCTCTTGAATATGACAAAC
449 AAAGTTTGTCTCTTAAATACGACAAAC
* * * * * * * * *
655550 ATTAATACTCATAATAATCCCCATTCTTTTCAAGATTAGACACCATGAACATAGTCTTCTCATTC
1 ATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * *
655615 GAATACATCATAATGACGCTTTGGTTTTGCAAGAAAGGCTTCTTTCCCACCAATTTTTGTAAAGT
66 GGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * *
655680 CTAAG-TCTGTGCCTCAAATGAGAGAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTCTGAT
131 CTAAGTTC-GTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGAT
* * * * * *
655744 TAGGTACTATAAACCCATTTTGCTCATTAGGACAAATGATATTGATGATTTTATTTTGTATGAAA
195 TAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAAA
* * *
655809 ATCTTTTCTTTA-CCTATTTTTCTTAATATCAAAGTTTATCCTTTAAATAACGCAAGCATCGATT
260 ATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTTATCCTTTAAATAAGGCAAGCATCGATT
* * *
655873 CTCATAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCCATCATTAGGAAGCA
325 CTCATAATAGTCTCCATTCTTTTTAAGATTG-GAAGCAAAAACACATTCCCTTCATTAGGAAACA
* * * *
655938 TGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTTTTTCCACCGTTTTTGACAGAATCAAAGT
389 TGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGT
* *
656003 TTGTCTCCTAAATTCGACAAAC
454 TTGTCTCTTAAATACGACAAAC
* * * * * *
656025 AAGAATTCTGATAATAATCCCCGTT-TTTTTAAGAATTAGGTACCATAAACATAGTCTTCTTATT
1 ATGAATACTCATACTAATCCCCGTTCTTTTT-AGGATTAGGCACCATAAACATAGTCTTCTTATT
* *
656089 AGGATACA-CAATATTGATGCTTTGGTTTTGCAAGAAAGGC--TTTTCCCCCCAATTTTTATAAA
65 AGGATACATC-ATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * * *
656151 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTCATGATCTTTATTCATTTAGTGA
129 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGA
* * * * * * *
656216 TTTGGCACTATAAACACATACTCCTTATTAGGATAAAAGATATTGACGATTTTCTTTTGCATGGA
194 TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAA
* * *
656281 AATCTTTTC-CTAGCCCTATTTTCCTTAAAATCAAAATTTATCCTTTAAATATGGCAAGCATCGA
259 AATCTTTTCTTTA-CCCTATTTTCCTTAAAATCAAAGTTTATCCTTTAAATAAGGCAAGCATCGA
* * * * * * *
656345 TTGTCGTAATTGTCTCCATTCTTTTTAACATTGGAAAGAAAAAACACATTCCTTTCATTAGGATA
323 TTCTCATAATAGTCTCCATTCTTTTTAAGATTGG-AAGCAAAAACACATTCCCTTCATTAGGAAA
* * *
656410 CATGACATTGATGCTTTGTTGTCGTAAGAAAAGCTGTTCTTTCCCCCATTTTTGATAGAATCAAA
387 CATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAA
656475 GTTTGTCTCTTAAATACGACAAAC
452 GTTTGTCTCTTAAATACGACAAAC
*
656499 ATGAATACAT-ATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCATAAACATAGTCTTCTTATT
1 ATGAATAC-TCATACTAATCCCCGTTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATT
* * * *
656563 ATGATACATCATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAG
65 AGGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TTCCCACCAATTTTTG-TA-
* *
656627 AA-TCAAAGTTTGT-CTCTCAAAT-ACGACAAACATG
127 AAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATG
656661 AATACTCATA
Statistics
Matches: 2157, Mismatches: 333, Indels: 97
0.83 0.13 0.04
Matches are distributed among these distances:
472 2 0.00
473 136 0.06
474 405 0.19
475 622 0.29
476 540 0.25
477 359 0.17
478 93 0.04
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (475 bp):
ATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATTA
GGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATT
AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAAAA
TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTTATCCTTTAAATAAGGCAAGCATCGATTC
TCATAATAGTCTCCATTCTTTTTAAGATTGGAAGCAAAAACACATTCCCTTCATTAGGAAACATG
ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
GTCTCTTAAATACGACAAAC
Found at i:656611 original size:159 final size:157
Alignment explanation
Indices: 653849--669607 Score: 3810
Period size: 159 Copynumber: 99.4 Consensus size: 157
653839 ATTAGGTACT
* * * * * * * * *
653849 ATAAACAAATTCTGCTCATTAGGATAAATGATATTTATGATTT-ATTTTGCATGAAAATCTTTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * ** * * *
653913 TTTACCCTATTTCTCT-AAAAATCAAAGTTAATC-CTTTAAATAAGGCAAGCATCG-ATTCTCAT
66 TTTCCCCCATTT-T-TGATAAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-AT
* * * *
653975 AATAGTCTCCATTCTTTTCAAGATT-GAGAAGC
126 AATAATCTCCATTCTTTTTAGGATTAG-GCAGC
* * * * *
654007 AAAAACACATTC-CCATCATTAGGA-AGCATGACATTGATGCTTT-GTTGTTGTAAGAAAAGCTT
1 ATAAACACATTCTTC-TTATTAGGATA-CATGATATTGATGCTTTGGTT-TTGCAAGAAAAGCTT
* * * * * * *
654069 TTCTTTTCACCATTTTTGACAGAATCAAAGTTTGTCTCTTAAATTCGATAAACAAGAATACTAAT
63 TTCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-AT
* * *
654134 AATAATCCCCGTT-TTTTTAAGGATTAGG-TGCC
126 AATAATCTCCATTCTTTTT-AGGATTAGGCAG-C
* * *
654166 ATAAACATAGTT-TTCTTATTAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT
1 ATAAACACA-TTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * *
654230 C--CCCCCCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATGGATTCTAG
65 CTTTCCCCC-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAAT-ACGACAAACATGAATTCTA-
* ** * *
654290 TAATGATCTTTATTC-ATTTAGTGATTTGGCA-C
125 TAATAATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** * * *
654322 TATAAACACATTCTCCTTATTACGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
*** * * * * * * * *
654387 CTCAGCCCTATATTCCTT-A-AAATCAAAATTTATCTTTTAAATATGGCAAGCATCG-ATTCTCG
65 CTTTCCCCCAT-TT--TTGATAAATCAAAGTTTGTCTCTTAAATACGACAAACAT-GAATTCT-A
* * *
654449 TAATAGTCTCCATTCTTTTTAAGATT-GGAAAGC
125 TAATAATCTCCATTCTTTTTAGGATTAGG-CAGC
* * * * * *
654482 AAAAACACATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTT
1 ATAAACACATT-CTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * ** * *
654546 CTTTCTCCCATTTTTGATAGAATCAAAGTTTGTCTCTTAAGTACGACAAGTATGAATACTTATAC
65 CTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTC-TATAA
* * *
654611 TAATCCCCATTCTTTTTAGGATTAAGCAAC
128 TAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * ** *
654641 ATAAACATAGTCTTCTTATTATGATACATCATATTGATGCTTTGGTTTCACAAGAAAAGCTTTTT
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * ** * *
654706 TTTCACATCAATTTTTG-TAAAGTCTATGTCCGTGC-CTCT-AATGA-GATAAACATGGATTCTA
66 TTTC-C-CCCATTTTTGATAAA-TCAAAGTTTGT-CTCT-TAAAT-ACGACAAACATGAATTCTA
*** * * *
654767 GTAA-AGATCTTTTTTCATTTTT-TGAATAGG-TGC
125 -TAATA-ATCTCCATTC-TTTTTAGGATTAGGCAGC
* * * * ** * * *
654800 TATAAACA-ATTCTCCTCT-TCAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATCTTT
1 -ATAAACACATTCTTCT-TATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* *** * ** * * * *
654863 TCTTTACGTTATTTTCCTTA-AAATCAAAGTTCATC-CTTTAA-ACAAACCAAGCTTCG-ATTCT
64 TCTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATAC-GA-CAAACAT-GAATTC-
** * * * *
654924 TATAATAGCCCCCATTCTTTTTAAGATTGGGAAGC
123 TATAATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * * * ***
654959 GA-ACACCCATTC-CCTTGATTAGGATACAAGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTT
1 -ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * *
655022 TCTTTCCACCGTTTTTGATAAAATCAAAGTTTATCTCTCAAATACGACAAACATGTATAGTC-AT
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTCTTAAATACGACAAACATG-A-ATTCTAT
* * * * *
655086 ACTAATCCCCGTTCTTTTCAGGATTAGGCACC
126 AATAATCTCCATTCTTTTTAGGATTAGGCAGC
* ** * * * * * *
655118 ACAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAGGAAAGGC-TTT-
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * ** * * *
655181 TTTCCTATCAATTTTCG-TAAAGTCTAAGTTTGTGACTCAAATGA-GACAAAGATGGATTCTAGT
66 TTTCC--CCCATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGAATTCTA-T
* * *
655244 AATGATCTTCATTC-TTTT-GGTCATTTGGCA-C
126 AATAATCTCCATTCTTTTTAGG--ATTAGGCAGC
* * * * * ** * *
655275 TATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* ** * ** * * * * *
655340 CTTTGCCTTATTTTCCTTA-AAATCAAAGTTCATC-CTTTAAATAAGGCAAGCCTCG-ATTCTCG
65 CTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-A
* * * * *
655402 TAACAGTCTCCATTCTTTTAATGATTTGG-ATGCC
125 TAATAATCTCCATTCTTTTTAGGATTAGGCA-G-C
* * * * *
655436 A-AAACACATTC-CCTTCATTAGGGA-AAACT-ACATTGATGCTCTAGG-GTTGCAAGAAAAGCT
1 ATAAACACATTCTTCTT-ATTA-GGATACA-TGATATTGATGCT-TTGGTTTTGCAAGAAAAGCT
* * ** * * * * *
655496 TTTCTCTCACCTGTTTTTGATAGAATCAAAGTTTGCCTCTTGAATATGACAAACATTAATACTCA
62 TTTCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-A
* * * * *
655561 TAATAATCCCCATTCTTTTCAAGATTAGACACC
125 TAATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * * * * * * *
655594 ATGAACATAGTCTTCTCATTCGAATACATCATAATGACGCTTTGGTTTTGCAAGAAAGGC--TTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * *
655657 TTTCCCACCAATTTTTG-TAAAGTCTAAGTCTGTGC-CTCAAATGA-GAGAAACATGGATTCTAG
66 TTTCCC-CC-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAAT-ACGACAAACATGAATTCTA-
* * * ** *
655719 TAA-AGATCTTCGTTCATTTTCTGATTAGGTA-C
125 TAATA-ATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * * ** * * *
655751 TATAAACCCATT-TTGCTCATTAGGACAAATGATATTGATGATTTTATTTTGTATGAAAATCTTT
1 -ATAAACACATTCTT-CTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * ** * *
655815 TCTTT-ACCTATTTTTCTTAATATCAAAGTTTATC-CTTTAAATAACG-CAAGCATCG-ATTCTC
64 TCTTTCCCCCATTTTTGATAA-ATCAAAGTTTGTCTC-TTAAAT-ACGACAAACAT-GAATTCT-
* * * *
655876 ATAATAGTCTCCATTCTTTTCAAGATT-GAGAAGC
124 ATAATAATCTCCATTCTTTTTAGGATTAG-GCAGC
* * * * * *
655910 AAAAACACATTC-CCATCATTAGGA-AGCATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTT
1 ATAAACACATTCTTC-TTATTAGGATA-CATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * * * *
655973 TTTTTCCACCGTTTTTGACAGAATCAAAGTTTGTCTCCTAAATTCGACAAACAAGAATTCTGATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * * * *
656038 ATAATCCCCGTT-TTTTTAAGAATTAGGTACC
127 ATAATCTCCATTCTTTTT-AGGATTAGGCAGC
* * ** *
656069 ATAAACATAGTCTTCTTATTAGGATACACAATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * *
656134 ---CCCCCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATGGATTCTAGT
66 TTTCCCCC-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAAT-ACGACAAACATGAATTCTA-T
* * ** * *
656193 CATGATCTTTATTC-ATTTAGTGATTTGGCA-C
126 AATAATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * * * ** * * *
656224 TATAAACACATACTCCTTATTAGGATAAAAGATATTGACGATTTTCTTTTGCATGGAAATCTTTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* ** * * * * * * * * *
656289 CCTAGCCCTATTTTCCTTA-AAATCAAAATTTATC-CTTTAAATATGGCAAGCATCG-ATTGTCG
65 CTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-A
** ** * *
656351 TAATTGTCTCCATTCTTTTTAACATT-GGAAAGA
125 TAATAATCTCCATTCTTTTTAGGATTAGG-CAGC
* * * * * *
656384 AAAAACACATTCCTT-TCATTAGGATACATGACATTGATGCTTT-GTTGTCGTAAGAAAAGCTGT
1 ATAAACACATT-CTTCTTATTAGGATACATGATATTGATGCTTTGGTT-TTGCAAGAAAAGCTTT
*
656447 TCTTTCCCCCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACATATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTC-TATA
* * *
656512 CTAATCCCCGTTCTTTTTAGGATTAGGCAGC
127 ATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * *
656543 ATAAACATAGTCTTCTTATTATGATACATCATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * *
656608 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTCAAATACGACAAACATGAATACTCATACT
66 TTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAAT
* * *
656673 AATCCCCGTTCTTTTTAGGATTAGGCAAC
129 AATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * *
656702 ATAAACATAGTCTTCTTATTAGGGTACATGATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * * * *
656766 TTCCCCCCAATTTTT-ATAAAGTCTAAGTTTGTGC-CTCAAACGA-GACAAACATGGAGTCCAGT
66 TTTCCCCC-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAA-TACGACAAACATGAATTCTA-T
** * * *
656828 AATAATCTTTATTC-ATTTGGTGATTTGGCA-C
126 AATAATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * * *
656859 TATAAACACATTCTCCTCATTAGGATGA-ATGATATTGATG-ATTGTCTTTTGCAGGAAAATCTT
1 -ATAAACACATTCTTCTTATTAGGAT-ACATGATATTGATGCTTTG-GTTTTGCAAGAAAAGCTT
*** * * ** * * * * *
656922 TTCTGAGCCCTATTTTCCTTA-AAATCAAAGTTCATCTTTTAAATATGGCGAGCATCG-ATTCTC
63 TTCTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATACGACAAACAT-GAATTCT-
* * * * * *
656985 GTAATAGTCTCCATTCATTTTAACG-TTGGGAAGC
124 ATAATAATCTCCATTC-TTTTTAGGATTAGGCAGC
* * * * * * *
657019 AAAAACACATTC-CCTTCATTAGGATACATGACATTAATGCTTTGGTGTGGTAAGAAAAGCTTTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * *
657083 CTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAACACGACAAGCATGAATACTCATAC
65 CTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAA
* *
657148 TAATC-CCTATTCTTTTTTGGATTAGGCAAC
128 TAATCTCC-ATTCTTTTTAGGATTAGGCAGC
* * * * * *
657178 ATAAATATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGGTTCGCAAGAAAAGCTTTTT
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGC-TTTT
* * * * * * * *
657243 TTTTCACACCAATTTTT-TTAAAGTCTAAGTTCGTGC-CTCT-AATGA-GATAAACAGGGATTCT
65 CTTTC-C-CCCATTTTTGATAAA-TCAAAGTTTGT-CTCT-TAAAT-ACGACAAACATGAATTCT
* *** * * *
657304 AGTAA-AGATATTTTTTCATTTT-GTGAATAGGTA-C
124 A-TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* ** * * * ** ** * * *
657338 TATAAACA-ATTCTCCTCT-CCAGGATAAATAATATTGATGATTTTATTTTGCGTGGAAATCTAT
1 -ATAAACACATTCTTCT-TATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
*** * ** * * * *
657401 TC-TTCACGTTATTTTCCTTA-AAATCAAAGTTCATCT-TTAAACA-AACCAAGCTTCG-ATTCT
64 TCTTTC-CCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATACGA-CAAACAT-GAATTCT
** * *
657461 CATAATAGCCTCCATTCTTTTTA-GATTGGGAAGC
124 -ATAATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * * * ***
657495 A-AACACGCATTC-CCTTTGTTAGGATCCATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTT
1 ATAA-ACACATTCTTC-TTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * * *
657558 TCTTTCCACCGTTTTCGATAAAATCAAAGTTTATCTCTTAAATATGACAAACATGAATACTCATA
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * * * *
657623 CTAAT-TCTCGTTATTTTCAGGATTAGGCACC
127 ATAATCTC-CATTCTTTTTAGGATTAGGCAGC
* * * * * * * * *
657654 ACAAACGCAATCTTCTCATTAGGATACATCATATTGACGCTTTGATTTTGCAGGAAAGGC-TTT-
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
** * * * * * *
657717 TTTCCTACTAATTTTCG-TAAATTCTAACTTCATGACTC--AAATGA-GACAAACATGGATTTTA
66 TTTCC--CCCATTTTTGATAAA-TCAAAGTT--TGTCTCTTAAAT-ACGACAAACATGAATTCTA
* *
657778 GTAATGATCTTCATTC-TTTT-GGTCATTAGGCA-C
125 -TAATAATCTCCATTCTTTTTAGG--ATTAGGCAGC
* * * * * ** *
657811 TATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCAAGAAAATCTTTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * *** ** * * * * **
657876 CTTTGCCCTATTTTCCTTAAAGTCAAAGTTCATC-CTTTAAATAAGGCAAGCCTCG-ATTCCCGT
65 CTTTCCCCCATTTTTGATAAA-TCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATT-CTAT
* * * * * * * *
657939 AACAGTCCCCATTCTTTTCATGATTTGGATACC
126 AATAATCTCCATTCTTTTTAGGATTAGG-CAGC
** * * * ** ** *
657972 A-AAACACATTCCCCTCATTAGGGTAAATGACGTTGATGCTTTGGGATTGCAATAAAAGCTTTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
** * * * * *
658036 TTTCCAACATTTTTGATAGAATCAAAGTTTGTCTCCTAAATATGACAAACTTGAATACTCATACT
66 TTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAAT
* * *
658101 AATCCCCATTCTTTTCAAGATTAGGCA-C
129 AATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * * * *
658129 TATAAACATAGTCTTCTCATTCA-AATACATCG-TAATGATGCTTTGGTTTTGCCAGAAATGC-T
1 -ATAAACACATTCTTCTTATT-AGGATACAT-GATATTGATGCTTTGGTTTTGCAAGAAAAGCTT
* * * *
658191 TT-TTTCCCACCAATTTTCG-TAAAGTCTAAA-TTCGTGTC-CAAATGA-GACAAACAT-AGATT
63 TTCTTTCCC-CC-ATTTTTGATAAA-TC-AAAGTTTGTCTCTTAAAT-ACGACAAACATGA-ATT
* * *
658250 CTAGTAA-AGATCTTCATTATTTTT-GTGATTAGGTA-C
122 CTA-TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * * * * * ** ** *
658286 TACAAACACATTATGCTCATCAAGATAAATGATATTGATGATTTTATTTTGCTTGGAAATG-TTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGC-AAGAAAAGCTTT
** * ** ** * * * * *
658350 TCTTTATCCTATTTTTCTTAAAATCAAAGTTCATCTTTTAAGTAAGGCAAGCATCG-ATTCTCAT
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTCTTAAATACGACAAACAT-GAATTCT-AT
** * * *
658414 AATTGTCTCCATTCTTTTCAAGATT-GAGAAGC
126 AATAATCTCCATTCTTTTTAGGATTAG-GCAGC
* * * * * ** *
658446 AAAAACACATT-TCCTTCATTAGGATGCATGACATTGATGCTTCGGGGTTGTAAGAAAAGCTTTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * *
658510 CTTTCCTCCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACTAATAA
65 CTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAA
* * * * *
658575 TAATC-CCGTTTTTTTTAGCATTAGGTACC
128 TAATCTCCATTCTTTTTAGGATTAGGCAGC
** * * * ** *
658604 ATAAACGTAGTCTTCTTATTAGGATACACGACATTGATGCTTTGGTTTCACAAGAAAGGC-TTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * * *
658668 TTCTCCCCAATTTTT-ATGAAGTCTAAGTTCT-TGC-CTCAAATGA-GACAAACAAGGATTCTAG
66 TT-TCCCCCATTTTTGAT-AAATCAAAGTT-TGT-CTCTTAAAT-ACGACAAACATGAATTCTA-
* * *
658729 TAATTATCTTCATTCTTTTTTGGTCATTAGGCA-C
125 TAATAATCTCCATTCTTTTTAGG--ATTAGGCAGC
* * *** * * ** ** * *
658763 -TGCAAAGACATTCTTCTCAACGGGATAAATGATATTGATGATTTTTTTTTGCGTGGAAATCTTT
1 AT--AAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * * * * *
658827 TCTTTGCCCTATTTTCCTTA-AAATCAAAGTTTATC-CTTTAAATAAGGCAAGCCTCG-ATTCTC
64 TCTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-
* ** * * *
658889 GTAGCAATCTCCATTCTTTTCATGA-TATGG-ATTCC
124 ATAATAATCTCCATTCTTTTTAGGATTA-GGCA--GC
* ** * * **
658924 A-AAACACATTC-CCTTCATTAGGGCAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * * *
658987 CTTTCACCCGTTTTTGATAGAATGAAAGTTTGTCTCCTAAATATGACAAACATGAATACTCATAC
65 CTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAA
* * * * *
659052 TAATCCCCATTCTTTTCAAGATTAGACACC
128 TAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * * * *
659082 ATAAACATAGTCTTCTCATTCGAATACATCG-TAATGATGCTTTGGTTTTGTAAGAAAAGC--TT
1 ATAAACACATTCTTCTTATTAGGATACAT-GATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * *
659144 -TTTCCCACCAATTTTTG-TAAAGTCTAAGTTCGTGTCTCAAATGA-GAAAAACATGGATTCTAG
65 CTTTCCC-CC-ATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGAATTCTA-
* * *
659206 TAA-AGATCTTTC-TTCATTTT-GTGATTAGGTA-C
125 TAATA-ATC-TCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** ** *
659238 TATAAACACATT-TTGCTCATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTT
1 -ATAAACACATTCTT-CTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * ** ** * * *
659302 TCTTTACCCTATTTTTCTTAAAATCAAAGTTAATC-CTTTAAATAAGGCAAGCATCG-ATTCTGA
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-A
* * *
659365 TAATAGTCTCCATTC-TTTTCGAGATT-GAGAAGC
125 TAATAATCTCCATTCTTTTTAG-GATTAG-GCAGC
* * * * ** * *
659398 AAAAACACATTGTT-TTCATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * *
659462 CTTTCCACCGTTTTTGACAAAATCAAAGTTTATCTCTTAAATACGACAAACAAGAATACTGATAA
65 CTTTCCCCCATTTTTGA-TAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAA
** * *
659527 TAATC-CCCGTCTTTTTAGGATTAGGTACC
128 TAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * *
659556 ATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGC-TTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * *
659620 TTCCCCCCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATGGAA-TCCAG
66 TTTCCCCC-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAAT-ACGACAAACAT-GAATTCTA-
* ** * * *
659681 TAATGATCTTTATTC-ATTTGGTGATTTGGCA-C
125 TAATAATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** * *
659713 TATAAACACATTCTCCTCATTAGGATGA-TTGATATTGATGATTTTCTTTTGCATGAAAATCTTT
1 -ATAAACACATTCTTCTTATTAGGAT-ACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
*** ** * ** * * * * *
659777 TCTAAGCCTTATTTTCCTTA-AAATCAAAGTTCATCTTTTAAATATGGCAAGCATCG-ATTCTCG
64 TCTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATACGACAAACAT-GAATTCT-A
* * * ** * *
659840 TAATAGTCTCCTTTCTTCTTAACATTGGGAAGC
125 TAATAATCTCCATTCTTTTTAGGATTAGGCAGC
* *** *
659873 A-AAAGCACATTC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGC--T
1 ATAAA-CACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * *
659934 TCTCTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * *
659999 CTAATCCCCATTCCTTTTAGGATTAGGCAGC
127 ATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * ** * * * *
660030 ATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAAGAAAGGCTTTTA
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * *
660095 TATCACACCAATTTTTG-TAAAGTC-AAGTTTGTGC-CTCT-AATGA-GATAAATATGGATTCTA
66 TTTC-C-CCCATTTTTGATAAA-TCAAAGTTTGT-CTCT-TAAAT-ACGACAAACATGAATTCTA
* * *** * * *
660155 CAAAAGATCTTTTTTCATTTT-GTGAATAGGTA-C
125 TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* ** * ** ** * **
660188 TATAAACA-ATT-TTGCTT-TTCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATT
1 -ATAAACACATTCTT-CTTATT-AGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTT
*** * ** * * * *
660250 TTC-TTCACGTTATTTTCCTTA-AAATCAAAGTTCATC-CTTTAA-ACAAACCAAGCTTCG-ATT
63 TTCTTTC-CCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATAC-GA-CAAACAT-GAATT
** * *
660310 CTCATAATAGCCTCCATTCTTGTTTA-GATTGGGAAGC
122 CT-ATAATAATCTCCATTCTT-TTTAGGATTAGGCAGC
* * * * * *
660347 A-AACACACATTC-CCTTTATTACGATCCATAAAATTGATGCTTTGG-TGT-CATCAGAAAAGCT
1 ATAA-ACACATTCTTC-TTATTAGGATACATGATATTGATGCTTTGGTTTTGCA--AGAAAAGCT
* * * * * * * * *
660408 TTTCCTTCCACCGTTTTTTATAGAATCGAAGTTTGTTTTTTAAATATGACAAACATGAATACTCA
62 TTTCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-A
* * * *
660473 TACTAATCCCCGTT-TTTTTCAGGATTAGGCACC
125 TAATAATCTCCATTCTTTTT-AGGATTAGGCAGC
** * * * ** * *
660506 ATAAACGTAGTCTT-TTGATTAGGATACATAATATTGATGCTTTGGCTTCACAGGAAAGGC-TTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * ** *
660569 -TTTCCTACCAATTTTTG-TAAAGTCTAAGTTCGTGACTCAAATGA-GACAAACAT-AGATTCTA
65 CTTTCC--CCCATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGA-ATTCTA
* *
660630 GTAATGATCTTCATTC-TTTT-GGTCATTAGGCA-C
125 -TAATAATCTCCATTCTTTTTAGG--ATTAGGCAGC
* * * ** * * * * * *
660663 TATAAATACATTCTCCTCAAGAGGAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* ** * * ** * * *
660728 CTTTGCCTTATTTTCCTTA-AAATCTAAGTTCATC-CTTTAAATAAGGCAAGGC-TCG-ATTCTC
65 CTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTC-TTAAATACGACAA-ACAT-GAATTCT-
* *** * * *
660789 GTAACGGTCTCCATTCTTTTCATGATTTGG-ATGC
124 ATAATAATCTCCATTCTTTTTAGGATTAGGCA-GC
* ** * * * **
660823 -CAAA-ACATATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTT
1 ATAAACACAT-TCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * * * *
660886 GCTTTCCACCGTTTTTTATAAAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATA
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * * * *
660951 CTAATGC-CCATTCTTTTCAAGATTAGACACC
127 ATAAT-CTCCATTCTTTTTAGGATTAGGCAGC
* * * * * * *
660982 ATAAACATAGTCTTCTCATTCGAATACATCG-TAATGATGCTTTGGTTTTGTAAGAAAAGC-TTT
1 ATAAACACATTCTTCTTATTAGGATACAT-GATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * *
661045 -TTTCCCACCAATTTTTG-TAAAGTCTAAGTTCGTGTCTCAAATGA-GAAAAACATGGATTCTAG
65 CTTTCCC-CC-ATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGAATTCTA-
*** * *
661107 TAA-AGATCTTTGTTCATTTT-GTGATTAGGTA-C
125 TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** ** *
661139 TATAAACACATT-TTGCTCATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTT
1 -ATAAACACATTCTT-CTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* ** ** ** * * *
661203 TCTTTACCTTATTTTTCTTAAAATCAAAGTTAATC-CTTTAAATAAGGCAAGCATCG-ATTCTGA
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-A
* * *
661266 TAATAGTCTCCATTC-TTTTCGAGATT-GAGAAGC
125 TAATAATCTCCATTCTTTTTAG-GATTAG-GCAGC
* * * ** * *
661299 AAAAACACATTCTT-TTCATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * *
661363 CTTTCCACCGTTTTTGACAAAATCAAAGTTTATCTCTTAAATACGACAAACAAGAATACTGATAA
65 CTTTCCCCCATTTTTGA-TAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAA
** * *
661428 TAATC-CCCGTCTTTTTAGGATTAGGTACC
128 TAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * *
661457 ATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGC-TTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * *
661521 -TTCCCCTCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATGGAA-TCCA
66 TTTCCCC-C-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAAT-ACGACAAACAT-GAATTCTA
* ** * * *
661581 GTAATGATCTTTATTC-ATTTGGTGATTTGGCA-C
125 -TAATAATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** * *
661614 TATAAACACATTCTCCTCATTAGGATGA-TTGATATTGATGATTTTCTTTTGCATGAAAATCTTT
1 -ATAAACACATTCTTCTTATTAGGAT-ACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
*** ** * ** * * * * *
661678 TCTAAGCCTTATTTTCCTTA-AAATCAAAGTTCATCTTTTAAATATGGCAAGCATCG-ATTCTCG
64 TCTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATACGACAAACAT-GAATTCT-A
* * * ** * *
661741 TAATAGTCTCCTTTCTTCTTAACATTGGGAAGC
125 TAATAATCTCCATTCTTTTTAGGATTAGGCAGC
* *** *
661774 A-AAAGCACATTC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTT
1 ATAAA-CACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * *
661837 TCTCTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTATTA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCTA-TA
* * *
661902 CTAATCCCCATTCCTTTTAGGATTAGGCAGC
127 ATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * ** * * * *
661933 ATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAAGAAAGGCTTTTA
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * * *
661998 TATCACACCAATTTTTG-TAAAGTC-AAGTTCGTGC-CTCT-AATGA-GATAAATATGGATTCTA
66 TTTC-C-CCCATTTTTGATAAA-TCAAAGTTTGT-CTCT-TAAAT-ACGACAAACATGAATTCTA
* * *** * * *
662058 CAAAAGATCTTTTTTCATTTT-GTGAATAGGTA-C
125 TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * ** * ** ** * **
662091 TATAAACA-ATT-TTGCTCT-TCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATT
1 -ATAAACACATTCTT-CT-TATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTT
*** * ** * * * *
662153 TTC-TTCACGTTATTTTCCTTA-AAATCAAAGTTCATC-CTTTAA-ACAAACCAAGCTTCG-ATT
63 TTCTTTC-CCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATAC-GA-CAAACAT-GAATT
** * *
662213 CTCATAATAGCCTCCATTCTTGTTTA-GATTGGGAAGC
122 CT-ATAATAATCTCCATTCTT-TTTAGGATTAGGCAGC
* * * * * *
662250 A-AACACACATTC-CCTTTATTACGATCCATAAAATTGATGCTTTGG-TGT-CATCAGAAAAGCT
1 ATAA-ACACATTCTTC-TTATTAGGATACATGATATTGATGCTTTGGTTTTGCA--AGAAAAGCT
* * * * * * *
662311 TTTCCTTCCACCATTTTTTATAGAATCGAAGTTTGTTTTTTAAATACGACAAACATGAATACTCA
62 TTTCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-A
* * * *
662376 TACTAATCCCCGTT-TTTTTCAGGATTAGGCACC
125 TAATAATCTCCATTCTTTTT-AGGATTAGGCAGC
** * * * * * * *
662409 ATAAACGTAGTCTT-TTGATTACGATACATAATATTGATGCTTTGGCTTCGCAGGAAAGGC-TTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * ** *
662472 -TTTCCTACCAATTTTTG-TAAAGTCTAAGTTCGTGACTCAAATGA-GACAAACAT-AGATTCTA
65 CTTTCC--CCCATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGA-ATTCTA
* *
662533 GTAATGATCTTCATTC-TTTT-GGTCATTAGGCA-C
125 -TAATAATCTCCATTCTTTTTAGG--ATTAGGCAGC
* * ** * * * * * *
662566 TATAAACACATTCTCCTCAACAGGAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* ** * * ** * * *
662631 CTTTGCCTTATTTTCCTTA-AAATCTAAGTTCATC-CTTTAAATAAGGCAAGGC-TCG-ATTCTC
65 CTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTC-TTAAATACGACAA-ACAT-GAATTCT-
* *** * * *
662692 GTAACGGTCTCCATTCTTTTCATGATTTGG-ATGC
124 ATAATAATCTCCATTCTTTTTAGGATTAGGCA-GC
* ** * * * **
662726 -CAAA-ACATATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTT
1 ATAAACACAT-TCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * * * *
662789 GCTTTCCACCGTTTTTTATAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * * * *
662854 CTAATGC-CCATTCTTTTCAAGATTAGACACC
127 ATAAT-CTCCATTCTTTTTAGGATTAGGCAGC
* * * * * * *
662885 ATAAACATAGTCTTCTCATTCGAATACATCG-TAATGATGCTTTGGTTTTGTAAGAAAAGC-TTT
1 ATAAACACATTCTTCTTATTAGGATACAT-GATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * *
662948 -TTTCCCACCAATTTTTG-TAAAGTCTAAGTTCGTGTCTCAAATGA-GAAAAACATGGATTCTAG
65 CTTTCCC-CC-ATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGAATTCTA-
*** * *
663010 TAA-AGATCTTTGTTCATTTT-GTGATTAGGTA-C
125 TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** ** *
663042 TATAAACACATT-TTGCTCATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTT
1 -ATAAACACATTCTT-CTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * ** ** * * *
663106 TCTTTACCCTATTTTTCTTAAAATCAAAGTTAATC-CTTTAAATAAGGCAAGCATCG-ATTCTGA
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-A
* * * *
663169 TAATAGTCTCTATTC-TTTTCGAGATT-GAGAAGC
125 TAATAATCTCCATTCTTTTTAG-GATTAG-GCAGC
* * * ** * *
663202 AAAAACACATTCTT-TTCATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* ** * * * *
663266 CTTTCCACTGTTTTTGACAAAATCAAAGTTTATCTCTTAAATACGACAAACAAGAATACTGATAA
65 CTTTCCCCCATTTTTGA-TAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAA
** * *
663331 TAATC-CCCGTCTTTTTAGGATTAGGTACC
128 TAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * *
663360 ATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGC-TTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * *
663424 -TTCCCCTCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATGGAA-TCCA
66 TTTCCCC-C-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAAT-ACGACAAACAT-GAATTCTA
* ** * * *
663484 GTAATGATCTTTATTC-ATTTGGTGATTTGGCA-C
125 -TAATAATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** * *
663517 TATAAACACATTCTCCTCATTAGGATGA-TTGATATTGATGATTTTCTTTTGCATGAAAATCTTT
1 -ATAAACACATTCTTCTTATTAGGAT-ACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
*** ** * ** * * * * *
663581 TCTAAGCCTTATTTTCCTTA-AAATCAAAGTTCATCTTTTAAATATGGCAAGCATCG-ATTCTCG
64 TCTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATACGACAAACAT-GAATTCT-A
* * * ** * *
663644 TAATAGTCTCCTTTCTTCTTAACATTGGGAAGC
125 TAATAATCTCCATTCTTTTTAGGATTAGGCAGC
* *** *
663677 A-AAAGCACATTC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTT
1 ATAAA-CACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * *
663740 TCTCTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTATTA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCTA-TA
* * *
663805 CTAATCCCCATTCCTTTTAGGATTAGGCAGC
127 ATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * ** * * * *
663836 ATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAAGAAAGGCTTTTA
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * * *
663901 TATCACACCAATTTTTG-TAAAGTC-AAGTTCGTGC-CTCT-AATGA-GATAAATATGGATTCTA
66 TTTC-C-CCCATTTTTGATAAA-TCAAAGTTTGT-CTCT-TAAAT-ACGACAAACATGAATTCTA
* * *** * * *
663961 CAAAAGATCTTTTTTCATTTT-GTGAATAGGTA-C
125 TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * ** * ** ** * **
663994 TATAAACA-ATT-TTGCTCT-TCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATT
1 -ATAAACACATTCTT-CT-TATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTT
*** * ** * * * *
664056 TTC-TTCACGTTATTTTCCTTA-AAATCAAAGTTCATC-CTTTAA-ACAAACCAAGCTTCG-ATT
63 TTCTTTC-CCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATAC-GA-CAAACAT-GAATT
** * *
664116 CTCATAATAGCCTCCATTCTTGTTTA-GATTGGGAAGC
122 CT-ATAATAATCTCCATTCTT-TTTAGGATTAGGCAGC
* * * * *
664153 A-AACACACATTC-CCTTTATTACGATCCAT-AAATTGATGCTTTGG-TGT-CATCAGAAAAGCT
1 ATAA-ACACATTCTTC-TTATTAGGATACATGATATTGATGCTTTGGTTTTGCA--AGAAAAGCT
* * * * * * *
664213 TTTCCTTCCACCATTTTTTATAGAATCGAAGTTTGTTTTTTAAATACGACAAACATGAATACTCA
62 TTTCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-A
* * * *
664278 TACTAATCCCCGTT-TTTTTCAGGATTAGGCACC
125 TAATAATCTCCATTCTTTTT-AGGATTAGGCAGC
** * * * * * * *
664311 ATAAACGTAGTCTT-TTGATTACGATACATAATATTGATGCTTTGGCTTCGCAGGAAAGGC-TTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * ** *
664374 -TTTCCTACCAATTTTTG-TAAAGTCTAAGTTCGTGACTCAAATGA-GACAAACAT-AGATTCTA
65 CTTTCC--CCCATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGA-ATTCTA
* *
664435 GTAATGATCTTCATTC-TTTT-GGTCATTAGGCA-C
125 -TAATAATCTCCATTCTTTTTAGG--ATTAGGCAGC
* * ** * * * * * *
664468 TATAAACACATTCTCCTCAACAGGAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* ** * * ** * * *
664533 CTTTGCCTTATTTTCCTTA-AAATCTAAGTTCATC-CTTTAAATAAGGCAAGGC-TCG-ATTCTC
65 CTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTC-TTAAATACGACAA-ACAT-GAATTCT-
* *** * * *
664594 GTAACGGTCTCCATTCTTTTCATGATTTGG-ATGC
124 ATAATAATCTCCATTCTTTTTAGGATTAGGCA-GC
* ** * * * **
664628 -CAAA-ACATATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTT
1 ATAAACACAT-TCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * * * *
664691 GCTTTCCACCGTTTTTTATAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * * * *
664756 CTAATGC-CCATTCTTTTCAAGATTAGACACC
127 ATAAT-CTCCATTCTTTTTAGGATTAGGCAGC
* * * * * * *
664787 ATAAACATAGTCTTCTCATTCGAATACATCG-TAATGATGCTTTGGTTTTGTAAGAAAAGC-TTT
1 ATAAACACATTCTTCTTATTAGGATACAT-GATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * *
664850 -TTTCCCACCAATTTTTG-TAAAGTCTAAGTTCGTGTCTCAAATGA-GAAAAACATGGATTCTAG
65 CTTTCCC-CC-ATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGAATTCTA-
*** * *
664912 TAA-AGATCTTTGTTCATTTT-GTGATTAGGTA-C
125 TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** ** *
664944 TATAAACACATT-TTGCTCATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTT
1 -ATAAACACATTCTT-CTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * ** ** * * *
665008 TCTTTACCCTATTTTTCTTAAAATCAAAGTTAATC-CTTTAAATAAGGCAAGCATCG-ATTCTGA
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-A
* * *
665071 TAATAGTCTCCATTC-TTTTCGAGATT-GAGAAGC
125 TAATAATCTCCATTCTTTTTAG-GATTAG-GCAGC
* * * ** * *
665104 AAAAACACATTCTT-TTCATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * * *
665168 CTTTCCACCGTTTTTGACAAAATCAAAGTTTATCTTTTAAATACGACAAACAAGAATACTGATAA
65 CTTTCCCCCATTTTTGA-TAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAA
** * *
665233 TAATC-CCCGTCTTTTTAGGATTAGGTACC
128 TAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * *
665262 ATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGC-TTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * *
665326 -TTCCCCTCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATGGAA-TCCA
66 TTTCCCC-C-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAAT-ACGACAAACAT-GAATTCTA
* ** * * *
665386 GTAATGATCTTTATTC-ATTTGGTGATTTGGCA-C
125 -TAATAATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** * *
665419 TATAAACACATTCTCCTCATTAGGATGA-TTGATATTGATGATTTTCTTTTGCATGAAAATCTTT
1 -ATAAACACATTCTTCTTATTAGGAT-ACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
*** ** * ** * * * * *
665483 TCTAAGCCTTATTTTCCTTA-AAATCAAAGTTCATCTTTTAAATATGGCAAGCATCG-ATTCTCG
64 TCTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATACGACAAACAT-GAATTCT-A
* * * ** * *
665546 TAATAGTCTCCTTTCTTCTTAACATTGGGAAGC
125 TAATAATCTCCATTCTTTTTAGGATTAGGCAGC
* *** *
665579 A-AAAGCACATTC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTT
1 ATAAA-CACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * *
665642 TCTCTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * *
665707 CTAATCCCCATTCCTTTTAGGATTAGGCAGC
127 ATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * ** * * * *
665738 ATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAAGAAAGGCTTTTA
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * * *
665803 TATCACACCAATTTTTG-TAAAGTC-AAGTTCGTGC-CTCT-AATGA-GATAAATATGGATTCTA
66 TTTC-C-CCCATTTTTGATAAA-TCAAAGTTTGT-CTCT-TAAAT-ACGACAAACATGAATTCTA
* * *** * * *
665863 CAAAAGATCTTTTTTCATTTT-GTGAATAGGTA-C
125 TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * ** * ** ** * **
665896 TATAAACA-ATT-TTGCTCT-TCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATT
1 -ATAAACACATTCTT-CT-TATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTT
*** * ** * * * *
665958 TTC-TTCACTTTATTTTCCTTA-AAATCAAAGTTCATC-CTTTAA-ACAAACCAAGCTTCG-ATT
63 TTCTTTC-CCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATAC-GA-CAAACAT-GAATT
** * *
666018 CTCATAATAGCCTCCATTCTTGTTTA-GATTGGGAAGC
122 CT-ATAATAATCTCCATTCTT-TTTAGGATTAGGCAGC
* * * * * *
666055 A-AACACACATTC-CCTTTATTACGATCCATAAAATTGATGCTTTGG-TGT-CATCAGAAAAGCT
1 ATAA-ACACATTCTTC-TTATTAGGATACATGATATTGATGCTTTGGTTTTGCA--AGAAAAGCT
* * * * * * * *
666116 TTTCCTTCCACCGTTTTTTATAGAATCGAAGTTTGTTTTTTAAATACGACAAACATGAATACTCA
62 TTTCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-A
* * * *
666181 TACTAATCCCCGTT-TTTTTCAGGATTAGGCACC
125 TAATAATCTCCATTCTTTTT-AGGATTAGGCAGC
** * * * * * *
666214 ATAAACGTAGTCTT-TTGATTAGGATACATAATATTGATGCTTTGGCTTCGCAGGAAAGGC-TTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * ** *
666277 -TTTCCTACCAATTTTTG-TAAAGTCTAAGTTCGTGACTCAAATGA-GACAAACAT-AGATTCTA
65 CTTTCC--CCCATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGA-ATTCTA
* **
666338 GTAATGATCTTTATTC-TTTT-GGTCATTAGGCA-C
125 -TAATAATCTCCATTCTTTTTAGG--ATTAGGCAGC
* * ** * * * * * *
666371 TATAAACACATTCTCCTCAACAGGAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* ** * * ** * * *
666436 CTTTGCCTTATTTTCCTTA-AAATCTAAGTTCATC-CTTTAAATAAGGCAAGGC-TCG-ATTCTC
65 CTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTC-TTAAATACGACAA-ACAT-GAATTCT-
* *** * * *
666497 GTAACGGTCTCCATTCTTTTCATGATTTGG-ATGC
124 ATAATAATCTCCATTCTTTTTAGGATTAGGCA-GC
* ** * * * ***
666531 -CAAA-ACATATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGATGCAAGAAAAGCTTT
1 ATAAACACAT-TCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * * * *
666594 GCTTTCCACCGTTTTTTATAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * * * *
666659 CTAATGC-CCATTCTTTTCAAGATTAGACACC
127 ATAAT-CTCCATTCTTTTTAGGATTAGGCAGC
** * * * * * * * * *
666690 ATAAACGTAGTCTCCTCATTCGAATGCATCATAATGATGCTTTGGTTTTGCAAGAAAGGC-TTT-
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * * * *
666753 TTTCCCACCAATTTTTG-TAATGTCCAAGTTCGTGTCTCAAATGA-GAAAAACATGGATTCTAGT
66 TTTCCC-CC-ATTTTTGATAA-ATCAAAGTTTGTCTCTTAAAT-ACGACAAACATGAATTCTA-T
*** * *
666816 AA-AGATCTTTGTTCATTTT-GTGATTAGGTA-C
126 AATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** ** *
666847 TATAAACACATT-TTGCTCATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTT
1 -ATAAACACATTCTT-CTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * ** ** * * *
666911 TCTTTACCCTATTTTTCTTAAAATCAAAGTTAATC-CTTTAAATAAGGCAAGCATCG-ATTCTGA
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-A
* * *
666974 TAATAGTCTCCATTC-TTTTCGAGATT-GAGAAGC
125 TAATAATCTCCATTCTTTTTAG-GATTAG-GCAGC
* * * ** * *
667007 AAAAACACATTCTT-TTCATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * * *
667071 CTTTCCACCGTTTTTGACAAAATCAAAGTTTATCTTTTAAATACGACAAACAAGAATACTGATAA
65 CTTTCCCCCATTTTTGA-TAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAA
** * *
667136 TAATC-CCCGTCTTTTTAGGATTAGGTACC
128 TAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * *
667165 ATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGC-TTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * *
667229 -TTCCCCTCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATGGAA-TCCA
66 TTTCCCC-C-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAAT-ACGACAAACAT-GAATTCTA
* ** * * *
667289 GTAATGATCTTTATTC-ATTTGGTGATTTGGCA-C
125 -TAATAATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** * *
667322 TATAAACACATTCTCCTCATTAGGATGA-TTGATATTGATGATTTTCTTTTGCATGAAAATCTTT
1 -ATAAACACATTCTTCTTATTAGGAT-ACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
*** ** * ** * * * * *
667386 TCTAAGCCTTATTTTCCTTA-AAATCAAAGTTCATCTTTTAAATATGGCAAGCATCG-ATTCTCG
64 TCTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATACGACAAACAT-GAATTCT-A
* * * ** * *
667449 TAATAGTCTCCTTTCTTCTTAACATTGGGAAGC
125 TAATAATCTCCATTCTTTTTAGGATTAGGCAGC
* *** *
667482 A-AAAGCACATTC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTT
1 ATAAA-CACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * *
667545 TCTCTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * *
667610 CTAATCCCCATTCCTTTTAGGATTAGGCAGC
127 ATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * ** * * * *
667641 ATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAAGAAAGGCTTTTA
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * * *
667706 TATCACACCAATTTTTG-TAAAGTC-AAGTTCGTGC-CTCT-AATGA-GATAAATATGGATTCTA
66 TTTC-C-CCCATTTTTGATAAA-TCAAAGTTTGT-CTCT-TAAAT-ACGACAAACATGAATTCTA
* * *** * * *
667766 CAAAAGATCTTTTTTCATTTT-GTGAATAGGTA-C
125 TAATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * ** * ** ** * **
667799 TATAAACA-ATT-TTGCTCT-TCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATT
1 -ATAAACACATTCTT-CT-TATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTT
*** * ** * * * *
667861 TTC-TTCACTTTATTTTCCTTA-AAATCAAAGTTCATC-CTTTAA-ACAAACCAAGCTTCG-ATT
63 TTCTTTC-CCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATAC-GA-CAAACAT-GAATT
** * *
667921 CTCATAATAGCCTCCATTCTTGTTTA-GATTGGGAAGC
122 CT-ATAATAATCTCCATTCTT-TTTAGGATTAGGCAGC
* * * * * *
667958 A-AACACACATTC-CCTTTATTACGATCCATAAAATTGATGCTTTGG-TGT-CATCAGAAAAGCT
1 ATAA-ACACATTCTTC-TTATTAGGATACATGATATTGATGCTTTGGTTTTGCA--AGAAAAGCT
* * * * * * * *
668019 TTTCCTTCCACCGTTTTTTATAGAATCGAAGTTTGTTTTTTAAATACGACAAACATGAATACTCA
62 TTTCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-A
* * * *
668084 TACTAATCCCCGTT-TTTTTCAGGATTAGGCACC
125 TAATAATCTCCATTCTTTTT-AGGATTAGGCAGC
** * * * * * *
668117 ATAAACGTAGTCTT-TTGATTAGGATACATAATATTGATGCTTTGGCTTCGCAGGAAAGGC-TTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * ** *
668180 -TTTCCTACCAATTTTTG-TAAAGTCTAAGTTCGTGACTCAAATGA-GACAAACAT-AGATTCTA
65 CTTTCC--CCCATTTTTGATAAA-TCAAAGTTTGTCTCTTAAAT-ACGACAAACATGA-ATTCTA
* **
668241 GTAATGATCTTTATTC-TTTT-GGTCATTAGGCA-C
125 -TAATAATCTCCATTCTTTTTAGG--ATTAGGCAGC
* * ** * * * * * *
668274 TATAAACACATTCTCCTCAACAGGAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTT
1 -ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* ** * * ** * * *
668339 CTTTGCCTTATTTTCCTTA-AAATCTAAGTTCATC-CTTTAAATAAGGCAAGGC-TCG-ATTCTC
65 CTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTC-TTAAATACGACAA-ACAT-GAATTCT-
* *** * * *
668400 GTAACGGTCTCCATTCTTTTCATGATTTGG-ATGC
124 ATAATAATCTCCATTCTTTTTAGGATTAGGCA-GC
* ** * * * ***
668434 -CAAA-ACATATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGATGCAAGAAAAGCTTT
1 ATAAACACAT-TCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * * * *
668497 GCTTTCCACCGTTTTTTATAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * * * *
668562 CTAATGC-CCATTCTTTTCAAGATTAGACACC
127 ATAAT-CTCCATTCTTTTTAGGATTAGGCAGC
** * * * * * * * * *
668593 ATAAACGTAGTCTCCTCATTCGAATGCATCATAATGATGCTTTGGTTTTGCAAGAAAGGC-TTT-
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * * * *
668656 TTTCCCACCAATTTTTG-TAATGTCCAAGTTCGTGTCTCAAATGA-GAAAAACATGGATTCTAGT
66 TTTCCC-CC-ATTTTTGATAA-ATCAAAGTTTGTCTCTTAAAT-ACGACAAACATGAATTCTA-T
*** * *
668719 AA-AGATCTTTGTTCATTTT-GTGATTAGGTA-C
126 AATA-ATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** ** *
668750 TATAAACACATT-TTGCTCATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTT
1 -ATAAACACATTCTT-CTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * ** ** * * *
668814 TCTTTACCCTATTTTTCTTAAAATCAAAGTTAATC-CTTTAAATAAGGCAAGCATCG-ATTCTGA
64 TCTTTCCCCCATTTTTGAT-AAATCAAAGTTTGTCTC-TTAAATACGACAAACAT-GAATTCT-A
* * *
668877 TAATAGTCTCCATTC-TTTTCGAGATT-GAGAAGC
125 TAATAATCTCCATTCTTTTTAG-GATTAG-GCAGC
* * * ** * *
668910 AAAAACACATTCTT-TTCATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTT
1 ATAAACACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
* * * * * *
668974 CTTTCCACCGTTTTTGACAAAATCAAAGTTTATCTCTTAAATACGACAAACAAGAATACTGATAA
65 CTTTCCCCCATTTTTGA-TAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATAA
** * *
669039 TAATC-CCCGTCTTTTTAGGATTAGGTACC
128 TAATCTCCATTCTTTTTAGGATTAGGCAGC
* * * * *
669068 ATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGC-TTTC
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
* * * * *
669132 TTCCCCCCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATGGAA-TCCAG
66 TTTCCCCC-ATTTTTGATAAA-TCAAAGTTTGT-CTCTTAAAT-ACGACAAACAT-GAATTCTA-
* ** * * *
669193 TAATGATCTTTATTC-ATTTGGTGATTTGGCA-C
125 TAATAATCTCCATTCTTTTTAG-GATTAGGCAGC
* * * * ** * *
669225 TATAAACACATTCTCCTCATTAGGATGA-TTGATATTGATGATTTTCTTTTGCATGAAAATCTTT
1 -ATAAACACATTCTTCTTATTAGGAT-ACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
**** ** * ** * * * * *
669289 TCCAAGCCTTATTTTCCTTA-AAATCAAAGTTCATCTTTTAAATATGGCAAGCATCG-ATTCTCG
64 TCTTTCCCCCATTTT--TGATAAATCAAAGTTTGTCTCTTAAATACGACAAACAT-GAATTCT-A
* * * ** * *
669352 TAATAGTCTCCTTTCTTCTTAACATTGGGAAGC
125 TAATAATCTCCATTCTTTTTAGGATTAGGCAGC
* *** *
669385 A-AAAGCACATTC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTT
1 ATAAA-CACATTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTT
* * * * *
669448 TCTCTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATA
64 TCTTTCCCCCATTTTTGATA-AATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCT-ATA
* * *
669513 CTAATCCCCATTCCTTTTAGGATTAGGCAGC
127 ATAATCTCCATTCTTTTTAGGATTAGGCAGC
* * ** * * *
669544 ATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAAGAAAGGCTTTT
1 ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTT
669608 ATATCACACC
Statistics
Matches: 11066, Mismatches: 3414, Indels: 2241
0.66 0.20 0.13
Matches are distributed among these distances:
155 17 0.00
156 247 0.02
157 1142 0.10
158 3263 0.29
159 5523 0.50
160 653 0.06
161 208 0.02
162 12 0.00
163 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (157 bp):
ATAAACACATTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAAGCTTTTC
TTTCCCCCATTTTTGATAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATTCTATAATAA
TCTCCATTCTTTTTAGGATTAGGCAGC
Found at i:657044 original size:635 final size:633
Alignment explanation
Indices: 655942--657259 Score: 2009
Period size: 635 Copynumber: 2.1 Consensus size: 633
655932 GAAGCATGAC
* *
655942 ATTGATGCTTTGGTGTT-GTAAGAAAAGCTTTTTTTTCCACCGTTTTTGACAGAATCAAAGTTTG
1 ATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTTTTTCCACCATTTTTGACAGAATCAAAGTTTG
* * * * *
656006 TCTCCTAAATTCGACAAACAAGAATTCTGATAATAATCCCCGTTTTTTTAAGAATTAGGTACCAT
65 TCTCCTAAATACGACAAACAAGAATACTCATAATAATCCCCGTTTTTTTAAGAATTAGGCAACAT
*
656071 AAACATAGTCTTCTTATTAGGATACACAATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTCCC
130 AAACATAGTCTTCTTATTAGGATACACAATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTCCC
* * * * *
656136 CCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTCATGATCT
195 CCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAACGAGACAAACATGGAGTCCAGTAATAATCT
*
656201 TTATTCATTTAGTGATTTGGCACTATAAACACATACTCCTTATTAGGATAAAAGATATTGACGAT
260 TTATTCATTTAGTGATTTGGCACTATAAACACATACTCCTCATTAGGATAAAAGATATTGACGAT
* *
656266 TTTCTTTTGCATGGAAATCTTTTCCTAGCCCTATTTTCCTTAAAATCAAAATTTATCCTTTAAAT
325 TGTCTTTTGCATGGAAATCTTTTCCTAGCCCTATTTTCCTTAAAATCAAAATTCATCCTTTAAAT
* * *
656331 ATGGCAAGCATCGATTGTCGTAATTGTCTCCATTCTTTTTAACATTGGAAAGAAAAAACACATTC
390 ATGGCAAGCATCGATTCTCGTAATAGTCTCCATTCATTTTAACATTGGAAAGAAAAAACACATTC
* * * *
656396 CTTTCATTAGGATACATGACATTGATGCTTTGTTGTCGTAAGAAAAGCTGTTCTTTCCCCCATTT
455 CCTTCATTAGGATACATGACATTAATGCTTTGGTGTCGTAAGAAAAGCTGTTCTTTCCACCATTT
* *
656461 TTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACAT-ATACTAATCCCCGTTC
520 TTGATAGAATCAAAGTTTGTCTCTTAAACACGACAAACATGAATAC-TCATACTAATCCCCATTC
* *
656525 TTTTTAGGATTAGGCAGCATAAACATAGTCTTCTTATTATGATACATCAT
584 TTTTTAGGATTAGGCAACATAAACATAGTCTTCTTATTAGGATACATCAT
* *
656575 ATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGT
1 ATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTTTTTCCACCATTTTTGACAGAATCAAAGTTTGT
* * *
656640 CT-CTCAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTT-AGGATTAGGCAACA
66 CTCCT-AAATACGACAAACAAGAATACTCATAATAATCCCCGTT-TTTTTAAGAATTAGGCAACA
* **
656703 TAAACATAGTCTTCTTATTAGGGTACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTT
129 TAAACATAGTCTTCTTATTAGGATACACAATATTGATGCTTTGGTTTCGCAAGAAAGGC-TT-TT
*
656768 CCCCCCAATTTTTATAAAGTCTAAGTTTGTGCCTCAAACGAGACAAACATGGAGTCCAGTAATAA
192 CCCCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAACGAGACAAACATGGAGTCCAGTAATAA
* * * * *
656833 TCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGAATGATATTGAT
257 TCTTTATTCATTTAGTGATTTGGCACTATAAACACATACTCCTCATTAGGATAAAAGATATTGAC
* *
656898 GATTGTCTTTTGCA-GGAAAATCTTTT-CTGAGCCCTATTTTCCTTAAAATCAAAGTTCATCTTT
322 GATTGTCTTTTGCATGG-AAATCTTTTCCT-AGCCCTATTTTCCTTAAAATCAAAATTCATCCTT
* * * *
656961 TAAATATGGCGAGCATCGATTCTCGTAATAGTCTCCATTCATTTTAACGTTGGGAAGCAAAAACA
385 TAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCATTCATTTTAACATTGGAAAGAAAAAACA
* *
657026 CATTCCCTTCATTAGGATACATGACATTAATGCTTTGGTGTGGTAAGAAAAGCTTTTCTTTCCAC
450 CATTCCCTTCATTAGGATACATGACATTAATGCTTTGGTGTCGTAAGAAAAGCTGTTCTTTCCAC
* *
657091 CATTTTTGATAGAATCAAAGTTTGTCTCTTAAACACGACAAGCATGAATACTCATACTAATCCCT
515 CATTTTTGATAGAATCAAAGTTTGTCTCTTAAACACGACAAACATGAATACTCATACTAATCCCC
* *
657156 ATTCTTTTTTGGATTAGGCAACATAAATATAGTCTTCTTATTAGGATACATCAT
580 ATTCTTTTTAGGATTAGGCAACATAAACATAGTCTTCTTATTAGGATACATCAT
*
657210 ATTGATGCTTTGGGTTCGCAAGAAAAGCTTTTTTTTTCACACCAATTTTT
1 ATTGATGCTTTGGTTTCGCAAGAAAAGC-TTTTTTTTC-CACC-ATTTTT
657260 TTAAAGTCTA
Statistics
Matches: 619, Mismatches: 55, Indels: 17
0.90 0.08 0.02
Matches are distributed among these distances:
632 4 0.01
633 159 0.26
634 12 0.02
635 426 0.69
636 8 0.01
637 4 0.01
638 6 0.01
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (633 bp):
ATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTTTTTCCACCATTTTTGACAGAATCAAAGTTTGT
CTCCTAAATACGACAAACAAGAATACTCATAATAATCCCCGTTTTTTTAAGAATTAGGCAACATA
AACATAGTCTTCTTATTAGGATACACAATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTCCCC
CCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAACGAGACAAACATGGAGTCCAGTAATAATCTT
TATTCATTTAGTGATTTGGCACTATAAACACATACTCCTCATTAGGATAAAAGATATTGACGATT
GTCTTTTGCATGGAAATCTTTTCCTAGCCCTATTTTCCTTAAAATCAAAATTCATCCTTTAAATA
TGGCAAGCATCGATTCTCGTAATAGTCTCCATTCATTTTAACATTGGAAAGAAAAAACACATTCC
CTTCATTAGGATACATGACATTAATGCTTTGGTGTCGTAAGAAAAGCTGTTCTTTCCACCATTTT
TGATAGAATCAAAGTTTGTCTCTTAAACACGACAAACATGAATACTCATACTAATCCCCATTCTT
TTTAGGATTAGGCAACATAAACATAGTCTTCTTATTAGGATACATCAT
Found at i:657492 original size:476 final size:474
Alignment explanation
Indices: 656560--673187 Score: 15887
Period size: 476 Copynumber: 34.7 Consensus size: 474
656550 TAGTCTTCTT
* * * * * *
656560 ATTATGATACATCATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* *
656625 AGAATCAAAGTTTGTCTCTCAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
656690 GGATTAGGCAACATAAACATAGTCTTCTTATTAGGGTACATGATATTGATGCTTTGGTTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * * * *
656755 GAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAGTTTGTGCCTCAAACGAGACAAACATGG
196 GAAAGGCTTT-TTTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * *
656820 AGTCCAGTAATA-ATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGA
260 ATTCTAGTAA-AGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * * * *
656884 TGAATGATATTGATGATTGTCTTTTGCAGGAAAATCTTTTC-TGAGCCCTATTTTCCTTAAAATC
324 TAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATC
* * *
656948 AAAGTTCATCTTTTAAATATGGCGAGCATCGATTCTCGTAATAGTCTCCATTCATTTTAACG-TT
388 AAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTC-TTTTAA-GATT
657012 GGGAAGCAAAAACACATTCCCTTC
451 GGGAAGCAAAAACACATTCCCTTC
* * *
657036 ATTAGGATACATGACATTAATGCTTTGGTGTGGTAAGAAAAGCTTTTCTTTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
657101 AGAATCAAAGTTTGTCTCTTAAACACGACAAGCATGAATACTCATACTAATCCCTATTCTTTTTT
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
657166 GGATTAGGCAACATAAATATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGGTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * * *
657231 GAAAAGCTTTTTTTTTCACACCAATTTTTTTAAAGTCTAAGTTCGTGCCTCTAATGAGATAAACA
196 GAAAGGC---TTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
* * * * * *
657296 GGGATTCTAGTAAAGATATTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTCTCCTC-TCCA
257 TGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCAT-TA
* * * * * *
657359 GGATAAATAATATTGATGATTTTATTTTGCGTGGAAATCTATTCTTCACGTTATTTTCCTTAAAA
321 GGATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAA
* ** * * * *
657424 TCAAAGTTCAT-CTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCTTTTTAGATT
386 TCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTAAGATT
* * *
657488 GGGAAGCAAACACGCATTCCCTTT
451 GGGAAGCAAAAACACATTCCCTTC
* * * * *
657512 GTTAGGATCCATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * * * * *
657577 AAAATCAAAGTTTATCTCTTAAATATGACAAACATGAATACTCATACTAATTCTCGTTATTTTCA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* ** * * * * * *
657642 GGATTAGGCACCACAAACGCAATCTTCTCATTAGGATACATCATATTGACGCTTTGATTTTGCAG
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * * * * *
657707 GAAAGGCTTTTTTCCTACTAATTTTCGTAAATTCTAACTTCATGACTCAAATGAGACAAACATGG
196 GAAAGGCTTTTTTCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
657772 ATTTTAGTAATGATCTTCATTC-TTTTGGTCATTAGGCACTATAAACACATTCTCCTCAATAGGA
260 ATTCTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * * *
657836 TAAATGATATTGATGATTTTCTTTTGCAAGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCA
324 TAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCA
* * * * * *
657901 AAGTTCATCCTTTAAATAAGGCAAGCCTCGATTCCCGTAACAGTCCCCATTCTTTTCATGATTTG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGATTGG
* *
657966 GATA-CCAAAACACATTCCCCTC
453 GA-AGCAAAAACACATTCCCTTC
* * * * * * * *
657988 ATTAGGGTAAATGACGTTGATGCTTTGG-GATTGCAATAAAAGCTTTTCTTTCCAACATTTTTGA
1 ATTAGGATACATGACATTGATGCTTTGGTG-TCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGA
* * * *
658052 TAGAATCAAAGTTTGTCTCCTAAATATGACAAACTTGAATACTCATACTAATCCCCATTCTTTTC
65 TAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT
* * * * * * *
658117 AAGATTAGGCACTATAAACATAGTCTTCTCATTCA-AATACATCGTAATGATGCTTTGGTTTTGC
130 AGGATTAGGCACCATAAACATAGTCTTCTTATT-AGGATACATCATATTGATGCTTTGGTTTCGC
* * * * *
658181 CAGAAATGCTTTTTTCCCACCAATTTTCGTAAAGTCTAAATTCGTGTC-CAAATGAGACAAACAT
194 AAGAAAGGCTTTTTT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * * * * * * *
658245 AGATTCTAGTAAAGATCTTCATT-ATTTTTGTGATTAGGTACTACAAACACATTATGCTCATCAA
258 GGATTCTAGTAAAGATCTTTATTCA-TTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAG
* * * *
658309 GATAAATGATATTGATGATTTTATTTTGCTTGGAAATGTTTTCTTTATCC-TATTTTTCTTAAAA
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCTTATTTTCCTTAAAA
* * * *
658373 TCAAAGTTCATCTTTTAAGTAAGGCAAGCATCGATTCTCATAATTGTCTCCATTCTTTTCAAGAT
386 TCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGAT
* *
658438 TGAGAAGCAAAAACACATTTCCTTC
450 TGGGAAGCAAAAACACATTCCCTTC
* * * * * *
658463 ATTAGGATGCATGACATTGATGCTTCGGGGTTGTAAGAAAAGCTTTTCTTTCCTCCGTTTTTGAC
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * *
658528 AGAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACTAATAATAAT-CCCGTTTTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * * * *
658592 GCATTAGGTACCATAAACGTAGTCTTCTTATTAGGATACA-CGACATTGATGCTTTGGTTTCACA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCA
* * * *
658656 AGAAAGGCTTTCTTCTCC-CCAATTTTTATGAAGTCTAAGTTCTTGCCTCAAATGAGACAAACAA
195 AGAAAGGCTTT-TT-TCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
** * * * ** * * ***
658720 GGATTCTAGTAATTATCTTCATTCTTTTTTGGTCATTAGGCACTGCAAAGACATTCTTCTCAACG
258 GGATTCTAGTAAAGATCTTTATTC-ATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTA
* * * * *
658785 GGATAAATGATATTGATGATTTTTTTTTGCGTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAA
321 GGATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAA
* * ** * *
658850 TCAAAGTTTATCCTTTAAATAAGGCAAGCCTCGATTCTCGTAGCAATCTCCATTCTTTTCATGAT
386 TCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGAT
** *
658915 AT-GGATTCCAAAACACATTCCCTTC
450 -TGGGAAGCAAAAACACATTCCCTTC
** * * * *
658940 ATTAGGGCAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTCTTT-CACCCGTTTTTGA
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCA-CCGTTTTTGA
* * * *
659004 TAGAATGAAAGTTTGTCTCCTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTTTTC
65 TAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT
* * * * * * * * *
659069 AAGATTAGACACCATAAACATAGTCTTCTCATTCGAATACATCGTAATGATGCTTTGGTTTTGTA
130 AGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCA
* * * *
659134 AGAAAAGCTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGAAAAACATGG
195 AGAAAGGCTTTTTTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
659199 ATTCTAGTAAAGATCTTTCTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTCATTAGGAA
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
659264 AAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAA
* * *
659329 AGTTAATCCTTTAAATAAGGCAAGCATCGATTCT-GATAATAGTCTCCATTCTTTTCGAGATTGA
390 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCG-TAATAGTCTCCATTCTTTT-AAGATTGG
***
659393 GAAGCAAAAACACATTGTTTTC
453 GAAGCAAAAACACATTCCCTTC
* * * *
659415 ATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAC
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * * *
659480 AAAATCAAAGTTTATCTCTTAAATACGACAAACAAGAATACTGATAATAATCCCC-GTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
659544 GGATTAGGTACCATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
659609 GAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
196 GAAAGGCTTT-TTTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
659674 AATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
659739 GATTGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC-TAAGCCTTATTTTCCTTAAAATCA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATCA
* * * *
659803 AAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTTAACATTGG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGATTGG
* *
659868 GAAGCAAAAGCACATTCTCTTC
453 GAAGCAAAAACACATTCCCTTC
* * *
659890 ATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGC--TTCTCTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
659953 AGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATACTAATCCCCATTCCTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
660018 GGATTAGGCAGCATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * * *
660083 GAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTTGTGCCTCTAATGAGATAAATAT
196 GAAAGGCTTTT-T-TC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
** * * * * * *
660147 GGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTTTGCT-TTTCAG
258 GGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AG
** * * * * *
660210 GATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACGTTATTTTCCTTAAAAT
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
* ** * * * *
660275 CAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCTTGTTTAGATT
387 CAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGATT
* *
660340 GGGAAGCAAACACACATTCCCTTT
451 GGGAAGCAAAAACACATTCCCTTC
* * * * * * * *
660364 ATTACGATCCATAAAATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCGTTTTTTAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * *
660429 AGAATCGAAGTTTGTTTTTTAAATATGACAAACATGAATACTCATACTAATCCCCGTT-TTTTTC
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT-
* * * *
660493 AGGATTAGGCACCATAAACGTAGTCTT-TTGATTAGGATACATAATATTGATGCTTTGGCTTCAC
130 AGGATTAGGCACCATAAACATAGTCTTCTT-ATTAGGATACATCATATTGATGCTTTGGTTTCGC
* *
660557 AGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACAT
194 AAGAAAGGCTTTTTTCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * * * * **
660622 AGATTCTAGTAATGATCTTCATTC-TTTTGGTCATTAGGCACTATAAATACATTCTCCTCAAGAG
258 GGATTCTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAG
* ** *
660686 GAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
* ** *
660751 CTAAGTTCATCCTTTAAATAAGGCAAGGC-TCGATTCTCGTAACGGTCTCCATTCTTTTCATGAT
387 CAAAGTTCATCCTTTAAATAAGGCAA-GCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGAT
* * * * *
660815 TTGGATGCCAAAACATATCCCCTTC
450 TGGGAAGCAAAAACACATTCCCTTC
* * * * * * *
660840 ATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTGCTTTCCACCGTTTTTTAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * *
660905 AAAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCATTCTTTTCA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * * * * * * * *
660970 AGATTAGACACCATAAACATAGTCTTCTCATTCGAATACATCGTAATGATGCTTTGGTTTTGTAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
661035 GAAAAGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGAAAAACATGG
196 GAAAGGCTTTTTT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
661100 ATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTCATTAGGAA
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* *
661165 AAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCTTATTTTTCTTAAAATCAA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAA
* * *
661230 AGTTAATCCTTTAAATAAGGCAAGCATCGATTCT-GATAATAGTCTCCATTCTTTTCGAGATTGA
390 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCG-TAATAGTCTCCATTCTTTT-AAGATTGG
**
661294 GAAGCAAAAACACATTCTTTTC
453 GAAGCAAAAACACATTCCCTTC
* * * *
661316 ATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAC
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * * *
661381 AAAATCAAAGTTTATCTCTTAAATACGACAAACAAGAATACTGATAATAATCCCC-GTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
661445 GGATTAGGTACCATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
661510 GAAAGGCTTTCTTCCCCTCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
196 GAAAGGCTTTTTTCCAC-CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
661575 AATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
661640 GATTGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC-TAAGCCTTATTTTCCTTAAAATCA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATCA
* * * *
661704 AAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTTAACATTGG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGATTGG
* *
661769 GAAGCAAAAGCACATTCTCTTC
453 GAAGCAAAAACACATTCCCTTC
* * *
661791 ATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * *
661856 AGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACT-ATTACTAATCCCCATTCCTTTT
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCA-TACTAATCCCCATTCTTTTT
* * *
661920 AGGATTAGGCAGCATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCA
130 AGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCA
* * *
661985 AGAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAATGAGATAAATA
195 AGAAAGGCTTTT-T-TC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
** * * * * *
662049 TGGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTTTGCTC-TTCA
257 TGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-A
** * * * * *
662112 GGATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACGTTATTTTCCTTAAAA
321 GGATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAA
* ** * * * *
662177 TCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCTTGTTTAGAT
386 TCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGAT
* *
662242 TGGGAAGCAAACACACATTCCCTTT
450 TGGGAAGCAAAAACACATTCCCTTC
* * * * * * * * *
662267 ATTACGATCCATAAAATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCATTTTTTAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
662332 AGAATCGAAGTTTGTTTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTT-TTTTTC
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT-
* * * *
662396 AGGATTAGGCACCATAAACGTAGTCTT-TTGATTACGATACATAATATTGATGCTTTGGCTTCGC
130 AGGATTAGGCACCATAAACATAGTCTTCTT-ATTAGGATACATCATATTGATGCTTTGGTTTCGC
* *
662460 AGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACAT
194 AAGAAAGGCTTTTTTCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * * * **
662525 AGATTCTAGTAATGATCTTCATTC-TTTTGGTCATTAGGCACTATAAACACATTCTCCTCAACAG
258 GGATTCTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAG
* ** *
662589 GAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
* ** *
662654 CTAAGTTCATCCTTTAAATAAGGCAAGGC-TCGATTCTCGTAACGGTCTCCATTCTTTTCATGAT
387 CAAAGTTCATCCTTTAAATAAGGCAA-GCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGAT
* * * * *
662718 TTGGATGCCAAAACATATCCCCTTC
450 TGGGAAGCAAAAACACATTCCCTTC
* * * * * * *
662743 ATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTGCTTTCCACCGTTTTTTAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
662808 AGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCATTCTTTTCA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * * * * * * * *
662873 AGATTAGACACCATAAACATAGTCTTCTCATTCGAATACATCGTAATGATGCTTTGGTTTTGTAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
662938 GAAAAGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGAAAAACATGG
196 GAAAGGCTTTTTT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
663003 ATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTCATTAGGAA
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
663068 AAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAA
* * * *
663133 AGTTAATCCTTTAAATAAGGCAAGCATCGATTCT-GATAATAGTCTCTATTCTTTTCGAGATTGA
390 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCG-TAATAGTCTCCATTCTTTT-AAGATTGG
**
663197 GAAGCAAAAACACATTCTTTTC
453 GAAGCAAAAACACATTCCCTTC
* * * * *
663219 ATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACTGTTTTTGAC
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * * *
663284 AAAATCAAAGTTTATCTCTTAAATACGACAAACAAGAATACTGATAATAATCCCC-GTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
663348 GGATTAGGTACCATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
663413 GAAAGGCTTTCTTCCCCTCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
196 GAAAGGCTTTTTTCCAC-CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
663478 AATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
663543 GATTGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC-TAAGCCTTATTTTCCTTAAAATCA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATCA
* * * *
663607 AAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTTAACATTGG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGATTGG
* *
663672 GAAGCAAAAGCACATTCTCTTC
453 GAAGCAAAAACACATTCCCTTC
* * *
663694 ATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * *
663759 AGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACT-ATTACTAATCCCCATTCCTTTT
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCA-TACTAATCCCCATTCTTTTT
* * *
663823 AGGATTAGGCAGCATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCA
130 AGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCA
* * *
663888 AGAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAATGAGATAAATA
195 AGAAAGGCTTTT-T-TC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
** * * * * *
663952 TGGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTTTGCTC-TTCA
257 TGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-A
** * * * * *
664015 GGATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACGTTATTTTCCTTAAAA
321 GGATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAA
* ** * * * *
664080 TCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCTTGTTTAGAT
386 TCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGAT
* *
664145 TGGGAAGCAAACACACATTCCCTTT
450 TGGGAAGCAAAAACACATTCCCTTC
* * * * * * * *
664170 ATTACGATCCAT-AAATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCATTTTTTAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
664234 AGAATCGAAGTTTGTTTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTT-TTTTTC
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT-
* * * *
664298 AGGATTAGGCACCATAAACGTAGTCTT-TTGATTACGATACATAATATTGATGCTTTGGCTTCGC
130 AGGATTAGGCACCATAAACATAGTCTTCTT-ATTAGGATACATCATATTGATGCTTTGGTTTCGC
* *
664362 AGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACAT
194 AAGAAAGGCTTTTTTCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * * * **
664427 AGATTCTAGTAATGATCTTCATTC-TTTTGGTCATTAGGCACTATAAACACATTCTCCTCAACAG
258 GGATTCTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAG
* ** *
664491 GAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
* ** *
664556 CTAAGTTCATCCTTTAAATAAGGCAAGGC-TCGATTCTCGTAACGGTCTCCATTCTTTTCATGAT
387 CAAAGTTCATCCTTTAAATAAGGCAA-GCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGAT
* * * * *
664620 TTGGATGCCAAAACATATCCCCTTC
450 TGGGAAGCAAAAACACATTCCCTTC
* * * * * * *
664645 ATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTGCTTTCCACCGTTTTTTAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
664710 AGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCATTCTTTTCA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * * * * * * * *
664775 AGATTAGACACCATAAACATAGTCTTCTCATTCGAATACATCGTAATGATGCTTTGGTTTTGTAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
664840 GAAAAGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGAAAAACATGG
196 GAAAGGCTTTTTT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
664905 ATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTCATTAGGAA
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
664970 AAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAA
* * *
665035 AGTTAATCCTTTAAATAAGGCAAGCATCGATTCT-GATAATAGTCTCCATTCTTTTCGAGATTGA
390 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCG-TAATAGTCTCCATTCTTTT-AAGATTGG
**
665099 GAAGCAAAAACACATTCTTTTC
453 GAAGCAAAAACACATTCCCTTC
* * * *
665121 ATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAC
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * * * *
665186 AAAATCAAAGTTTATCTTTTAAATACGACAAACAAGAATACTGATAATAATCCCC-GTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
665250 GGATTAGGTACCATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
665315 GAAAGGCTTTCTTCCCCTCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
196 GAAAGGCTTTTTTCCAC-CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
665380 AATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
665445 GATTGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC-TAAGCCTTATTTTCCTTAAAATCA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATCA
* * * *
665509 AAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTTAACATTGG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGATTGG
* *
665574 GAAGCAAAAGCACATTCTCTTC
453 GAAGCAAAAACACATTCCCTTC
* * *
665596 ATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
665661 AGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATACTAATCCCCATTCCTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
665726 GGATTAGGCAGCATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
665791 GAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAATGAGATAAATAT
196 GAAAGGCTTTT-T-TC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
** * * * * *
665855 GGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTTTGCTC-TTCAG
258 GGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AG
** * * * * *
665918 GATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACTTTATTTTCCTTAAAAT
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
* ** * * * *
665983 CAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCTTGTTTAGATT
387 CAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGATT
* *
666048 GGGAAGCAAACACACATTCCCTTT
451 GGGAAGCAAAAACACATTCCCTTC
* * * * * * * *
666072 ATTACGATCCATAAAATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCGTTTTTTAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
666137 AGAATCGAAGTTTGTTTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTT-TTTTTC
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT-
* * *
666201 AGGATTAGGCACCATAAACGTAGTCTT-TTGATTAGGATACATAATATTGATGCTTTGGCTTCGC
130 AGGATTAGGCACCATAAACATAGTCTTCTT-ATTAGGATACATCATATTGATGCTTTGGTTTCGC
* *
666265 AGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACAT
194 AAGAAAGGCTTTTTTCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * * **
666330 AGATTCTAGTAATGATCTTTATTC-TTTTGGTCATTAGGCACTATAAACACATTCTCCTCAACAG
258 GGATTCTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAG
* ** *
666394 GAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
* ** *
666459 CTAAGTTCATCCTTTAAATAAGGCAAGGC-TCGATTCTCGTAACGGTCTCCATTCTTTTCATGAT
387 CAAAGTTCATCCTTTAAATAAGGCAA-GCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGAT
* * * * *
666523 TTGGATGCCAAAACATATCCCCTTC
450 TGGGAAGCAAAAACACATTCCCTTC
* * * * * *
666548 ATTAGGGTAAATGACATTGATGCTTTGGGGAT-GCAAGAAAAGCTTTGCTTTCCACCGTTTTTTA
1 ATTAGGATACATGACATTGATGCTTTGGTG-TCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGA
* * * *
666612 TAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCATTCTTTTC
65 TAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT
* * * * * * * * * *
666677 AAGATTAGACACCATAAACGTAGTCTCCTCATTCGAATGCATCATAATGATGCTTTGGTTTTGCA
130 AGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCA
* * * *
666742 AGAAAGGCTTTTTTCCCACCAATTTTTGTAATGTCCAAGTTCGTGTCTCAAATGAGAAAAACATG
195 AGAAAGGCTTTTTT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATG
* * * *
666807 GATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTCATTAGGA
259 GATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * *
666872 AAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATCA
324 TAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCA
* *
666937 AAGTTAATCCTTTAAATAAGGCAAGCATCGATTCT-GATAATAGTCTCCATTCTTTTCGAGATTG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCG-TAATAGTCTCCATTCTTTT-AAGATTG
* **
667001 AGAAGCAAAAACACATTCTTTTC
452 GGAAGCAAAAACACATTCCCTTC
* * * *
667024 ATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAC
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * * * *
667089 AAAATCAAAGTTTATCTTTTAAATACGACAAACAAGAATACTGATAATAATCCCC-GTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
667153 GGATTAGGTACCATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
667218 GAAAGGCTTTCTTCCCCTCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
196 GAAAGGCTTTTTTCCAC-CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
667283 AATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
667348 GATTGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC-TAAGCCTTATTTTCCTTAAAATCA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATCA
* * * *
667412 AAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTTAACATTGG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGATTGG
* *
667477 GAAGCAAAAGCACATTCTCTTC
453 GAAGCAAAAACACATTCCCTTC
* * *
667499 ATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
667564 AGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATACTAATCCCCATTCCTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
667629 GGATTAGGCAGCATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
667694 GAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAATGAGATAAATAT
196 GAAAGGCTTTT-T-TC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
** * * * * *
667758 GGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTTTGCTC-TTCAG
258 GGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AG
** * * * * *
667821 GATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACTTTATTTTCCTTAAAAT
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
* ** * * * *
667886 CAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCTTGTTTAGATT
387 CAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGATT
* *
667951 GGGAAGCAAACACACATTCCCTTT
451 GGGAAGCAAAAACACATTCCCTTC
* * * * * * * *
667975 ATTACGATCCATAAAATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCGTTTTTTAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
668040 AGAATCGAAGTTTGTTTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTT-TTTTTC
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT-
* * *
668104 AGGATTAGGCACCATAAACGTAGTCTT-TTGATTAGGATACATAATATTGATGCTTTGGCTTCGC
130 AGGATTAGGCACCATAAACATAGTCTTCTT-ATTAGGATACATCATATTGATGCTTTGGTTTCGC
* *
668168 AGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACAT
194 AAGAAAGGCTTTTTTCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * * **
668233 AGATTCTAGTAATGATCTTTATTC-TTTTGGTCATTAGGCACTATAAACACATTCTCCTCAACAG
258 GGATTCTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAG
* ** *
668297 GAAAAATGATATTGATGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
* ** *
668362 CTAAGTTCATCCTTTAAATAAGGCAAGGC-TCGATTCTCGTAACGGTCTCCATTCTTTTCATGAT
387 CAAAGTTCATCCTTTAAATAAGGCAA-GCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGAT
* * * * *
668426 TTGGATGCCAAAACATATCCCCTTC
450 TGGGAAGCAAAAACACATTCCCTTC
* * * * * *
668451 ATTAGGGTAAATGACATTGATGCTTTGGGGAT-GCAAGAAAAGCTTTGCTTTCCACCGTTTTTTA
1 ATTAGGATACATGACATTGATGCTTTGGTG-TCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGA
* * * *
668515 TAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCATTCTTTTC
65 TAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT
* * * * * * * * * *
668580 AAGATTAGACACCATAAACGTAGTCTCCTCATTCGAATGCATCATAATGATGCTTTGGTTTTGCA
130 AGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCA
* * * *
668645 AGAAAGGCTTTTTTCCCACCAATTTTTGTAATGTCCAAGTTCGTGTCTCAAATGAGAAAAACATG
195 AGAAAGGCTTTTTT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATG
* * * *
668710 GATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTCATTAGGA
259 GATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * *
668775 AAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATCA
324 TAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCA
* *
668840 AAGTTAATCCTTTAAATAAGGCAAGCATCGATTCT-GATAATAGTCTCCATTCTTTTCGAGATTG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCG-TAATAGTCTCCATTCTTTT-AAGATTG
* **
668904 AGAAGCAAAAACACATTCTTTTC
452 GGAAGCAAAAACACATTCCCTTC
* * * *
668927 ATTAGGATGCATGAGATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAC
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * * *
668992 AAAATCAAAGTTTATCTCTTAAATACGACAAACAAGAATACTGATAATAATCCCC-GTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
669056 GGATTAGGTACCATAAACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
669121 GAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
196 GAAAGGCTTT-TTTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
669186 AATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGAT
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * **
669251 GATTGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC-CAAGCCTTATTTTCCTTAAAATCA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATCA
* * * *
669315 AAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTTAACATTGG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTT-TTAAGATTGG
* *
669380 GAAGCAAAAGCACATTCTCTTC
453 GAAGCAAAAACACATTCCCTTC
* * *
669402 ATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * *
669467 AGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATACTAATCCCCATTCCTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
669532 GGATTAGGCAGCATAAACATAGTCTTCTTATTAGGATACATCTTATTGATGCTTTGGGTTCGCAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
669597 GAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAATGAGATAAATAT
196 GAAAGGCTTTT-T-TC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
** * * * * *
669661 GGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTTTGCTC-TTCAG
258 GGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AG
** * * * * *
669724 GATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACGTTATTTTCCTTAAAAT
322 GATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
** * *
669789 CAAAGTTCATCCTTTTTCATTTTGTGAATTGGTACTATAAACAATTCTG-CTCTTCAGGATAAAT
387 CAAAGTTCATCC--TTT-A---AAT-AA--GG--C---AAGC-A-TC-GATTC-TC--G-T-AAT
* * ** ** * * * ** * * *
669853 AATATTGATGATTTT-A-TTCTGTG-TGC---AATTCTTTTCTTCTC
430 AGTCTCCATTCTTTTAAGAT-TGGGAAGCAAAAACACATTCCCT-TC
* *** * * * * ** * ** ** *
669894 GTTATTTTCCTTAAAATCAAAG--TTCATCCCGTAAACAAACCAAGCTTCGATTCTCATAATAGC
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGT-AA-GAA--AAGC-T---TT-TC-T--T---
* * * * *** * * * * *
669957 CTCCATTCTTTTTTAGATTGGGAAGTGAACACACAT-TCCCTTTATTAGGATCCATAAAATTG-A
51 -TCCA-CCGTTTTT-GA-T-AGAA-TCAA-A-GTTTGTCTCTTAAATACGA--CA-AACA-TGAA
* * *** ** ** ** ** * * *
670020 TGCTTTGGTGTCATTA-GAAAAGCTTTTCTTTCCACCATT---TTCGATAAAATCAAAGTTTGTC
104 TAC-------TCA-TACTAATCCCCATTCTTTTTAGGATTAGGCACCAT-AAA-CATAGTCT-TC
* * * * * * * * * ** * * *
670081 TCTCAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGC-----AC
158 T-T--ATTA-G-GATACAT-CATATTGATGCT--T---TGGT-TTCGCAAGA-AAGGCTTTTTTC
* *** * ** ** * * * * ** * * *
670141 CACAAACAATAGT--CTTCT-CCTTAGGATACATCATATTGATG-C---TTTGGTTTCGCAGGAA
210 CACCAATTTTTGTAAAGTCTAAGTT-CG-TGCCTCA-AATGA-GACAAACATGGATTC-TAGTAA
* * * * * ** * * **** * *
670199 AGGCTTTTTTCTTACCAATTTTCGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATAGATT
270 A-G-ATCTTTATT--C-ATTTT-GT-GA-T-TAGGCAC-T-A-T-AAA-CACATTCTCCT-CATT
* * * ** ** ** * * *
670264 CTGG-T-AATGATCTTCATTCTTTTGGTCATTAGGCACT-ATAAA-CACATTC--T-CCTCAATA
320 -AGGATAAATGATATTGA-TGATTT--T-ATTTTGCA-TGA-AAATC-TTTTCTTTACCTTATTT
*** * ** * * * ** ** *** * * * *
670322 GGATAAATGATATTGATGATT-TTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAA
377 TCCTTAA--A-ATCAAAG-TTCATCCTTTAAAT--AAGGC-AAGC-AT---CGATTCT-CGT--A
* ** * * *
670386 ATCAAAGT-T-CA-TCCTTTAA-A-T---AAGGC-AAGCCTCGATTCTCGT-
428 AT---AGTCTCCATTCTTTTAAGATTGGGAA-GCAAAAACAC-ATTCCCTTC
** **** * * * * * * * * **
670428 AACAGTCCCCAT-TCTTTTCATGATTTGGATG-C-CAA-AACA-C-ATTC---CC-CTC-ATTAG
1 ATTAGGATACATGAC-ATTGATGCTTTGG-TGTCGTAAGAAAAGCTTTTCTTTCCAC-CGTTTTT
* * * ** * * * * *
670482 GGTA-AATGACA--TTGATGCT-TTGAGGT-TG-CAAGA-A--AA-GCT-TTTCT-TTCCACCAT
63 GATAGAATCAAAGTTTG-T-CTCTT-AAATACGACAA-ACATGAATACTCATACTAATCC-CCAT
* * * * * * ** * * *
670535 T-TTTGATAGAATAAAAGTTTGTCTCC-TAAATAT-GACAAAC--A-T-GAATAC-TCATACTAA
123 TCTTT-TTAGGAT--TAG---G-CACCATAAACATAGTC-TTCTTATTAGGATACATCATATTGA
* ** * * *** * ** ** *
670592 TCCCCGTTCTTTTCAAGATTAGGCACCATAAA-GATAATATTCTTATTCGAATACATCATAATGA
180 T----G--C-TTT---GGTTTCGCA--AGAAAGGCT--T-TT-TTCCACCAAT-TTTTGTAAAG-
** * *** *** * * * * * *
670656 TGCTTTGGTT-TTGCAAGAAATGCTTTTTTTCTCACCA-AG-TT-TTGTAAAG-TC-TAAGTTCG
227 T-C-TAAGTTCGTGCCTCAAATG-----AGAC-AAACATGGATTCTAGTAAAGATCTTTA-TTCA
* ** * * * *
670715 TGCCTTAAATGAGACCAACATGG-ATTCTAGTAAAGATC-TTCAT--TCATTTTGTGAT-TAGGT
283 T---TT---TGTG---ATTA-GGCA--CTA-TAAACA-CATTC-TCCTCA-TTAG-GATAAATG-
** * ** ** * * * ** * **
670775 ACTATAAACGCATTCTGCTCAT-CAGGATAAATGATATTGATGATTTTATTTTGCATGAAAATAT
330 A-TATTGATG-ATT-TTATTTTGCATGA-AAAT-CTTTTCTTTACCTTA--TT------------
* * * *
670839 TTTCTTTACCCTATTTTTCTTAAAATCAAAGTTAATCCCTTAAATAAGGCAAGCATCAATTCTCA
376 -----TT---C-------CTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCG
* * * *
670904 TAACT-CTCTCCATTCTTTCCAAGATTGAGAAGCAAAAACACATTTCCTTC
426 TAA-TAGTCTCCATTCTTT-TAAGATTGGGAAGCAAAAACACATTCCCTTC
* ** * * * *
670954 TTTAGGATGTATGACATTGATGCTTTGGCGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGAC
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * *
671019 AGAATCAAAGTTTGTCTCTTAAATACAACAAATAAGAATAATGATACTAAT-CCCATT-TTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* *
671082 GGATTAGGTACCATAAACATAGTCTTCTTATTCGGATACA-CGATATTGATGCTTTGGTTTCGCA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATC-ATATTGATGCTTTGGTTTCGCA
* * * * *
671146 AGAAAAGCTTTATTCCGCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATA
195 AGAAAGGCTTTTTTCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATG
* * * * *
671211 GATTCTAGTAATGATCTTCATTC-TTTTGGTCATTAGGCACTATAAACATATTCTCCTCAATAGG
259 GATTCTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* * * * * *
671275 ATAAAGGATATTGATGATTTTTTTTTGTATGGAAATCTTTT-TTGTGCCCTATTTTCCTTAAAAT
323 ATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTT-TACCTTATTTTCCTTAAAAT
* * * * ** *
671339 CAAAGTTGATCCTTTAAATAAGGCAAGCCTTGATTCTCATAGCAGTCTCCATTCTTTTCATGATT
387 CAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGATT
* * *
671404 TGGATGCCAAAACACATTCCCTTC
451 GGGAAGCAAAAACACATTCCCTTC
** * * * * **
671428 ATTAGGGCAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTTTTGC-CCGTTTTTTT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTC-TTTCCACCGTTTTTGA
* * * * *
671491 TAGAATCAAAGTTTGTCTCTCAAATATGACAAACATTAATTCTCATACTAATCCCCATTCTTTTC
65 TAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTT
* * * * ** * * * * *
671556 AAGATTAGACACTATAAACATAGTCTCCTCGTTCGAATACATCATAATGATGCTTTGGTTTTGTA
130 AGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCA
* * * * *
671621 AGAAAAGCTTTTTTCCCACCAATTTTTGTGAAGTCTATGTTCGTGCCTTAAATGAGACAAACAGG
195 AGAAAGGCTTTTTT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATG
** * * * *
671686 GATTCTAGTAAAGATCTTCGTCCATTTTGTGATTAGGTACTATAAACACATTCTGCTCGTTAGGA
259 GATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * *
671751 TAAATGATATTGATGATTTTATTTTGTATGAAAATCTTTTCTTTGCCCTATTTTTCTTAAAATCA
324 TAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCA
* * * * * *
671816 AAGTTAATCCTTTAAAAAAGGCAAGCATCAATTCTCATAACAGTCTCCATTCTTTTCAAGATTGA
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTT-AAGATTGG
*
671881 GAAGCAAAAACACATTTCCTTC
453 GAAGCAAAAACACATTCCCTTC
* *** * **
671903 ATTAGGATGCATGACATTGATGCTTTGCCATCGTAAGAAAAGCTTTTCTTTCCCCCAATTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * *
671968 AGAATCAAAGTTTGTCTCTTAAAAATGACAAAAATGAATACTCATACTAATCCTCGTTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * *
672033 GGATTACGCAACATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCACAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * * *
672098 GAAAGGCTTTTTTTTCACACCAATTTTTGTAATGTCTAAGTTCGTGCCTCTAATGAGATAAACTT
196 GAAAGGC--TTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * *
672163 GGATTCTAGTAAAGATCGTTT-TTCATTTTTTGAATAGGTACTATAAACA-ATTCTCCTC-TTCA
258 GGATTCTAGTAAAGATC-TTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-A
* * **
672225 GGATAAATGATATTGATCATTTTATTTTGCATGGAAATCTTTTCTTTATGTTATTTTCCTTAAAA
321 GGATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAA
* ** * * * *
672290 TCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCTTTTTAAGAT
386 TCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTC-TTTTAAGA-
* * *
672355 TTGGGAAGCGAACACATATTTCCCTT-
449 TTGGGAAGCAAAAACACA-TTCCCTTC
* * * *
672381 GTTAGGATACATGAAATTGATGC-TTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * *
672445 AAAATCAAAGTTTGTCACTTAAATACGACAAACATGAATACTAATACTAATCCCCATTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * ** ** * * *
672510 GGATTAGGCACCACAAACATAGTATTCTCCTTAGGATATGTCATATTGACGCTTTGGTTTTGCAG
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * * * *
672575 GAAAGGCTTTCTTCCCCCTAATTTTTATAAAGTCTAAGTTCGTGCCTCAGATGCGACAAACATGG
196 GAAAGGCTTTTTTCCACC-AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * * *
672640 AATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCACATTAGGAT
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * * *
672705 GAATGATATTGATGACTTTCTTTTACATGAAAATCTTTTC-TGAGCCCTATTTTCCTTAAAATCA
325 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATCA
* *
672769 AAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTGG
389 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTC-TTTTAAGATTGG
672834 GAAGCAAAAACACATTCCCTTC
453 GAAGCAAAAACACATTCCCTTC
* *
672856 ATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
*
672921 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTCA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
* * * * * * * * *
672986 AGATTAGACACCATAAACGTAGTCTTCTCATTTGAATACATCATAATGATGCTTTGGTTTTGTAA
131 GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* *
673051 GAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATCAGACAAACATGG
196 GAAAGGCTTTTTT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
673116 ATTCTAGTAAAGATCTTCATTCATTTTGTGATTACGG-ACCATAAACACATTTTGCTCTTTAGGA
260 ATTCTAGTAAAGATCTTTATTCATTTTGTGATTA-GGCACTATAAACACATTCTCCTCATTAGGA
*
673180 CAAATGAT
324 TAAATGAT
673188 GAAAACCAAG
Statistics
Matches: 13110, Mismatches: 2524, Indels: 1036
0.79 0.15 0.06
Matches are distributed among these distances:
472 6 0.00
473 243 0.02
474 798 0.06
475 4002 0.31
476 5785 0.44
477 1031 0.08
478 359 0.03
479 103 0.01
481 1 0.00
482 1 0.00
483 8 0.00
484 3 0.00
485 5 0.00
486 1 0.00
487 5 0.00
488 9 0.00
489 9 0.00
490 12 0.00
491 8 0.00
492 19 0.00
493 3 0.00
494 9 0.00
495 7 0.00
496 9 0.00
497 15 0.00
498 6 0.00
499 9 0.00
500 20 0.00
501 21 0.00
502 7 0.00
503 17 0.00
504 22 0.00
505 10 0.00
506 15 0.00
507 14 0.00
508 15 0.00
509 8 0.00
510 6 0.00
511 8 0.00
512 12 0.00
513 4 0.00
514 2 0.00
515 6 0.00
516 7 0.00
517 4 0.00
518 3 0.00
519 11 0.00
520 14 0.00
521 15 0.00
522 29 0.00
523 12 0.00
524 9 0.00
525 27 0.00
526 29 0.00
527 26 0.00
528 26 0.00
529 11 0.00
530 16 0.00
531 6 0.00
532 7 0.00
533 13 0.00
534 32 0.00
535 33 0.00
536 14 0.00
537 17 0.00
538 9 0.00
539 16 0.00
540 11 0.00
541 17 0.00
542 6 0.00
543 12 0.00
544 4 0.00
545 6 0.00
546 13 0.00
547 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (474 bp):
ATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTA
GGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
GAAAGGCTTTTTTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
TTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
AATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAA
GTTCATCCTTTAAATAAGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTAAGATTGGGAA
GCAAAAACACATTCCCTTC
Found at i:658752 original size:952 final size:950
Alignment explanation
Indices: 656575--673187 Score: 18902
Period size: 951 Copynumber: 17.3 Consensus size: 950
656565 GATACATCAT
* * *
656575 ATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
656640 CTCTCAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAACATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* *
656705 AACATAGTCTTCTTATTAGGGTACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCC
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* * * * *
656770 CCCCAATTTTTATAAAGTCTAAGTTTGTGCCTCAAACGAGACAAACATGGAGTCCAGTAATAATC
196 CCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATC
* * * *
656835 TTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGAATGATATTGATGA
261 TTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGA
* * ** * *
656900 TTGTCTTTTGCAGGAAAATCTTTTCTGAGCCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAA
326 TTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAA
* * * * * * * *
656965 TATGGCGAGCATCGATTCTCGTAATAGTCTCCATTCATTTTAACG-TTGGGA-AGCAAAAACACA
391 TAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTC-TTTTCATGATTTGGATA-CCAAAACACA
* * * * *
657028 TTCCCTTCATTAGGATACATGACATTAATGCTTTGGTGTGGTAAGAAAAGCTTTTCTTTCCACCA
454 TTCCCTTCATTAGGGTAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTTTCCACCA
* * * *
657093 TTTTTGATAGAATCAAAGTTTGTCTCTTAAACACGACAAGCATGAATACTCATACTAATCCCTAT
518 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCAT
*** * * * * *
657158 TCTTTTTTGGATTAGGCAACATAAATATAGTCTTCTTATT-AGGATACATCATATTGATGCTTTG
583 TCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCA-AATACATCATAATGATGCTTTG
* * * * * *
657222 GGTTCGCAAGAAAAGCTTTTTTTTTCACACCAATTTTTTTAAAGTCTAAGTTCGTGCCTCTAATG
647 GTTTTGCAAGAAAGGC---TTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATG
* * * *
657287 AGATAAACAGGGATTCTAGTAAAGATATTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTCT
709 AGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTT
* * * * * * *
657351 CCTC-TCCAGGATAAATAATATTGATGATTTTATTTTGCGTGGAAATCTATTCTTCACGTTATTT
774 GCTCAT-CAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTAC-CTATTT
* * ** * *
657415 TCCTTAAAATCAAAGTTCAT-CTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCT
837 TTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCT
* * * * * ** *
657479 TTT-TAGATTGGGAAGCAAACACGCATTCCCTTTGTTAGGATCCATGAA
902 TTTCGAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
* * * *
657527 ATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTAT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * * * * *
657592 CTCTTAAATATGACAAACATGAATACTCATACTAATTCTCGTTATTTTCAGGATTAGGCACCACA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
** * * * * * * *
657657 AACGCAATCTTCTCATTAGGATACATCATATTGACGCTTTGATTTTGCAGGAAAGGCTTT-TT-T
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* ** * * * * *
657720 CCTACTAATTTTCGTAAATTCTAACTTCATGACTCAAATGAGACAAACATGGATTTTAGTAATGA
196 CC--CCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGA
* *
657785 TCTTCATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGAT
259 TCTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
* * *
657850 GATTTTCTTTTGCAAGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCATCCTTTA
324 GATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTA
* *
657915 AATAAGGCAAGCCTCGATTCCCGTAACAGTCCCCATTCTTTTCATGATTTGGATACCAAAACACA
389 AATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACACA
* * * *
657980 TTCCCCTCATTAGGGTAAATGACGTTGATGCTTTGGGATTGCAATAAAAGCTTTTCTTTCCAACA
454 TTCCCTTCATTAGGGTAAATGACATTGATGCTTTGGG-TTGCAAGAAAAGCTTTTCTTTCCACCA
* *
658045 TTTTTGATAGAATCAAAGTTTGTCTCCTAAATATGACAAACTTGAATACTCATACTAATCCCCAT
518 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCAT
* *
658110 TCTTTTCAAGATTAGGCACTATAAACATAGTCTTCTCATTCAAATACATCGTAATGATGCTTTGG
583 TCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTGG
* * * * * *
658175 TTTTGCCAGAAATGCTTTTTTCCCACCAATTTTCGTAAAGTCTAAATTCGTGTC-CAAATGAGAC
648 TTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGAT
* ** * *
658239 AAACATAGATTCTAGTAAAGATCTTCATT-ATTTTTGTGATTAGGTACTACAAACACATTATGCT
713 AAACATGGATTCTAGTAAAGATCTTTTTTCA-TTTTGTGATTAGGTACTATAAACACATTTTGCT
* * *
658303 CATCAAGATAAATGATATTGATGATTTTATTTTGCTTGGAAATGTTTTCTTTATCCTATTTTTCT
777 CATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTA-CCTATTTTTCT
* * *
658368 TAAAATCAAAGTTCATCTTTTAAGTAAGGCAAGCATCGATTCTCATAATTGTCTCCATTCTTTTC
841 TAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTC
* *
658433 AAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAC
906 GAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
* * * * *
658478 ATTGATGCTTCGGGGTTGTAAGAAAAGCTTTTCTTTCCTCCGTTTTTGACAGAATCAAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
658543 CTCTTAAATACGACAAACAAGAATACTAATAATAAT-CCCGTTTTTTTTAGCATTAGGTACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* * * *
658607 AACGTAGTCTTCTTATTAGGATACACGACATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCT
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* * * *
658672 CCCCAATTTTTATGAAGTCTAAGTTCTTGCCTCAAATGAGACAAACAAGGATTCTAGTAATTATC
196 CCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATC
* ** * * ***
658737 TTCATTCTTTTTTGGTCATTAGGCACTGCAAAGACATTCTTCTCAACGGGATAAATGATATTGAT
261 TTTATTC--TTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
* * * * *
658802 GATTTTTTTTTGCGTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTTATCCTTTA
324 GATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTA
* * * *
658867 AATAAGGCAAGCCTCGATTCTCGTAGCAATCTCCATTCTTTTCATGATATGGATTCCAAAACACA
389 AATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACACA
*
658932 TTCCCTTCATTAGGGCAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTCTTT-CACCC
454 TTCCCTTCATTAGGGTAAATGACATTGATGCTTT-GGGTTGCAAGAAAAGCTTTTCTTTCCA-CC
* * *
658996 GTTTTTGATAGAATGAAAGTTTGTCTCCTAAATATGACAAACATGAATACTCATACTAATCCCCA
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCA
* * *
659061 TTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTCGAATACATCGTAATGATGCTTTG
582 TTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTG
* * *
659126 GTTTTGTAAGAAAAGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGA
647 GTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
* *
659190 AAAACATGGATTCTAGTAAAGATCTTTCTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
712 TAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
* *
659255 CATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCT
777 CATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTA-CCTATTTTTCT
* *
659320 TAAAATCAAAGTTAATCCTTTAAATAAGGCAAGCATCGATTCTGATAATAGTCTCCATTCTTTTC
841 TAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTC
* *
659385 GAGATTGAGAAGCAAAAACACATTGT-TTTCATTAGGATGCATGAG
906 GAGATTGAGAAGCAAAAACACATT-TCCTTCATTAGGATGCATGAA
* * * *
659430 ATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTAT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
659495 CTCTTAAATACGACAAACAAGAATACTGATAATAATCCCCG-TCTTTTTAGGATTAGGTACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* *
659559 AACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGCTTTCTTCC
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* *
659624 CCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAATCCAGTAATGATC
196 CCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATC
* * * * *
659689 TTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGATTGATATTGATGA
261 TTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGA
** *
659754 TTTTCTTTTGCATGAAAATCTTTTCTAAGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAAA
326 TTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAA
* * * * ** * *
659819 TATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTT-AACATTGGGA-AGCAAAAGCACA
391 TAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTT-TTCATGATTTGGATACCAAAA-CACA
* * * ** * *
659882 TTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGC--TTCTCTCCACCA
454 TTCCCTTCATTAGGGTAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTTTCCACCA
* * *
659945 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATACTAATCCCCAT
518 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCAT
* * * * * *
660010 TCCTTTT-AGGATTAGGCAGCATAAACATAGTCTTCTTATT-AGGATACATCTTATTGATGCTTT
583 T-CTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCA-AATACATCATAATGATGCTTT
* * * * *
660073 GGGTTCGCAAGAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTTGTGCCTCTAATG
646 GGTTTTGCAAGAAAGGCTTTT-T-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATG
* ** *
660137 AGATAAATATGGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTTT
709 AGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTT
** ** * * * * *
660201 GCTTTTCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACGTTATTTT
774 GCTCATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTAC-CTATTTT
* * ** * *
660266 CCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCTT
838 TCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTT
* * * * * * * *
660331 GTT-TAGATTGGGAAGCAAACACACATTCCCTTTATTACGATCCATAAA
903 -TTCGAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
* * * * *
660379 ATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCGTTTTTTATAGAATCGAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * * *
660444 TTTTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTTTTTTCAGGATTAGGCACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* * * * *
660509 AACGTAGTCTT-TTGATTAGGATACATAATATTGATGCTTTGGCTTCACAGGAAAGGCTTT-TT-
131 AACATAGTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTC
* * *
660571 TCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATAGATTCTAGTAATG
195 TCC--CCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATG
* * ** *
660636 ATCTTCATTCTTTTGGTCATTAGGCACTATAAATACATTCTCCTCAAGAGGAAAAATGATATTGA
258 ATCTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGA
* *
660701 TGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCTAAGTTCATCCTTT
323 TGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTT
* * * *
660766 AAATAAGGCAAGGCTCGATTCTCGTAACGGTCTCCATTCTTTTCATGATTTGGATGCCAAAACAT
388 AAATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACAC
* *
660831 ATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTGCTTTCCACC
453 ATTCCCTTCATTAGGGTAAATGACATTGATGCTTT-GGGTTGCAAGAAAAGCTTTTCTTTCCACC
* * * * *
660896 GTTTTTTATAAAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCA
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCA
* * *
660961 TTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTCGAATACATCGTAATGATGCTTTG
582 TTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTG
* * *
661026 GTTTTGTAAGAAAAGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGA
647 GTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
* *
661091 AAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
712 TAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
* *
661156 CATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCTTATTTTTCT
777 CATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACC-TATTTTTCT
* *
661221 TAAAATCAAAGTTAATCCTTTAAATAAGGCAAGCATCGATTCTGATAATAGTCTCCATTCTTTTC
841 TAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTC
* *
661286 GAGATTGAGAAGCAAAAACACA-TTCTTTTCATTAGGATGCATGAG
906 GAGATTGAGAAGCAAAAACACATTTC-CTTCATTAGGATGCATGAA
* * * *
661331 ATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTAT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
661396 CTCTTAAATACGACAAACAAGAATACTGATAATAATCCCCG-TCTTTTTAGGATTAGGTACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
*
661460 AACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGCTTTCTTC-
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* *
661524 CCCTCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAATCCAGTAATGAT
196 CCC-CAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGAT
* * * * *
661589 CTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGATTGATATTGATG
260 CTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATG
** *
661654 ATTTTCTTTTGCATGAAAATCTTTTCTAAGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAA
325 ATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAA
* * * * ** * *
661719 ATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTT-AACATTGGGA-AGCAAAAGCAC
390 ATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTT-TTCATGATTTGGATACCAAAA-CAC
* * * ** * *
661782 ATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACC
453 ATTCCCTTCATTAGGGTAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTTTCCACC
* *
661847 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACT-ATTACTAATCCCC
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCA-TACTAATCCCC
* * * * * *
661911 ATTCCTTTT-AGGATTAGGCAGCATAAACATAGTCTTCTTATT-AGGATACATCTTATTGATGCT
581 ATT-CTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCA-AATACATCATAATGATGCT
* * * *
661974 TTGGGTTCGCAAGAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAA
644 TTGGTTTTGCAAGAAAGGCTTTT-T-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA
* ** *
662038 TGAGATAAATATGGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATT
707 TGAGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATT
* ** * * * * *
662102 TTGCTCTTCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACGTTATT
772 TTGCTCATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTAC-CTATT
* * ** * *
662167 TTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTC
836 TTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTC
* * * * * * * *
662232 TTGTT-TAGATTGGGAAGCAAACACACATTCCCTTTATTACGATCCATAAA
901 TT-TTCGAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
* * * * * *
662282 ATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCATTTTTTATAGAATCGAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
662347 TTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTTCAGGATTAGGCACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* * * * *
662412 AACGTAGTCTT-TTGATTACGATACATAATATTGATGCTTTGGCTTCGCAGGAAAGGCTTT-TT-
131 AACATAGTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTC
* * *
662474 TCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATAGATTCTAGTAATG
195 TCC--CCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATG
* ** *
662539 ATCTTCATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCAACAGGAAAAATGATATTGA
258 ATCTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGA
* *
662604 TGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCTAAGTTCATCCTTT
323 TGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTT
* * * *
662669 AAATAAGGCAAGGCTCGATTCTCGTAACGGTCTCCATTCTTTTCATGATTTGGATGCCAAAACAT
388 AAATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACAC
* *
662734 ATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTGCTTTCCACC
453 ATTCCCTTCATTAGGGTAAATGACATTGATGCTTT-GGGTTGCAAGAAAAGCTTTTCTTTCCACC
* * * *
662799 GTTTTTTATAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCA
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCA
* * *
662864 TTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTCGAATACATCGTAATGATGCTTTG
582 TTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTG
* * *
662929 GTTTTGTAAGAAAAGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGA
647 GTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
* *
662994 AAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
712 TAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
* *
663059 CATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCT
777 CATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTA-CCTATTTTTCT
* * *
663124 TAAAATCAAAGTTAATCCTTTAAATAAGGCAAGCATCGATTCTGATAATAGTCTCTATTCTTTTC
841 TAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTC
* *
663189 GAGATTGAGAAGCAAAAACACA-TTCTTTTCATTAGGATGCATGAG
906 GAGATTGAGAAGCAAAAACACATTTC-CTTCATTAGGATGCATGAA
* * * * *
663234 ATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACTGTTTTTGACAAAATCAAAGTTTAT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
663299 CTCTTAAATACGACAAACAAGAATACTGATAATAATCCCCG-TCTTTTTAGGATTAGGTACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
*
663363 AACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGCTTTCTTC-
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* *
663427 CCCTCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAATCCAGTAATGAT
196 CCC-CAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGAT
* * * * *
663492 CTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGATTGATATTGATG
260 CTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATG
** *
663557 ATTTTCTTTTGCATGAAAATCTTTTCTAAGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAA
325 ATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAA
* * * * ** * *
663622 ATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTT-AACATTGGGA-AGCAAAAGCAC
390 ATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTT-TTCATGATTTGGATACCAAAA-CAC
* * * ** * *
663685 ATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACC
453 ATTCCCTTCATTAGGGTAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTTTCCACC
* *
663750 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACT-ATTACTAATCCCC
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCA-TACTAATCCCC
* * * * * *
663814 ATTCCTTTT-AGGATTAGGCAGCATAAACATAGTCTTCTTATT-AGGATACATCTTATTGATGCT
581 ATT-CTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCA-AATACATCATAATGATGCT
* * * *
663877 TTGGGTTCGCAAGAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAA
644 TTGGTTTTGCAAGAAAGGCTTTT-T-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA
* ** *
663941 TGAGATAAATATGGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATT
707 TGAGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATT
* ** * * * * *
664005 TTGCTCTTCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACGTTATT
772 TTGCTCATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTAC-CTATT
* * ** * *
664070 TTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTC
836 TTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTC
* * * * * * *
664135 TTGTT-TAGATTGGGAAGCAAACACACATTCCCTTTATTACGATCCAT-AA
901 TT-TTCGAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
* * * * * *
664184 ATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCATTTTTTATAGAATCGAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
664249 TTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTTCAGGATTAGGCACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* * * * *
664314 AACGTAGTCTT-TTGATTACGATACATAATATTGATGCTTTGGCTTCGCAGGAAAGGCTTT-TT-
131 AACATAGTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTC
* * *
664376 TCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATAGATTCTAGTAATG
195 TCC--CCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATG
* ** *
664441 ATCTTCATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCAACAGGAAAAATGATATTGA
258 ATCTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGA
* *
664506 TGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCTAAGTTCATCCTTT
323 TGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTT
* * * *
664571 AAATAAGGCAAGGCTCGATTCTCGTAACGGTCTCCATTCTTTTCATGATTTGGATGCCAAAACAT
388 AAATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACAC
* *
664636 ATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTGCTTTCCACC
453 ATTCCCTTCATTAGGGTAAATGACATTGATGCTTT-GGGTTGCAAGAAAAGCTTTTCTTTCCACC
* * * *
664701 GTTTTTTATAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCA
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCA
* * *
664766 TTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTCGAATACATCGTAATGATGCTTTG
582 TTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTG
* * *
664831 GTTTTGTAAGAAAAGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGA
647 GTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
* *
664896 AAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
712 TAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
* *
664961 CATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCT
777 CATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTA-CCTATTTTTCT
* *
665026 TAAAATCAAAGTTAATCCTTTAAATAAGGCAAGCATCGATTCTGATAATAGTCTCCATTCTTTTC
841 TAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTC
* *
665091 GAGATTGAGAAGCAAAAACACA-TTCTTTTCATTAGGATGCATGAG
906 GAGATTGAGAAGCAAAAACACATTTC-CTTCATTAGGATGCATGAA
* * * *
665136 ATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTAT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * * *
665201 CTTTTAAATACGACAAACAAGAATACTGATAATAATCCCCG-TCTTTTTAGGATTAGGTACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
*
665265 AACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGCTTTCTTC-
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* *
665329 CCCTCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAATCCAGTAATGAT
196 CCC-CAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGAT
* * * * *
665394 CTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGATTGATATTGATG
260 CTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATG
** *
665459 ATTTTCTTTTGCATGAAAATCTTTTCTAAGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAA
325 ATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAA
* * * * ** * *
665524 ATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTT-AACATTGGGA-AGCAAAAGCAC
390 ATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTT-TTCATGATTTGGATACCAAAA-CAC
* * * ** * *
665587 ATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACC
453 ATTCCCTTCATTAGGGTAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTTTCCACC
* * *
665652 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATACTAATCCCCA
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCA
* * * * * *
665717 TTCCTTTT-AGGATTAGGCAGCATAAACATAGTCTTCTTATT-AGGATACATCTTATTGATGCTT
582 TT-CTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCA-AATACATCATAATGATGCTT
* * * *
665780 TGGGTTCGCAAGAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAAT
645 TGGTTTTGCAAGAAAGGCTTTT-T-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
* ** *
665844 GAGATAAATATGGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTT
708 GAGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTT
* ** * * * * *
665908 TGCTCTTCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACTTTATTT
773 TGCTCATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTAC-CTATTT
* * ** * *
665973 TCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCT
837 TTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCT
* * * * * * * *
666038 TGTT-TAGATTGGGAAGCAAACACACATTCCCTTTATTACGATCCATAAA
902 T-TTCGAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
* * * * *
666087 ATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCGTTTTTTATAGAATCGAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
666152 TTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTTCAGGATTAGGCACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* * * *
666217 AACGTAGTCTT-TTGATTAGGATACATAATATTGATGCTTTGGCTTCGCAGGAAAGGCTTT-TT-
131 AACATAGTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTC
* * *
666279 TCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATAGATTCTAGTAATG
195 TCC--CCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATG
** *
666344 ATCTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCAACAGGAAAAATGATATTGA
258 ATCTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGA
* *
666409 TGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCTAAGTTCATCCTTT
323 TGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTT
* * * *
666474 AAATAAGGCAAGGCTCGATTCTCGTAACGGTCTCCATTCTTTTCATGATTTGGATGCCAAAACAT
388 AAATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACAC
* * *
666539 ATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGATGCAAGAAAAGCTTTGCTTTCCACC
453 ATTCCCTTCATTAGGGTAAATGACATTGATGCTTT-GGGTTGCAAGAAAAGCTTTTCTTTCCACC
* * * *
666604 GTTTTTTATAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCA
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCA
* * * * *
666669 TTCTTTTCAAGATTAGACACCATAAACGTAGTCTCCTCATTCGAATGCATCATAATGATGCTTTG
582 TTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTG
* * *
666734 GTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAATGTCCAAGTTCGTGTCTCAAATGAGA
647 GTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
* *
666799 AAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
712 TAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
* *
666864 CATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCT
777 CATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTA-CCTATTTTTCT
* *
666929 TAAAATCAAAGTTAATCCTTTAAATAAGGCAAGCATCGATTCTGATAATAGTCTCCATTCTTTTC
841 TAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTC
* *
666994 GAGATTGAGAAGCAAAAACACA-TTCTTTTCATTAGGATGCATGAG
906 GAGATTGAGAAGCAAAAACACATTTC-CTTCATTAGGATGCATGAA
* * * *
667039 ATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTAT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * * *
667104 CTTTTAAATACGACAAACAAGAATACTGATAATAATCCCCG-TCTTTTTAGGATTAGGTACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
*
667168 AACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGCTTTCTTC-
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* *
667232 CCCTCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAATCCAGTAATGAT
196 CCC-CAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGAT
* * * * *
667297 CTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGATTGATATTGATG
260 CTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATG
** *
667362 ATTTTCTTTTGCATGAAAATCTTTTCTAAGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAA
325 ATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAA
* * * * ** * *
667427 ATATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTT-AACATTGGGA-AGCAAAAGCAC
390 ATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTT-TTCATGATTTGGATACCAAAA-CAC
* * * ** * *
667490 ATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACC
453 ATTCCCTTCATTAGGGTAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTTTCCACC
* * *
667555 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATACTAATCCCCA
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCA
* * * * * *
667620 TTCCTTTT-AGGATTAGGCAGCATAAACATAGTCTTCTTATT-AGGATACATCTTATTGATGCTT
582 TT-CTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCA-AATACATCATAATGATGCTT
* * * *
667683 TGGGTTCGCAAGAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAAT
645 TGGTTTTGCAAGAAAGGCTTTT-T-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
* ** *
667747 GAGATAAATATGGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTT
708 GAGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTT
* ** * * * * *
667811 TGCTCTTCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACTTTATTT
773 TGCTCATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTAC-CTATTT
* * ** * *
667876 TCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCT
837 TTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCT
* * * * * * * *
667941 TGTT-TAGATTGGGAAGCAAACACACATTCCCTTTATTACGATCCATAAA
902 T-TTCGAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
* * * * *
667990 ATTGATGCTTTGGTGTCATCAGAAAAGCTTTTCCTTCCACCGTTTTTTATAGAATCGAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
668055 TTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTTCAGGATTAGGCACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* * * *
668120 AACGTAGTCTT-TTGATTAGGATACATAATATTGATGCTTTGGCTTCGCAGGAAAGGCTTT-TT-
131 AACATAGTCTTCTT-ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTC
* * *
668182 TCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATAGATTCTAGTAATG
195 TCC--CCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATG
** *
668247 ATCTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCAACAGGAAAAATGATATTGA
258 ATCTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGA
* *
668312 TGATTTGCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCTAAGTTCATCCTTT
323 TGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTT
* * * *
668377 AAATAAGGCAAGGCTCGATTCTCGTAACGGTCTCCATTCTTTTCATGATTTGGATGCCAAAACAT
388 AAATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACAC
* * *
668442 ATCCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGGATGCAAGAAAAGCTTTGCTTTCCACC
453 ATTCCCTTCATTAGGGTAAATGACATTGATGCTTT-GGGTTGCAAGAAAAGCTTTTCTTTCCACC
* * * *
668507 GTTTTTTATAGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAATGCCCA
517 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCA
* * * * *
668572 TTCTTTTCAAGATTAGACACCATAAACGTAGTCTCCTCATTCGAATGCATCATAATGATGCTTTG
582 TTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTG
* * *
668637 GTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAATGTCCAAGTTCGTGTCTCAAATGAGA
647 GTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
* *
668702 AAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
712 TAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTTGCT
* *
668767 CATTAGGAAAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCCTATTTTTCT
777 CATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTA-CCTATTTTTCT
* *
668832 TAAAATCAAAGTTAATCCTTTAAATAAGGCAAGCATCGATTCTGATAATAGTCTCCATTCTTTTC
841 TAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTC
* *
668897 GAGATTGAGAAGCAAAAACACA-TTCTTTTCATTAGGATGCATGAG
906 GAGATTGAGAAGCAAAAACACATTTC-CTTCATTAGGATGCATGAA
* * * *
668942 ATTGATGCTTTGGAGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTAT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
669007 CTCTTAAATACGACAAACAAGAATACTGATAATAATCCCCG-TCTTTTTAGGATTAGGTACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* *
669071 AACATAGTCTTCTTATTAGGATACATGATATTGATTCTTTGGTTTCGCAAGAAAGGCTTTCTTCC
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* *
669136 CCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAATCCAGTAATGATC
196 CCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATC
* * * * *
669201 TTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGATTGATATTGATGA
261 TTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGA
*** *
669266 TTTTCTTTTGCATGAAAATCTTTTCCAAGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAAA
326 TTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAA
* * * * ** * *
669331 TATGGCAAGCATCGATTCTCGTAATAGTCTCCTTTCTTCTT-AACATTGGGA-AGCAAAAGCACA
391 TAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTT-TTCATGATTTGGATACCAAAA-CACA
* * * ** * *
669394 TTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTCTCCACCA
454 TTCCCTTCATTAGGGTAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTTTCCACCA
* * *
669459 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTAATACTAATCCCCAT
518 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCAT
* * * * * *
669524 TCCTTTT-AGGATTAGGCAGCATAAACATAGTCTTCTTATT-AGGATACATCTTATTGATGCTTT
583 T-CTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCA-AATACATCATAATGATGCTTT
* * * *
669587 GGGTTCGCAAGAAAGGCTTTTATATCACACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCTAATG
646 GGTTTTGCAAGAAAGGCTTTT-T-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATG
* ** *
669651 AGATAAATATGGATTCTACAAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACA-ATTTT
709 AGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTT
* ** * * * * *
669715 GCTCTTCAGGATAAATGATATACATGATTTTATTTTGCGTGGAAATATTTTCTTCACGTTATTTT
774 GCTCATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTAC-CTATTTT
* ** * *
669780 CCTTAAAATCAAAGTTCATCCTTTTTCATTTTGTGAATTGGTACTATAAACAATTCTG-CTCTTC
838 TCTTAAAATCAAAGTTCATCC--TTT-A---AAT-AA--GG--C---AAGC-A-TC-GATTC-TC
* * ** ** * * * ** * * * ***
669844 AGGATAAATAATATTGATGATTTT--A-TTCTGTG-TGC---AATTCTTTTCTTCTCGTTATTTT
885 ---AT-AATAGTCTCCATTCTTTTCGAGAT-TGAGAAGCAAAAACACATTTCCT-TCATTAGGAT
* * *
669902 CCTTAAA
944 GCATGAA
** * ** ** * * *
669909 ATCAAAG--TTCATCCCGTAAACAAACCAAGCTTCGATTCTCATAATAGCCTCCATTCTTTTTTA
1 ATTGATGCTTTGGTGTCGT-AA-GAA--AAGC-T---TT-TC-T--T----TCCA-CCGTTTTT-
* * *** * * * * * ** *
669972 GATTGGGAAGTGAACACACAT-TCCCTTTATTAGGATCCATAA-AATTG-ATGCTTTGGTGTCAT
48 GA-T-AGAA-TCAA-A-GTTTGTCTCTTAAATACGA--CA-AACAA--GAATAC--T--CAT-AC
**** * ** ** * * * * *
670034 TAGAAAAGC-TTTTCTTTCCACCATT---TTCGATAAAATCAAAGTTTGTCTCTCAAATATGACA
98 TA-ATCCCCGTTTT-TTT-TAGGATTAGGCACCAT-AAA-CATAGTCT-TCT-T--ATTA-G-GA
* * ** * *** *
670095 AACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCACAAACAATAGTCTTCTC
152 TACATG---A-T-AT--TGAT----G--C-TTT--GG-TTTCGCA--AGAAAGGCT-TTCTTCTC
** *** ** * * * ** ** * *** **
670160 CTTAGGATACATCATA-T-TGATGCTTTG-GTTTCGCA-G-GA-AAGGC-TTTTTTCTTACCAAT
197 CCCAATTTTTAT-AAAGTCT-AAG-TTCGTGCCTCAAATGAGACAA-ACATGGATTC-TAGTAAT
** ** * * * * *
670218 TTTCGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATAGATTCTGGTAATGATCTTCATTC
257 GATC-TTTATTCT---TT--TG-GTC--ATTAGGC--AC-T--A------TAA--A-C-ACATTC
** ** * * * ** * ***
670283 TTTTGGTCATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTG-ATGATTTTCT
298 ---TCCTCATTAGG----ATAAA-TGA-TAT--T-GAT--GAT--TTTCTTTTGCATGAAAATCT
*
670347 TTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGC
347 TTT-C-T-----T--------TGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGC
* * *
670412 AAGCCTCGATTCTCGTAACAGTCCCCATTCTTTTCATGATTTGGATGCCAAAACACATTCCCCTC
397 AAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACACATTCCCTTC
670477 ATTAGGGTAAATGACATTGATGCTTTGAGGTTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT
462 ATTAGGGTAAATGACATTGATGCTTTG-GGTTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT
* * *
670542 AGAATAAAAGTTTGTCTCCTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCA
526 AGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTTTTCA
* * * * *
670607 AGATTAGGCACCATAAAGATAATATTCTTATTCGAATACATCATAATGATGCTTTGGTTTTGCAA
591 AGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTGGTTTTGCAA
* * * * **
670672 GAAATGCTTTTTTTCTCACCAAGTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACCAACATG
656 GAAAGGC-TTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGATAAACATG
** * *
670737 GATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGTACTATAAACGCATTCTGCTCATCAGGA
720 GATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTCATCAGGA
* *
670802 TAAATGATATTGATGATTTTATTTTGCATGAAAATATTTTCTTTACCCTATTTTTCTTAAAATCA
785 TAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTA-CCTATTTTTCTTAAAATCA
* * * * * *
670867 AAGTTAATCCCTTAAATAAGGCAAGCATCAATTCTCATAACT-CTCTCCATTCTTTCCAAGATTG
849 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAA-TAGTCTCCATTCTTTTCGAGATTG
* * *
670931 AGAAGCAAAAACACATTTCCTTCTTTAGGATGTATGAC
913 AGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
* * * *
670969 ATTGATGCTTTGGCGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGACAGAATCAAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * * * *
671034 CTCTTAAATACAACAAATAAGAATAATGATACTAAT-CCC-ATTTTTTTAGGATTAGGTACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* * * *
671097 AACATAGTCTTCTTATTCGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTATTC-
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
*
671161 CGCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATAGATTCTAGTAATGAT
196 C-CCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGAT
* * * *
671226 CTTCATTCTTTTGGTCATTAGGCACTATAAACATATTCTCCTCAATAGGATAAAGGATATTGATG
260 CTTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATG
* * * * *
671291 ATTTTTTTTTGTATGGAAATCTTTT-TTGTGCCCTATTTTCCTTAAAATCAAAGTTGATCCTTTA
325 ATTTTCTTTTGCATGAAAATCTTTTCTT-TGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTA
* * * *
671355 AATAAGGCAAGCCTTGATTCTCATAGCAGTCTCCATTCTTTTCATGATTTGGATGCCAAAACACA
389 AATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACACA
* * *
671420 TTCCCTTCATTAGGGCAAATGACATTGATGCTTTGGGTTGCAAGAAAAGCTTTTCTTTTGC-CCG
454 TTCCCTTCATTAGGGTAAATGACATTGATGCTTTGGGTTGCAAGAAAAGCTTTTC-TTTCCACCA
** * * *
671484 TTTTTTTTAGAATCAAAGTTTGTCTCTCAAATATGACAAACATTAATTCTCATACTAATCCCCAT
518 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCAT
* * * * *
671549 TCTTTTCAAGATTAGACACTATAAACATAGTCTCCTCGTTCGAATACATCATAATGATGCTTTGG
583 TCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTGG
* * * * * *
671614 TTTTGTAAGAAAAGCTTTTTTCCCACCAATTTTTGTGAAGTCTATGTTCGTGCCTTAAATGAGAC
648 TTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGAT
* ** * *
671679 AAACAGGGATTCTAGTAAAGATCTTCGTCCATTTTGTGATTAGGTACTATAAACACATTCTGCTC
713 AAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTC
* * *
671744 GTTAGGATAAATGATATTGATGATTTTATTTTG-TATGAAAATCTTTTCTTTGCCCTATTTTTCT
778 ATCAGGATAAATGATATTGATGATTTTATTTTGCT-TGAAAATCTTTTCTTT-ACCTATTTTTCT
* * * *
671808 TAAAATCAAAGTTAATCCTTTAAAAAAGGCAAGCATCAATTCTCATAACAGTCTCCATTCTTTTC
841 TAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTC
* *
671873 AAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAC
906 GAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
*** * **
671918 ATTGATGCTTTGCCATCGTAAGAAAAGCTTTTCTTTCCCCCAATTTTGATAGAATCAAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * * * *
671983 CTCTTAAAAATGACAAA-AATGAATACTCATACTAATCCTCGTTCTTTTTAGGATTACGCAACAT
66 CTCTTAAATACGACAAACAA-GAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCAT
* * * *
672047 AAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTT
130 AAACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTC
* * * * * *
672112 TCACACCAATTTTTGTAATGTCTAAGTTCGTGCCTCTAATGAGATAAACTTGGATTCTAGTAAAG
195 TC-C-CCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATG
* * * *
672177 ATCGTTT-TTCATTTT-TTGAATAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATGATAT
258 ATC-TTTATTC-TTTTGGTCATTAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATAT
* * * ***
672238 TGATCATTTTATTTTGCATGGAAATCTTTTCTTTATGTTATTTTCCTTAAAATCAAAGTTCATCC
320 TGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCC
* ** * * * * * * * *
672303 TTTAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCTTTTTAAGATTTGGGA-AGCGAA
385 TTTAAATAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTT-GGATA-CCAA
* * * * * * ***
672367 CACATATTTCCCTT-GTTAGGATACATGAAATTGATGC-TTGGTGTCATAAGAAAAGCTTTTCTT
448 AACACA-TTCCCTTCATTAGGGTAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTT
* * * * * *
672430 TCCACCGTTTTCGATAAAATCAAAGTTTGTCACTTAAATACGACAAACATGAATACTAATACTAA
511 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAA
* * * * * * ** *
672495 TCCCCATTCTTTTTAGGATTAGGCACCACAAACATAGTATTCTCCTT-AGGATATGTCATATTGA
576 TCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCA-AATACATCATAATGA
* * * *
672559 CGCTTTGGTTTTGCAGGAAAGGCTTTCTTCCC-CCTAATTTTTATAAAGTCTAAGTTCGTGCCTC
640 TGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACC-AATTTTTGTAAAGTCTAAGTTCGTGCCTC
* * * * * * * * * *
672623 AGATGCGACAAACATGGAATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACAC
704 AAATGAGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACAC
* * * * * * * * * *
672688 ATTCTCCACATTAGGATGAATGATATTGATGACTTTCTTTTACATGAAAATCTTTTC-TGAGCCC
769 ATTTTGCTCATCAGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTA--CC
* * * *
672752 TATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCC
832 TATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCC
** * * * *
672817 ATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGAC
897 ATTCTTTTCGAGATTGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
* *
672871 ATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGT
1 ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * * * *
672936 CTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATA
66 CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
* * * * * * * * *
673001 AACGTAGTCTTCTCATTTGAATACATCATAATGATGCTTTGGTTTTGTAAGAAAGGCTTTTTTC-
131 AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
* * * *
673065 CCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATCAGACAAACATGGATTCTAGTAAAGAT
196 CC-CCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGAT
* * * * * * *
673130 CTTCATTCATTTT-GTGATTACGG-ACCATAAACACATTTTGCTCTTTAGGACAAATGAT
260 CTTTATTC-TTTTGGTCATTA-GGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
673188 GAAAACCAAG
Statistics
Matches: 13198, Mismatches: 2068, Indels: 790
0.82 0.13 0.05
Matches are distributed among these distances:
947 1 0.00
948 187 0.01
949 744 0.06
950 1215 0.09
951 4689 0.36
952 4535 0.34
953 800 0.06
954 15 0.00
957 1 0.00
958 3 0.00
960 2 0.00
962 1 0.00
963 1 0.00
965 13 0.00
966 17 0.00
967 25 0.00
968 2 0.00
969 9 0.00
970 6 0.00
971 2 0.00
972 14 0.00
973 3 0.00
974 7 0.00
975 1 0.00
977 1 0.00
978 8 0.00
981 8 0.00
982 7 0.00
983 3 0.00
985 5 0.00
986 3 0.00
987 11 0.00
988 1 0.00
989 4 0.00
990 5 0.00
991 2 0.00
992 1 0.00
993 1 0.00
994 3 0.00
995 7 0.00
996 12 0.00
997 9 0.00
998 9 0.00
999 3 0.00
1001 5 0.00
1002 7 0.00
1003 22 0.00
1004 12 0.00
1005 10 0.00
1006 12 0.00
1007 3 0.00
1008 2 0.00
1009 3 0.00
1010 4 0.00
1012 1 0.00
1016 4 0.00
1017 3 0.00
1018 2 0.00
1019 3 0.00
1020 11 0.00
1021 9 0.00
1022 11 0.00
1023 23 0.00
1024 20 0.00
1025 11 0.00
1026 31 0.00
1027 28 0.00
1028 42 0.00
1029 33 0.00
1030 42 0.00
1031 31 0.00
1032 11 0.00
1033 17 0.00
1034 15 0.00
1035 18 0.00
1036 3 0.00
1037 8 0.00
1038 13 0.00
1039 13 0.00
1040 28 0.00
1041 23 0.00
1042 11 0.00
1043 9 0.00
1044 5 0.00
1045 11 0.00
1046 8 0.00
1047 14 0.00
1048 22 0.00
1049 8 0.00
1050 7 0.00
1051 9 0.00
1052 7 0.00
1053 6 0.00
1054 14 0.00
1055 16 0.00
1056 5 0.00
1057 13 0.00
1058 13 0.00
1059 9 0.00
1060 32 0.00
1061 23 0.00
1062 18 0.00
1063 9 0.00
1064 10 0.00
1065 5 0.00
1066 9 0.00
1067 2 0.00
1069 2 0.00
1070 1 0.00
1073 1 0.00
1074 29 0.00
1075 321 0.02
1076 89 0.01
1077 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (950 bp):
ATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
CTCTTAAATACGACAAACAAGAATACTCATACTAATCCCCGTTTTTTTTAGGATTAGGCACCATA
AACATAGTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCT
CCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATC
TTTATTCTTTTGGTCATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGA
TTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAA
TAAGGCAAGCCTCGATTCTCGTAACAGTCTCCATTCTTTTCATGATTTGGATACCAAAACACATT
CCCTTCATTAGGGTAAATGACATTGATGCTTTGGGTTGCAAGAAAAGCTTTTCTTTCCACCATTT
TTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCT
TTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTCAAATACATCATAATGATGCTTTGGTTT
TGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGATAAA
CATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTCATC
AGGATAAATGATATTGATGATTTTATTTTGCTTGAAAATCTTTTCTTTACCTATTTTTCTTAAAA
TCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCGAGAT
TGAGAAGCAAAAACACATTTCCTTCATTAGGATGCATGAA
Found at i:669840 original size:122 final size:122
Alignment explanation
Indices: 669679--669922 Score: 389
Period size: 122 Copynumber: 2.0 Consensus size: 122
669669 CAAAAGATCT
* *
669679 TTTTTCATTTTGTGAATAGGTACTATAAACAATTTTGCTCTTCAGGATAAATGATATACATGATT
1 TTTTTCATTTTGTGAATAGGTACTATAAACAATTCTGCTCTTCAGGATAAATAATATACATGATT
* *
669744 TTATTTTGCGTGGAAATATTTTCTTCACGTTATTTTCCTTAAAATCAAAGTTCATCC
66 TTATTCTGCGTGCAAATATTTTCTTCACGTTATTTTCCTTAAAATCAAAGTTCATCC
* **
669801 TTTTTCATTTTGTGAATTGGTACTATAAACAATTCTGCTCTTCAGGATAAATAATATTGATGATT
1 TTTTTCATTTTGTGAATAGGTACTATAAACAATTCTGCTCTTCAGGATAAATAATATACATGATT
* * * *
669866 TTATTCTGTGTGCAATTCTTTTCTTCTCGTTATTTTCCTTAAAATCAAAGTTCATCC
66 TTATTCTGCGTGCAAATATTTTCTTCACGTTATTTTCCTTAAAATCAAAGTTCATCC
669923 CGTAAACAAA
Statistics
Matches: 111, Mismatches: 11, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
122 111 1.00
ACGTcount: A:0.28, C:0.15, G:0.12, T:0.45
Consensus pattern (122 bp):
TTTTTCATTTTGTGAATAGGTACTATAAACAATTCTGCTCTTCAGGATAAATAATATACATGATT
TTATTCTGCGTGCAAATATTTTCTTCACGTTATTTTCCTTAAAATCAAAGTTCATCC
Found at i:672329 original size:477 final size:476
Alignment explanation
Indices: 669804--673187 Score: 4033
Period size: 477 Copynumber: 7.1 Consensus size: 476
669794 TTCATCCTTT
* *
669804 TTCATTTTGTGAATT-GGTACTATAAACA-ATTCTGCTC-TTCAGGATAAATAATATTGATGATT
1 TTCATTTTGTG-ATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATT
* ** * * * ** *
669866 TTATTCTGTGTGCAATTCTTTTCTTCT-CGTTATTTTCCTTAAAATCAAAGTTCATCCCGTAAAC
64 TTATTTTGCATGAAAATCTTTTCTT-TACGCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAAT
** * * * ** ** *
669930 AAACCAAGCTTCGATTCTCATAATAGCCTCCATTCTTTTTTAGATTGGGAAGTGAACACACATTC
128 AAGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTC
* * * * *
669995 CCTTTATTAGGATCCATAAAATTGATGCTTTGGTGTCATTAGAAAAGCTTTTCTTTCCACCATTT
193 CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTT
* * * *
670060 TCGATAAAATCAAAGTTTGTCTCTCAAATATGACAAACATGAATACTCATACTAATCCCCGTTCT
258 TTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCT
* *
670125 TTTCAGGATTAGGCACCACAAACAATAGTCTTCTCCTTAGGATACATCATATTGATGCTTTGGTT
323 TTTCAGGATTAGGCACCATAAAC-ATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTT
* * * * *
670190 TCGCAGGAAAGGC-TTTTTTCTTACCAATTTTCGTAAAGTCTAAGTTCGTGACTCAAATGAGACA
387 TTGCAAGAAAGGCTTTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACA
* * *
670254 AACATAGATTCTGGTAATGATCTTCA
451 AACATGGATTCTAGTAAAGATCTTCA
* * *
670280 TTC-TTTTGGTCATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTT
1 TTCATTTT-GTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTT
* * *
670344 TCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAA
65 TATTTTGCATGAAAATCTTTTCTTTACGCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAA
* * * * * * *
670409 GGCAAGCCTCGATTCTCGTAACAGTCCCCATTCTTTTCATGATTTGGATGCCAAAACACATTCCC
130 GGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCC
* * * ***
670474 CTCATTAGGGTAAATGACATTGATGCTTTGAG-GTTGCAAGAAAAGCTTTTCTTTCCACCATTTT
195 TTCATTAGGATACATGACATTGATGCTTTG-GTGTCATAAGAAAAGCTTTTCTTTCCACCATTTT
* * *
670538 TGATAGAATAAAAGTTTGTCTCCTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTT
259 TGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * * * *
670603 TTCAAGATTAGGCACCATAAAGATAATATTCTTATTCGAATACATCATAATGATGCTTTGGTTTT
324 TTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTT
* * * *
670668 GCAAGAAATGCTTTTTTTCTCACCAAGTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACCAA
389 GCAAGAAAGGCTTTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAA
670733 CATGGATTCTAGTAAAGATCTTCA
453 CATGGATTCTAGTAAAGATCTTCA
* * *
670757 TTCATTTTGTGATTAGGTACTATAAACGCATTCTGCTCATCAGGATAAATGATATTGATGATTTT
1 TTCATTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT
* * * * *
670822 ATTTTGCATGAAAATATTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTAATCCCTTAAATAAG
66 ATTTTGCATGAAAATCTTTTCTTTACGCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAG
* ** * * *
670887 GCAAGCATCAATTCTCATAACTCTCTCCATTCTTTCCAAGATTGAGAAGCAAAAACACATTTCCT
131 GCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCCT
* ** *
670952 TCTTTAGGATGTATGACATTGATGCTTTGGCGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTG
196 TCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTG
* ** * * * *
671017 ACAGAATCAAAGTTTGTCTCTTAAATACAACAAATAAGAATAATGATACTAAT-CCCATT-TTTT
261 ATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTTTT
* * * * *
671080 TAGGATTAGGTACCATAAACATAGTCTTCTTATTCGGATACA-CGATATTGATGCTTTGGTTTCG
326 CAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATC-ATATTGATGCTTTGGTTTTG
* * * *
671144 CAAGAAAAGC-TTTATTCCGCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAAC
390 CAAGAAAGGCTTTTTTTCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAAC
* *
671208 ATAGATTCTAGTAATGATCTTCA
454 ATGGATTCTAGTAAAGATCTTCA
* * * * *
671231 TTC-TTTTGGTCATTAGGCACTATAAACATATTCTCCTCAATAGGATAAAGGATATTGATGATTT
1 TTCATTTT-GTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTT
* * * * * *
671295 TTTTTTGTATGGAAATCTTTT-TTGTGCCCTATTTTCCTTAAAATCAAAGTTGATCCTTTAAATA
65 TATTTTGCATGAAAATCTTTTCTT-TACGCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATA
* * * * * * *
671359 AGGCAAGCCTTGATTCTCATAGCAGTCTCCATTCTTTTCATGATTTGGATGCCAAAACACATTCC
129 AGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCC
** * *** * *
671424 CTTCATTAGGGCAAATGACATTGATGCTTTGG-GTTGCAAGAAAAGCTTTTCTTTTGC-CCGTTT
194 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTC-TTTCCACCATTT
** * * *
671487 TTTTTAGAATCAAAGTTTGTCTCTCAAATATGACAAACATTAATTCTCATACTAATCCCCATTCT
258 TTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCT
* * * * * * * *
671552 TTTCAAGATTAGACACTATAAACATAGTCTCCTCGTTCGAATACATCATAATGATGCTTTGGTTT
323 TTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTT
* * * * * *
671617 TGTAAGAAAAGCTTTTTTCCCACCAATTTTTGTGAAGTCTATGTTCGTGCCTTAAATGAGACAAA
388 TGCAAGAAAGGCTTTTTTTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAA
* *
671682 CAGGGATTCTAGTAAAGATCTTCG
453 CATGGATTCTAGTAAAGATCTTCA
* * *
671706 TCCATTTTGTGATTAGGTACTATAAACACATTCTGCTCGTTAGGATAAATGATATTGATGATTTT
1 TTCATTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT
* * * * * *
671771 ATTTTGTATGAAAATCTTTTCTTTGCCCTATTTTTCTTAAAATCAAAGTTAATCCTTTAAAAAAG
66 ATTTTGCATGAAAATCTTTTCTTTACGCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAG
* * *
671836 GCAAGCATCAATTCTCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTTCCT
131 GCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCCT
* *** * * *
671901 TCATTAGGATGCATGACATTGATGCTTTGCCATCGTAAGAAAAGCTTTTCTTTCCCCCAATTTTG
196 TCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTG
* * * *
671966 ATAGAATCAAAGTTTGTCTCTTAAAAATGACAAAAATGAATACTCATACTAATCCTCGTTCTTTT
261 ATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTTTT
* * * * **
672031 TAGGATTACGCAACATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCAC
326 CAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTTGC
* * *
672096 AAGAAAGGCTTTTTTTTCACACCAATTTTTGTAATGTCTAAGTTCGTGCCTCTAATGAGATAAAC
391 AAGAAAGGC-TTTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAAC
* *
672161 TTGGATTCTAGTAAAGATCGTT-T
454 ATGGATTCTAGTAAAGATC-TTCA
* * *
672184 TTCATTTTTTGAATAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATCATTT
1 TTCATTTTGTGATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTT
* * * *
672247 TATTTTGCATGGAAATCTTTTCTTTATGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAA
65 TATTTTGCATGAAAATCTTTTCTTTACGCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAA
** * * * * * * * *
672312 ACCAAGCTTCGATTCTCATAATAGCCCCCATTCTTTTTAAGATTTGGGAAGCGAACACATATTTC
130 GGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGA-TTGGGAAGCAAAAACACA-TTC
* * *
672377 CCTT-GTTAGGATACATGAAATTGATGC-TTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTT
193 CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTT
* * * * *
672440 TCGATAAAATCAAAGTTTGTCACTTAAATACGACAAACATGAATACTAATACTAATCCCCATTCT
258 TTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCT
* * * * ** *
672505 TTTTAGGATTAGGCACCACAAACATAGTATTCTCCTTAGGATATGTCATATTGACGCTTTGGTTT
323 TTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTT
* * * * * *
672570 TGCAGGAAAGGC-TTTCTTCCCCCTAATTTTTATAAAGTCTAAGTTCGTGCCTCAGATGCGACAA
388 TGCAAGAAAGGCTTTTTTTCCACC-AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAA
* * * *
672634 ACATGGAATCCAGTAATGATCTTTA
452 ACATGGATTCTAGTAAAGATCTTCA
* * * * * *
672659 TTCATTTGGTGATTTGGCACTATAAACACATTCTCCACATTAGGATGAATGATATTGATGACTTT
1 TTCATTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT
* * * * * *
672724 CTTTTACATGAAAATCTTTTC-TGAGCCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATAT
66 ATTTTGCATGAAAATCTTTTCTTTA-CGCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAA
* * *
672788 GGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCC
130 GGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCC
672853 TTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTT
195 TTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTT
*
672918 GATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTT
260 GATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTTT
* * * * * *
672983 TCAAGATTAGACACCATAAACGTAGTCTTCTCATTTGAATACATCATAATGATGCTTTGGTTTTG
325 TCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTTG
* * * *
673048 TAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATCAGACAAACA
390 CAAGAAAGGCTTTTTTTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
673113 TGGATTCTAGTAAAGATCTTCA
455 TGGATTCTAGTAAAGATCTTCA
* * * * *
673135 TTCATTTTGTGATTACGG-ACCATAAACACATTTTGCTCTTTAGGACAAATGAT
1 TTCATTTTGTGATTA-GGTACTATAAACACATTCTCCTCATTAGGATAAATGAT
673188 GAAAACCAAG
Statistics
Matches: 2456, Mismatches: 415, Indels: 74
0.83 0.14 0.03
Matches are distributed among these distances:
473 72 0.03
474 273 0.11
475 507 0.21
476 591 0.24
477 883 0.36
478 122 0.05
479 8 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (476 bp):
TTCATTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT
ATTTTGCATGAAAATCTTTTCTTTACGCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAG
GCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCCT
TCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTG
ATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTTTT
CAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTTGC
AAGAAAGGCTTTTTTTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
GGATTCTAGTAAAGATCTTCA
Found at i:672943 original size:159 final size:156
Alignment explanation
Indices: 669940--673166 Score: 956
Period size: 159 Copynumber: 20.3 Consensus size: 156
669930 AAACCAAGCT
* * * *
669940 TCGATTCTCATAATAGCCTCCATTCTTTTT-TAGATTGGGAA-GTGAACACACATTCCCTTTATT
1 TCGATTCTCATAATAGTCTCCATTCTTTTTAT-GATTAGGAACAT-AA-ACACATTCCCTTCATT
* * * * * * *
670003 AGGATCCATAAAATTGATGCTTTGGTGTCATTAGAAAAGCTTTTCTTTCCACCATTTTCGATAAA
63 AGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAA
* *
670068 ATCAAAGTTTGTCTCTCAAATATGACAAACA
128 ATCAAAGTTCGTC-CTTAAATA-GACAAACA
* * * * * * * * * * *
670099 T-GAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCACAAACA-ATAGT-CTTCTCC
1 TCG-ATTCTCATAATAGTCTCCATTCTTTTTATGATTAGG-AACATAAACACAT--TCCCT-TCA
* * * * * *
670161 TTAGGATACATCATATTGATGCTTTGGTTTCGCAGGAAAGGC-TTT-TTTCTTACCAATTTTCG-
61 TTAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGA
* * * *
670223 TAAAGTCTAAGTTCGTGACTCAAATGAGACAAACA
124 TAAAATCAAAGTTCGT-CCTTAAAT-AGACAAACA
* ** * ** * * *
670258 TAGATTCTGGTAAT-GATCTTCATTCTTTTGGTCATTAGGCACTATAAACACATTCTCC-TCAAT
1 TCGATTCTCATAATAG-TCTCCATTCTTTTTATGATTAGGAAC-ATAAACACATTC-CCTTCATT
* * ** * * * * * ***
670321 AGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCC-CTATTTTCCTTAA
63 AGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTT-CCACCATTTTTGATAA
* * * *
670385 AATCAAAGTTCATCCTTTAAATAAGGCAAGCC
127 AATCAAAGTTCGTCC-TTAAAT-AGACAAACA
* * * * * * *
670417 TCGATTCTCGTAACAGTCCCCATTCTTTTCATGATTTGGATGCCA-AAACACATTCCCCTCATTA
1 TCGATTCTCATAATAGTCTCCATTCTTTTTATGATTAGGA--ACATAAACACATTCCCTTCATTA
* * * * * *
670481 GGGTAAATGACATTGATGCTTTGAGGTT-GCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGA
64 GGATACATGATATTGATGCTTTG-GTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAA
* * *
670545 ATAAAAGTTTGTCTCCTAAATATGACAAACA
128 ATCAAAGTTCGTC-CTTAAATA-GACAAACA
* * * * * * * * * * *
670576 T-GAATACTCATACTAATCCCCGTTCTTTTCAAGATTAGGCACCATAAAGATAATAT-TCTT-AT
1 TCG-ATTCTCATAATAGTCTCCATTCTTTTTATGATTAGG-AACATAAACA-CAT-TCCCTTCAT
* * * * * * * *
670638 TCGAATACATCATAATGATGCTTTGGTTTTGCAAGAAATGCTTTT-TTTCTCACCAAGTTTTG-T
62 TAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGAT
* * *
670701 AAAGTCTAAGTTCGTGCCTTAAATGAGACCAACA
125 AAAATCAAAGTTCGT-CCTTAAAT-AGACAAACA
* * * * * * *
670735 TGGATTCT-AGTAA-AGATCTTCATTCATTTTGTGATTAGGTACTATAAACGCATTCTGC-TCAT
1 TCGATTCTCA-TAATAG-TCTCCATTCTTTTTATGATTAGGAAC-ATAAACACATTC-CCTTCAT
* * * ** * * * ** * **
670797 CAGGATAAATGATATTGATGATTTTATTTTGCATGAAAATATTTTCTTTACC-CTATTTTTCTTA
62 TAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTT-CCACCATTTTTGATA
** * *
670861 AAATCAAAGTTAATCCCTTAAATAAGGCAAGCA
126 AAATCAAAGTTCGT-CCTTAAAT-AGACAAACA
* * ** * * * *
670894 TCAATTCTCATAACT-CTCTCCATTCTTTCCAAGATT-GAGAAGCAAAAACACATTTCCTTCTTT
1 TCGATTCTCATAA-TAGTCTCCATTCTTTTTATGATTAG-GAA-CATAAACACATTCCCTTCATT
** * ** * * *
670957 AGGATGTATGACATTGATGCTTTGGCGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGACAGA
63 AGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAA
* * *
671022 ATCAAAGTTTGTCTCTTAAATACAACAAATA
128 ATCAAAGTTCGTC-CTTAAATA-GACAAACA
* ** * * * * * * * *
671053 -AGAATAATGATACTAATC-CCATT-TTTTTAGGATTAGGTACCATAAACATAGTCTTCTT-ATT
1 TCG-ATTCTCATAATAGTCTCCATTCTTTTTATGATTAGG-AACATAAACACATTC-CCTTCATT
* * * * *
671114 CGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAAGC-TTT-ATTCCGCCCAATTTTT-ATA
63 AGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGATA
* * *
671176 AAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
126 AAATCAAAGTTCGT-CCTTAAAT-AGACAAACA
* * ** * * * *
671209 TAGATTCT-AGTAAT-GATCTTCATTCTTTTGGTCATTAGGCACTATAAACATATTCTCC-TCAA
1 TCGATTCTCA-TAATAG-TCTCCATTCTTTTTATGATTAGGAAC-ATAAACACATTC-CCTTCAT
* * * ** * * * * * ***
671271 TAGGATAAAGGATATTGATGATTTTTTTTTGTATGGAAATCTTTT-TTGTGCC-CTATTTTCCTT
62 TAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTT-T-CCACCATTTTTGAT
* * *
671334 AAAATCAAAGTT-GATCCTTTAAATAAGGCAAGCC
125 AAAATCAAAGTTCG-TCC-TTAAAT-AGACAAACA
* ** * * *
671368 TTGATTCTCATAGCAGTCTCCATTCTTTTCATGATTTGGATGCCA-AAACACATTCCCTTCATTA
1 TCGATTCTCATAATAGTCTCCATTCTTTTTATGATTAGGA--ACATAAACACATTCCCTTCATTA
** * * * * * * ** *
671432 GGGCAAATGACATTGATGCTTTGGGTT-GCAAGAAAAGCTTTTCTTTTGC-CCGTTTTTTTTAGA
64 GGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTC-TTTCCACCATTTTTGATAAA
* *
671495 ATCAAAGTTTGTCTCTCAAATATGACAAACA
128 ATCAAAGTTCGTC-CTTAAATA-GACAAACA
** * * * * * * * *
671526 TTAATTCTCATACTAATCCCCATTCTTTTCAAGATTA-GACACTATAAACATAGTCTCC-TCGTT
1 TCGATTCTCATAATAGTCTCCATTCTTTTTATGATTAGGA-AC-ATAAACACATTC-CCTTCATT
* * * * * * *
671589 CGAATACATCATAATGATGCTTTGGTTTTGTAAGAAAAGCTTTT-TTCCCACCAATTTTTG-TGA
63 AGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAA
* * *
671652 AGTCTATGTTCGTGCCTTAAATGAGACAAACA
127 AATCAAAGTTCGT-CCTTAAAT-AGACAAACA
** * * * * * * * *
671684 GGGATTCT-AGTAA-AGATCTTCGTCCATTTTGTGATTAGGTACTATAAACACATTCTGC-TCGT
1 TCGATTCTCA-TAATAG-TCTCCATTCTTTTTATGATTAGGAAC-ATAAACACATTC-CCTTCAT
* * ** * * * * **
671746 TAGGATAAATGATATTGATGATTTTATTTTGTATGAAAATCTTTTCTTTGCC-CTATTTTTCTTA
62 TAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTT-CCACCATTTTTGATA
** * * *
671810 AAATCAAAGTTAATCCTTTAAAAAAGGCAAGCA
126 AAATCAAAGTTCGTCC-TT-AAATAGACAAACA
* * * * * *
671843 TCAATTCTCATAACAGTCTCCATTCTTTTCAAGATT-GAGAAGCAAAAACACATTTCCTTCATTA
1 TCGATTCTCATAATAGTCTCCATTCTTTTTATGATTAG-GAA-CATAAACACATTCCCTTCATTA
* * *** * * *
671907 GGATGCATGACATTGATGCTTTGCCATCGTAAGAAAAGCTTTTCTTTCCCCCAATTTTGATAGAA
64 GGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAA
* * *
671972 TCAAAGTTTGTCTCTTAAAAATGACAAAAA
129 TCAAAGTTCGTC-CTTAAATA-GACAAACA
* * * * * * * * *
672002 T-GAATACTCATACTAATC-CTCGTTCTTTTTAGGATTACGCAACATAAACATAGTCTTCTT-AT
1 TCG-ATTCTCATAATAGTCTC-CATTCTTTTTATGATTA-GGAACATAAACACATTC-CCTTCAT
* ** * *
672064 TAGGATACATCATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTTTCACACCAATTTTTG-T
62 TAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGAT
** * * *
672128 AATGTCTAAGTTCGTGCCTCT-AATGAGATAAACT
125 AAAATCAAAGTTCGT-CCT-TAAAT-AGACAAACA
* ** * *
672162 TGGATTCT-AGTAA-AGATCGT-TTTTCATTTTT-TGAATAGGTACTATAAACA-ATTCTCC-TC
1 TCGATTCTCA-TAATAG-TC-TCCATTC-TTTTTATGATTAGGAAC-ATAAACACATTC-CCTTC
* ** * * * * * ***** **
672221 -TTCAGGATAAATGATATTGAT-CATTTTATTTTGCATGGAAATCTTTTCTTTATGTTATTTTCC
60 ATT-AGGATACATGATATTGATGC-TTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTG
* * * * * *
672284 TTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCT
123 ATAAAATCAAAGTTCGTCC-TTAAATAGA-CAAACA
* * * * * * *
672320 TCGATTCTCATAATAGCCCCCATTCTTTTTAAGATTTGGGAAGCGA-ACACATATTTCCCTT-GT
1 TCGATTCTCATAATAGTCTCCATTCTTTTTATGA-TTAGGAA-C-ATAAACACA-TTCCCTTCAT
* * * * *
672383 TAGGATACATGAAATTGATGC-TTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAA
62 TAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAA
*
672447 AATCAAAGTTTGTCACTTAAATACGACAAACA
127 AATCAAAGTTCGTC-CTTAAATA-GACAAACA
* * * * * * * * * * *
672479 T-GAATACTAATACTAATCCCCATTCTTTTTAGGATTAGGCACCACAAACATAGTAT-TC-TCCT
1 TCG-ATTCTCATAATAGTCTCCATTCTTTTTATGATTAGG-AACATAAACACA-T-TCCCTTCAT
** * * * * * * *
672541 TAGGATATGTCATATTGACGCTTTGGTTTTGCAGGAAAGGC-TTTC-TTCCCCCTAATTTTT-AT
62 TAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACC--ATTTTTGAT
* * * * *
672603 AAAGTCTAAGTTCGTGCCTCAGATGCGACAAACA
125 AAAATCAAAGTTCGT-CCTTAAAT-AGACAAACA
* * ** * ** * * *
672637 TGGAATC-CAGTAAT-GATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCC-ACAT
1 TCGATTCTCA-TAATAG-TCTCCATTCTTTTTATGATTAGGAAC-ATAAACACATTC-CCTTCAT
* * ** * *
672699 TAGGATGA-ATGATATTGATGACTTT-CTTT--TACATGAAAATCTTTTCTGAGCC-CTATTTTC
62 TAGGAT-ACATGATATTGATG-CTTTGGTTTCGTA-A-GAAAAGCTTTTCT-TTCCACCATTTTT
** * * * *
672759 CTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCA
122 GATAAAATCAAAGTTCGTC-CTTAAATA-GACAAACA
* * * *
672796 TCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAG
1 TCGATTCTCATAATAGTCTCCATTCTTTTTATGATTAGGAA-CATAAACACATTCCCTTCATTAG
* * * *
672861 GATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
65 GATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAAT
*
672926 CAAAGTTTGTCTCTTAAATACGACAAACA
130 CAAAGTTCGTC-CTTAAATA-GACAAACA
* * * * * * ** * *
672955 T-GAATACTCATACTAATCCCCATTCTTTTCAAGATTA-GACACCATAAACGTAGT-CTTCTCAT
1 TCG-ATTCTCATAATAGTCTCCATTCTTTTTATGATTAGGA-A-CATAAACACATTCCCT-TCAT
* * * * * * *
673017 TTGAATACATCATAATGATGCTTTGGTTTTGTAAGAAAGGCTTTT-TTCCCACCAATTTTTG-TA
62 TAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATA
* * * *
673080 AAGTCTAAGTTCATGCCTCAAATCAGACAAACA
126 AAATCAAAGTTCGT-CCTTAAAT-AGACAAACA
* * * * *
673113 TGGATTCT-AGTAA-AGATCTTCATTCATTTTGTGATTACGGACCATAAACACATT
1 TCGATTCTCA-TAATAG-TCTCCATTCTTTTTATGATTA-GGAACATAAACACATT
673167 TTGCTCTTTA
Statistics
Matches: 2191, Mismatches: 679, Indels: 397
0.67 0.21 0.12
Matches are distributed among these distances:
155 5 0.00
156 40 0.02
157 105 0.05
158 617 0.28
159 1215 0.55
160 175 0.08
161 34 0.02
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (156 bp):
TCGATTCTCATAATAGTCTCCATTCTTTTTATGATTAGGAACATAAACACATTCCCTTCATTAGG
ATACATGATATTGATGCTTTGGTTTCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATC
AAAGTTCGTCCTTAAATAGACAAACA
Found at i:676226 original size:42 final size:42
Alignment explanation
Indices: 676165--676253 Score: 142
Period size: 42 Copynumber: 2.1 Consensus size: 42
676155 TAGCCCTCAA
676165 AGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
* * * *
676207 AGAGATAGTAGAGATAGGAGGGCTGATAGGAGGAGAGACAGG
1 AGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
676249 AGAGA
1 AGAGA
676254 CATGAGTGAT
Statistics
Matches: 43, Mismatches: 4, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
42 43 1.00
ACGTcount: A:0.43, C:0.03, G:0.46, T:0.08
Consensus pattern (42 bp):
AGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
Found at i:676250 original size:51 final size:51
Alignment explanation
Indices: 676195--676292 Score: 142
Period size: 51 Copynumber: 1.9 Consensus size: 51
676185 GGATGATAGG
* * * *
676195 AGGAGAGACAGGAGAGATAGTAGAGATAGGAGGGCTGATAGGAGGAGAGAC
1 AGGAGAGACAGGAGAGATAATAGAGAGAGGAGGGATGACAGGAGGAGAGAC
* *
676246 AGGAGAGACATGAGTGATAATAGAGAGAGGAGGGATGACAGGAGGAG
1 AGGAGAGACAGGAGAGATAATAGAGAGAGGAGGGATGACAGGAGGAG
676293 GAGAGAAGAA
Statistics
Matches: 41, Mismatches: 6, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
51 41 1.00
ACGTcount: A:0.40, C:0.05, G:0.45, T:0.10
Consensus pattern (51 bp):
AGGAGAGACAGGAGAGATAATAGAGAGAGGAGGGATGACAGGAGGAGAGAC
Found at i:682575 original size:475 final size:476
Alignment explanation
Indices: 680464--685761 Score: 6064
Period size: 476 Copynumber: 11.2 Consensus size: 476
680454 TGTCATCAAC
* *
680464 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTTTTTACCCTATTTTTCTTAAAATCAA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * * * * *
680529 AGTTAATCCTTTAAATGAGGCAAGCATCGATTCTTATAACAGTCTCTATTCTTTTCAAGATTGAG
66 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGG
* * *
680594 AAGTAAAAGCACATTCCCTTCATTAGGATGCATGACATAT-ATGCTTTGGTGTCGTAAGAAAAGC
131 AAGCAAAAACACATTCCCTTCATTAGGATACATGACAT-TGATGCTTTGGTGTCGTAAGAAAAGC
* * * * * * * * *
680658 TTTTCTTTCTATCGTTTTTTACAAAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATACTA
195 TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTC
* * * * * * *
680723 ATAATAATCTCCGTTTTTTTCAGGATTAGGTACCATAAACATAGTCTTCTTTTTA-GTTGACA-C
260 ATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGAT-ACATC
* * * *
680786 GAT-TTGATGCTTTAG-TTTGCAAGAAAGGCTTTCTTGCCC-CCAATTTTTATAAAGTCTAAATT
324 -ATATTGATGCTTTGGTTTTGCAAGAAAGGCTTT-TTTCCCACCAATTTTTGTAAAGTCTAAGTT
* * * *
680848 CGTGCCTCAAATGAGACAAACATGGATTCTAGCAATGATCTTTATTCATTTAGTGATTTGGCACT
387 CGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACT
680913 ATAAACACATTCTCCTC--------
452 ATAAACACATTCTCCTCATTAGGAT
* * * *
680930 -----ATATTGATGATTTTCTTTTGCAATGGAAATCTTTTC-TTAGCCTTATTTTCCTTAAATTC
1 AAATGATATTGATGATTTTATTTTGC-ATGAAAATCTTTTCTTTA-CCCTATTTTCCTTAAAATC
* * * * * ** *
680989 AACGTTCATCTTTTAAATATGGCAAGCTTTGATTCTCGGAATAGTCTCCATTCTTTTTAAGATTG
64 AAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTG
* ** * *
681054 GGTAGCAAAAACTTATTCCCTTCATTAGGATACATGACATTGATTCATTGGTGTCGTAAGAAAAG
129 GGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAG
* *
681119 CTTTTCTTTTCCACCAATTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAGACATGAATAC
194 CTTTTC-TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATAC
* * * * * *
681184 TCATATTGGACAGCATTCCGTTCCTTTTC-GGATT-GGACAGCATAAACATAGTGTTCTTATTAG
258 TCATACT--A-ATC--CCCATT-CTTTTCAGGATTAGG-CACCATAAACATAGTCTTCTTATTAG
* * * * *
681247 GATACATCATATTGATGCTTTGGTTTCGTATGAAAGGCTTTCTTTTCACACCAATTTTTGTAAAA
316 GATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGC-TT-TTTTCCCACCAATTTTTGTAAAG
* * * * * * *
681312 TCTAAGTTCGTGCCTCTAATAAGATAAACATGGATTCTAGTAAAGATATTTTTTCATTTTTTGAA
379 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGAT
*
681377 TAGGTACTATAAACA-ATTCTCCTC-TTCAGGAT
444 TAGGCACTATAAACACATTCTCCTCATT-AGGAT
* ** *
681409 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAAACAA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * ** * * * *
681474 TGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCTTTTTAAGATTGGG
66 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGG
* * * * *
681539 AAGCGAACACACATTCCCCTT-ATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGT
131 AAGCAAAAACACATT-CCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGC
* * *
681603 TTTTCTTTCCACCGTTTTCT-ATAAAATCAAAGTTTATCTCTTAAATACGACAAACATGAATACT
195 TTTTCTTTCCACCATTTT-TGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACT
* * * * ** * *
681667 -A-A-T--T-CTCATTCTTTCCAGGATTAGGCACGACAAACGCAGTCTTCTCATTGGGATACATC
259 CATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATC
* * * **
681726 ATATTGACGCTTTGGTTTT-AAAGGAAAGGCTTTTTTCCTACCAATTTTCATAAAGTCTAAGTTC
324 ATATTGATGCTTTGGTTTTGCAA-GAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTC
* * *
681790 GTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTGGTCATTAGGCACT
388 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACT
* * * *
681854 ATAAATATATTATCCTCAATAGGAT
452 ATAAACACATTCTCCTCATTAGGAT
* * *
681879 AAATGATATTGATGATTTT-TTTTGTATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * * * ** * *
681943 AGTTCATCCTTTAAATAAGGCAAGCCTCAAATCTCGTAGCAGTCTCCATTCTTTTCATGATT-TG
66 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGG
* ** * * * *
682007 AATGCCAAAACACATTCCCTTCATTAGGGCAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGC
131 AA-GCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGC
* * * * *
682072 TTTTCTTT-CACCCGTTTTTGATAGAATCAAAG-TTGGCTTTTAAATATGACAAACATGAATACA
195 TTTTCTTTCCA-CCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACT
* * ** * *
682135 CATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCGTTCGAATACATC
259 CATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATC
* * * *
682200 ATAATGTTGCTTTGGTTTTGTAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCA
324 ATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCG
* * * * *
682265 TGCCTCCAATGAGACAAACATGAATTCTAGTAAAGATTTTTGTTCATTTTGTGATTAGGTACTAT
389 TGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTAT
* * * *
682330 AAACACATTTTGCTCACTAGGAC
454 AAACACATTCTCCTCATTAGGAT
*
682353 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * * * *
682418 TGTTAATCCTTTAAATAAGGCAAGCATCAATTCTCTTAATAGTCTCCATTCTTTTCAAGATTGAG
66 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGG
* * *
682483 AAGCAAAAACACATTCCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGTAAGAAAAGAT
131 AAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCT
* * *
682548 TTTCTTTCCATCATTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACAAG-A-A-T-A
196 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCA
* * * * *
682609 T--TGA-CCCC-GTCTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATACATGAT
261 TACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCAT
* * * *
682670 ATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCTC-CTAATTTTTATAAAGTCTACGTTCGT
326 ATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCC-CACCAATTTTTGTAAAGTCTAAGTTCGT
* * * * * *
682734 GCCTTAAATGAGACAAACATGGAATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATA
390 GCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATA
682799 AACACATTCTCCTCATTAGGAT
455 AACACATTCTCCTCATTAGGAT
* * * *
682821 GAACGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC-TGAGCCCTATTTTCCTTAAAATCA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCCTATTTTCCTTAAAATCA
* * * * *
682885 AAGTTAATCTTTTAAATATA-GCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAACATTG
65 AAGTTCATCCTTTAAATA-AGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTG
*
682949 GGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAG
129 GGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAG
* * *
683014 CTTTTCTTTCCACAATTTTTGATAGAATTAAAGTTTGTCTCTTAAATACGACAAACATGAAAACT
194 CTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACT
* * * *
683079 TATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACTTAGTCTTCTTATTAGGATACATC
259 CATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATC
* * * *
683144 ATATTGATGCTTTGGTTTCT-TAAGAAAGGCTTTTTTTTCACACCCATTTTTGTAAAGTCTATGT
324 ATATTGATGCTTTGGTTT-TGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAGTCTAAGT
** * * * * * * **
683208 TCGTGCCTGTAGTGAGATAAACATGGATTCTAGTAAAG-TGTTTTTTTCATTTTTTGAATAGGTG
386 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT-CTTTATTCATTTTGTGATTAGGCA
*
683272 CTATAAACA-ATTCTCCTCTTTAGGAT
450 CTATAAACACATTCTCCTCATTAGGAT
* ** *
683298 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAAACAA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * ** * * * * *
683363 AGTACATCCTTTAAACAAACCAAGCTTCGATTCTTATAATAGCCCCCATTCTTTTTAAGATTGGG
66 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGG
** * * * *
683428 AAGTGAACACACATTCCCTTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCT
131 AAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCT
* * * * * * *
683493 TTTCTTTCCACCGTTTTTGATAAAATTAAAGTTTATCTCTCAAATATGACTAACATGAATA--CA
196 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCA
* * * * *
683556 TACTAATCCCCGTTCTTTTCAGGATTAAGCACCATAAACGTAGTCGTCTCATTAGGATACATCAT
261 TACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCAT
** * * * * * *
683621 ATTGATGCTTTGGTTTCACAGGAAAAGCTTTTTTCCTACTAATTTTCGTAAAGTCTAAGTTTGTG
326 ATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTG
* * * * *
683686 ACTCAAATGAGAGAAACATGGATTCCT-GTAATGATCTTCATTC-TTTTGGTCATTAGGCACTAT
391 CCTCAAATGAGACAAACATGGATT-CTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACTAT
683749 AAACACATTCTCCTC-TATAGGAT
454 AAACACATTCTCCTCAT-TAGGAT
* * * *
683772 AAATGATATTGATGATTTTCTTTTGCACGAAAATCTTTTCCTTGCCCTATTTTCCTTAAAATCAA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * ** ** * *
683837 AGTTCATCCTTTAAATAAGGCAAGCCTCAATTCTGGTAGCAGTCTCCATTCTTTTCAGGATTTGG
66 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGG
* * ** * * * * *
683902 ATGCCAAAACACATTCCCTTCATTAGGGCAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGAT
131 AAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCT
*
683967 TTTCTTT-CACCTATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTC
196 TTTCTTTCCACC-ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTC
* * * * * *
684031 ATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGTTTTCTCATTTGAATACATCA
260 ATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCA
* * * * *
684096 TAATGATGCTTTGGTTTTGCGAGAAAGGCATTTTTGCCACCAATTTTTGTAAAGTCTAAGTTCAT
325 TATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGT
* * * * * *
684161 GCCTCAAATGAGATAAACATGGATTCTAGTAAAGACCTTCGA-TCATTTTATGATTAGGTACTAC
390 GCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTT-TATTCATTTTGTGATTAGGCACTAT
* * *
684225 AAACACAATCTGCTCTTTAGGAT
454 AAACACATTCTCCTCATTAGGAT
*
684248 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCCTATTATT-CTTAAAATCA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATT-TTCCTTAAAATCA
*
684312 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
65 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGG
* * * *
684377 GAAGCAAAAACATATTCCTTTCATTAGGATGCAAGACATTGATGCTTTGGTGTCGTAAGAAAAGC
130 GAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGC
* * * * * *
684442 TTTTCTTTCCACCAATTTTAACAGAGTCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACTG
195 TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTC
* * * * * * *
684507 ATAATAAT-CCCTTTTTTTTCAAGATTAGGTACAATAAACGTAGTCTTCTTATTAGGATACA-CA
260 ATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATC-
* * * * *
684570 ACATTGATGCTTTGGTTTCGCAAGGAAGGCTTTCTTCCC-CCTAATTTTTATAAAGTCTAAGTTC
324 ATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACC-AATTTTTGTAAAGTCTAAGTTC
** *
684634 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTCGGTGATTTGGCACTA
388 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTA
684699 TAAACACATTCTCCTCATTAGGAT
453 TAAACACATTCTCCTCATTAGGAT
* * *
684723 GAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC-TGAGCCCTATTTTCCTTAAAATCA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-CCCTATTTTCCTTAAAATCA
* * * * *
684787 AAGTTAATCTTTTAAATATGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAACATTGG
65 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGG
*
684852 GAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGC
130 GAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGC
* *
684917 TTTTCTTTCCACCATTTTTGATAGAATTACAA-TTTGTCTCTTAAATACGACAAACATGAAAACT
195 TTTTCTTTCCACCATTTTTGATAGAATCA-AAGTTTGTCTCTTAAATACGACAAACATGAATACT
* * * * *
684981 TATACTAATCCCCGTTCCTTTT-AGGATTAGGTAGCATAAACTTAGTCTTCTTATTAGGATACAT
259 CATACTAATCCCCATT-CTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACAT
* *
685045 CATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCACACCAATTTTTGTAAAGTCTAAGTT
323 CATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTTCCCACCAATTTTTGTAAAGTCTAAGTT
* * * *
685110 CGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCATTT-TTCATTTTGTGAATAGGTAC
387 CGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATC-TTTATTCATTTTGTGATTAGGCAC
685174 TATAAACA-ATTCTCCTC-TTCAGGAT
451 TATAAACACATTCTCCTCATT-AGGAT
* * ** *
685199 AAATGATATTGATGATTTTATTTTGCGA-GGAAATATTTTCTTTACGTTATTTTCCTTCAAATCA
1 AAATGATATTGATGATTTTATTTTGC-ATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
* * ** * * *
685263 AAGTTCATCCTTCAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCCTTTT-AAGATTG
65 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATT-CTTTTCAAGATTG
* * * * * * *
685327 GGAAACGAACACACATTCACTTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAG
129 GGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAG
* * *
685392 CTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACT
194 CTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACT
* * * * * *
685457 CAAACTAATCCTCATTCTTTTCAAGATTAGGCACCAT-AACGTAGTCTCCTCATTAGGATACATC
259 CATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATC
* * * * *
685521 ATATTGACGCTTTGGTTTCGCAGGAAAGG-GTTTTTCCCTACCAATTTTTGTAAAGTCTAAGTTT
324 ATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCC-ACCAATTTTTGTAAAGTCTAAGTTC
* * * * * * *
685585 GTGACTCAAATGAGACAAACATGGATTCTTGTAAGGATATTCATTC-TTTTGGTCATTAGACACT
388 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTT-GTGATTAGGCACT
* *
685649 ATAAACAGATTCTCCTCAATAGGAT
452 ATAAACACATTCTCCTCATTAGGAT
* * * * * *
685674 AAATGATATTGACGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTGCTTACAATAAA
1 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
*
685739 AGGTCATCCTTTAAATAAGGCAA
66 AGTTCATCCTTTAAATAAGGCAA
685762 ACCACGTTTG
Statistics
Matches: 4077, Mismatches: 642, Indels: 217
0.83 0.13 0.04
Matches are distributed among these distances:
461 24 0.01
462 140 0.03
463 53 0.01
465 1 0.00
466 2 0.00
467 4 0.00
468 473 0.12
469 267 0.07
470 55 0.01
471 76 0.02
472 91 0.02
473 93 0.02
474 500 0.12
475 815 0.20
476 822 0.20
477 351 0.09
478 87 0.02
479 1 0.00
480 1 0.00
481 1 0.00
482 52 0.01
483 140 0.03
484 28 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (476 bp):
AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGG
AAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCT
TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCA
TACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACATCAT
ATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTG
CCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAA
ACACATTCTCCTCATTAGGAT
Found at i:683808 original size:951 final size:950
Alignment explanation
Indices: 680464--685755 Score: 6491
Period size: 951 Copynumber: 5.6 Consensus size: 950
680454 TGTCATCAAC
* * *
680464 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTTTTTACCCTATTTTTCTTAAAATCAA
1 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
** ** * * * * * *
680529 AGTTA-ATCCTTTAAATGAGGCAAGCATCGATTCTTATAACAGTCTCTATTCTTTTCAAGATTGA
66 AG-TACATCCTTTAAACAAACCAAGCATCGATTCTCATAATAGCCCCCATTCTTTTCAAGATTGG
* * * * *
680593 GAAG-TAAAAGCACATTCCCTTCATTAGGATGCATGACATAT-ATGCTTTGGTGTCGTAAGAAAA
130 GAAGCGAAAA-CACATTCCCTTTATTAGGATACATGAAAT-TGATGCTTTGGTGTCATAAGAAAA
* * * *
680656 GCTTTTCTTTCTATCGTTTTTTACAAAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATAC
193 GCTTTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATAC
* * * * * ** *
680721 TAATAATAATCTCCGTTTTTTTCAGGATTAGGTACCATAAACATAGTCTTCTTTTTA-GTTGACA
258 --ATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGAT-ACA
* * *
680785 -CGAT-TTGATGCTTTAGTTTGCA-A-GAAAGGCTTTCTTGCC-CCCAATTTTTATAAAGTCTAA
320 TC-ATATTGATGCTTTGGTTT-CACAGGAAAGGCTTT-TTTCCTACCAATTTTTATAAAGTCTAA
* * * * * *
680845 ATTCGTGCCTCAAATGAGACAAACATGGATTCTAGCAATGATCTTTATTCATTTAGTGATTTGGC
382 GTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTGGTCATTAGGC
*
680910 ACTATAAACACATTCTCCTC------------ATATTGATGATTTTCTTTTGCAATGGAAATCTT
447 ACTATAAACACATTCTCCTCATAGGATAAATGATATTGATGATTTTCTTTTGC-ATGAAAATCTT
* * * * * * * *
680963 TTCTTAGCCTTATTTTCCTTAAATTCAACGTTCATCTTTTAAATATGGCAAGCTTTGATTCTCGG
511 TTCTTAGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATAGCAAGCATCGATTCTCGT
* **
681028 AATAGTCTCCATTCTTTTTAAGATTGGGTAGCAAAAACTTATTCCCTTCATTAGGATACATGACA
576 AATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACA
* * *
681093 TTGATTCATTGGTGTCGTAAGAAAAGCTTTTCTTTTCCACCAA-TTTTGATAGAATCAAAGTTTG
641 TTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC-TTTCCACCAATTTTTGATAGAATCAAAGTTTG
* * * * * * *
681157 TCTCTTAAATACGACAGACATGAATACTCATATTGGACAGCATTCCGTTCCTTTTCGGATT-GGA
705 TCTCTTAAATACGACAAACATGAATACTCATACT--A-ATC--CCCATTCTTTTTAGGATTAGG-
* * *
681221 CAGCATAAACATAGTGTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGTATGAAAGGCT
764 CAGCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCTTAAGAAAGGCT
* *
681286 TTCTTTTCACACCAATTTTTGTAAAATCTAAGTTCGTGCCTCTAATAAGATAAACATGGATTCTA
829 TT-TTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTA
* * *
681351 GTAAAGATATTTTTTCATTTTTTGAATAGGTACTATAAACAATTCTCCTCTTCAGGAT
893 GTAAAGATCTTTTTTCATTTTGTGAATAGGTACTATAAACAATTCTCCTCTTTAGGAT
** *
681409 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAAACAA
1 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * * *
681474 TGTTCATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCTTTTTAAGATTGGG
66 AGTACATCCTTTAAACAAACCAAGCATCGATTCTCATAATAGCCCCCATTCTTTTCAAGATTGGG
* * *
681539 AAGCGAACACACATTCCCCTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGTT
131 AAGCGAAAACACATTCCCTTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCT
* * *
681604 TTTCTTTCCACCGTTTTCT-ATAAAATCAAAGTTTATCTCTTAAATACGACAAACATG---A-AT
196 TTTCTTTCCACCGTTTT-TGACAAAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACAT
* * * * * * * *
681664 ACTAATTCTCATTCTTTCCAGGATTAGGCACGACAAACGCAGTCTTCTCATTGGGATACATCATA
260 ACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATA
* * * *
681729 TTGACGCTTTGGTTTTAAAGGAAAGGCTTTTTTCCTACCAATTTTCATAAAGTCTAAGTTCGTGC
325 TTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTTTTATAAAGTCTAAGTTCGTGC
*
681794 CTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTGGTCATTAGGCACTATAAA
390 CTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTGGTCATTAGGCACTATAAA
* * * * * *
681859 TATATTATCCTCAATAGGATAAATGATATTGATGATTTT-TTTTGTATGGAAATCTTTTCTTTGC
455 CACATTCTCCTC-ATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTAGC
* * * **
681923 CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATA-AGGCAAGCCTCAAATCTCGTAGCAGTC
519 CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATA-GCAAGCATCGATTCTCGTAATAGTC
* * * * ** *
681987 TCCATTCTTTTCATGATT-TGAATGCCAAAACACATTCCCTTCATTAGGGCAAATGACATTGATG
583 TCCATTCTTTTTAAGATTGGGAA-GCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
* * ** * *
682051 CTTTGGGGTTGCAAGAAAAGCTTTTCTTT-CACCCGTTTTTGATAGAATCAAAG-TTGGCTTTTA
647 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCAATTTTTGATAGAATCAAAGTTTGTCTCTTA
* * * * * *
682114 AATATGACAAACATGAATACACATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATA
712 AATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACATA
** * * * * *
682179 GTCTTCTCGTTCGAATACATCATAATGTTGCTTTGGTTT-TGTAAGAAAGGC-TTTTTTCCCACC
777 GTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCT-TAAGAAAGGCTTTTTTTCACACC
* * * *
682242 AATTTTTGTAAAGTCTAAGTTCATGCCTCCAATGAGACAAACATGAATTCTAGTAAAGAT-TTTT
841 AATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCTTTT
* * * ** *
682306 GTTCATTTTGTGATTAGGTACTATAAACACATTTTGCTCACTAGGAC
906 -TTCATTTTGTGAATAGGTACTATAAACA-ATTCTCCTCTTTAGGAT
* *
682353 AAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAA
1 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * ** * * * * *
682418 TGTTA-ATCCTTTAAATAAGGCAAGCATCAATTCTCTTAATAGTCTCCATTCTTTTCAAGATTGA
66 AG-TACATCCTTTAAACAAACCAAGCATCGATTCTCATAATAGCCCCCATTCTTTTCAAGATTGG
* * * *
682482 GAAGCAAAAACACATT-CCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGTAAGAAAAG
130 GAAGCGAAAACACATTCCCTTT-ATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAG
* * * *
682546 ATTTTCTTTCCATCATTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAAT--A
194 CTTTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACA
* * * * * *
682609 T--TGA-CCCCG-TCTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATACATGAT
259 TACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCAT
** * * *
682670 ATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCT-CCTAATTTTTATAAAGTCTACGTTCGT
324 ATTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACC-AATTTTTATAAAGTCTAAGTTCGT
* * * * * *
682734 GCCTTAAATGAGACAAACATGGAATCCAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATA
388 GCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTGGTCATTAGGCACTATA
* * *
682799 AACACATTCTCCTCATTAGGATGAACGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTGA
453 AACACATTCTCCTCA-TAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTA
* *
682864 GCCCTATTTTCCTTAAAATCAAAGTTAATCTTTTAAATATAGCAAGCATCGATTCTCGTAATAGT
517 GCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATAGCAAGCATCGATTCTCGTAATAGT
*
682929 CTCCATTCTTTTTAACATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
582 CTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
** *
682994 CTTTGGTGTCATAAGAAAAGCTTTTCTTTCCA-CAATTTTTGATAGAATTAAAGTTTGTCTCTTA
647 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCAATTTTTGATAGAATCAAAGTTTGTCTCTTA
* * *
683058 AATACGACAAACATGAAAACTTATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACTTA
712 AATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACATA
683123 GTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCTTAAGAAAGGCTTTTTTTTCACACC
777 GTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCTTAAGAAAGGC-TTTTTTTCACACC
* * * * *
683188 CATTTTTGTAAAGTCTATGTTCGTGCCTGTAGTGAGATAAACATGGATTCTAGTAAAG-TGTTTT
841 AATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGAT-CTTT
* *
683252 TTTCATTTTTTGAATAGGTGCTATAAACAATTCTCCTCTTTAGGAT
905 TTTCATTTTGTGAATAGGTACTATAAACAATTCTCCTCTTTAGGAT
** *
683298 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAAACAA
1 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * *
683363 AGTACATCCTTTAAACAAACCAAGCTTCGATTCTTATAATAGCCCCCATTCTTTTTAAGATTGGG
66 AGTACATCCTTTAAACAAACCAAGCATCGATTCTCATAATAGCCCCCATTCTTTTCAAGATTGGG
* *
683428 AAGTGAACACACATTCCCTTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCT
131 AAGCGAAAACACATTCCCTTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCT
* * * * * * *
683493 TTTCTTTCCACCGTTTTTGATAAAATTAAAGTTTATCTCTCAAATATGACTAACATGAATACATA
196 TTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACATA
* *
683558 CTAATCCCCGTTCTTTTCAGGATTAAGCACCATAAACGTAGTCGTCTCATTAGGATACATCATAT
261 CTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATAT
* * ** * *
683623 TGATGCTTTGGTTTCACAGGAAAAGCTTTTTTCCTACTAATTTTCGTAAAGTCTAAGTTTGTGAC
326 TGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTTTTATAAAGTCTAAGTTCGTGCC
* *
683688 TCAAATGAGAGAAACATGGATTCCT-GTAATGATCTTCATTCTTTTGGTCATTAGGCACTATAAA
391 TCAAATGAGACAAACATGGATT-CTAGTAATGATCTTCATTCATTTGGTCATTAGGCACTATAAA
*
683752 CACATTCTCCTCTATAGGATAAATGATATTGATGATTTTCTTTTGCACGAAAATCTTTTCCTT-G
455 CACATTCTCCTC-ATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTT-CTTAG
* * * **
683816 CCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATA-AGGCAAGCCTCAATTCTGGTAGCAGT
518 CCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATA-GCAAGCATCGATTCTCGTAATAGT
* * * * * ** *
683880 CTCCATTCTTTTCAGGATTTGGATGCCAAAACACATTCCCTTCATTAGGGCAAATGACATTGATG
582 CTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
* * * *
683945 CTTTGGGGTTGCAAGAAAAGATTTTCTTT-CACCTATTTTTGATAGAATCAAAGTTTGTCTCTTA
647 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCAATTTTTGATAGAATCAAAGTTTGTCTCTTA
* * * * *
684009 AATATGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATA
712 AATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACATA
* * * * * ** * *
684074 GTTTTCTCATTTGAATACATCATAATGATGCTTTGGTTT-TGCGAGAAAGGCATTTTTGC-CACC
777 GTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCT-TAAGAAAGGCTTTTTTTCACACC
* * * **
684137 AATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGATAAACATGGATTCTAGTAAAGACCTTCG
841 AATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCTTTT
* * * * * *
684202 ATCATTTTATGATTAGGTACTACAAACACAATCTGCTCTTTAGGAT
906 TTCATTTTGTGAATAGGTACTATAAACA-ATTCTCCTCTTTAGGAT
684248 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCCTATTATT-CTTAAAATCA
1 AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCCTATT-TTCCTTAAAATCA
* * ** * * *
684312 AAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
65 AAGTACATCCTTTAAACAAACCAAGCATCGATTCTCATAATAGCCCCCATTCTTTTCAAGATTGG
* * * * * *
684377 GAAGCAAAAACATATT-CCTTTCATTAGGATGCAAGACATTGATGCTTTGGTGTCGTAAGAAAAG
130 GAAGCGAAAACACATTCCCTTT-ATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAG
** * * *
684441 CTTTTCTTTCCACCAATTTTAACAGAGTCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACT
194 CTTTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATAC-
* * * * * * *
684506 GATAATAAT-CCCTTTTTTTTCAAGATTAGGTACAATAAACGTAGTCTTCTTATTAGGATACA-C
258 -ATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATC
* * * *
684569 AACATTGATGCTTTGGTTTCGCAAGG-AAGGCTTTCTTCC-CCCTAATTTTTATAAAGTCTAAGT
322 -ATATTGATGCTTTGGTTTCAC-AGGAAAGGCTTTTTTCCTACC-AATTTTTATAAAGTCTAAGT
* * * * *
684632 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTCGGTGATTTGGCAC
384 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTGGTCATTAGGCAC
*
684697 TATAAACACATTCTCCTCATTAGGATGAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTT
449 TATAAACACATTCTCCTCA-TAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTT
* * * * *
684762 CTGAGCCCTATTTTCCTTAAAATCAAAGTTAATCTTTTAAATATGGCAAGCATCGATTCTCATAA
513 CTTAGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATAGCAAGCATCGATTCTCGTAA
*
684827 TAGTCTCCATTCTTTTTAACATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATT
578 TAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATT
*
684892 GATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAGAATTACAA-TTTGTC
643 GATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCAATTTTTGATAGAATCA-AAGTTTGTC
* * * * *
684955 TCTTAAATACGACAAACATGAAAACTTATACTAATCCCCGTTCCTTTTAGGATTAGGTAGCATAA
707 TCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAA
* **
685020 ACTTAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCA
772 ACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCTTAAGAAAGGCTTTTTTTCA
685085 CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATC
837 CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATC
* *
685150 ATTTTTCATTTTGTGAATAGGTACTATAAACAATTCTCCTCTTCAGGAT
902 TTTTTTCATTTTGTGAATAGGTACTATAAACAATTCTCCTCTTTAGGAT
* ** *
685199 AAATGATATTGATGATTTTATTTTGCGA-GGAAATATTTTCTTTACGTTATTTTCCTTCAAATCA
1 AAATGATATTGATGATTTTATTTTGC-ATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
* * *
685263 AAGTTCATCCTTCAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCCTTTT-AAGATTG
65 AAGTACATCCTTTAAACAAACCAAGCATCGATTCTCATAATAGCCCCCATT-CTTTTCAAGATTG
* * *
685327 GGAAACGAACACACATTCACTTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAG
129 GGAAGCGAAAACACATTCCCTTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAG
* * *
685392 CTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACT
194 CTTTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATA--
* * * * *
685457 CAAACTAATCCTCATTCTTTTCAAGATTAGGCACCAT-AACGTAGTCTCCTCATTAGGATACATC
257 CATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATC
* * * * * *
685521 ATATTGACGCTTTGGTTTCGCAGGAAAGGGTTTTTCCCTACCAATTTTTGTAAAGTCTAAGTTTG
322 ATATTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTTTTATAAAGTCTAAGTTCG
* * * * * *
685586 TGACTCAAATGAGACAAACATGGATTCTTGTAAGGATATTCATTCTTTTGGTCATTAGACACTAT
387 TGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTGGTCATTAGGCACTAT
* *
685651 AAACAGATTCTCCTCAATAGGATAAATGATATTGACGATTTTCTTTTGCATGAAAATCTTTTCTT
452 AAACACATTCTCCTC-ATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTT
* * * * *
685716 TGCCCTATTTTGCTTACAATAAAAGGTCATCCTTTAAATA
516 AGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATA
685756 AGGCAAACCA
Statistics
Matches: 3692, Mismatches: 564, Indels: 176
0.83 0.13 0.04
Matches are distributed among these distances:
939 46 0.01
940 21 0.01
941 107 0.03
942 193 0.05
943 267 0.07
944 346 0.09
945 500 0.14
946 98 0.03
947 8 0.00
948 1 0.00
949 88 0.02
950 292 0.08
951 1420 0.38
952 285 0.08
953 6 0.00
954 14 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (950 bp):
AAATGATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
AGTACATCCTTTAAACAAACCAAGCATCGATTCTCATAATAGCCCCCATTCTTTTCAAGATTGGG
AAGCGAAAACACATTCCCTTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCT
TTTCTTTCCACCGTTTTTGACAAAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACATA
CTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATAT
TGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTTTTATAAAGTCTAAGTTCGTGCC
TCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTGGTCATTAGGCACTATAAAC
ACATTCTCCTCATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTAGCCC
TATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATAGCAAGCATCGATTCTCGTAATAGTCTCC
ATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTT
GGTGTCGCAAGAAAAGCTTTTCTTTCCACCAATTTTTGATAGAATCAAAGTTTGTCTCTTAAATA
CGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACATAGTCT
TCTTATTAGGATACATCATATTGATGCTTTGGTTTCTTAAGAAAGGCTTTTTTTCACACCAATTT
TTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCTTTTTTCAT
TTTGTGAATAGGTACTATAAACAATTCTCCTCTTTAGGAT
Found at i:684921 original size:159 final size:157
Alignment explanation
Indices: 680960--685547 Score: 735
Period size: 159 Copynumber: 29.0 Consensus size: 157
680950 CAATGGAAAT
* * * * * * * * *
680960 CTTTTCTTAGCCTTATTTTCCTTAAATTCAACGTTCATCTTTTAAATATGGCAAGCTTTGATTCT
1 CTTTTCTTACCCCTATTTT-CTTAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCGATTCT
** * **
681025 CGGAATAGTCTCCATTCTTTTTAAGATTGGGTAGCAAAAACTTATTC-CCTTCATTAGGATACAT
64 CATAATAGTCTCCATTCTTTTTAAGATTGGG-AACAAAAACACATTCTCCTTCATTAGGATACAT
* * *
681089 GACATTGATTCATTGGTGTCGTAAGAAAAG
128 GACATTGATGCTTTGGTGTCGCAAGAAAAG
* * ** * ** * *
681119 CTTTTCTTTTCCACCAATTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAGACAT-GAATA
1 CTTTTC-TTACC-CCTATTTTCTTAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCG-ATT
* * * ** * * * * *
681183 CTCATATTGGACAG-CATTCCGTTCCTTTTCGGATT-GGACAGCATAAACATAGTGTTCTT-ATT
62 CTCATA----ATAGTC--TCCATTCTTTTTAAGATTGGGA-A-CAAAAACACATTCTCCTTCATT
* * * * * *
681245 AGGATACATCATATTGATGCTTTGGTTTCGTATGAAAGG
119 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * * *
681284 CTTTCTTTTCACACCAATTTT-TGTAAAATCTAAGTTCGTGC-CTCT-AATAAGATAAACATGGA
1 CTTT-TCTT-ACCCCTATTTTCT-TAAAATCAAAGTTCAT-CTCT-TAAAT-AGACAAACATCGA
* *** * * * * *
681346 TTCT-AGTAA-AGATATTTTTTCATTTTT-TGAATAGGTACTATAAACA-ATTCTCC-TC-TTCA
60 TTCTCA-TAATAG-TCTCCATTC-TTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCATT-A
* * * ** * * * * *
681405 GGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
120 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
** * * * * * *
681443 CTTTTCTTTA-CGTTATTTTCCTTAAAAACAATGTTCATC-CTTTAAACAAACCAAGCTTCGATT
1 CTTTTC-TTACCCCTATTTT-CTTAAAATCAAAGTTCATCTC-TTAAATAGA-CAAACATCGATT
* * * * *
681506 CTCATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCGAACACACATTCCCCTT-ATTAGGATAC
62 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAA-CAAAAACACATTCTCCTTCATTAGGATAC
* **
681570 ATGAAATTGATGCTTTGGTGTCATAAGAAAAG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * *
681602 TTTTTCTTTCCACC-GTTTTCTATAAAATCAAAGTTTATCTCTTAAATACGACAAACAT-GAAT-
1 CTTTTCTTACC-CCTATTTTCT-TAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCGATTC
* ** * * * * * * * *
681664 AC-TAAT--TCT-CATTCTTTCCAGGATTAGGCACGACAAACGCAGTCTTC-TCATTGGGATACA
63 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCATTAGGATACA
* * * *** *
681724 TCATATTGACGCTTTGGT-TTTAAAGGAAAGG
127 TGACATTGATGCTTTGGTGTCGCAA-GAAAAG
* * * * * * *
681755 CTTTT-TT-CCTACCAATTTTCATAAAGTCTAAGTTCGTGC-CTCAAATGAGACAAACATGGATT
1 CTTTTCTTACC--CCTATTTTCTTAAAATCAAAGTTCAT-CTCTTAAAT-AGACAAACATCGATT
* **** * * * * * * *
681817 CT-AGTAAT-GATCTTCATTCTTTTGGTCATTAGGCACTATAAATATATTATCC-TCAATAGGAT
62 CTCA-TAATAG-TCTCCATTCTTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCATTAGGAT
* * * * * * * * * *
681879 AAATGATATTGATGATTT-TTTTTGTATGGAAAT
124 ACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
** * * * * *
681912 CTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCCTCAAATC
1 CTTTTCTTACCCCTATTTT-CTTAAAATCAAAGTTCATCTC-TTAAAT-AGACAAACATCGATTC
* ** * * * * ** *
681976 TCGTAGCAGTCTCCATTCTTTTCATGATT-TGAATGCCAAAACACATTC-CCTTCATTAGGGCAA
63 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAA--CAAAAACACATTCTCCTTCATTAGGATAC
* *
682039 ATGACATTGATGCTTTGGGGTTGCAAGAAAAG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* ** * ** * *
682071 CTTTTCTTTCACCCGT-TTTTGATAGAATCAAAGTT-GGCTTTTAAATATGACAAACAT-GAATA
1 CTTTTC-TT-ACCCCTATTTTCTTAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCG-ATT
* * * * * * * * * * * * *
682133 CACATACTAATCCCCATTCTTTTCAAGATT-AGACACCATAAACATAGTCTTC-TCGTTCGAATA
62 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGA-A-CAAAAACACATTCTCCTTCATTAGGATA
* * * * * * * *
682196 CATCATAATGTTGCTTTGGTTTTGTAAGAAAGG
125 CATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * **
682229 CTTTT-TTCCCACCAATTTT-TGTAAAGTCTAAGTTCATGC-CTCCAATGAGACAAACAT-GAAT
1 CTTTTCTTACC-CCTATTTTCT-TAAAATCAAAGTTCAT-CTCTTAAAT-AGACAAACATCG-AT
* *** * ** * * * * * *
682290 TCT-AGTAA-AGATTTTTGTTCATTTTGTGATTAGGTACTATAAACACATTTTGC-TCACTAGGA
61 TCTCA-TAATAG-TCTCCATTCTTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCATTAGGA
* * * * ** * * * *
682352 CAAATGATATTGATGATTTTATTTTGCATGAAAAT
123 TACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * *
682387 CTTTTCTTTA-CCCTATTTTTCTTAAAATCAATGTTAATC-CTTTAAATAAGGCAAGCATCAATT
1 CTTTTC-TTACCCCTA-TTTTCTTAAAATCAAAGTTCATCTC-TTAAAT-AGACAAACATCGATT
* * * * *
682450 CTCTTAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTC-CTTTCATTAGGATGC
62 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAA-CAAAAACACATTCTCCTTCATTAGGATAC
*
682514 ATGACATTGATGCTTTGGTGTCGTAAGAAAAG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * ** *
682546 ATTTTCTT-TCCATCATTTT-TGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACA-AGA--
1 CTTTTCTTACCCCT-ATTTTCTTA-A-AATCAAAGTTCATCTCTTAAATA-GACAAACATCGATT
* * ** * * * * * * *
682606 ---AT-ATTGAC-CCCGTCTTTTTAGGATTAGGTACCATAAACATAGTCTTCTT-ATTAGGATAC
62 CTCATAATAGTCTCCATTCTTTTTAAGATT-GGGAACAAAAACACATTCTCCTTCATTAGGATAC
* * * *
682665 ATGATATTGATGCTTTGGTTTTGCAAGAAAGG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * *
682697 C-TTTCTT-CCTCCTAATTTT-TATAAAGTCTACGTTCGTGC-CTTAAATGAGACAAACATGGAA
1 CTTTTCTTACC-CCT-ATTTTCT-TAAAATCAAAGTTCAT-CTCTTAAAT-AGACAAACATCGAT
** * *** * * *
682758 TC-CAGTAAT-GATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCC-TCATTAGGA
61 TCTCA-TAATAG-TCTCCATTCTTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCATTAGGA
* * * ** * * * *
682820 TGA-ACGATATTGATGATTTTCTTTTGCATGAAAAT
123 T-ACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * *
682855 CTTTTCTGAGCCCTATTTTCCTTAAAATCAAAGTTAATCTTTTAAATATAGCAAGCATCGATTCT
1 CTTTTCTTACCCCTATTTT-CTTAAAATCAAAGTTCATCTCTTAAATAGA-CAAACATCGATTCT
* *
682920 CGTAATAGTCTCCATTCTTTTTAACATTGGGAAGCAAAAACACATTC-CCTTCATTAGGATACAT
64 CATAATAGTCTCCATTCTTTTTAAGATTGGGAA-CAAAAACACATTCTCCTTCATTAGGATACAT
**
682984 GACATTGATGCTTTGGTGTCATAAGAAAAG
128 GACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * ** **
683014 CTTTTCTTTCCACAATTTT-TGATAGAATTAAAGTTTGTCTCTTAAATACGACAAACAT-GAAAA
1 CTTTTCTTACCCCTATTTTCT--TAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCG-ATT
* * * * * * * * ** * *
683077 CTTATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACTTAGTCTTCTT-ATTAGGATAC
62 CTCATAATAGTCTCCATTCTTTTTAAGATT-GGGAACAAAAACACATTCTCCTTCATTAGGATAC
* * * ** *
683141 ATCATATTGATGCTTTGGTTTCTTAAGAAAGG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * * * *
683173 CTTTTTTTTCACACCC-ATTTT-TGTAAAGTCTATGTTCGTGC-CTGT-AGTGAGATAAACATGG
1 C-TTTTCTT-AC-CCCTATTTTCT-TAAAATCAAAGTTCAT-CTCT-TAAAT-AGACAAACATCG
* *** * * * ** * *
683234 ATTCT-AGTAA-AGTGTTTTTTTCATTTTT-TGAATAGGTGCTATAAACA-ATTCTCC-TCTTTA
59 ATTCTCA-TAATAGT-CTCCATTC-TTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCATTA
* * * ** * * * * *
683294 GGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
120 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
** * * * * * *
683332 CTTTTCTTTA-CGTTATTTTCCTTAAAAACAAAGTACATC-CTTTAAACAAACCAAGCTTCGATT
1 CTTTTC-TTACCCCTATTTT-CTTAAAATCAAAGTTCATCTC-TTAAATAGA-CAAACATCGATT
* * * ** * *
683395 CTTATAATAGCCCCCATTCTTTTTAAGATTGGGAAGTGAACACACATTC-CCTTTATTAGGATAC
62 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAA-CAAAAACACATTCTCCTTCATTAGGATAC
* **
683459 ATGAAATTGATGCTTTGGTGTCATAAGAAAAG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* ** * * * * *
683491 CTTTTCTTTCCACCGT-TTTTGATAAAATTAAAGTTTATCTCTCAAATATGACTAACAT-GAAT-
1 CTTTTCTTACC-CC-TATTTTCTTAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCGATTC
* * * * * * * * * * * ** *
683553 ACATACTAATCCCCGTTCTTTTCAGGATTAAGCACCATAAACGTAGTCGT-C-TCATTAGGATAC
63 TCATAATAGTCTCCATTCTTTTTAAGATT-GGGAACAAAAACACATTC-TCCTTCATTAGGATAC
* * * * *
683616 ATCATATTGATGCTTTGGTTTCACAGGAAAAG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * ** ** * * *
683648 CTTTT-TT-CCTACTAATTTTCGTAAAGTCTAAGTTTGTGACTCAAATGAGAGAAACATGGATTC
1 CTTTTCTTACC-CCT-ATTTTCTTAAAATCAAAGTTCATCTCTTAAAT-AGACAAACATCGATTC
* * **** * * *
683711 -CTGTAAT-GATCTTCATTCTTTTGGTCATTAGGCACTATAAACACATTCTCC-TC-TATAGGAT
63 TC-ATAATAG-TCTCCATTCTTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCAT-TAGGAT
* * * ** * * * *
683772 AAATGATATTGATGATTTTCTTTTGCACGAAAAT
124 ACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * *
683806 CTTTTCCTT-GCCCTATTTTCCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCCTCAATT
1 CTTTT-CTTACCCCTATTTT-CTTAAAATCAAAGTTCATCTC-TTAAAT-AGACAAACATCGATT
** ** * * * * * ** *
683869 CTGGTAGCAGTCTCCATTCTTTTCAGGATTTGGATGCCAAAACACATTC-CCTTCATTAGGGCAA
62 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGA-ACAAAAACACATTCTCCTTCATTAGGATAC
* *
683933 ATGACATTGATGCTTTGGGGTTGCAAGAAAAG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * ** *
683965 ATTTTCTTTCACCTATTTT-TGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACAT-GAATA
1 CTTTTCTTACCCCTATTTTCT--TAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCG-ATT
* * * * * * * * * *
684028 CTCATACTAATCCCCATTCTTTTCAAGATT-AGACACCATAAACATAGTT-TTC-TCATTTGAAT
62 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGA-A-CAAAAACACA-TTCTCCTTCATTAGGAT
* * * * * * *
684090 ACATCATAATGATGCTTTGGTTTTGCGAGAAAGG
124 ACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * * * *
684124 CATTT-TTGCCACCAATTTT-TGTAAAGTCTAAGTTCATGC-CTCAAATGAGATAAACATGGATT
1 CTTTTCTTACC-CCTATTTTCT-TAAAATCAAAGTTCAT-CTCTTAAAT-AGACAAACATCGATT
* * * * * * * * * *
684186 CT-AGTAA-AGACCTTCGA-TCATTTTATGATTAGGTACTACAAACACAATCTGC-TCTTTAGGA
62 CTCA-TAATAG-TC-TCCATTCTTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCATTAGGA
* * * ** * * * * *
684247 TAAATGATATTGATGATTTTATTTTGCATGGAAAT
123 TACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* *
684282 CTTTTCTTTA-CCCTATTATTCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCATCGATT
1 CTTTTC-TTACCCCTATT-TTCTTAAAATCAAAGTTCATCTC-TTAAAT-AGACAAACATCGATT
* * * * *
684345 CTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACATATTC-CTTTCATTAGGATGC
62 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAA-CAAAAACACATTCTCCTTCATTAGGATAC
* *
684409 AAGACATTGATGCTTTGGTGTCGTAAGAAAAG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * *** * * ** * *
684441 CTTTTCTTTCCACCAATTTTAACAGAGTCAAAGTTTGTCTCTTAAATACGACAAACA-AGAATAC
1 CTTTTCTTACC-CCTATTTTCTTAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCG-ATTC
* * * * * ** * *
684505 TGATAATAATC-CC-TTTTTTTTCAAGATTAGGTACAATAAACGTAGTCTTCTT-ATTAGGATAC
63 TCATAATAGTCTCCATTCTTTTT-AAGATTGGGAACAA-AAACACATTCTCCTTCATTAGGATAC
** * * *
684567 ACAACATTGATGCTTTGGTTTCGCAAGGAAGG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * *
684599 C-TTTCTTCCCCCTAATTTT-TATAAAGTCTAAGTTCGTGC-CTCAAATGAGACAAACATGGATT
1 CTTTTCTTACCCCT-ATTTTCT-TAAAATCAAAGTTCAT-CTCTTAAAT-AGACAAACATCGATT
** * **** * * *
684661 CT-AGTAA-AGATCTTTATTCATTCGGTGATTTGGCACTATAAACACATTCTCC-TCATTAGGAT
62 CTCA-TAATAG-TCTCCATTCTTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCATTAGGAT
* * ** * * * *
684723 GA-ATGATATTGATGATTTTCTTTTGCATGAAAAT
124 -ACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * *
684757 CTTTTCTGAGCCCTATTTTCCTTAAAATCAAAGTTAATCTTTTAAATATGGCAAGCATCGATTCT
1 CTTTTCTTACCCCTATTTT-CTTAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCGATTCT
*
684822 CATAATAGTCTCCATTCTTTTTAACATTGGGAAGCAAAAACACATTC-CCTTCATTAGGATACAT
64 CATAATAGTCTCCATTCTTTTTAAGATTGGGAA-CAAAAACACATTCTCCTTCATTAGGATACAT
684886 GACATTGATGCTTTGGTGTCGCAAGAAAAG
128 GACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * **
684916 CTTTTCTTTCCACC-ATTTT-TGATAGAATTACAA-TTTGTCTCTTAAATACGACAAACAT-GAA
1 CTTTTCTTACC-CCTATTTTCT--TAAAATCA-AAGTTCATCTCTTAAATA-GACAAACATCG-A
** * * * * * * * * * * ** * *
684977 AACTTATACTAATCCCCGTTCCTTTTAGGATTAGGTAGCATAAACTTAGTCTTCTT-ATTAGGAT
60 TTCTCATAATAGTCTCCATTCTTTTTAAGATT-GGGAACAAAAACACATTCTCCTTCATTAGGAT
* * * *
685041 ACATCATATTGATGCTTTGGTTTCGCAAGAAAGG
124 ACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * * * *
685075 CTTTTTTTCACACCAATTTT-TGTAAAGTCTAAGTTCGTGC-CTCT-AATGAGATAAACATGGAT
1 CTTTTCTT-ACCCCTATTTTCT-TAAAATCAAAGTTCAT-CTCT-TAAAT-AGACAAACATCGAT
** * ** * * * *
685137 TCT-AGTAA-AGATCAT-TTTTCATTTTGTGAATAGGTACTATAAACA-ATTCTCC-TC-TTCAG
61 TCTCA-TAATAG-TC-TCCATTCTTTTTAAGATTGGGAAC-AAAAACACATTCTCCTTCATT-AG
* * * ** * * * * *
685196 GATAAATGATATTGATGATTTTATTTTGCGAGGAAAT
121 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* ** * * * * *
685233 ATTTTCTTTA-CGTTATTTTCCTTCAAATCAAAGTTCATC-CTTCAAACAAACCAAGCTTCGATT
1 CTTTTC-TTACCCCTATTTT-CTTAAAATCAAAGTTCATCTCTT-AAATAGA-CAAACATCGATT
* * * * * * *
685296 CTCATAATAGCCCCCATTCCTTTTAAGATTGGGAAACGAACACACATTC-ACTTTATTAGGATAC
62 CTCATAATAGTCTCCATTCTTTTTAAGATTGGG-AACAAAAACACATTCTCCTTCATTAGGATAC
* **
685360 ATGAAATTGATGCTTTGGTGTCATAAGAAAAG
126 ATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* ** ** *
685392 CTTTTCTTTCCACCGT-TTTTGATAAAATCAAAGTTTGTCTCTTAAATATGACAAACAT-GAATA
1 CTTTTCTTACC-CC-TATTTTCTTAAAATCAAAGTTCATCTCTTAAATA-GACAAACATCG-ATT
* * * * * * ** *
685455 CTCA-AACTAATC-CTCATTCTTTTCAAGATTAGGCACCATAACGTAGTCTCC-TCATTAGGATA
62 CTCATAA-TAGTCTC-CATTCTTTTTAAGATTGGGAACAAAAACACATTCTCCTTCATTAGGATA
* * * * *
685517 CATCATATTGACGCTTTGGTTTCGCAGGAAA
125 CATGACATTGATGCTTTGGTGTCGCAAGAAA
685548 GGGTTTTTCC
Statistics
Matches: 3087, Mismatches: 1051, Indels: 583
0.65 0.22 0.12
Matches are distributed among these distances:
150 31 0.01
151 74 0.02
152 46 0.01
153 69 0.02
154 2 0.00
155 10 0.00
156 47 0.02
157 240 0.08
158 914 0.30
159 1307 0.42
160 191 0.06
161 34 0.01
162 2 0.00
163 2 0.00
164 6 0.00
165 103 0.03
166 9 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (157 bp):
CTTTTCTTACCCCTATTTTCTTAAAATCAAAGTTCATCTCTTAAATAGACAAACATCGATTCTCA
TAATAGTCTCCATTCTTTTTAAGATTGGGAACAAAAACACATTCTCCTTCATTAGGATACATGAC
ATTGATGCTTTGGTGTCGCAAGAAAAG
Found at i:686397 original size:158 final size:157
Alignment explanation
Indices: 686235--686886 Score: 349
Period size: 159 Copynumber: 4.1 Consensus size: 157
686225 CGTAAGAGAA
* *
686235 GCTTTTCTTTTCACC-ATTTTCAATAAAATTAAAGTTTGTCTCTCAAATACAACAAACAT-GAAT
1 GCTTTTCTTTCCACCAATTTTC-ATAAAATTAAAGTTCGTC-CTCAAATA-AACAAACATCGAAT
**
686298 ACTCATACTAATCCCCATTTTTTCAGGATTAGGCACCACAAATGTAGTCTTCTCATTAGGATACA
63 ACTCATACTAATCCCCATTTTTTCAGGATTAGGCACCACAAACATAGTCTTCTCATTAGGATACA
*
686363 TCATAATGATGCTTTTGTTTTGCGAGAAAG
128 ACATAATGATGCTTTTGTTTTGCGAGAAAG
* ** * * * *
686393 GC-TTT-TTCCCACCAATTTTTGTAAAGTCT-AAGTTCGTGCCTCAAATGAGACAAACATGGATT
1 GCTTTTCTTTCCACCAATTTTCATAAAAT-TAAAGTTCGT-CCTCAAAT-AAACAAACATCGAAT
* **** * * * * *
686455 A-T-AGTA-AAGATCTTTGTTCATTTT-ATGATTAGGTACTACAAACACAATCTTCTCATTAGGA
63 ACTCA-TACTA-ATCCCCATT--TTTTCAGGATTAGGCACCACAAACATAGTCTTCTCATTAGGA
* * *
686516 T-CAACGATATTGATGATTTTATTTTGC-ATGGAAA-
124 TACAAC-ATAATGATGCTTTTGTTTTGCGA--GAAAG
* * * * * * * * *
686550 TCTTTTCTTTACC-CTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCG-AT
1 GCTTTTCTTT-CCACCAATTTTCATAAAATTAAAGTTCGTCC-TCAAATAA-ACAAACATCGAAT
* * * * * * * *
686613 TCTCATAAC-AGTCTCCATTTTTTTCAAGATT-GAGAAGCAAAAACATATTCCTT-TCATTAGGA
63 ACTCAT-ACTAATCCCCA-TTTTTTCAGGATTAG-GCACCACAAACATAGT-CTTCTCATTAGGA
* * * * * * * ** *
686675 TGCAAGACATTGATGCTTTGGTGTCGTAAGAAAA
124 TACAACATAATGATGCTTTTGTTTTGCGAGAAAG
* *
686709 GCTTTTCTTTCCACC-GTTTTCGAT-AAATTCAAAGTTTGTCTCTCAAATACAACAAACAT-GAA
1 GCTTTTCTTTCCACCAATTTTC-ATAAAATT-AAAGTTCGTC-CTCAAATA-AACAAACATCGAA
* * * *** *
686771 TACTCACACTAATCCTCGTTTTTTCAGGATTAGGCACCACAAGTGTAGTCTTCTCATTAGGATAT
62 TACTCATACTAATCCCCATTTTTTCAGGATTAGGCACCACAAACATAGTCTTCTCATTAGGATAC
* *
686836 ATCATAATGATGCTTTTGTTTCAG-GAGAAAG
127 AACATAATGATGCTTTTGTTT-TGCGAGAAAG
*
686867 GCTTTT-TTCCCACCAATTTT
1 GCTTTTCTTTCCACCAATTTT
686887 TGTAAAGTCT
Statistics
Matches: 358, Mismatches: 96, Indels: 80
0.67 0.18 0.15
Matches are distributed among these distances:
155 2 0.01
156 45 0.13
157 75 0.21
158 101 0.28
159 119 0.33
160 16 0.04
ACGTcount: A:0.31, C:0.19, G:0.13, T:0.37
Consensus pattern (157 bp):
GCTTTTCTTTCCACCAATTTTCATAAAATTAAAGTTCGTCCTCAAATAAACAAACATCGAATACT
CATACTAATCCCCATTTTTTCAGGATTAGGCACCACAAACATAGTCTTCTCATTAGGATACAACA
TAATGATGCTTTTGTTTTGCGAGAAAG
Found at i:686808 original size:474 final size:475
Alignment explanation
Indices: 685816--687519 Score: 2476
Period size: 475 Copynumber: 3.6 Consensus size: 475
685806 GATAGAATAG
* * ** *
685816 ATGAATACTC-CTACTAATCC-CTGTTATTTTCAAGATTAGACACCGTAAACATAGTCTTCTCAT
1 ATGAATACTCAC-ACTAATCCTC-GTT-TTTTCAGGATTAGGCACCACAAACGTAGTCTTCTCAT
* * * *
685879 TTGAATAGATCATAATGATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAA
63 TAGGATACATCATAATGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * *
685944 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCATCGTTCATTTTGTGA
128 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTATGA
* * * *
686009 TTAGGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAA
193 TTAGGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATGGA
* * * *
686074 AATCTTTTCCTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTTAAATAAAGCAAGCATCGAT
258 AATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * *
686139 TCTCACAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGC
323 TCTCATAACAGTCTCCATTTTTTTCAAGATTGAGAAGCAAAAACATATTCCTTTCATTAGGATGC
* * * * * *
686204 ATGATATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTTCACCATTTTCAATAAAATT-AAA
388 AAGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTCGAT-AAATTCAAA
686268 GTTTGTCTCTCAAATACAACAAAC
452 GTTTGTCTCTCAAATACAACAAAC
* * * *
686292 ATGAATACTCATACTAATCCCCATTTTTTCAGGATTAGGCACCACAAATGTAGTCTTCTCATTAG
1 ATGAATACTCACACTAATCCTCGTTTTTTCAGGATTAGGCACCACAAACGTAGTCTTCTCATTAG
* *
686357 GATACATCATAATGATGCTTTTGTTTTGCGAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTC
66 GATACATCATAATGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
*
686421 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTATAGTAAAGATCTTTGTTCATTTTATGATTA
131 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTATGATTA
* *
686486 GGTACTACAAACACAATCTTCTCATTAGGATCAACGATATTGATGATTTTATTTTGCATGGAAAT
196 GGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATGGAAAT
686551 CTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCT
261 CTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCT
686616 CATAACAGTCTCCATTTTTTTCAAGATTGAGAAGCAAAAACATATTCCTTTCATTAGGATGCAAG
326 CATAACAGTCTCCATTTTTTTCAAGATTGAGAAGCAAAAACATATTCCTTTCATTAGGATGCAAG
686681 ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAATTCAAAGTTT
391 ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAATTCAAAGTTT
686746 GTCTCTCAAATACAACAAAC
456 GTCTCTCAAATACAACAAAC
**
686766 ATGAATACTCACACTAATCCTCGTTTTTTCAGGATTAGGCACCACAAGTGTAGTCTTCTCATTAG
1 ATGAATACTCACACTAATCCTCGTTTTTTCAGGATTAGGCACCACAAACGTAGTCTTCTCATTAG
* *
686831 GATATATCATAATGATGCTTTTG-TTT-CAGGAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
66 GATACATCATAATGATGCTTTGGTTTTGCA--AGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
*
686894 TCTAACTTCGTGCC-CTAAATGAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTATGA
129 TCTAAGTTCGTGCCTC-AAATGAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTATGA
* *
686958 TTAGGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATGTTGCATTGA
193 TTAGGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATGGA
687023 AATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
258 AATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
*
687088 TCTCATAACAGTCTCCATTTTTTTCAAGATTGAGAAGCAAAAATATATTCCTTTCATTAGGATGC
323 TCTCATAACAGTCTCCATTTTTTTCAAGATTGAGAAGCAAAAACATATTCCTTTCATTAGGATGC
* * * *
687153 AAGACATTGATGCTTTGGCGTCGTAAGAAAAGATTTTCTTTCCACCGTTTTTGACAGAA-TCAAA
388 AAGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTCGATA-AATTCAAA
* * *
687217 GTTTATCTCTTAAATACGACAAAC
452 GTTTGTCTCTCAAATACAACAAAC
* * * * ** * *
687241 AAGAATACTGATAATAATCCCTTTTTTTTTCAGGATTAGGTACCATAAACGTAGTCTTC-CTATT
1 ATGAATACTCACACTAAT-CCTCGTTTTTTCAGGATTAGGCACCACAAACGTAGTCTTCTC-ATT
* * ** * * *
687305 AGGATACA-CGACATTGATGCTTTGGTTTCACAAGGAAGGCTTTTTTCCCCCCAATTTTTATAAA
64 AGGATACATC-ATAATGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
** * **
687369 GTCTAAGTTCACGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTGGTGA
128 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTATGA
* ** * * * * *
687434 TTTGGCGCTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT-TTTTGTATGGA
193 TTAGGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATGGA
* *
687498 AGTCTTTTCTTTGCCCTATTTT
258 AATCTTTTCTTTACCCTATTTT
687520 GTATGGATAA
Statistics
Matches: 1121, Mismatches: 93, Indels: 29
0.90 0.07 0.02
Matches are distributed among these distances:
472 1 0.00
473 8 0.01
474 433 0.39
475 463 0.41
476 210 0.19
477 4 0.00
478 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (475 bp):
ATGAATACTCACACTAATCCTCGTTTTTTCAGGATTAGGCACCACAAACGTAGTCTTCTCATTAG
GATACATCATAATGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTATGATTA
GGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATGGAAAT
CTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCT
CATAACAGTCTCCATTTTTTTCAAGATTGAGAAGCAAAAACATATTCCTTTCATTAGGATGCAAG
ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAATTCAAAGTTT
GTCTCTCAAATACAACAAAC
Found at i:687695 original size:218 final size:220
Alignment explanation
Indices: 687317--687727 Score: 682
Period size: 218 Copynumber: 1.9 Consensus size: 220
687307 GATACACGAC
* * * *
687317 ATTGATGCTTTGGTTTCACAAGGAAGGCTTTTTTCCCCCCAATTTTTATAAAGTCTAAGTTCACG
1 ATTGATGCTTTAGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAATTCACG
* *
687382 CCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTGGTGATTTGGCGCTATAA
66 CCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTAGTGATTTGGCACTATAA
** *
687447 ACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT-TTTT-GTATGGAAGTCTTTTCTTT
131 ACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAAATCTTTTCTTT
687510 GCCCTATTTTGTATGGATAAATGAT
196 GCCCTATTTTGTATGGATAAATGAT
* *
687535 ATTGATGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAATTCGCG
1 ATTGATGCTTTAGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAATTCACG
*
687600 CCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGATTTGGCACTATAA
66 CCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTAGTGATTTGGCACTATAA
* *
687665 ATACGTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAAATCTTTTCT
131 ACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAAATCTTTTCT
687728 CAGCCATATT
Statistics
Matches: 177, Mismatches: 14, Indels: 2
0.92 0.07 0.01
Matches are distributed among these distances:
218 159 0.90
219 4 0.02
220 14 0.08
ACGTcount: A:0.28, C:0.16, G:0.16, T:0.39
Consensus pattern (220 bp):
ATTGATGCTTTAGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTCTAAATTCACG
CCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTAGTGATTTGGCACTATAA
ACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAAATCTTTTCTTT
GCCCTATTTTGTATGGATAAATGAT
Found at i:688631 original size:476 final size:474
Alignment explanation
Indices: 687524--688719 Score: 1461
Period size: 476 Copynumber: 2.5 Consensus size: 474
687514 TATTTTGTAT
* * * * * *
687524 GGATAAATGATATTGATGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
1 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTT-TTTCCACCAATTTTTGTAAAGT
* * *
687589 CTAAATTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGATT
65 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTC-TTTTGTGATT
* * * *
687654 TGGCACTATAAATACGTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAA
129 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC-ATGGAA
* * * * * * *** *
687719 ATCTTTTC-TCAGCCATATTCTCCTTAAAACCAAAGTTCATCTTTTAAATATGGCAATCATCGAT
193 ATCTTTTCTTTA--CTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCATCGAT
* * * ** *
687783 TCTCATAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAAACACATTGCCTTCATTAGGATAC
256 TCTCATAATAGCCCCCATTCCATTTAAGATTGGGAAGCAAAAACACATTACCTTCATTAGGATAC
* * *
687848 ATGACATTGATACTTCGGTGTCGTAAGAAAAGCTTTTCTTTTCCACTATTTTTGATAGAATCAAA
321 ATGAAATTGATACTTCGGTGTCGTAAGAAAAGCTTTTCTTTTCCACCATTTTTGATAAAATCAAA
* * * *
687913 GTTTGTCTCTTAAATACGACAAACGAGAATACTCATAATAATCCCCAATCTTTTTAGGATTAGAC
386 GTTTATCTCTTAAAAACGACAAACGAGAATACACATAATAATCCCCAATCCTTTTAGGATTAGAC
** ** * *
687978 TGCGTAAACATAGTCTTCTTATTA
451 ACCACAAACACAGTCTTCTCATTA
* *
688002 GGATACATCATATTGATGTTTTGGTTTCGCAAGAAAGGCTTTTTTTCACACCAATTTTTGAAAAG
1 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTTC-CACCAATTTTTGTAAAG
* * *** * *
688067 TCTAAGTTCGTGCCTCTAATGAGATACGTATGGATTCTAGTAAAT-ATCTTTTTTCATTTTTTGA
64 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTC-TTTTGTGA
* * * * *
688131 ATAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATGATATTCATAATTTTATTTTGCATGG
127 TTAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTCTTTTGCATGG
* *
688194 AAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCGTCCTTTAAACAAACCAAGCTTCGA
191 AAATCTTTTCTTTAC-TTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCATCGA
* * * * *
688259 TTCTCATAATAGCCCCCATTCCATTTAAGATTGGTAATCGAACACACATTCACCTT-TTTAGGAT
255 TTCTCATAATAGCCCCCATTCCATTTAAGATTGGGAAGCAAAAACACATT-ACCTTCATTAGGAT
* * *
688323 ACATGAAATTGATGCTTCGGTGTCGTAAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAAAATCG
319 ACATGAAATTGATACTTCGGTGTCGTAAGAAAAGCTTTTCTTTTCCACCATTTTTGATAAAATCA
* * *
688387 AAGTTTATCTCTTAAAAACGACAAAC-ATGAATACACATACTAATCCTCATTCCTTTTAGGATTA
384 AAGTTTATCTCTTAAAAACGACAAACGA-GAATACACATAATAATCCCCAATCCTTTTAGGATTA
* *
688451 GGCACCACAAACGCAGTCTTCTCATTA
448 GACACCACAAACACAGTCTTCTCATTA
* *
688478 GGATACATCATATTGACGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGT
1 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC-ACCAATTTTTGTAAAGT
* * * *
688543 CTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAATGATATTCATTCTTTTGGTCATT
65 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCTTTT-GTGATT
* * *
688608 AGACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
129 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAA
* *
688673 TCTTTTCTTTGCTCTATTTTCCTTACAATCAAAGTTCATCCTTTAAA
194 TCTTTTCTTTACT-TATTTTCCTTAAAATCAAAGTTCATCCTTTAAA
688720 TAAGGCAAGC
Statistics
Matches: 607, Mismatches: 97, Indels: 30
0.83 0.13 0.04
Matches are distributed among these distances:
474 8 0.01
475 81 0.13
476 216 0.36
477 141 0.23
478 79 0.13
479 79 0.13
480 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (474 bp):
GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCACCAATTTTTGTAAAGTC
TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCTTTTGTGATTAG
GCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATC
TTTTCTTTACTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCATCGATTCTCA
TAATAGCCCCCATTCCATTTAAGATTGGGAAGCAAAAACACATTACCTTCATTAGGATACATGAA
ATTGATACTTCGGTGTCGTAAGAAAAGCTTTTCTTTTCCACCATTTTTGATAAAATCAAAGTTTA
TCTCTTAAAAACGACAAACGAGAATACACATAATAATCCCCAATCCTTTTAGGATTAGACACCAC
AAACACAGTCTTCTCATTA
Found at i:689101 original size:395 final size:396
Alignment explanation
Indices: 688349--689124 Score: 1078
Period size: 395 Copynumber: 2.0 Consensus size: 396
688339 TCGGTGTCGT
*
688349 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCGAAGTTTATCTCTTAAAAACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACA
* * * *
688414 TGAATACACATACTAATCCTCATTCCTTTTAGGATTAGGCACCACAAACGCAGTCTTCTCATTAG
66 TGAATACACAAACTAATCCTCATTCCTTTTAAGATTAGACACCACAAACACAGTCTTCTCATTAG
* * ** * * *
688479 GATACATCATATTGACGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTC
131 AATACATAATAACGACGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTC
*
688544 TAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAATGATATTCATTCTTTTGGTCATTA
196 TAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAAAGATATTCATTCTTTTGGTCATTA
* *
688609 GACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAAT
261 GACACTATAAACACATTCTCCTCAATAGGATAAATGATATTCATGATTTTATTTTGCATGAAAAT
* * * *
688674 CTTTTCTTTGCTCTATTTTCCTTACAATCAAAGTTCATCCTTTAAATAAGGCAAGCCACGTTTGG
326 CTTTTCTTTCCTCTATTTTCCTTAAAATCAAAGTTAATCCTTAAAATAAGGCAAGCCACGTTTGG
688739 GGTTGC
391 GGTTGC
* * * * * *
688745 AAGAAAAGCTTTT-TTTGCACTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACA
* * * *
688809 TGAATACTCAAACTAATCC-C-TGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCAAT
66 TGAATACACAAACTAATCCTCAT-TCCTTTT-AAGATTAGACACCACAAACACAGTCTTCTC-AT
* * *
688872 T-GAATAGATAATAACGATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAA
128 TAGAATACATAATAACGACGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAA
* * * * * *
688936 GTCTCAGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTT-GTG
193 GTCTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAAAGATATTCATTC-TTTTGGTC
** * *
689000 ATTAGGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTCATGATTTTATTTTGCATGA
257 ATTAGACACTATAAACACATTCTCCTCAATAGGATAAATGATATTCATGATTTTATTTTGCATGA
*
689065 AAATCTTTTCTTTACCT-TATTTTTCTTAAAATCAAAGTTAATCCTTAAAATAAGGCAAGC
322 AAATCTTTTCTTT-CCTCTATTTTCCTTAAAATCAAAGTTAATCCTTAAAATAAGGCAAGC
689125 ATCGATTCTC
Statistics
Matches: 332, Mismatches: 43, Indels: 11
0.86 0.11 0.03
Matches are distributed among these distances:
393 1 0.00
394 7 0.02
395 302 0.91
396 22 0.07
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (396 bp):
AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACA
TGAATACACAAACTAATCCTCATTCCTTTTAAGATTAGACACCACAAACACAGTCTTCTCATTAG
AATACATAATAACGACGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTC
TAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAAAGATATTCATTCTTTTGGTCATTA
GACACTATAAACACATTCTCCTCAATAGGATAAATGATATTCATGATTTTATTTTGCATGAAAAT
CTTTTCTTTCCTCTATTTTCCTTAAAATCAAAGTTAATCCTTAAAATAAGGCAAGCCACGTTTGG
GGTTGC
Found at i:689659 original size:475 final size:475
Alignment explanation
Indices: 688745--692456 Score: 4636
Period size: 475 Copynumber: 7.8 Consensus size: 475
688735 TTGGGGTTGC
* ** *
688745 AAGAAAAGCTTTT-TTTGCACTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
688809 TGAATACTCA-AACTAAT-CCCTGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCAAT
66 AGAATACTCATAA-TAATCCCCT-TT-TTTTCAGGATTAGGCACCATAAACATAGTCTTCT-TAT
* * * ** * *
688872 T-GAATAGATAATAACGATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAA
127 TAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * **
688936 GTCTCAGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGA
192 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGA
* * * *
689001 TTAGGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTCATGATTTTATTTTGCATGAA
257 TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * *
689066 AATCTTTTCTTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTAAAATAAGGCAAGCATCGAT
322 AATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * * *
689131 TCTCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGAATGC
387 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
*
689196 ATGATATTGATGCTTTGGTGTCGT
452 ATGACATTGATGCTTTGGTGTCGT
* * * * *
689220 AAGAAAAGCTTTTCTTTCCATCGTTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
** * *
689285 AGAATACAGATAATAATCCCCTTTTTATCAGGATTAGGTACCATAAACATAGTCTTCTTATTAGG
66 AGAATACTCATAATAATCCCCTTTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGG
* * *
689350 ATACA-CGAT-TTGATGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCC-CACAATTTTTATAAAGT
131 ATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCAC-CAATTTTTGTAAAGT
* * * * *
689412 CTAAATTCGCGCCTCAAATGAGACAAACATGGATTCTGGTAATGATCTTTATTCATTTAGTGATT
194 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATT
* * * **
689477 TGGCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTAACAATGGAA
259 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAA
* * * *
689542 ATCTTTTC-TTAGCCTTATTCTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAATCATCGAT
323 ATCTTTTCTTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* *
689606 TCTCATAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAAACACCTTCCCTTCATTAGGATAC
387 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
689671 ATGACATTGATGCTTTGGTGTCGT
452 ATGACATTGATGCTTTGGTGTCGT
*
689695 AAGAAAAGCATTTTTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
1 AAGAAAAGC-TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * *
689760 AAGAATACTCATACTAATCCCCATTCTTTTT-AGGATTAGACAGCGTAAACATAGTCTTCTTATT
65 AAGAATACTCATAATAATCCCC-TT-TTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
* *
689824 AGGATACATCATATTGATGCTTTGGTGTCGCAAGAAAGGCTTTTTTTCACACCAATTTTTGTAAA
128 AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTTCCCACCAATTTTTGTAAA
** * * * * * * * *
689889 GTCTAAGTTCGCACCTCTAGTGAGATACATATAGATTCTAGTAAATATCTTTTTTCATCTTT-TG
192 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCAT-TTTGTG
* *
689953 AATAGGTACTATAAACA-ATTCTCCT-ATTCAGGATAAATGATATTGATGATTTTATTTTGCATG
256 ATTAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATG
* * * ** * *
690016 GAAATCTTTTCTTTACGTTATTTTCTTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCA
320 GAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCG
* * * * * *
690081 ATTCTCATAATAGCCCCCATTCTTTTTAAGATTGGGAATCGAACACACATTCCCTTTATTAGGAT
385 ATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
* * *
690146 ACACGAAATTGATGCTTTGGTGTCAT
450 ACATGACATTGATGCTTTGGTGTCGT
* * * *
690172 AAGAGAAGCTTTTCTTTCCACCATTTTTGATCA-AATCAATGTTTGTCTCTCAAATACAACAAAC
1 AAGAAAAGCTTTTCTTTCCACCATTTTTGAT-AGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * ** * **
690236 ATGAATACTCATACTAAT-CCCTGTTTTTTCAGGATTAGGCACCACAAATGTTGTCTTCTCCTTA
65 AAGAATACTCATAATAATCCCCT-TTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * *
690300 GGATACATCATAATGATGCTTTGGTTTTGCGAGAAGGGCTTTTTTCCCACCAATTTTTGTAAAGT
129 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * * *
690365 CTAAGTTCGTGCCCCAAATGTGACAAACATGGATTCTAGTAAAGAT-TTTCGTTAATTTTGTGAT
194 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTT-ATTCATTTTGTGAT
* * * *
690429 TAGGTATTATAAACACATTCTGCTCTTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
258 TAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * *
690494 ATCTTTTCTTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTTAAATAAGTCAAGCATCGATT
323 ATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * *** * * ** * *
690559 CTCATAACAGTCTCCATTCTCTTCGTGATTGAGAAGCAAAAAAACATTCTGTTCATTTGGATGCA
388 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
690624 TGATATTGATGCTTTGGTGTCGT
453 TGACATTGATGCTTTGGTGTCGT
* * * *
690647 AAGAAAAGCTTTTCTTTCCATCATTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * *
690712 AGAATACTGATAATGATCACCATTTTTTTCAAGATTAGGTACCATAAACATAGTCTTCCTATTAG
66 AGAATACTCATAATAATC-CCCTTTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
** * * * *
690777 GATACA-CGAT-TTGATGCTTTATTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
130 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * * *
690840 CTAAATTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGATT
194 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATT
* * * *
690905 TGGCACTATAAACACATTCTCCTCATTAGGATAAATGATACTGATGATTTTCTTTTACAATGGAA
259 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAA
* * * *
690970 ATCGTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCAACTTTTAAATATGGCAAGCATCGAT
323 ATCTTTTCTTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* *
691034 TCTCGTAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
387 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* *
691099 ATTACATTGATGCTTTGGTGTCAT
452 ATGACATTGATGCTTTGGTGTCGT
*
691123 AAGAAAAGCTTTTCTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAAC
1 AAGAAAAGCTTTTC-TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * **
691188 AAGAATACTGATAATAATCCCTTTTTTTTCAGGATTAGGTACCATAAATGTAGTCTTCTTATTAG
65 AAGAATACTCATAATAATCCCCTTTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * * *
691253 GATACA-CAACATTGATGCTTTGGTTTCACAAGGAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
130 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
*
691317 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTGGTGATT
194 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATT
* * * *
691382 TGGCACTATAAACACATTCTCCTCATTAGGATGAATGATATTGATGATTTTCTTTTGCATGAAAA
259 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * * ** **
691447 TCTTTTC-TGAGCCCTATTTTCCTTAAAATCAAAGTTAATCTTTTAAATATTGCAAGCATTAATT
324 TCTTTTCTTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* *
691511 CTCGTAATAGTCTCCATTCTTTTTAACATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
388 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
691576 TGACATTGATGCTTTGGTGTCGT
453 TGACATTGATGCTTTGGTGTCGT
* *
691599 AAGAAAAGCTTTTCTTTCCACCATTCTTGATAGAATCAGAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
691664 AGAATACTGATAATAATCCCCGTTCTTTTT-AGGATTAGGTAGCATAAACTTAGTCTTCTTATTA
66 AGAATACTCATAATAATCCCC-TT-TTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* *
691728 GGATACATCATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAA
129 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * *
691793 GTCTTAGTTCGTTCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCATTT-TTCATTTTGTG
192 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATC-TTTATTCATTTTGTG
* * * *
691857 AATAGGTACTATAAACA-ATTCTCCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTACGT
256 ATTAGGCACTATAAACACATTCT-CCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCAT
* * * ** *
691920 GGAAATCTTTTCTTTACATTATTTTCCTTAAAATCAAAATTCATCCTTTAAACAAACCAAGCTTC
319 GGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* * * * * * * *
691985 GATTCTCATAATAG-CCCTCATTCCTTTTAAGATTGGGAAACGAACACACATTCACTTTATTAAG
384 GATTCTCATAATAGTCTC-CATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGG
* * *
692049 ATACATGAAATTAATGCTTTGGTGTCAT
448 ATACATGACATTGATGCTTTGGTGTCGT
* * *
692077 AAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
692142 TGAATACTCA-AACTAATCCCCATTCTTTTCAGGATTAGGCACCAT-AACGTAGTCTCCTCATTA
66 AGAATACTCATAA-TAATCCCC-TTTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * *
692205 GGATACATCATATTGACGCTTTGGTTTCGTAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGT
129 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * * * * *
692270 CTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTTGTAATGATATTCATTC-TTTTGGTCAT
194 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTT-GTGAT
* * * * * *
692334 TAGACACTATAAACAGATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTAGCATGAAA
258 TAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * *
692399 ATCTTTTCTTTGCCCTATTTTCCTTACAATCAAAGTTCATCCTTTAAATAAGGCAAGC
323 ATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
692457 CACGTTTGGG
Statistics
Matches: 2795, Mismatches: 392, Indels: 100
0.85 0.12 0.03
Matches are distributed among these distances:
473 7 0.00
474 250 0.09
475 883 0.32
476 666 0.24
477 495 0.18
478 405 0.14
479 86 0.03
480 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (475 bp):
AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
AGAATACTCATAATAATCCCCTTTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGG
ATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCT
AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAG
GCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATC
TTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTC
ATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGA
CATTGATGCTTTGGTGTCGT
Found at i:690598 original size:952 final size:951
Alignment explanation
Indices: 688745--692456 Score: 4726
Period size: 952 Copynumber: 3.9 Consensus size: 951
688735 TTGGGGTTGC
* ** *
688745 AAGAAAAGCTTTT-TTTGCACTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* ** * *
688809 TGAATACTCA-AACTAATCCCTGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCAATT
66 AGAATACTCATAA-TAATCCCCATTCTTTTTAAGATTAGACACCATAAACATAGTCTTCT-TATT
* * * ** ** * *
688873 -GAATAGATAATAACGATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAG
129 AGGATACATCATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAG
* * * ** *
688937 TCTCAGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGAT
194 TCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGAA
* * * *
689002 TAGGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTCATGATTTTATTTTGCATGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTACATGGAA
* * * * **
689067 ATCTTTTCTTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTAAAATAAGGCAAGCATCGATT
324 ATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCATCGATT
* * * * * * *
689132 CTCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGAATGCA
389 CTCATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * * * *
689197 TGATATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCATCGTTTGTGA-CAGAATCAAAG
454 TGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATCAGAATCAAAG
* ** * *
689261 TTTGTCTCTTAAATACGACACACAAGAATACAGATAATAATCCCCTTTTTATCAGGATTAGGTAC
519 TTTGTCTCTTAAATACGACAAACAAGAATACTCATAATAAT-CCCTTTTTTTCAGGATTAGGCAC
* * * *
689326 CATAAACATAGTCTTCTTATTAGGATACACGAT-TTGATGCTTTAGTTTCGCAA-GAAAGGCTTT
583 CATAAACGTAGTCTTCTCATTAGGATACAC-ATAATGATGCTTTGGTTTCGCAAGGAAAGGCTTT
* * *
689389 CTTCCC-CACAATTTTTATAAAGTCTAAATTCGCGCCTCAAATGAGACAAACATGGATTCTGGTA
647 CTTCCCAC-CAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
* * * *
689453 ATGATCTTTATTCATTTAGTGATTTGGCACTATAAACACATTCTCCTCATTAGGGTAAATGATAT
711 AAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATAT
* * * * *
689518 TGATGATTTTCTTTAACAATGGAAATCTTTTCTTAGCCTTATTCTCCTTAAAATCAAAGTTCATC
776 TGATGATTTTCTTTAGC-ATGAAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTAATC
* * * *
689583 TTTTAAATATGGCAATCATCGATTCTCATAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAA
840 CTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAA
*
689648 ACACCTTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGT
905 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGT
*
689695 AAGAAAAGCATTTTTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
1 AAGAAAAGC-TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * *
689760 AAGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGACAGCGTAAACATAGTCTTCTTATTA
65 AAGAATACTCATAATAATCCCCATTCTTTTTAAGATTAGACACCATAAACATAGTCTTCTTATTA
* *
689825 GGATACATCATATTGATGCTTTGGTGTCGCAAGAAAGGCTTTTTTTCACACCAATTTTTGTAAAG
130 GGATACATCATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTTTTCACACCAATTTTTGTAAAG
* * * * * * * *
689890 TCTAAGTTCGCACCTCTAGTGAGATACATATAGATTCTAGTAAATATCTTTTTTCATCTTT-TGA
194 TCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCAT-TTTGTGA
*
689954 ATAGGTACTATAAACA-ATTCTCCT-ATTCAGGATAAATGATATTGATGATTTTATTTTGCATGG
258 ATAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTACATGG
* * * *
690017 AAATCTTTTCTTTACGTTATTTTCTTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCAA
322 AAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCATCGA
* * * *
690082 TTCTCATAATAGCCCCCATTCTTTTTAAGATTGGGAATCGAACACACATTCCCTTTATTAGGATA
387 TTCTCATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATA
* *
690147 CACGAAATTGATGCTTTGGTGTCATAAGAGAAGCTTTTCTTTCCACCATTTTTGATCA-AATCAA
452 CATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATCAGAATCAA
* * * * *
690211 TGTTTGTCTCTCAAATACAACAAACATGAATACTCATACTAATCCCTGTTTTTTCAGGATTAGGC
517 AGTTTGTCTCTTAAATACGACAAACAAGAATACTCATAATAATCCCT-TTTTTTCAGGATTAGGC
* * * * * * *
690276 ACCACAAATGTTGTCTTCTCCTTAGGATACATCATAATGATGCTTTGGTTTTGCGA-GAAGGGCT
581 ACCATAAACGTAGTCTTCTCATTAGGATACA-CATAATGATGCTTTGGTTTCGCAAGGAAAGGCT
* * * *
690340 TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCCCAAATGTGACAAACATGGATTCTAGT
645 TTCTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * *
690405 AAAGAT-TTTCGTTAATTTTGTGATTAGGTATTATAAACACATTCTGCTCTTTAGGATAAATGAT
710 AAAGATCTTT-ATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
* * * * *
690469 ATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTA-CCTTATTTTTCTTAAAATCAAAGTTAA
774 ATTGATGATTTTCTTTAGCATGAAAATCTTTTC-TTAGCCCTATTTTCCTTAAAATCAAAGTTAA
* * * *** *
690533 TCCTTTAAATAAGTCAAGCATCGATTCTCATAACAGTCTCCATTCTCTTCGTGATTGAGAAGCAA
838 TCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAA
* ** * * *
690598 AAAAACATTCTGTTCATTTGGATGCATGATATTGATGCTTTGGTGTCGT
903 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGT
* * * *
690647 AAGAAAAGCTTTTCTTTCCATCATTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * ** *
690712 AGAATACTGATAATGATCACCATT-TTTTTCAAGATTAGGTACCATAAACATAGTCTTCCTATTA
66 AGAATACTCATAATAATCCCCATTCTTTTT-AAGATTAGACACCATAAACATAGTCTTCTTATTA
** * * * *
690776 GGATACA-CGAT-TTGATGCTTTATTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAG
130 GGATACATC-ATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAG
* * * * *
690839 TCTAAATTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGAT
194 TCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGAA
* * * *
690904 TTGGCACTATAAACACATTCTCCTCATTAGGATAAATGATACTGATGATTTTCTTTTACAATGGA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTAC-ATGGA
* * * * ***
690969 AATCGTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCAACTTTTAAATATGGCAAGCATCGA
323 AATCTTTTCTTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCATCGA
* * * *
691033 TTCTCGTAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATA
387 TTCTCATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATA
* *
691098 CATTACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTTCCACCATTTTTGAT-AGAATCA
452 CATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTC-TTTCCACCATTTTTGATCAGAATCA
* *
691162 AAGTTTGTCTCTTAAATATGACAAACAAGAATACTGATAATAATCCCTTTTTTTTCAGGATTAGG
516 AAGTTTGTCTCTTAAATACGACAAACAAGAATACTCATAATAATCCC-TTTTTTTCAGGATTAGG
* * * *
691227 TACCATAAATGTAGTCTTCTTATTAGGATACACA-ACATTGATGCTTTGGTTTCACAAGG-AAGG
580 CACCATAAACGTAGTCTTCTCATTAGGATACACATA-A-TGATGCTTTGGTTTCGCAAGGAAAGG
*
691290 CTTTCTTCCCCCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
643 CTTTCTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* * *
691355 GTAAAGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGAATGA
708 GTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGA
* *
691420 TATTGATGATTTTCTTTTGCATGAAAATCTTTTCTGAGCCCTATTTTCCTTAAAATCAAAGTTAA
773 TATTGATGATTTTCTTTAGCATGAAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTAA
* ** ** * *
691485 TCTTTTAAATATTGCAAGCATTAATTCTCGTAATAGTCTCCATTCTTTTTAACATTGGGAAGCAA
838 TCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAA
691550 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGT
903 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGT
* *
691599 AAGAAAAGCTTTTCTTTCCACCATTCTTGATAGAATCAGAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * ** * *
691664 AGAATACTGATAATAATCCCCGTTCTTTTTAGGATTAGGTAGCATAAACTTAGTCTTCTTATTAG
66 AGAATACTCATAATAATCCCCATTCTTTTTAAGATTAGACACCATAAACATAGTCTTCTTATTAG
691729 GATACATCATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAAG
131 GATACATCATATTGATGCTTTGGTTTCACAAGAAAGGC--TTTTTTCACACCAATTTTTGTAAAG
* ** * * *
691794 TCTTAGTTCGTTCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCATTTTTCATTTTGTGAA
194 TCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGAA
*
691859 TAGGTACTATAAACA-ATTCTCCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTACGTGG
259 TAGGTACTATAAACACATTCT-CCTCATT-AGGATAAATGATATTGATGATTTTATTTTACATGG
* * *
691922 AAATCTTTTCTTTACATTATTTTCCTTAAAATCAAAATTCATCCTTTAAACAAACCAAGCTTCGA
322 AAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCATCGA
* * * * * * * *
691987 TTCTCATAATAGCCCTCATTCCTTTTAAGATTGGGAAACGAACACACATTCACTTTATTAAGATA
387 TTCTCATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATA
* * * *
692052 CATGAAATTAATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTCGAT-AAAATCAA
452 CATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATCAGAATCAA
* *
692116 AGTTTGTCTCTTAAATACGACAAACATGAATACTCA-AACTAATCCCCATTCTTTTCAGGATTAG
517 AGTTTGTCTCTTAAATACGACAAACAAGAATACTCATAA-TAAT-CCC-TTTTTTTCAGGATTAG
* * * *
692180 GCACCAT-AACGTAGTCTCCTCATTAGGATACATCATATTGACGCTTTGGTTTCG-TAGGAAAGG
579 GCACCATAAACGTAGTCTTCTCATTAGGATACA-CATAATGATGCTTTGGTTTCGCAAGGAAAGG
* * * * *
692243 CTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTT
643 CTTTCTTCCCACCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* * * * * * *
692308 GTAATGATATTCATTC-TTTTGGTCATTAGACACTATAAACAGATTCTCCTCAATAGGATAAATG
708 GTAAAGATCTTTATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * *
692372 ATATTGATGATTTTCTTTAGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTACAATCAAAGTTC
772 ATATTGATGATTTTCTTTAGCATGAAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTA
692437 ATCCTTTAAATAAGGCAAGC
837 ATCCTTTAAATAAGGCAAGC
692457 CACGTTTGGG
Statistics
Matches: 2371, Mismatches: 348, Indels: 83
0.85 0.12 0.03
Matches are distributed among these distances:
948 2 0.00
949 83 0.04
950 78 0.03
951 277 0.12
952 1068 0.45
953 558 0.24
954 180 0.08
955 125 0.05
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (951 bp):
AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
AGAATACTCATAATAATCCCCATTCTTTTTAAGATTAGACACCATAAACATAGTCTTCTTATTAG
GATACATCATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTC
TAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGAATA
GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTACATGGAAAT
CTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCATCGATTCT
CATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATG
AAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATCAGAATCAAAGTT
TGTCTCTTAAATACGACAAACAAGAATACTCATAATAATCCCTTTTTTTCAGGATTAGGCACCAT
AAACGTAGTCTTCTCATTAGGATACACATAATGATGCTTTGGTTTCGCAAGGAAAGGCTTTCTTC
CCACCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT
CTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATG
ATTTTCTTTAGCATGAAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTAATCCTTTAA
ATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACAT
TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGT
Found at i:691272 original size:159 final size:159
Alignment explanation
Indices: 689171--691788 Score: 544
Period size: 159 Copynumber: 16.5 Consensus size: 159
689161 TGAGAAGCAA
* * * * * *
689171 AAACACATTC-CCTTCATTAGAATGCATGATATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTC-
1 AAACACAGTCTCCTT-ATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCT
* * * * * * *
689234 TTTCCATCGTTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACAAGAATACAGATAAT
65 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATACTGATAAT
* *
689299 AATCCCCTT-TTTATCAGGATTAGGTACCAT
130 AATCCCATTCTTT-TTAGGATTAGGTACCAT
* * * * * ** *
689329 AAACATAGTCTTCTTATTAGGATACACGA-TTTGATGCTTTAGTTTCGCAAGAAAGGC-TTTCTT
1 AAACACAGTCTCCTTATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCTT
** * * * * * * * *
689392 CCCCACAATTTTT-ATA-AAGTCTAAA-TTCG-CGCCTCAAATGA-GACAAACATGGATTCTGGT
66 TTCCACCATTTTTGATAGAA-TC-AAAGTTTGTC-TCTTAAAT-ATGACAAACAAGAATACTGAT
* ** * * * *
689452 AATGATCTTTATTC-ATTTAGTGATTTGGCACTAT
127 AATAATC-CCATTCTTTTTAG-GATTAGGTACCAT
* * * * * * ** * * * *
689486 AAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTAACAATGGAAATCTTTTCT
1 AAACACAGTCTCCTTATTAGGATACATGACATTGATGCTTTGGTTTCATAA-GAAAAGCTTTTCT
** ** * *** * ** * * * * * *
689551 TAGCC-TTATTCTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAATCATCG-ATTCTCATAA
65 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA-AGAATACTGATAA
* * * * * * *
689614 TAGTCTCTATTCTTTTTAAGATTGGGAAGCAA
129 TAATC-CCATTCTTTTTAGGATTAGGTACCAT
** * *
689646 AAACACCTTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCATTTT-
1 AAACACAGTCTCCTT-ATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGC-TTTTC
* * *
689709 TTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACTCATAC
64 TTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATACTGATAA
** * *
689774 TAATCCCCATTCTTTTTAGGATTAGACAGCGT
129 TAAT-CCCATTCTTTTTAGGATTAGGTACCAT
* * * * * ** *
689806 AAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTGTCGCAAGAAAGGC-TTT-TT
1 AAACACAGTCTCCTTATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCTT
* * * * * * * * *
689869 TTCACACCAATTTTTG-TA-AAGTCTAAGTTCG-CACCT--CTAGTGAGATACATATAGATTCT-
66 TTC-CACC-ATTTTTGATAGAA-TCAAAGTTTGTCTCTTAAATA-TGACAAACA-AGA-ATACTG
*** * *
689928 AGTAA-ATATCTTTTTTCATCTTTT--GAATAGGTACTAT
125 A-TAATA-ATC-CCATTC-T-TTTTAGGATTAGGTACCAT
* * * * ** * *
689965 AAACA-ATTCTCC-TATTCAGGATAAATGATATTGATGATTTTATTTTGCAT--GGAAATCTTTT
1 AAACACAGTCTCCTTATT-AGGATACATGACATTGATG-CTTTGGTTT-CATAAGAAAAGCTTTT
* *** * * ** * * * *** * *
690026 C-TTTACGTTATTTTCT-TTAAAATCAAAGTTCATC-CTTTAAACA-AACCAAGCTTCAATTCTC
63 CTTTTCCACCATTTT-TGATAGAATCAAAGTTTGTCTC-TTAAATATGA-CAAACAAGAATACTG
** * * * *
690087 ATAATAGCCCCCATTCTTTTTAAGATTGGGAATCGA-
125 ATAATA-ATCCCATTCTTTTTAGGATTAGGTA-CCAT
* * * * * *
690123 ACACACATTC-CCTTTATTAGGATACACGAAATTGATGCTTTGGTGTCATAAGAGAAGCTTTTC-
1 AAACACAGTCTCC-TTATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCT
* * ** * * *
690186 TTTCCACCATTTTTGATCA-AATCAATGTTTGTCTCTCAAATACAACAAACATGAATACTCATAC
65 TTTCCACCATTTTTGAT-AGAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATACTGATAA
* *
690250 TAATCCC-TGT-TTTTTCAGGATTAGGCACCAC
129 TAATCCCAT-TCTTTTT-AGGATTAGGTACCAT
**** * ** * * * **** **
690281 AAATGTTGTCTTCTCCTTAGGATACATCATAATGATGCTTTGGTTTTGCGAGAAGGGC-TTT-TT
1 AAACACAGTCTCCTTATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCTT
* * * ** * * * *
690344 TCCCACCAATTTTTG-TA-AAGTCTAAGTTCGTGC-CCCAAATGTGACAAACATGGATTCT-AGT
66 TTCCACC-ATTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATATGACAAACAAGAATACTGA-T
** * ** **
690405 AA-AGATTTTCGTTAATTTT-GTGATTAGGTATTAT
127 AATA-A-TCCCATTCTTTTTAG-GATTAGGTACCAT
* * * * * ** * *
690439 AAACACATTCTGCTCT-TTAGGATAAATGATATTGATGATTTTATTTTGCAT--GGAAATCTTTT
1 AAACACAGTCTCCT-TATTAGGATACATGACATTGATG-CTTTGGTTT-CATAAGAAAAGCTTTT
* ** ** * ** * * * * * *
690501 CTTTACC-TTATTTTTCTTAAAATCAAAGTTAATC-CTTTAAATAAGTCAAGCATCG-ATTCTCA
63 CTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTC-TTAAATATGACAAACA-AGAATACTGA
* * * * * * *
690563 TAACAGTCTCCATTC-TCTTCGTGATT-GAGAAGCAA
126 TAATAATC-CCATTCTTTTTAG-GATTAG-GTACCAT
* * * * * * * *
690598 AAAAACATTCT-GTTCATTTGGATGCATGATATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTC-
1 AAACACAGTCTCCTT-ATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCT
* * * * *
690661 TTTCCATCATTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACAAGAATACTGATAAT
65 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATACTGATAAT
* *
690726 GATCACCATT-TTTTTCAAGATTAGGTACCAT
130 AATC-CCATTCTTTTT-AGGATTAGGTACCAT
* * * ** * *
690757 AAACATAGTCTTCC-TATTAGGATACACGA-TTTGATGCTTTATTTTCACAAGAAAGGC-TTTC-
1 AAACACAGTC-TCCTTATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCT
* * * * * * * *
690818 TTCCCCCCAATTTTT-ATA-AAGTCTAAA-TTCG-CGCCTCAAATGA-GACAAACATGGATTCT-
65 TTTCCACC-ATTTTTGATAGAA-TC-AAAGTTTGTC-TCTTAAAT-ATGACAAACAAGAATACTG
* ** * * * *
690877 AGTAATGATCTTTATTC-ATTTAGTGATTTGGCACTAT
125 A-TAATAATC-CCATTCTTTTTAG-GATTAGGTACCAT
* * * * * * ** * * * * *
690914 AAACACATTCTCCTCATTAGGATAAATGATACTGATGATTTTCTTTTACAATGGAAATCGTTTCT
1 AAACACAGTCTCCTTATTAGGATACATGACATTGATGCTTTGGTTTCATAA-GAAAAGCTTTTCT
** ** *** * *** * * * * *
690979 TAGCC-TTATTTTCCTTAAAATCAAAGTTCAACTTTTAAATATGGCAAGCATCG-ATTCTCG-TA
65 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA-AGAATACT-GATA
* * * * * * *
691041 ATAGTCTCTATTCTTTTTAAGATTGGGAAGCAA
128 ATAATC-CCATTCTTTTTAGGATTAGGTACCAT
* * *
691074 AAACACATTC-CCTTCATTAGGATACATTACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCT
1 AAACACAGTCTCCTT-ATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCT
691138 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATACTGATAAT
65 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATACTGATAAT
*
691203 AATCCC-TTTTTTTTCAGGATTAGGTACCAT
130 AATCCCATTCTTTTT-AGGATTAGGTACCAT
*** * ** * * *
691233 AAATGTAGTCTTCTTATTAGGATACACAACATTGATGCTTTGGTTTCACAAGGAAGGC-TTTC-T
1 AAACACAGTCTCCTTATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCTT
* * * * * * * *
691296 TCCCCCCAATTTTT-ATA-AAGTCTAAGTTCGTGC-CTCAAATGA-GACAAACATGGATTCT-AG
66 TTCCACC-ATTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAAT-ATGACAAACAAGAATACTGA-
** * * * * *
691356 TAA-AGATCTTTATTC-ATTTGGTGATTTGGCACTAT
126 TAATA-ATC-CCATTCTTTTTAG-GATTAGGTACCAT
* * * * ** *
691391 AAACACATTCTCCTCATTAGGATGA-ATGATATTGATGATTTTCTTTTGCAT--GAAAATCTTTT
1 AAACACAGTCTCCTTATTAGGAT-ACATGACATTGATG-CTTTGGTTT-CATAAGAAAAGCTTTT
*** * *** * ** * * ** *
691453 CTGAGCC-CTATTTTCCTTAAAATCAAAGTTAATCTTTTAAATATTG-CAAGCATTAATTCTCG-
63 CTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATA-TGACAAACAAGAATACT-GA
* ** * * * *
691515 TAATAGTCTCCATTCTTTTTAACATTGGGAAGCAA
126 TAATAATC-CCATTCTTTTTAGGATTAGGTACCAT
* * *
691550 AAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTC-
1 AAACACAGTCTCCTT-ATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCT
* * *
691613 TTTCCACCATTCTTGATAGAATCAGAGTTTGTCTCTTAAATACGACAAACAAGAATACTGATAAT
65 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATACTGATAAT
* *
691678 AATCCCCGTTCTTTTTAGGATTAGGTAGCAT
130 AAT-CCCATTCTTTTTAGGATTAGGTACCAT
** * * * * *
691709 AAACTTAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCACAAGAAAGGCTTTT-TT
1 AAACACAGTCTCCTTATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCTT
691773 TTCACACCAATTTTTG
66 TTC-CACC-ATTTTTG
691789 TAAAGTCTTA
Statistics
Matches: 1734, Mismatches: 560, Indels: 329
0.66 0.21 0.13
Matches are distributed among these distances:
155 3 0.00
156 62 0.04
157 266 0.15
158 367 0.21
159 622 0.36
160 380 0.22
161 34 0.02
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (159 bp):
AAACACAGTCTCCTTATTAGGATACATGACATTGATGCTTTGGTTTCATAAGAAAAGCTTTTCTT
TTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACAAGAATACTGATAATA
ATCCCATTCTTTTTAGGATTAGGTACCAT
Found at i:692827 original size:395 final size:395
Alignment explanation
Indices: 692077--692851 Score: 1131
Period size: 395 Copynumber: 2.0 Consensus size: 395
692067 TTGGTGTCAT
692077 AAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
692142 TGAATACTCAAACTAATCCCCATTCTTTTCAGGATTAGGCACCATAACGTAGTCTCCTCATTAGG
66 TGAATACTCAAACTAATCCCCATTCTTTTCAAGATTAGACACCATAACATAGTCTCCTCATTAGA
* * * * * *
692207 ATACATCATATTGACGCTTTGGTTTCGTAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCT
131 ATACATCATAATGACGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTCTGTAAAGTCT
* *
692272 AAGTTCGTGACTCAAATGAGACAAACATGGATTCTTGTAATGATATTCATTCTTTTGGTCATTAG
196 AAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAAAGATATTCATTCTTTTGGTCATTAG
* *
692337 ACACTATAAACAGATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTAGCATGAAAATC
261 ACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTATTTAGCATGAAAATC
* * * * * *
692402 TTTTCTTTGCCCTATTTTCCTTACAATCAAAGTTCATCCTTTAAATAAGGCAAGCCACGTTTGGG
326 TTTTCCTTACCCTATTTTCCTTAAAATCAAAGTTAATCCTTAAAATAAAGCAAGCCACGTTTGGG
692467 GTTGC
391 GTTGC
* * * *
692472 AAGAAAAGCTTTT-TTTGCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
* ** * *
692536 TGAATACTCATACTAATCCCTGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTTG
66 TGAATACTCAAACTAATCCCCATTCTTTTCAAGATTAGACACCAT-AACATAGTCTCCTCATTAG
* * *
692601 AATAGATCATAATGATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTCTGTAAAGTC
130 AATACATCATAATGACGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTCTGTAAAGTC
* * * *
692666 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTT-GTGATT
195 TAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAAAGATATTCATTC-TTTTGGTCATT
** * * *
692730 AGGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAAAA
259 AGACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTATTTAGCATGAAAA
* *
692795 TCTTTTCCTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTAAAATAAAGCAAGC
324 TCTTTTCCTTACCCTATTTTCCTTAAAATCAAAGTTAATCCTTAAAATAAAGCAAGC
692852 ATCGATTCTC
Statistics
Matches: 335, Mismatches: 43, Indels: 4
0.88 0.11 0.01
Matches are distributed among these distances:
394 87 0.26
395 244 0.73
396 4 0.01
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (395 bp):
AAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
TGAATACTCAAACTAATCCCCATTCTTTTCAAGATTAGACACCATAACATAGTCTCCTCATTAGA
ATACATCATAATGACGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTCTGTAAAGTCT
AAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAAAGATATTCATTCTTTTGGTCATTAG
ACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTATTTAGCATGAAAATC
TTTTCCTTACCCTATTTTCCTTAAAATCAAAGTTAATCCTTAAAATAAAGCAAGCCACGTTTGGG
GTTGC
Found at i:694267 original size:475 final size:476
Alignment explanation
Indices: 692472--695223 Score: 3357
Period size: 475 Copynumber: 5.8 Consensus size: 476
692462 TTGGGGTTGC
* *
692472 AAGAAAAGCTTTT-TTTGCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
692536 TGAATACTCATACTAATCCCTGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTTG
66 AGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAG
* * * * * *
692601 AATAGATCATAATGATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTCTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
**
692666 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTA
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTA
* *
692731 GGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAAAAT
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * * * * *
692796 CTTTTCCTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTAAAATAAAGCAAGCATCGATTCT
326 CTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCT
* * * * * *
692861 CGTAACAGTCTCCATT-CTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGCAT
391 CATAATAGTCTCCATTCCTTTT-AAGATTGGGAAGCAAAAACACATTTCCTTTATTAGGATACAT
*
692925 GATATTGATGCTTTGGGGTCGT
455 GATATTGATGCTTTGGTGTCGT
* * ** *
692947 AAGAAAAGCTTTTCTTTCCATCGTTTGTGGCAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * ** * * * *
693012 AGAATACTGATAATTGTCCCCGTTTTTTTCACGATTAGGTACCATAAACATAGTCTTCTTATTAG
66 AGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAG
* * * *
693077 GATACA-CGAT-TTGATGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* ** * * *
693140 CTAAATTCGCACCTCAAATGAGACAAGCATGGATTCTAGTAATGATCTTTATTCATTTAGTGATT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATT
* * * *
693205 TGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAA
** * * *** *
693270 ATCTTTTC-TTAGCCTTATTCACCTTAAAATCAAAGTTCATCTTTTAAATATGGCAATCATT-GA
324 ATCTTTTCTTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGC-TTCGA
* * * * * * *
693333 TTCTCGTAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAACCACCTTCCCTTAATTAGGATA
387 TTCTCATAATAGTCTCCATTCCTTTTAAGATTGGGAAGCAAAAACACATTTCCTTTATTAGGATA
*
693398 CATGACATTGATGCTTTGGTGTCGT
452 CATGATATTGATGCTTTGGTGTCGT
* *
693423 AAGAAAAGCATTTCTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
1 AAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * *** *
693488 AAGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGACAGGGTAAACATAGTCTTCTTATTA
65 AAGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
**
693553 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTTTCATACCAATTTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-TT-TTTTCCCACCAATTTTTGTAAA
* * * * * * * * *
693618 GTCTAAGTTCGCGCCTCTAATGAGATACATATAGATTCTAGTAAATATCTTTTTTCATTTTTTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGA
* * *
693683 ATAGGTATTATAAACA-ATTCTCCTC-TTCAGGATAAAAGATATTGATGATTTTATTTTGCATGG
258 TTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGG
*
693746 AAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGA
322 AAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGA
* * * * *
693811 TTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTTCCTTTATTAGGATA
387 TTCTCATAATAGTCTCCATTCCTTTTAAGATTGGGAAGCAAAAACACATTTCCTTTATTAGGATA
* *
693876 CACGA-AGTTGATGCTTTGGTGTCAT
452 CATGATA-TTGATGCTTTGGTGTCGT
* * * * * *
693901 AAGAGAAGCTTTTCTTTCCACCATTTTTGATAAAATCAATGTTTGTCTCTCAAATACAACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * **
693966 TGAATACTCATACTAATCCCCGTT-TTTTCAGGATTCGGCACCACAAATGTAGTCTTCTCATTAG
66 AGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAG
* * * * ** *
694030 AATACATCACAATGATGCTTTGGTTTTGTGAGAATGGCTTTTTTCCCACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * *
694095 TAAGTTCGTGCCCCAAATGTGACAAACATGGATTCTAGTAAAGAT-TTTCGTTCATTTTGTGATT
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTT-ATTCATTTTGTGATT
* *
694159 AGGTACTATAAACACATTCTGCTCTTTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * ** *
694224 TCTTTTCTTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTTAAAGAAGTCAAGCATCGATTC
325 TCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTC
* * * * * *
694289 TCATAACAGTCTCCATT-CTTTTCATGATTGAGAAGCAAAAAAACA-TT-CTGTTCATTTGGATG
390 TCATAATAGTCTCCATTCCTTTT-AAGATTGGGAAGCAAAAACACATTTCCT-TT-ATTAGGATA
694351 CATGATATTGATGCTTTGGTGTCGT
452 CATGATATTGATGCTTTGGTGTCGT
* * * *
694376 AAGAAAAGCTTTTCTTTCCATCGTTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * ** * ** * *
694441 AGAATACTGATAATAATCCCTTTTTTTTTTGGGATTAGGTACCATAAACATAGTCTTCTTATTAG
66 AGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAG
*
694506 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAAG
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
* * * *
694571 TCTTAGTTCGTTCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCATTT-TTCATTTTGTGA
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATC-TTTATTCATTTTGTGA
* * *
694635 ATAGGTACTATAAACA-ATTCTCCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTACGTG
258 TTAGGTACTATAAACACATTCT-CCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATG
* *
694698 GAAATCTTTTCTTTACATTATTTTCCTTAAAATCAAAATTCATCCTTTAAACAAACCAAGCTTCG
321 GAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCG
* * * * *
694763 ATTCTCATAATAG-CCCTCATTCCTTTTAAGATTGGGAAACGAACACACA-TTCACTTTATTAAG
386 ATTCTCATAATAGTCTC-CATTCCTTTTAAGATTGGGAAGCAAAAACACATTTC-CTTTATTAGG
* * * *
694826 ATAGATGAAATTAATGCTTTGGTGTCAT
449 ATACATGATATTGATGCTTTGGTGTCGT
* * *
694854 AAGAAAAGCTTTTCTTTCCACCGTTATCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * *
694919 TGAATACTCAAACTAATCCCCATTATTTTCAGGATTAGGCACCAT-AACGTAGTCTCCTCATTAG
66 AGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAG
* * *
694983 GATACATCATATTGACGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * * * * *
695048 TAAGTTCGTGACTCAAATGAGACAAACATGGATTCTTGTAATGATATTCATTCTTTTTGTCATTA
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTA
** * * * * *
695113 GACACTATAAACAGATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTAGCATGAAAAT
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * *
695178 CTTTTCTTTGCCCTATTTTCCTTAGAATCAAAGTTCATGCTTTAAA
326 CTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAA
695224 TAAGGCAAGC
Statistics
Matches: 1933, Mismatches: 308, Indels: 72
0.84 0.13 0.03
Matches are distributed among these distances:
473 5 0.00
474 95 0.05
475 573 0.30
476 376 0.19
477 243 0.13
478 506 0.26
479 49 0.03
480 86 0.04
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (476 bp):
AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
AGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAG
GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTA
GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
CTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCT
CATAATAGTCTCCATTCCTTTTAAGATTGGGAAGCAAAAACACATTTCCTTTATTAGGATACATG
ATATTGATGCTTTGGTGTCGT
Found at i:694746 original size:953 final size:947
Alignment explanation
Indices: 692472--695233 Score: 3652
Period size: 953 Copynumber: 2.9 Consensus size: 947
692462 TTGGGGTTGC
* *
692472 AAGAAAAGCTTTT-TTTGCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * *
692536 TGAATACTCATACTAATCCCTGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTTG
66 AGAATACTCATACTAATCCCTATTCTTTTTAGGATTAGACACCATAAACATAGTCTTCTTATTAG
* * * * * * *
692601 AATAGATCATAATGATGCTTTGGTTTTGCAAGAAAGGC--ATTTTTCCCACCAATTTCTGTAAAG
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAAG
* * * *
692664 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGAT
196 TCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCTT-TTTCATTTTGTGAA
* *
692729 TAGGTACTATAAACACATTCTGCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGAA
260 TAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * * * * * *
692793 AATCTTTTCCTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTAAAATAAAGCAAGCATCGAT
323 AATCTTTTCTTTACATTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGAT
* * * * * * * * * * *
692858 TCTCGTAACAGTCTCCATT-CTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATG
388 TCTCATAATAGCCCCCATTCCTTTT-AAGATTGGGAAACGAACACACATTTCCTTTATTAGGATA
* * * * ** *
692922 CATGATATTGATGCTTTGGGGTCGTAAGAAAAGCTTTTCTTTCCATCGTTTGTGGCAGAATCAAA
452 CATGA-ATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAA
* * * * ** * *
692987 GTTTGTCTCTTAAATACGACACACAAGAATACTGATAATTGTCCCCGTTTTTTTCACGATTAGGT
516 GTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCG-TTTTTTCAGGATTAGGC
* * * *
693052 ACCATAAACATAGTCTTCTTATTAGGATACA-CGATTTGATGCTTTAGTTTCGCAAGAAAGGCTT
580 ACCA-AAACGTAGTCTTCTCATTAGGATACATC-AATTGATGCTTTGGTTTCG-AAGAAAGGCTT
* * * * ** *
693116 TCTTCCCCCCAATTTTTATAAAGTCTAAATTCGCACCTCAAATGAGACAAGCATGGATTCTAGTA
642 TTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
* *
693181 ATGATCTTT-ATTCATTTAGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
707 ATGAT-TTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* **
693245 TTGATGATTTTCTTTTACAATGGAAATCTTTTC-TTAGCCTTATTCACCTTAAAATCAAAGTTCA
771 TTGATGATTTTCTTTTGC-ATGGAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATCAAAGTTCA
* * * * * * * * *
693309 TCTTTTAAATATGGCAATCATTGATTCTCGTAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAA
834 TCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAA
** *
693374 AACCACCTTCCCTTAATTAGGATACATGACATTGATGCTTTGGTGTCGT
899 AAAAACATTCCCTTAATTAGGATACATGACATTGATGCTTTGGTGTCGT
* *
693423 AAGAAAAGCATTTCTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
1 AAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* ***
693488 AAGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGACAGGGTAAACATAGTCTTCTTATTA
65 AAGAATACTCATACTAATCCCTATTCTTTTTAGGATTAGACACCATAAACATAGTCTTCTTATTA
* *
693553 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTTTCATACCAATTTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAA
* * * * * *
693618 GTCTAAGTTCGCGCCTCTAATGAGATACATATAGATTCTAGTAAATATCTTTTTTCATTTTTTGA
195 GTCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATC-TTTTTCATTTTGTGA
* *
693683 ATAGGTATTATAAACAATTCTCCTCTTCAGGATAAAAGATATTGATGATTTTATTTTGCATGGAA
259 ATAGGTACTATAAACAATTCTCCTCTTCAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
*
693748 ATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATT
324 ATCTTTTCTTTACATTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATT
*
693813 CTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTTCCTTTATTAGGATACA
389 CTCATAATAGCCCCCATTCCTTTTAAGATTGGGAAACGAACACACATTTCCTTTATTAGGATACA
* * * *
693878 CGAAGTTGATGCTTTGGTGTCATAAGAGAAGCTTTTCTTTCCACCATTTTTGATAAAATCAATGT
454 TGAA-TTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGT
* * *
693943 TTGTCTCTCAAATACAACAAACATGAATACTCATACTAATCCCCGTTTTTTCAGGATTCGGCACC
518 TTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTCAGGATTAGGCACC
* * * * * *
694008 ACAAATGTAGTCTTCTCATTAGAATACATCACAATGATGCTTTGGTTTTGTGAGAATGGCTTTTT
583 A-AAACGTAGTCTTCTCATTAGGATACATCA-ATTGATGCTTTGGTTTCG-AAGAAAGGCTTTTT
* * *
694073 TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCCCAAATGTGACAAACATGGATTCTAGTAAAG
645 TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATG
* * * *
694138 ATTTTCGTTCATTTTGTGATTAGGTACTATAAACACATTCTGCTCTTTAGGATAAATGATATTGA
710 ATTTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGA
* * *
694203 TGATTTTATTTTGCATGGAAATCTTTTCTTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTT
775 TGATTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTT
* * *
694268 AAAGAAGTCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCATGATTGAGAAGCAAAAAAAC
840 AAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAAAAC
** * * * *
694333 ATTCTGTTCATTTGGATGCATGATATTGATGCTTTGGTGTCGT
905 ATTCCCTTAATTAGGATACATGACATTGATGCTTTGGTGTCGT
* * * *
694376 AAGAAAAGCTTTTCTTTCCATCGTTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * **
694441 AGAATACTGATAATAATCCCTTTTTTTTTTGGGATTAGGTACCATAAACATAGTCTTCTTATTAG
66 AGAATACTCATACTAATCCCTATTCTTTTTAGGATTAGACACCATAAACATAGTCTTCTTATTAG
694506 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAAG
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAAG
* *
694571 TCTTAGTTCGTTCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCATTTTTCATTTTGTGAA
196 TCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATC-TTTTTCATTTTGTGAA
* *
694636 TAGGTACTATAAACAATTCTCCCTCTTCAGGATAAATGATATTGATGATTTTATTTTACGTGGAA
260 TAGGTACTATAAACAATTCT-CCTCTTCAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
*
694701 ATCTTTTCTTTACATTATTTTCCTTAAAATCAAAATTCATCCTTTAAACAAACCAAGCTTCGATT
324 ATCTTTTCTTTACATTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATT
* * *
694766 CTCATAATAGCCCTCATTCCTTTTAAGATTGGGAAACGAACACACA-TTCACTTTATTAAGATAG
389 CTCATAATAGCCCCCATTCCTTTTAAGATTGGGAAACGAACACACATTTC-CTTTATTAGGATAC
* * *
694830 ATGAAATTAATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTATCGATAAAATCAAAG
453 ATG-AATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAG
* *
694895 TTTGTCTCTTAAATACGACAAACATGAATACTCAAACTAATCCCCATTATTTTCAGGATTAGGCA
517 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTT-TTTTCAGGATTAGGCA
* * * *
694960 CCATAACGTAGTCTCCTCATTAGGATACATCATATTGACGCTTTGGTTTCGCAGGAAAGGCTTTT
581 CCAAAACGTAGTCTTCTCATTAGGATACATCA-ATTGATGCTTTGGTTTCG-AAGAAAGGCTTTT
* * *
695025 TTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGACTCAAATGAGACAAACATGGATTCTTGTAAT
644 TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAT
* * * * * *
695090 GATATTCATTCTTTTTGTCATTAGACACTATAAACAGATTCTCCTCAATAGGATAAATGATATTG
709 GATTTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTG
* * * * * *
695155 ATGATTTTCTTTAGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAGAATCAAAGTTCATGCTT
774 ATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTT
695220 TAAATAAGGCAAGC
839 TAAATAAGGCAAGC
695234 CACGTTTGGG
Statistics
Matches: 1573, Mismatches: 222, Indels: 30
0.86 0.12 0.02
Matches are distributed among these distances:
951 12 0.01
952 241 0.15
953 818 0.52
954 409 0.26
955 91 0.06
956 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (947 bp):
AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
AGAATACTCATACTAATCCCTATTCTTTTTAGGATTAGACACCATAAACATAGTCTTCTTATTAG
GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAAG
TCTAAGTTCGTGCCTCTAATGAGATAAACATGGATTCTAGTAAAGATCTTTTTCATTTTGTGAAT
AGGTACTATAAACAATTCTCCTCTTCAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
CTTTTCTTTACATTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTCT
CATAATAGCCCCCATTCCTTTTAAGATTGGGAAACGAACACACATTTCCTTTATTAGGATACATG
AATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTG
TCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTCAGGATTAGGCACCAAA
ACGTAGTCTTCTCATTAGGATACATCAATTGATGCTTTGGTTTCGAAGAAAGGCTTTTTTCCCAC
CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATTTTC
ATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTT
TCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAA
GGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAAAACATTCCC
TTAATTAGGATACATGACATTGATGCTTTGGTGTCGT
Found at i:695604 original size:395 final size:395
Alignment explanation
Indices: 694854--695628 Score: 1122
Period size: 395 Copynumber: 2.0 Consensus size: 395
694844 TTGGTGTCAT
*
694854 AAGAAAAGCTTTTCTTTCCACCGTTATCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTATTCTTTCCACCGTTATCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
694919 TGAATACTCAAACTAATCCCCATTATTTTCAGGATTAGGCACCATAACGTAGTCTCCTCATTAGG
66 TGAATACTCAAACTAATCCCCATTATTTTCAAGATTAGACACCATAACATAGTCTCCTCATTAGA
* * * *
694984 ATACATCATATTGACGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCT
131 ATACATCATAATGACGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCT
* * *
695049 AAGTTCGTGACTCAAATGAGACAAACATGGATTCTTGTAATGATATTCATTCTTTTTGTCATTAG
196 AAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAAAGATATTCATTCATTTTGTCATTAG
*
695114 ACACTATAAACAGATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTAGCATGAAAATC
261 ACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTAGCATGAAAATC
* * * * * *
695179 TTTTCTTTGCCCTATTTTCCTTAGAATCAAAGTTCATGCTTTAAATAAGGCAAGCCACGTTTGGG
326 TTTTCCTTACCCTATTTTCCTTAAAATCAAAGTTAATCCTTTAAATAAAGCAAGCCACGTTTGGG
695244 GTTGC
391 GTTGC
* * * * *
695249 AAGAAAAGCTATT-TTTGCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTATTCTTTCCACCGTTATCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
* ** * * *
695313 TGAATACTCATACTAATCCCTGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTTG
66 TGAATACTCAAACTAATCCCCATTATTTTCAAGATTAGACACCAT-AACATAGTCTCCTCATTAG
* * *
695378 AATAGATCATAATGATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTC
130 AATACATCATAATGACGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTC
* * * *
695443 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTA
195 TAAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAAAGATATTCATTCATTTTGTCATTA
** * * *
695508 GGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTAGTTT-GCATGAAAA
260 GACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTT-CTTTAGCATGAAAA
* *
695572 TCTTTTCCTTACCTTATTTTTCTTAAAATCAAAGTTAATCCTTTAAATAAAGCAAGC
324 TCTTTTCCTTACCCTATTTTCCTTAAAATCAAAGTTAATCCTTTAAATAAAGCAAGC
695629 ATCGATTCTC
Statistics
Matches: 334, Mismatches: 44, Indels: 4
0.87 0.12 0.01
Matches are distributed among these distances:
394 85 0.25
395 246 0.74
396 3 0.01
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (395 bp):
AAGAAAAGCTATTCTTTCCACCGTTATCGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
TGAATACTCAAACTAATCCCCATTATTTTCAAGATTAGACACCATAACATAGTCTCCTCATTAGA
ATACATCATAATGACGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCT
AAGTTCGTGACTCAAATGAGACAAACATGGATTCTAGTAAAGATATTCATTCATTTTGTCATTAG
ACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTAGCATGAAAATC
TTTTCCTTACCCTATTTTCCTTAAAATCAAAGTTAATCCTTTAAATAAAGCAAGCCACGTTTGGG
GTTGC
Found at i:696157 original size:476 final size:476
Alignment explanation
Indices: 695249--726511 Score: 29382
Period size: 476 Copynumber: 66.2 Consensus size: 476
695239 TTGGGGTTGC
* * *
695249 AAGAAAAGCTATT-TTTGCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
695313 TGAATACTCATACTAATCCCTGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTTG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * *
695378 AATAGATCATAATGATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* **
695443 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTA
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * *
695508 GGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTAGTTTGCATGAAAAT
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * *
695573 CTTTTCCTTA-CCTTATTTTTCTTAAAATCAAAGTTAATCCTTTAAATAAAGCAAGCATCGATTC
326 CTTTT-CTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * *
695637 TCGTAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGCAT
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
*
695702 GATATTGATGCTTTGGTGTCGT
455 GACATTGATGCTTTGGTGTCGT
* * ** *
695724 AAGAAAAGCTTTTCTTTCCATCGTTTGTGGCAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * ** * * *
695789 AGAATACTGATAATTGTCCCCGTTTTTTTCACGATTAGGTACCATAAACATAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * * *
695854 GATACATGAT-TTGATGCTTTAGTTTTGCAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * *** *
695918 TAAATTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTCACTGATTT
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * * *
695983 GGCACTATAAACACATTCTCTTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAAA
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAAA
* * * * * *
696048 TCTTTTCTCAGCCTTATTCTCCTTAAAATCAAAGTTCATCTTTTAAATATGGGAATCATCGATTC
325 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* *
696113 TCATAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTACATTAGGATACAT
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
* *
696178 GACATTAATGCTTTGGTCTCGT
455 GACATTGATGCTTTGGTGTCGT
***
696200 AAGAAAAGCTTTTCTTTTCCAGTATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
1 AAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * * * * *
696265 AAGAATACTCATACTAATCCCCATTCTTTTTAGGGTTAGACAGCGTAAACATAGTCTTCTTATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * *
696330 TGATACATCACATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCACACCAATTTTTGTAAAG
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTTCCCACCAATTTTTGTAAAG
* * *** * * *
696395 TCTAAGTTCGTGCCTCTAATGAGATACGTATGGATTCTAGTAAAT-ATTTTTTTTCATTTTATGA
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTCATTTTGTGA
*
696459 ATAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCATGG
258 TTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGG
* * ** *
696522 AAATCTTTTCTTTA-CGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCG
322 AAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCG
* * * * * * *
696586 ATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTCCCTTTATTAGGAT
386 ATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
* *
696651 ACATGAAATTGATGCTTTGGTGTCAT
451 ACATGACATTGATGCTTTGGTGTCGT
* * * * * * *
696677 AAGAGAGGCTTTCCTTTCCACCATTTTTGATAAAATCAAAGTTTGTCTCTCAAATACAACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* ** *
696742 TGAATACTCATACTAATCCCCGTT-TTTTCAGGATTAGGCACCACAAATGTAGTCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* ** * *
696806 GATACATCATAATGATGCTTTGGTTTTACGAGAAGGGCTTTTTTCCCACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * * * *
696871 TAAGTTCGTGCCTCAAATGTGGCAAACATGGATTCTCGTAAAGATCTTTGTTCATTTTATGATTA
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * * *
696936 GGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATGGAAAT
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* *
697001 CTTTTCTTTA-CCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTT
326 CTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * * * *
697065 TCATAACAGTCTCCATT-TTTTTCAAGATTGAGAAGCAAAAACATATTCCTTTCATCACGATGCA
390 TCATAATAGTCTCCATTCTTTTT-AAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
697129 AGACATTGATGCTTTGGTGTCGT
454 TGACATTGATGCTTTGGTGTCGT
* *
697152 AAGAAAATCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTATATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * ** * * *
697217 AGAATACTGATAATAATACCTTTTTTTTTCAGGATTAGGTACCATAAACATAGTCTTCCTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
** * * * *
697282 GATACA-CGGCATTGATGCTTTGGTTTCGCAAGGAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * *
697346 CTAAGTTCGTGCCTCAATTGAGACAAACATGGATTCTAGTAAAGATCTTTATTCATTTGGTGATT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* ** * * *
697411 TGGCGCTATAAACACATTCTCCTCATGAGGATAAATGATATTGATGATTTT-TTTTGTATGGAAG
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * * *
697475 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATTGATTC
325 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * *
697540 TCATAACAGTCTCCATCCTTTTTAAGATTGGGAAGCAAAAACGCACTCGCTTCATTCA-GATACA
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATT-AGGATACA
* *
697604 TGACATTGATGCTTTGGTGTTGA
454 TGACATTGATGCTTTGGTGTCGT
* * *
697627 AAGAAAAGCTTTTCTTTCCACCATTTTTGATATAATCAAAGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * *
697692 AGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCATAAACATAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * *
697757 GATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTTTCACTCCAATTTTTGTAAAG
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
* ** * * *
697822 TCTAAGTTCATGCCTTTAATGAGATACATATGGATTCTAG---T-A-----A---A------GAT
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * *
697869 CA--TACTATAAACA-ATTCTCCTC-TTCAAGATAAATCATATTGATGATTTTATTTTGCATGGA
259 TAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * ** *
697930 AATCTTTTCTTTA-CGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGA
323 AATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * * * * * *
697994 TTCTCATAATAGCCCCCATTAC-TTTTAAGATTGGGAACCGAACACACATTCACTTTATTAGGAT
387 TTCTCATAATAGTCTCCATT-CTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
* *
698058 ACATGAAATTGATGCTTTGGTGTCAT
451 ACATGACATTGATGCTTTGGTGTCGT
* * * *
698084 AAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTATCTCTTAAATACGACAAACT
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
698149 TGAATACTCAAACTAATCCCCATTCTTTTCAGGATTAGGCACCAT-AACGTAGTCTCCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * * *
698213 GATACATCATATTGACGCTTTGGTTTTGCAGGAGAGGTTTTTTTCCTACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * * *
698278 TAAGATCGTGACTCAAATGAGACAAACATGGATTCTAGTAATGATATTCATTC-TTTTGGTCATT
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGATT
** * * *
698342 AGACACTATAAACACATTCTCCTCAGTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * *
698407 TCTTTTCTTTGCCCTATTTTCTTTACAATCAAAGTTCATCCTTTAAATAAGGCAAGCCA-CGATT
325 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG-CATCGATT
* * * * * * * * *
698471 CTCATAACAGTCTCCATTTTTTTTCATGATTTGGATGCCAAAACACATTCCCTTCTTTAGGGTAA
389 CTCATAATAGTCTCCATTCTTTTT-AAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* * *
698536 ATGACATTGATGCTTTGGGGTTGC
453 ATGACATTGATGCTTTGGTGTCGT
* * * *
698560 AAGAAAAGCTTTT-TTTGCACCGTTTTTGATAGAATCAAAGTTTGTCTCCTAAATATGACAAAGA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
698624 TGAATACTCATACTAATCCCTGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTTATTTG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * *
698689 AATAGATCATAATGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * *
698754 TAAGTTCGTGCCTCAAAAGAGACAAACATGGATTCTAGTAAAGATCTTCATTTATTTTGTGATTA
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * * * *
698819 GGTGCTATAAACACATTCTGCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAAT
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * * * *
698884 GTTTTCTTTA-TCTTATTTTTCTTAAAATCAAAGTTGATCCTTAAAATAAGGTAAGCATCGATTC
326 CTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * *
698948 TCATAACAGTCTCCATT-TTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGCA
390 TCATAATAGTCTCCATTCTTTTT-AAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
699012 TGACACTGATGCTTTGGTGTCGT
454 TGACATTGATGCTTTGGTGTCGT
* * * *
699035 AAGAAAAGCTTTTCTTTCCATCGTTTATGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
699100 AGAATA--C-T-C--A---CCGTTTTTTTCAAGATTAGGTACCATAAACATAGTCTTCCTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * *
699156 GATACA-CGAT-GTGATGCTTTAGTTTCACAAGAAAGG-TTTTCTTCCCCCCAATTTTTATAAAG
131 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTCCCACCAATTTTTGTAAAG
* * *
699218 TCTAAATTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGAT
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * * *
699283 TTGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGGA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGA
* * * * *
699348 AATCGTTGCTTAGCCTTATTTTCCTTAAAATCAAAGTTCAACTTTTAAATATGGCAAGCATCGAT
323 AATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
*
699413 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTACATTAGGATAC
388 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
*
699478 ATGACATTGATGCTTTGGTGTTGT
453 ATGACATTGATGCTTTGGTGTCGT
* *
699502 AAGAAAAGCTTTTCTTTTCCACCATTTCTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
1 AAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * * *
699567 ATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGACAGCGTAAACATAGTCTTCTGATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
*
699632 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * * * *
699697 GTCTAAGTTCGTGCCTCTATTGAGATC-CATATGGATTCTAGTAAAGATCTTTTTTCATTTTTTG
193 GTCTAAGTTCGTGCCTCAAATGAGA-CAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTG
* * * * *
699761 AATA-GTGCTATAAACA-ATTCTCCTCTTTAGGATAAATGATGTTGATGATCTTATTTTGCATGG
257 ATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGG
* * * ** *
699824 AAATCTTTTCTTTA-CTTTATTTTCCTTAAAATGAAAGTTCATCCTTTAAACAAACCAAGCTTCG
322 AAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCG
* * * * * * * * * ** *
699888 ATTCTCATAATAGCCACCGTTCCTTTTAAGATTGGGAATCGAACACATATTCACTTTTTTAGGAC
386 ATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
* *
699953 ACATGAAATTGATGCTTTGGTGTCAT
451 ACATGACATTGATGCTTTGGTGTCGT
* * * *
699979 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTATCTCTTAAAAACAACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * ** * *
700044 TGAATACTCATACTAAACCTCATTCTTTTCAGGATAAGGCACCACAAACGCAGCCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * ** * *
700109 GATACATCATATTGATGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTATGAATTTTCGGAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * * * * *
700174 TAAGTTCGTGACTCAAATGTGACAAACATGGATTCTACTAATGATATTCACTC-TTTTGGTCATT
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGATT
** * * *
700238 AGACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * * *
700303 TCTTTTCTTTGCCCTATTTTCCTTACAATCAAAGTTCATCCTTTAAATAAGGCAAACCTCGATTC
325 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * * * * * * * *
700368 TCGTAACAGTC-CCTATTCTTTTCATGATTTGGATGCCAGAACACATTCCCCTCTTTAGGGTA-A
390 TCATAATAGTCTCC-ATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* *
700431 CTGACTTTGATGCTTTGG-GGC-T
454 -TGACATTGATGCTTTGGTGTCGT
* *
700453 ACAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAACTATGACAAA
1 --AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAA
* * * *
700518 CATGAATACTCATACTAATCCCCGTTCTTTTCAAGATCAGGCACCATCAACATAGTCTTCTCATT
64 CATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
* ** * * * * *
700583 CA-AATACATCATAAAGATGCCTTGGTTTTGCAAGAAAGGCTTTTCTCCCACGAATTTTTGAAAA
129 -AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * * * * *
700647 GTCTATGTTCGTGCCTCAAATGAGACAAACGTAGATTCTAGTAAAGATCTTCATTAATTTTGTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* * * *
700712 TTAGGTACTATAAACATATTCTGCTCATTAGGATAGATGATATTGATGATTTTATTTTGCTTGGA
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * ** *
700777 AATCTTTTCTTTA-TCTTATTTTTCTTAAAATCAAAGTTCATCTTTTAAATAAGGCAAGGTTTGA
323 AATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * ** * *
700841 TTCTCATAACT-GTCTCCATTCGTTTCAAGATTGAAAAGCAAAAACACATTGCTTTCATTAGGAT
387 TTCTCATAA-TAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
* *
700905 GCATGACATAGATGCTTTGGTGTCGT
451 ACATGACATTGATGCTTTGGTGTCGT
* *
700931 AAGAAAAGCTTTTCTTTCCACCATTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * * * * * *
700996 AGAATACTGATAATAATCCCCATTTTTTTTAGGATTGGGTACAATAAACGTAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
** * * * *
701061 GATACAAGACATTGATGCTTTGGTTTCGCATGAAAGGCTTTCTTCCC-CACAATTTTTATAAAGT
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCAC-CAATTTTTGTAAAGT
* * *
701125 CTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTGGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
* * * *
701189 TAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTT-TTTTGTATGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * *
701253 ATCTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCCTCGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* ** * * * * * * * ** *
701318 CTCGTAGCAGTCTCCATTCTTTTCATGATTTGGATG-ACAAAACAGATTCCCTTCGTGAGGGCAA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCA-AAAACACATTCCCTTCATTAGGATAC
** * *
701382 ATGACATTGACACTTTGG-GATTGC
453 ATGACATTGATGCTTTGGTG-TCGT
* * * *
701406 AAGAAAAG-TTGTTCTTTCCATCGTTTTTGAAAGAATCAAAGTTTGTTTCTTAAATATGACAAAC
1 AAGAAAAGCTT-TTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * * **
701470 ATGTAGACAC-CATAAACATAAT---C-TTCTCATTC--GA--ATGCATCATAATGAT-G-CTT-
65 ATG-A-ATACTCAT--AC-TAATCCCCGTTCT-TTTCAGGATTAGGCACCATAAACATAGTCTTC
* * * * ** ** *
701523 TGGT-TTTGCA-AGA--A-A--G--GCTTT--TTTC-CCACCAA---TTTTTGT-AAAGTCTAA-
124 T--TATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTT-TCCCA--CCAAT
* ** * * ** * * * *
701571 GTTTGT-ACCTC-AA-AT-GGGACAAACAAGGATTCTAGTA-AAGATCTTCG-TTCATTTTGTGA
184 TTTTGTAAAGTCTAAGTTCGTG-C-CTCAA--A-T-GAG-ACAA-A-CATGGATTC---TAGT-A
* * * ** * * * *** * * *
701630 TTAGGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTGATGATT-T--T-ATTTTGCA
236 AT-GAT-CT-T-TATTCATTTTG-TGATTAGG-T-ACT-ATAAACA-CATTCTCCTCA-TTAGGA
** * ** *** * * *
701691 TGGAAATCTTTTCTTTGCCCGATTTT-TCTTAAAAT-CAAAGTTCATCCTTTAAATAAGGCAAGC
291 T--AAA--TGAT-ATTG-ATGATTTTAT-TTTGCATGGAAA--TC-T--TTT--CTTA-GC---C
* * *** * * * * * * * *
701754 ATTGATTTT-CATAACAGTCTCCGTTC-TTC-TCAAGATTGAGAAGCAA-AAACGCATTCCCTTC
338 -TT-ATTTTCCTTAA-AATCAAAGTTCATCCTTTAA-A-T-A-AGGCAAGCATCG-ATTCTCATA
** * * * * * * * ** * ** *
701815 ATCAGGATGCGTGAC-CTTGATGCTTTGGTGCCGTAAGAAA-AGC-TTTTCTTGCCACCGTT--T
395 AT-AGTCTCCAT-TCTTTTTAAG-ATTGG-GAAGCAA-AAACA-CATTCCCTT--CA---TTAGG
* * * * *
701875 TTGACA-GA-A-TGAAGGTTT-GTCTCTT
449 AT-ACATGACATTGATGCTTTGGTGTCGT
* * * *
701900 AAATACGACAAACAAGAATATTGATACTAATCC-CTGTTTTCTTCAGGATTAGGTACCAT-AAAC
1 --A-A-G---AA-AAG-CT-TT--T-CT-TTCCACCG-TTT-TT---GA-TA-G-A--ATCAAAG
* * * * * * * * * * * * * * *
701963 ATAGTCTTCTT-ATTA-G-GATACACG-ATAGTGATGCT--T---TGGT-TTTGCAAGA-AATGC
42 TTTGTC-TCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGC
** * *** ** * * * * **** ** *
702017 TTTCTTCCCCCCA-ACTT-TTATAAAG-T-C-T-A-AGTTCG-TGCCTCAAATGAGACAA-ACAT
106 -ACCATAAACATAGTCTTCTTATTAGGATACATCATA-TT-GATGCTTTGGTTTCG-CAAGA-AA
* * **** ** * * ** * * * **
702073 GG-ATTCTAGGGA-TGATCTTTATAAA-T-TTGGTGATTGGGCACT-ATAA--ACACATTTTCCC
166 GGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGT--TCGTGC-CTCA-AATGAGACA-----AA
* * * * * * *** * * *
702131 CATCAGGATGAATGATATTGATGAT-TTTCTT--TTGTTGGGAAATCTTTTCT-T-AGCCCTATT
222 CAT--GGAT---T-CTAGTAATGATCTTTATTCATT-TTGTG-ATTAGGTACTATAAACAC-ATT
* ** * * ** * * * * * *
702191 -T--TCCTT---A-AAACCAAAGTTCATCCTTTAAATATGGCA-AG-CATCGATTCTCGTAATAG
278 CTCCTCATTAGGATAAATGATA-TTGATGATTT-TATTTTGCATGGAAATC--TTTTC-T--TAG
* * * * * * * * *
702247 CCTCCATTCTTTTTAACATTAGGAAGCGAAAACACGTTCCCTTCATTAAGCTACATGACATTGAT
336 ---CC-TT-ATTTT--CCTTA-AAATC---AA-A-GTT-CATCCTTTAA-ATA-A-GGCA---A-
* * * * * * * * **
702312 GCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCA-CCATTTTTGATAGAAT-CAAAGTTTGTCTCT
380 GCATCGAT-TC-TCATAATAG----TC--TCCATTC-TTTTT-A-AGATTGGGAA----G---C-
** * * * ** ** * * *
702375 AAAATACGACA--AACATGAATACTCATACTAATCCCCATT-CT-TTTTAGGATTAGACAGCAT
426 AAAA-AC-ACATTCCCTTCATTA-GGATAC--AT-GACATTGATGCTTT-GG--T-GTC-G--T
* ** * * *** *
702435 AA-ACAAAG-TCTTC-TT--A----TTAGGATA-CATCATA--TTGATGCT-TTGGTTTCG-CAA
1 AAGA-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTG-T-CTCTTAAATACGACAA
* * ** ** * **** * * * *
702486 GAAAGGCTTTTTTTCATACCAATTGTGGTAAAGTCTAAGTTC-GTGCCTCTAATG-A-GATAAAC
63 -ACATG--AATACTCATACTAATCCCCGT----TCT--TTTCAG-G-AT-T-AGGCACCATAAAC
* * * ** * * ** * * *
702548 ATAG-ATTC-TAGTA--A-AGATC-T-TTTTTGCTTT--TGT-G--A-ATAGG-TACTAT--AAA
115 ATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCAC
* * ** ** * ** * ** * ***
702597 CAATTCTCCTCTTCAGGATAAATGATATTGATGATTTTATTTTGCG-CAGAA-ATCTTTTCT--T
180 CAATT-T-TTGTAAAGTCT-AA-G-T-TCG-TG-CCTCA-AATGAGACA-AACATGGATTCTAGT
* *** ** * * ** ***
702658 AA-CAT-TATT-TTCA--TTAAAACCAAAGTCCATCCTTTAAACAAACCAAGCT--TCGATTCTC
235 AATGATCT-TTATTCATTTTGTGA-TTAGGT--A--CTATAAAC--A-CATTCTCCTC-ATTAGG
*** * * * * * * ** ***
702716 ATAATATCCCCCATT-CT--TTTTAAGATTAGGAAGCGAACACACATTCCCTTTA---TTAGGAT
290 ATAA-AT--GATATTGATGATTTT-A-TTTTGCATG-GAA-A-TC-TTTTC-TTAGCCTTATTTT
* ** ** * ** * * *** * * * * *
702775 ACACAAAATTGATGCTT--TGGTGTCATAAGAGAAGCTTTTCTTTCCACCGTTTTTGATAA-AAT
345 CCTTAAAATCAAAG-TTCATCCT-T--TAA-ATAAG----GC-AAGCATCGATTCTCATAATAGT
** * * ** * * * * *
702837 C-AGAGTT-TGTCTCTCAA-ATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCTGG
400 CTCCA-TTCT-T-T-TTAAGAT-TGGGAAGCA--AA-A---ACAC--ATTCCC-TTC-ATT-AGG
** * * * *
702899 ATTAGGCACCACAAATGTAGTCTTCTCATTAGGATACATCAT
449 A-TA--CATGAC--AT-T-G-ATGCT--TT-GG-T--GTCGT
* * ** *
702941 AATG--ATGCTTTGGT-TTTGCGAGAAAGGCTTTTTTCTCATTAGAATCAAAGTTTGTCTCTTAA
1 AA-GAAAAGCTTT--TCTTT-C----CA--CCGTTTT-TGA-TAGAATCAAAGTTTGTCTCTTAA
* * * * * * * *
703003 ATATGACACATAAGAATACTGATAATAATCCCCGTTTTTTTCAGGATTAGGTACCATAAACATAG
54 ATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAG
* ** * *
703068 TCTTCTTATTAGGATGCA-CA-ATTTGATGCTTCAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAA
119 TCTTCTTATTAGGATACATCATA-TTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAA
* *
703131 TTTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATT
183 TTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATT
* * * *
703196 CATTTAGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCT
248 CATTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTAT
* * * *
703261 TTTACAATGGAAATCTTTTCTTTGCCTTATTTAT-CTTAAAATCAAAGTTCATCTTTTAAATAAT
313 TTTGC-ATGGAAATCTTTTCTTAGCCTTATTT-TCCTTAAAATCAAAGTTCATCCTTTAAATAAG
* * * * *
703325 GCAAGCATCGATTCTCATAACT-GTCTCCATTCGTTTCAAGATTGAGAAGCAAAAACACATTACT
376 GCAAGCATCGATTCTCATAA-TAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCC
*
703389 TTCATTAGGATGCATGACATTGATGCTTTGGTGTCGT
440 TTCATTAGGATACATGACATTGATGCTTTGGTGTCGT
* * *
703426 AAGAAAAGCTTTTCTTTCCACCGTTTTTAACAGAATCAAAGTTTGTCTCTTAAAAACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
703491 AGAATACT--GA-TAA------------T-A--A-T---CCCCATAAACGTAGTCTTCATATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * *
703534 GATACA-CGACATTGATGCTTTGGTTTCGCATGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
** * * *
703598 CTAAGTTAATGCCTCAAATAAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTGGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
* * * * * *
703662 TAGGCACTATAAACACATTATCCTCAATAGGATAAATGATATTGATGATTTTTTTTTTGTATGAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGA-TTTTATTTTGCATGGA
* * * * *
703727 AATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAACGCACGCCTCGAT
323 AATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
** * * * * * * ** *
703792 TCTCATAGCAGTCTCCATTCTTTTCATGATTTGGATGCCAAAACGCATTCCCTTCATTAGGGCAA
388 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* * * *
703857 ATGACAATGATGCTTTGGGGTTGC
453 ATGACATTGATGCTTTGGTGTCGT
* *
703881 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTTTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* *** * * *
703946 TGTAGACAC-CATA--AA-CATAGTCCTCTT----ATT-CG-A--AT--AC--A----TC-----
66 TG-A-ATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
*
703986 ---ATA-AT------GATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
129 AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
* * * * * * **
704041 TCTAAGTTTGTACCTCAAATTAGACAAACAAGGATTCCAGTAAAGATCTTCGTTCATTTTGTGAT
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
** *
704106 TAGGTACTATAAACACATTCGACTCATTAGGATAAATGATATTGACGATTTTATTTTGCATGGAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * *
704171 ATCTTTTCTT-TCCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * * * *
704235 CTCATAACAGTCTCAATTCTTCTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGCG
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* *
704300 TGACCTTGATGCTTTGGTGCCGT
454 TGACATTGATGCTTTGGTGTCGT
* * * *
704323 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATGAAGGTTTGTCTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
704388 AGAATATTGATACTAATCCCTC-TT-TTCTTTAGGATTAGGTACCATAAACATAGTCTTCTTATT
66 TGAATACTCATACTAATCCC-CGTTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
* * * * * *
704451 AGGATACA-CGATATTGATGCTTTGGTTTTGCAAGAAAGGATTTCTTCCCCCCAACTTTTATAAA
129 AGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
** * * * *
704515 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGCGATGATTTTTATACATTTGGTCA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* * * * * * *
704580 TTTGGCACTATAAACACATTCTCCTCATTAGGATGAATGATATTAATGATTTTCTTTTGTAAGGA
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * * * *
704645 AATCTTTTCTTAGCCCTAATTTCCTTAAAACCAAAGTTCAACTTTTAAATATGGCAAGCATCGAT
323 AATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * *
704710 TCTCGTAATAGTCTCCATTCTTTTTAACATTGGGAAGCGAAAACACATTCCCTTCATTAGGCTAC
388 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
*
704775 ATGACATTGATGCTTTGGTGCCGT
453 ATGACATTGATGCTTTGGTGTCGT
* * *
704799 AAGAAAAGCTTTTCTTTTCACCATTTTTGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
704864 TGAAAACTTATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCATAAACTTAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * *
704929 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTTCACACCCATTTTTCTAAA
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC---TTTTTTCCCACCAATTTTTGTAAA
** * * * * * *
704994 GTCTAAGTTCGTGCCTGTAGTGAGATAAACATGGATTCTAGTAAAGAGCTTTTTTCATTTTTTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* * * *
705059 ATAGGTGCTATAAA-AAATTCTCCTCTTTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* ** * * ** *
705123 AATCTTTTCTTTA-CGTTATTTTCCTTAAAAAAAAAGTACATCCTTTAAACAAACCAAGCTTCGA
323 AATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * * * * * *
705187 TTCTTATAATAGCCCCCATTCTTTTTAAGATTAGGAAGCGAACACACATTCCCTTTATTAGGATA
387 TTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATA
* *
705252 CATGAAATTGATGCTTTGGTGTCAT
452 CATGACATTGATGCTTTGGTGTCGT
* * * * *
705277 AAGAAAAGCTTTTATTTCCACCATTTTCGATAAAATCAAAGTTTGTCTCTCAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * ** *
705342 TAAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCACAAATGTAGTCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * *
705407 GATACATCATAATGATGCTTTGGTTTTGCGAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * *
705472 TAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTCTGATTA
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * * *
705537 GGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATGGAAAT
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * *
705602 CTTTTCTTTA-CCTTATTTTTCATAAAATCAAAGTTAATCCTTTAAATGAGGCAAGCATCGATTC
326 CTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * * *
705666 TCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACATATTCCCTTCATTAGGATGCAA
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
*
705731 GATATTGATGCTTTGGTGTCGT
455 GACATTGATGCTTTGGTGTCGT
* * * * *
705753 AAGAAAAGCTTTTCTTTCTATCGTTTATGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * * *
705818 AGAATACTGATAATAATCCCCATTTTTTTCAAGATTAGGTACCATAAACATAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* *
705883 GATACA-CA-ATTTGATGCTTTAGG-TTCGCAAGAAAGGCTTTCTTCTCC-CCAATTTTTATAAA
131 GATACATCATA-TTGATGCTTT-GGTTTCGCAAGAAAGGCTTTTTTC-CCACCAATTTTTGTAAA
* *
705944 GTCTAATTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* * * * *
706009 TTTGGCACTATAAACACATTCTCTTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGG
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGG
* * * * *
706074 AAATCTTTTCTTTGCCTTATTTTCCTTAAAATTAAAGTTCATCTTTTAAATATGGCAATCATCGA
322 AAATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* *
706139 TTCTCGTAATAGTCTCCATTCTTTTTAAGATTAGGAAGCAAAAACACATTCCCTTCATTAGGATA
387 TTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATA
*
706204 CATGACATTGATGCTTTGGTGTCAT
452 CATGACATTGATGCTTTGGTGTCGT
*
706229 AAGAAAAGCTTTTCTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
1 AAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * * *
706294 ATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGACAGCGTAAACATAGTCTTCTTATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * *
706359 GGATACATCATATTGATGCTTTAGTTTCGCAAGAAAGGCTTTTTTTTCACACCAAATTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * * * *
706424 GTCTAAGTTCGTGCCTCTAATGAGATACATATAGA-TCTAGTAAAT-ATCTTTTTTCATTTTTTG
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTCATTTTGTG
*
706487 AATAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCATG
257 ATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATG
* * ** *
706550 GAAATCTTTTCTTTA-CGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTC
321 GAAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* * * * * * *
706614 GATTCTCATAATA-TCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTCACTTTATTAGG
385 GATTCTCATAATAGT-CTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGG
* * *
706678 ATACATGAAATTGATTCTTTGGTGTCAT
449 ATACATGACATTGATGCTTTGGTGTCGT
* ** * *
706706 AAGAAAAGTTTTTCTTTCCACCGTTTTCCATAAAATCAAAGTTTATCTCTTAAGA-ACGACAAAC
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA-ATACGACAAAC
* * * ** * *
706770 ATGAATACTCATACTAATCCTCGTTCTTTCCAGGATTAGGCACCACAAACGCAATCTTCTCATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * * * **
706835 GCATGCATCATATTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTTTCATAAAGT
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
** *
706900 CTAAGTTCGTGAATCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTC-TTTTGGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
* ** * * *
706964 TAGGCACTATAAACACATTCTCCTCAACAGGATAAGTGATATTGATGATTTTCTTTTGCATGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * * *
707029 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATGCTTTAAATAAGGCAAGCCTTGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * * * * * * * *
707094 CTCGTAACAGTCCCCATTCTTTTCATGATTTGGATGCCAAAACACATTCCCCTCATTAGGGTAAA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
707159 TGACATTGATGCTTTGG-GGC-T
454 TGACATTGATGCTTTGGTGTCGT
* *
707180 ACAAGAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAA
1 --AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAA
* * *
707245 CATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATT
64 CATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
* ** * * * * **
707310 CA-AATACATCATAAAGAAGCTTTGGTTTTGCAAGAAAAGCTTTTCTCCCACCAATTTTTCAAAA
129 -AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * * * * *
707374 GTCTATGTTCGTGCCTCAAATGAGACAAATATAGATTCTAGTAAAGATCTTCATTAATTTTGTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* * * *
707439 TTTGGTACTGTAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCTTGGA
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * *
707504 AATCTTTTCTTTATCC-TATTTTTCTTAAAATCAAAGTTCATCTTTTAAATAATGCAAGCATCGA
323 AATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * * * * *
707568 TTCTCATAACT-GTCTCCATTCGTTTCAAGATTGAGAGGCAAAAACACATTTCTTTCATTAGGAT
387 TTCTCATAA-TAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
*
707632 GCATGACATTGATGCTTTGGTGTCGT
451 ACATGACATTGATGCTTTGGTGTCGT
*
707658 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
707723 AGAATACT--GA-TAA------------T-A--A-T---CCCCATAAACGTAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * *
707766 GATACA-CGACATTGATGCTTTGGTTTCGCATGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * *
707830 CTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTGGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
* * * * * *
707894 TAGGCACTATAAACAAATTCTCCTCAATAGGATAAATGATATTAATGATTTT-TTTTGTATGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * *
707958 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCCTTGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* ** * * * * * * * * ** *
708023 CTCGTAGCAATCTCCATTCTTTTCATGATTTGGATGCCAAACCGCATTCCCTTCATTAGGGCAAA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * *
708088 TGACATTGATGCTTTGGGGTTGC
454 TGACATTGATGCTTTGGTGTCGT
* * * * * *
708111 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAAAATGAAGGTTTGTCTCTTCAATACGATAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
708176 AGAATATTGATACTAATCCCTGTT-TTCTTCAGGATTAGGTACCATAAACATAGTCTTCTTATTA
66 TGAATACTCATACTAATCCCCGTTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * * * *
708240 GGATACA-CGATATTGATGCTTTGGTTTTGCAAGAAAGGATTTCTTCCCCCCAACTTTTATAAAG
130 GGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
** * * *
708304 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGCGATGATTTTTATACATTTGGTGAT
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * * * * *
708369 TTGGCACTATAAACACATTCTCCTCATTAGGATGAATGATATTGATGATTTTCTTTTGTAGGGAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * * *
708434 ATCTTTTCTTAGCCCTACTTTCCTTAAAACCAAAGTTCATCTTTTAAATATGGCAAGCATCGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * **
708499 CTCGTAATAGTCTCCATTCTTTTTAACATT-GGAAGCGAAAACACATTCCCTTCATCAGGCCACA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
708563 TGACATTGATGCTTTGGTGCCGT
454 TGACATTGATGCTTTGGTGTCGT
* *
708586 AAGAAAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
708651 TGAAAACTTATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCATAAACTTAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * *
708716 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCCATTTTTCTAAAG
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
** * * * * * * *
708781 TCTAAGTTCGTGCCTGTAGTGAGATAAACATGGATTCTAGTAAAGAGCTTTTTTCATTTTTTGAA
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * * * *
708846 TAGGTGCTATAAACA-ATTCTCCTCTTTAGGATAAATGATATTGATGATTTTAGTTTGCACGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* ** * * ** *
708910 ATCTTTTCTTTA-CATTATTTTCCTTAAAAAAAAAGTACATCCTTTAAACAAACCAAGCTTCGAT
324 ATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * ** * * *
708974 TCTTATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCGCACACACATTACCTTTATTAGGATAC
388 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* *
709039 ATGAAATTGATGCTTTGGTGTCAT
453 ATGACATTGATGCTTTGGTGTCGT
* * *
709063 AAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTGTCTCTCAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * ** *
709128 TGAATGCTTATACTAATCCCCGTTCTTTTCAGGATTAGGCACCACAAATGTAGTCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * *
709193 GATACATCATAATGATGTTTTGGTTTTGCGAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * *
709258 TAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTCTGATTA
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * * * *
709323 GGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATTGAAAT
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * *
709388 CTTTTCTTTA-CCTTATTTTTCTAAAAATCAAAGTTAATCCTTTAAATGAGGCAAGCATCGATTC
326 CTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * * * *
709452 TCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACCTTCCCTTCATTAGGCTGCAA
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
*
709517 GATATTGATGCTTTGGTGTCGT
455 GACATTGATGCTTTGGTGTCGT
* * *
709539 AAGAAAAGCTTTTCTTTCCATCGTTTGTGATAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * * *
709604 AGAATACTGATAATAATCCCCGTTTTTTTCAAGATTAGGTACCATAAACATATTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * *
709669 GATACA-CA-ATTTGATGCTTTAGTTTCGCAAGAAAAGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATCATA-TTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* ** * *
709732 CTAAATTCACGTCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGATT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * * * *
709797 TGGCACTATAAACACATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAA
* * * ** *
709862 ATCTTTTCTTTGCCATATTTTCCTTAAAATCAAAGTTCATCTTTTAAATTTGGCAATCATCGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
*
709927 CTCGTAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
709992 TGACATTGATGCTTTGGTGTCAT
454 TGACATTGATGCTTTGGTGTCGT
*
710015 AAGAAAAGCTTTTCTTTTCCACCATTTTTGATAG-----AA----------T-AATACGACAAAC
1 AAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * * * *
710064 ATGAATACTCATACAAATCCCCATTCTTTTTAGGATTAGACAGCGTAAACATAGTCTTCTTATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * *
710129 GGATACATCATATTGATGCTTTAGTTTCGCAAGAAAGGCTTTTTTTTCACACCAAATTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * * *
710194 GTCTAAGTTCGTGCCTCTAATGAGATACATATAGA-TCTAGTAAAT-ATCGTTT-TTCATTTTTT
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATC-TTTATTCATTTTGT
* *
710256 GAATAGGTACTGTAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCAT
256 GATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCAT
* * * ** *
710319 GGAAATCTTTTCTTTA-CGTTATTTTCCTTAAAATCATAGTTCATCCTTTAAACAAACCAAGCTT
320 GGAAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * * * * * *
710383 CGATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTCACTTTATTAGG
384 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGG
* * *
710448 ATACATGAAATTGATTCTTTGGTGTCAT
449 ATACATGACATTGATGCTTTGGTGTCGT
* ** * * *
710476 AAGAAAAGTTTTTCTTTCCACCGTTTCCGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
710541 TGAATACTCATACTAATCCTCGTTCTTTTCAGGATTAGGCACCACAAACGTAGTCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * *
710606 GATGCATCATATTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
** *
710671 TAAGTTCGTGAATCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTC-TTTTGGTCATT
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGATT
* ** * * *
710735 AGGCACTATAAACACATTCTCCTCAACAGGATAAGTGATATTGATGATTTTCTTTTGCATGAAAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * *
710800 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCCTTGATTC
325 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* ** * * * * * * ** *
710865 TCGTAGCAGTCTCCATTCTTTTCATGATTTGGATGCCAAAACGCATTCCCTTCATTAGGGCAAAT
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
* * *
710930 GACATTGATGCTTTGGGGTTGC
455 GACATTGATGCTTTGGTGTCGT
* * *
710952 AAGAAAAGCTTTTCTTTCCACCGTTTTTCATAGAATCAAAGTTTGTTTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
711017 TGTAGACAC-CATA-AAGAT---AG-TCTTCTC---ATT-CG-A--AT--AC--A----TC----
66 TG-A-ATACTCATACTA-ATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTAT
*
711057 ----ATA-AT------GATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
128 TAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * * * * * **
711111 GTCTAAGTTTGTACCTCAAATGGGACAAACAAGGATTCCAGTAAAGATCTTCGTTCATTTTGTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* *
711176 TTAGGTACTATAAACACATTCTACTCATTAGGATAAATGATATTGACGATTTTATTTTGCATGGA
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * *
711241 AATCTTTTCTT-TCCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGAT
323 AATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * * * *
711305 TCTCATAACAGTCTCAATTCTTCTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGC
388 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* * *
711370 GTGACCTTGATGCTTTGGTGCCGT
453 ATGACATTGATGCTTTGGTGTCGT
* * *
711394 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATGAAGGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * ** **
711459 AGAATATTGATACTAATCCCTATT-TTCTTCAGGATTAGGTTCCATAAACATAGTCTTCTTATTA
66 TGAATACTCATACTAATCCCCGTTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * *
711523 GGATACATCATATTGATGCTTTAGTTTCGCAAGAAAGGCTTTTTTTTCACACCAAATTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * * * *
711588 GTCTAAGTTCGTGCCTCTAATGAGATACATATAGA-TCTAGTAAAT-ATCTTTTTTCATTTTTTG
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTCATTTTGTG
* *
711651 AATAGGTACTATAAACA-ATTCTCCTC-TTCATGATAAATGATATTGATGATTTTATTTTGCATG
257 ATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATG
* * ** *
711714 GAAATCTTTTCTTTA-CGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTC
321 GAAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* * * * * * * *
711778 GATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTCACTTTATTAGGA
385 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGA
* * *
711843 TACATGAAATTGATTCTTTGGTGTCAT
450 TACATGACATTGATGCTTTGGTGTCGT
* ** * * *
711870 AAGAAAAGTTTTTCTTTCCACCGTTTTCCATAAAATCAAAGTTTATCGCTTAAGA-ACGACAAAC
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA-ATACGACAAAC
* * ** *
711934 ATGAATACTCATACTAATCCTCGTTCTTTCCAGGATTAGGCACCATAAACGCAGTCTTCTCATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * *
711999 GGATGCATCATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTCCTACCAATTTTCGTAAAGT
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
** * *
712064 CTAAGTTCGTGAATCAAATGAGACAAACATGGATTCTAGTAATGATTTTTATTC-TTTTGGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
* ** * * * *
712128 TAGGCACTATAAACACATTCTCCTCAACAGGATAAGTGATATTAATGATTTTCTTTTGCATGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * * *
712193 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGCTCATCCTTTAAATAAGGCAAGCCTTGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * * * * * * * *
712258 CTCGTAACAGTCCCCATTCTTTTCATGATTTGGATGCCAAAACACATTCCCCTCATTAGGGTAAA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
712323 TGACATTGATGCTTTGG-GGC-T
454 TGACATTGATGCTTTGGTGTCGT
* *
712344 ACAAGAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAA
1 --AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAA
* * *
712409 CATGAATACTCATACTAATCCCCGTTATTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATT
64 CATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
* ** * * * **
712474 CA-AATACATCATAAAGAAGCTTTGGTTTTGCAAGAAAGGCTTTTCTCCCACCAATTTTTCAAAA
129 -AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * * * * *
712538 GTCTATGTTCGTGCCTCAAATGAGACAAATATAGATTCTAGTAAAGATCTTCATTAATTTTGTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* * *
712603 TTAGGTACTGTAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCTTGGA
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * *
712668 AATCTTTTCTTTATCC-TATTTTTCTTAAAATCAAAGTTCATCTTTTAAATAATGCAAGCATCGA
323 AATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * * * *
712732 TTCTCATAACT-GTCTCCATTCGTTTCAAGATTGAGAAGCAAAAACACATTGCTTTCATTAGGAT
387 TTCTCATAA-TAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
*
712796 GCATGACATTGATGCTTTGGTGTCGT
451 ACATGACATTGATGCTTTGGTGTCGT
*
712822 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
712887 AGAATACT--GA-TAA------------T-A--A-T---CCCCATAAACGTAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * *
712930 GATACA-CGACATTGATGCTTTGGTTTCGCATGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * *
712994 CTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTGGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
* * * * *
713058 TAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTAATGATTTT-TTTTGTATGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * *
713122 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCCTTGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* ** * * * * * * * * ** *
713187 CTCGTAGCAATCTCCATTCTTTTCATGATTTGGATGCCAAACCGCATTCCCTTCATTAGGGCAAA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * *
713252 TGACATTGATGCTTTGGGGTTGC
454 TGACATTGATGCTTTGGTGTCGT
* * * * * *
713275 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAAAATGAAGGTTTGTCTCTTCAATACGATAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
713340 AGAATATTGATACTAATCCCTGTT-TTCTTCAGGATTAGGTACCATAAACATAGTCTTCTTATTA
66 TGAATACTCATACTAATCCCCGTTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * * * *
713404 GGATACA-CGATATTGATGCTTTGGTTTTGCAAGAAAGGATTTCTTCCCCCCAACTTTTATAAAG
130 GGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
** * * *
713468 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGCGATGATTTTTATACATTTGGTGAT
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * * * * *
713533 TTGGCACTATAAACACATTCTCCTCATTAGGATGAATGATATTGATGATTTTCTTTTGTAGGGAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * * *
713598 ATCTTTTCTTAGCCCTACTTTCCTTAAAACCAAAGTTCATCTTTTAAATATGGCAAGCATCGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * *
713663 CTCGTAATAGTCTCCATTCTTTTTAACATT-GGAAGCGAAAACACATTCCCTTCATCAGGCTACA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
713727 TGACATTGATGCTTTGGTGCCGT
454 TGACATTGATGCTTTGGTGTCGT
* *
713750 AAGAAAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
713815 TGAAAACTTATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCATAAACTTAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * *
713880 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCCATTTTTCTAAAG
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
** * * * * * * *
713945 TCTAAGTTCGTGCCTGTAGTGAGATAAACATGGATTCTAGTAAAGAGCTTTTTTCATTTTTTGAA
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * * * * *
714010 TAGGTGCTATAAATA-ATTCTCCTCTTTAGGATAAATGATATTGATGATTTTAGTTTGCACGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* ** * * ** *
714074 ATCTTTTCTTTA-CATTATTTTCCTTAAAAAAAAAGTACATCCTTTAAACAAACCAAGCTTCGAT
324 ATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * * * * *
714138 TCTTATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCGAACACACATTACCTTTATTAGGATAC
388 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* *
714203 ATGAAATTGATGCTTTGGTGTCAT
453 ATGACATTGATGCTTTGGTGTCGT
* * *
714227 AAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTGTCTCTCAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * ** *
714292 TGAATGCTTATACTAATCCCCGTTCTTTTCAGGATTAGGAACCACAAATGTAGTCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * *
714357 GATACATCATAATGATGTTTTGGTTTTGCGAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * *
714422 TAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTCTGATTA
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * * * *
714487 GGTACTACAAACACAATCTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATTGAAAT
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * *
714552 CTTTTCTTTA-CCTTATTTTTCTAAAAATCAAAGTTAATCCTTTAAATGAGGCAAGCATCGATTC
326 CTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * * * *
714616 TCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACCTTCCCTTCATTAGGCTGCAA
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
*
714681 GATATTGATGCTTTGGTGTCGT
455 GACATTGATGCTTTGGTGTCGT
* * * *
714703 AAGAAAAGCTTTTCTTTCCATCGTTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * * *
714768 AGAATACTGATAATAATCCCCGTTTTTTTCAAGATTAGGTACCATAAACATATTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * *
714833 GATACA-CA-ATTTGATGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATCATA-TTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* ** *
714896 CTAAATTCACGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGATT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * * * *
714961 TGGCACTATAAACACATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAA
* * * * ** *
715026 ATATTTTCTTTGCCATATTTTCCTTAAAATCAAAGTTCATCTTTTAAATTTGGCAATCATCGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
*
715091 CTCGTAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
715156 TGACATTGATGCTTTGGTGTCAT
454 TGACATTGATGCTTTGGTGTCGT
*
715179 AAGAAAAGCTTTTCTTTTCCACCATTTTTGATAG-----AA----------T-AATACGACAAAC
1 AAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * * * *
715228 ATGAATACTCATACAAATCCCCATTCTTTTTAGGATTAGACAGCGTAAACATAGTCTTCTTATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * *
715293 GGATACATCATATTGATGCTTTAGTTTCGCAAGAAAGGCTTTTTTTTCACACCAAATTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * * *
715358 GTCTAAGTTCGTGCCTCTAATGAGATACATATAGA-TCTAGTAAAT-ATCGTTT-TTCATTTTTT
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATC-TTTATTCATTTTGT
* *
715420 GAATAGGTACTGTAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCAT
256 GATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCAT
* * * ** *
715483 GGAAATCTTTTCTTTA-CGTTATTTTCCTTAAAATCATAGTTCATCCTTTAAACAAACCAAGCTT
320 GGAAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * * * * * *
715547 CGATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTCACTTTATTAGG
384 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGG
* * *
715612 ATACATGAAATTGATTCTTTGGTGTCAT
449 ATACATGACATTGATGCTTTGGTGTCGT
* ** * * *
715640 AAGAAAAGTTTTTCTTTCCACCGTTTCCGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
715705 TGAATACTCATACTAATCCTCGTTCTTTTCAGGATTAGGCACCACAAACGTAGTCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * *
715770 GATGCATCATATTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
** *
715835 TAAGTTCGTGAATCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTC-TTTTGGTCATT
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGATT
* ** * * *
715899 AGGCACTATAAACACATTCTCCTCAACAGGATAAGTGATATTGATGATTTTCTTTTGCATGAAAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * *
715964 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCCTTGATTC
325 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* ** * * * * * * ** *
716029 TCGTAGCAGTCTCCATTCTTTTCATGATTTGGATGCCAAAACGCATTCCCTTCATTAGGGCAAAT
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
* * *
716094 GACATTGATGCTTTGGGGTTGC
455 GACATTGATGCTTTGGTGTCGT
* * *
716116 AAGAAAAGCTTTTCTTTCCACCGTTTTTCATAGAATCAAAGTTTGTTTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
716181 TGTAGACAC-CATA-AAGAT---AG-TCTTCTC---ATT-CG-A--AT--AC--A----TC----
66 TG-A-ATACTCATACTA-ATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTAT
*
716221 ----ATA-AT------GATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
128 TAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * * * * * **
716275 GTCTAAGTTTGTACCTCAAATGGGACAAACAAGGATTCCAGTAAAGATCTTCGTTCATTTTGTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* *
716340 TTAGGTACTATAAACACATTCTACTCATTAGGATAAATGATATTGACGATTTTATTTTGCATGGA
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * *
716405 AATCTTTTCTT-TCCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGAT
323 AATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * * * *
716469 TCTCATAACAGTCTCAATTCTTCTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGC
388 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* * *
716534 GTGACCTTGATGCTTTGGTGCCGT
453 ATGACATTGATGCTTTGGTGTCGT
* * *
716558 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATGAAGGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * ** **
716623 AGAATATTGATACTAATCCCTATT-TTCTTCAGGATTAGGTTCCATAAACATAGTCTTCTTATTA
66 TGAATACTCATACTAATCCCCGTTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * *
716687 GGATACATCATATTGATGCTTTAGTTTCGCAAGAAAGGCTTTTTTTTCACACCAAATTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * * * *
716752 GTCTAAGTTCGTGCCTCTAATGAGATACATATAGA-TCTAGTAAAT-ATCTTTTTTCATTTTTTG
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTCATTTTGTG
*
716815 AATAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCATG
257 ATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATG
* * ** *
716878 GAAATCTTTTCTTTA-CGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTC
321 GAAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* * * * * * * *
716942 GATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTCACTTTATTAGGA
385 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGA
* * *
717007 TACATGAAATTGATTCTTTGGTGTCAT
450 TACATGACATTGATGCTTTGGTGTCGT
* ** * * *
717034 AAGAAAAGTTTTTCTTTCCACCGTTTTCCATAAAATCAAAGTTTATCGCTTAAGA-ACGACAAAC
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA-ATACGACAAAC
* * ** *
717098 ATGAATACTCATACTAATCCTCGTTCTTTCCAGGATTAGGCACCATAAACGCAGTCTTCTCATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * *
717163 GGATGCATCATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTCCTACCAATTTTCGTAAAGT
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
** * *
717228 CTAAGTTCGTGAATCAAATGAGACAAACATGGATTCTAGTAATGATTTTTATTC-TTTTGGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
* ** * * * *
717292 TAGGCACTATAAACACATTCTCCTCAACAGGATAAGTGATATTAATGATTTTCTTTTGCATGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * * *
717357 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGCTCATCCTTTAAATAAGGCAAGCCTTGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * * * * * * * *
717422 CTCGTAACAGTCCCCATTCTTTTCATGATTTGGATGCCAAAACACATTCCCCTCATTAGGGTAAA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
717487 TGACATTGATGCTTTGG-GGC-T
454 TGACATTGATGCTTTGGTGTCGT
* *
717508 ACAAGAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAA
1 --AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAA
* * *
717573 CATGAATACTCATACTAATCCCCGTTATTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATT
64 CATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
* ** * * * **
717638 CA-AATACATCATAAAGAAGCTTTGGTTTTGCAAGAAAGGCTTTTCTCCCACCAATTTTTCAAAA
129 -AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * * * * *
717702 GTCTATGTTCGTGCCTCAAATGAGACAAATATAGATTCTAGTAAAGATCTTCATTAATTTTGTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* * *
717767 TTAGGTACTGTAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCTTGGA
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * *
717832 AATCTTTTCTTTATCC-TATTTTTCTTAAAATCAAAGTTCATCTTTTAAATAATGCAAGCATCGA
323 AATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * * * *
717896 TTCTCATAACT-GTCTCCATTCGTTTCAAGATTGAGAAGCAAAAACACATTGCTTTCATTAGGAT
387 TTCTCATAA-TAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
*
717960 GCATGACATTGATGCTTTGGTGTCGT
451 ACATGACATTGATGCTTTGGTGTCGT
*
717986 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
718051 AGAATACT--GA-TAA------------T-A--A-T---CCCCATAAACGTAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * *
718094 GATACA-CGACATTGATGCTTTGGTTTCGCATGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * *
718158 CTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTGGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
* * * * *
718222 TAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTAATGATTTT-TTTTGTATGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * *
718286 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCCTTGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* ** * * * * * * * * ** *
718351 CTCGTAGCAATCTCCATTCTTTTCATGATTTGGATGCCAAACCGCATTCCCTTCATTAGGGCAAA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * *
718416 TGACATTGATGCTTTGGGGTTGC
454 TGACATTGATGCTTTGGTGTCGT
* * * * * *
718439 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAAAATGAAGGTTTGTCTCTTCAATACGATAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
718504 AGAATATTGATACTAATCCCTGTT-TTCTTCAGGATTAGGTACCATAAACATAGTCTTCTTATTA
66 TGAATACTCATACTAATCCCCGTTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * * * *
718568 GGATACA-CGATATTGATGCTTTGGTTTTGCAAGAAAGGATTTCTTCCCCCCAACTTTTATAAAG
130 GGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
** * * *
718632 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGCGATGATTTTTATACATTTGGTGAT
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * * * * *
718697 TTGGCACTATAAACACATTCTCCTCATTAGGATGAATGATATTGATGATTTTCTTTTGTAGGGAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * * *
718762 ATCTTTTCTTAGCCCTACTTTCCTTAAAACCAAAGTTCATCTTTTAAATATGGCAAGCATCGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * *
718827 CTCGTAATAGTCTCCATTCTTTTTAACATT-GGAAGCGAAAACACATTCCCTTCATCAGGCTACA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
718891 TGACATTGATGCTTTGGTGCCGT
454 TGACATTGATGCTTTGGTGTCGT
* *
718914 AAGAAAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * *
718979 TGAAAACTTATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCATAAACTTAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * *
719044 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCCATTTTTCTAAAG
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
** * * * * * * *
719109 TCTAAGTTCGTGCCTGTAGTGAGATAAACATGGATTCTAGTAAAGAGCTTTTTTCATTTTTTGAA
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * * * *
719174 TAGGTGCTATAAACA-ATTCTCCTCTTTAGGATAAATGATATTGATGATTTTAGTTTGCACGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* ** * * ** *
719238 ATCTTTTCTTTA-CATTATTTTCCTTAAAAAAAAAGTACATCCTTTAAACAAACCAAGCTTCGAT
324 ATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * * * * *
719302 TCTTATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCGAACACACATTACCTTTATTAGGATAC
388 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* *
719367 ATGAAATTGATGCTTTGGTGTCAT
453 ATGACATTGATGCTTTGGTGTCGT
* * *
719391 AAGAAAAGCTTTTCTTTCCACC-TTTTTCGATAAAATCAAAGTTTGTCTCTCAAATACGACAAAT
1 AAGAAAAGCTTTTCTTTCCACCGTTTTT-GATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * ** *
719455 ATGAATACTTATACTAATCCCCGTTCTTTTCAGGATTAGGCACCACAAATGTAGTCTTCTCATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * *
719520 GGATACATCATAATGATGTTTTGGTTTTGCGAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * * *
719585 CTAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTCTGATT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * * *
719650 AGGTACTACAAACACATTTTGCTCATTAGGATAAACGATATTGATGATTTTATTTTGCATGGAAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * *
719715 TCTTTTCTTTA-CCTTATTTTTCTAAAAATCAAAGTTAATCCTTTAAATGAGGCAAGCATCGATT
325 TCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * * *
719779 CTCATAACAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACCTTCCCTTCATTAGGCTGCA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* *
719844 AGATATTGATGCTTTGGTGTCGT
454 TGACATTGATGCTTTGGTGTCGT
* * * *
719867 AAGAAAAGCTTTTCTTTCCATCGTTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * * *
719932 AGAATACTGATAATAATCCCCGTTTTTTTCAAGATTAGGTACCATAAACATATTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * *
719997 GATACA-CA-ATTTGATGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATCATA-TTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* ** *
720060 CTAAATTCACGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGATT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * * * *
720125 TGGCACTATAAACACATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAA
* * * ** *
720190 ATCTTTTCTTTGCCATATTTTCCTTAAAATCAAAGTTCATCTTTTAAATTTGGCAATCATCGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
*
720255 CTCGTAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
*
720320 TGACATTGATGCTTTGGTGTCAT
454 TGACATTGATGCTTTGGTGTCGT
*
720343 AAGAAAAGCTTTTCTTTTCCACCATTTTTGATAGAAT---A----G---------TACGACAAAC
1 AAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* * * ** * *
720392 ATGAATACTCATACAAATCCCCATTCTTTTTAGGATTAGATAGCGTAAACATAGTCTTCTTATTA
65 ATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * *
720457 GGATACATCATATTGATGCTTTAGTTTCGCAAGAAAGGCTTTTTTTTCACACCAAATTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * * * *
720522 GTCTAAGTTCGTGCCTCTAATGAGATACATATAGA-TCTAGTAAAT-ATCTTTTTTCATTTTTTG
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTCATTTTGTG
*
720585 AATAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCATG
257 ATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATG
* * ** *
720648 GAAATCTTTTCTTTA-CGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTC
321 GAAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATC
* * * * * * * *
720712 GATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTCACTTTATTAGGA
385 GATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGA
* * *
720777 TACATGAAATTGATTCTTTGGTGTCAT
450 TACATGACATTGATGCTTTGGTGTCGT
* * ** * * *
720804 AAGAAAAGTTTTTCTTCCCACCGTTTCCGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
** * ** *
720869 TGAATACTCATACTAATCATCGTTCTTTTCAGGATTAGGCACCACAAACGCAGTCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * ** * *
720934 GATGCATCATATTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCTTACCAATTTTCGTAAAATC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
** * *
720999 TAAGTTCGTGAATCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTC-TTTCGGTCATT
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTT-TGTGATT
* ** * * *
721063 AGGCACTATAAACACATTCTCCTCAACAGGATAAGTGATATTGATGATTTTCTTTTGCATGAAAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * * *
721128 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGGAAGCCTTGATTC
325 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * * * * * * * *
721193 TCGTAACAGTCCCCATTCTTTTCATGATTTGGATGCGAAAACACATTCCCCTCATTAGGGTAAAT
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
*
721258 GACATTGATGCTTTGG-GGC-T
455 GACATTGATGCTTTGGTGTCGT
** *
721278 ACAAGAAAAGCTTTTCTTTTTACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAA
1 --AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAA
* * *
721343 CATGAATACTGATACTAATCCCCGTTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATT
64 CATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
* ** * * **
721408 CA-AATACATCATAAAGATGCTTTGGTTTTGCAAGAAAGGCTTTTCTCCCACCAATTTTTCAAAA
129 -AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAA
* * * * *
721472 GTCTATGTTCGTGCCTCAAATGAGACAAACATAGATTCTAGTAAAGATCTTCATTAATTTTGTGA
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* * * *
721537 TTAGGTACTGTAAACACATTCTGCTCAGTAGGATAAATGATATTGATGATTTTATTTTGCTTGGA
258 TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * * *
721602 AATCTTTTCTTTATCC-TATTTTTCTTAAAATCAAAGTTCATCTTTTAAACAATGCAAGCATCGA
323 AATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * * * *
721666 TTCTCATAACT-GTCTCCATTCGTTTCAAGATTGAGAAGCAAAAACACATTGCTTTCATTAGGAT
387 TTCTCATAA-TAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
*
721730 GCATGACATTGATGCTTTGGTGTCGT
451 ACATGACATTGATGCTTTGGTGTCGT
* *
721756 AAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
721821 AGAATACT--GA-TAA------------T-A--A-T---CCCCATAAACGTAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * *
721864 GATACA-CGACATTGATGCTTTGGTTTCGCATGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
131 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * * *
721928 CTAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTGGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
* * * *
721992 TAGGCACTATAAACACATTCTCCTC-TATAGGATAAATGATATTGATGATTTTTTTTTGTATGAA
259 TAGGTACTATAAACACATTCTCCTCAT-TAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * *
722056 AATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCCTTGAT
323 AATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* ** * * * * * * ** *
722121 TCTCGTAGCAGTCTCCATTCTTTTCATGATTTGGATGCCAAAACGCATTCCCTTCATTAGGGCAA
388 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* * *
722186 ATGACATTGATGCTTTGGGGTTGC
453 ATGACATTGATGCTTTGGTGTCGT
* *
722210 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTTTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* *** * *
722275 TGTAGACAC-CATA--AA-CATAG-TCTTCTC---ATT-CG-A--AT--AC--A----TC-----
66 TG-A-ATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
*
722315 ---ATA-AT------GATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
129 AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
* * * * * * **
722370 TCTAAGTTTGTACCTCAAATGGGACAAACAAGGATTCCAGTAAAGATCTTCGTTCATTTTGTGAT
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* *
722435 TAGGTACTATAAACACATTCTACTCATTAGGATAAATGATATTGACGATTTTATTTTGCATGGAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * *
722500 ATCTTTTCTT-TCCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * * * *
722564 CTCATAACAGTCTCAATTCTTCTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGCG
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* *
722629 TGACCTTGATGCTTTGGTGCCGT
454 TGACATTGATGCTTTGGTGTCGT
* *
722652 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATGAAGGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * ** *
722717 AGAATATTGATACTAATCCCTGTT-TTCTTCAGGATTAGGTTCCATAAACATAGTTTTCTTATTA
66 TGAATACTCATACTAATCCCCGTTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * *
722781 GGATACATCATATTGATGCTTTAGTTTCGCAAGAAAGGCTTTTTTTTCACACCAAATTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * * * *
722846 GTATAAGTTCGTGCCTCTAATGAGATACATATAGA-TCTAGTAAAT-ATCGTTT-TTCATTTTTT
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATC-TTTATTCATTTTGT
* *
722908 GAATAGGTACTGTAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCAT
256 GATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCAT
* * * ** *
722971 GGAAATCTTTTCTTTA-CGTTATTTTCCTTAAAATCATAGTTCATCCTTTAAACAAACCAAGCTT
320 GGAAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * * * * * *
723035 CGATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGAACACACATTCACTTTATTAGG
384 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGG
* * *
723100 ATACATGAAATTGATTCTTTGGTGTCAT
449 ATACATGACATTGATGCTTTGGTGTCGT
* ** * * *
723128 AAGAAAAGTTTTTCTTTCCACCGTTTCCGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * *
723193 TGAATACTCATACTAATCCTCGTTCTTTTCAGGATTAGGCACCACAAACGTAGTCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * *
723258 GATGCATCATATTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* ** *
723323 TAAATTCGTGAATCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTC-TTTTGGTCATT
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGATT
* ** * * *
723387 AGGCACTATAAACACATTCTCCTCAACAGGATAAGTGATATTGATGATTTTCTTTTGCATGAAAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * *
723452 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCCTTGATTC
325 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* ** * * * * * * ** *
723517 TCGTAGCAGTCTCCATTCTTTTCATGATTTGGATGCCAAAACGCATTCCCTTCATTAGGGCAAAT
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
* * *
723582 GACATTGATGCTTTGGGGTTGC
455 GACATTGATGCTTTGGTGTCGT
* *
723604 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTTTCTTAAATATGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* *** * *
723669 TGTAGACAC-CATA--AA-CATAG-TCTTCTC---ATT-CG-A--AT--AC--A----TC-----
66 TG-A-ATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
*
723709 ---ATA-AT------GATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
129 AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAG
* * * * * * **
723764 TCTAAGTTTGTACCTCAAATGGGACAAACAAGGATTCCAGTAAAGATCTTCGTTCATTTTGTGAT
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* *
723829 TAGGTACTATAAACACATTCTACTCATTAGGATAAATGATATTGACGATTTTATTTTGCATGGAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * * *
723894 ATCTTTTCTT-TCCCTATTTTTCTTAAAATCAAAGTTCATGCTTTAAATAAGGCAAGCATTGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * * * *
723958 CTCATAACAGTCTCAATTCTTCTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGCG
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* *
724023 TGACCTTGATGCTTTGGTGCCGT
454 TGACATTGATGCTTTGGTGTCGT
* *
724046 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATGAAGGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * **
724111 AGAATATTGACACTAATCCCTGTT-TTCTTCAGGATTAGGTTCCATAAACATAGTCTTCTTATTA
66 TGAATACTCATACTAATCCCCGTTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
* * * *
724175 GGATACATCATATTGATGCTTTAGTTTCGTAAGAAAGGCTTTTTTTTCACACCAAATTTTGTAAA
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAA
* * * * * *
724240 GTCTAAGTTCGTGCCTCTAATGAGATACA-ATAGA-TCTAGTAAAT-ATCTTTTTTCATTTTTTG
193 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTCATTTTGTG
* * *
724302 AATAGGTATTATAAACA-ATTCCCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCATG
257 ATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATG
* ** *
724365 GAAATCTTTTCTTTATG--TTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTT
321 GAAATCTTTTC-TTA-GCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * *** * * * **
724428 CGATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATTGAACATACATTCACTTTTTTAGG
384 CGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGG
*
724493 ATACATGAAATTGATGCTTTGGTGTCGT
449 ATACATGACATTGATGCTTTGGTGTCGT
* * * *
724521 AAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * *** *
724586 TGAACACTCATACTAATCCTCATGCTTTTCAGGATTAGGCACCACAAATGCAGTCTTCTCATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * * *
724651 GATACATCATATTGATGCTTTGGTTTCGTAGGAAAGGCCTTTGTCCTACCAATTTTCGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
*
724716 TAAGTTCGTGACC-CAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTGGTGATT
196 TAAGTTCGTG-CCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * * * *
724780 TGGCACTATAAACACATTCTCCTCATTAGGATGAACGATATTGATGATTTTCTTTTGCATGGAAA
260 AGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* *
724845 TCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATGGCAAGCATCGATTC
325 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * *
724910 TCTTAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCTTTCATTAGGATGCAT
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
724975 GACATTGATGCTTTGGTGTCGT
455 GACATTGATGCTTTGGTGTCGT
* * * *
724997 AAAAAAAGCTTTTCTTTCTACCATTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* ** * *
725062 TGAATACTCAAACTAATCCTTGTTCTTTTCAGGATTAGGCACCAT-AACGTAGTCTCCTCT-TTA
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCT-TATTA
* * *
725125 GGATACATCATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAATTTTTGTGAAGT
130 GGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * * * *
725190 CTAAGTTCATGACTCAAATGAGACAAACATGGATTCTAGTAATGATATTCATTC-TTTTAGTCAT
195 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGAT
** * * *
725254 TAGACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * * *
725319 ATCTTTTCTTTGCCCTATTTTTCTTACAATGAAAGTTCATCCTTTAAATAAGGCAAGCCA-CGAT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG-CATCGAT
* * * * * * * * *
725383 TCTCATAACAGTCTCCATTTTTTTTTCATGATTTGGATGCCAAAGCACATTCCCTTTATTAGGGT
388 TCTCATAATAGTCTCCA-TTCTTTTT-AAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
* * * *
725448 AAATGACATTGATGCTTTGGGGTTGC
451 ACATGACATTGATGCTTTGGTGTCGT
* * * * *
725474 AAAAAAAGCTTTT-TTTGCACCGTTTTTGATAGAATCAAAGTTTGACTCTTAAATATGATAAACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * ** *
725538 TGAATGCTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATAGACTTCACATTTG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* * * * *
725603 AATAGATCATAATGATGCTTTGGTTTTGCAAGAAAGGTTTTTTTCCCACCAATTTTTGTAAAGTC
131 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* *
725668 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTC---T-A-GATCTTCATTCATTTTGTGATCA
196 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * *
725728 GGTACTATAAACACATTCTGCTCATTAGGATAAATGATACTGATGATTTTATTTTGCAT-TAAAT
261 GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * *
725792 CTTTTCTTTA-TCTTATTTTTCTTAAAATCAAAGTTAATCCTTTAAATCAGGCAAGCATCGATTC
326 CTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * *
725856 TCATAACAGTCTCCATTCCTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGCAT
390 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
725921 GACATTGATGCTTTGGTGTCGT
455 GACATTGATGCTTTGGTGTCGT
* * * *
725943 AAGAAAAGCTTTTCTTTCCATCGTTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACA
1 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
* * * * * *
726008 GGAATACTGATA-TAATCCCCATTTTTTTCAAGATTAGGTACCATAAACATAGTCTTCTTATTAG
66 TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
* *
726072 GATACA-CGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCCCCAACTTTTT-TAAAG
131 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAA-TTTTTGTAAAG
* * * * * *
726135 TTTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCCAGTAATGATATATATTCATTTGGTGAT
194 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * ** *
726200 TTGGCACTATAAATTCATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAA
259 TAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * *
726265 ATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATT
324 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * *
726330 CTCGTAATAGTCTCCATTCTTTTTAAGATTCGGAAGTC-AAAACACAATCCCTTCATTAGGATAC
389 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAG-CAAAAACACATTCCCTTCATTAGGATAC
*
726394 ATGATATTGATGCTTTGGTGTCGT
453 ATGACATTGATGCTTTGGTGTCGT
* * * *
726418 AAGAAAAGCTTTTCTTTTCC-CCATTTTTGATAGAATCAAAGTTTATCTCTTAAATATGACACAC
1 AAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* *
726482 TTGAATACTCATACTAATCCCCATTCTTTT
65 ATGAATACTCATACTAATCCCCGTTCTTTT
726512 TAAGATACAT
Statistics
Matches: 25047, Mismatches: 4609, Indels: 2263
0.78 0.14 0.07
Matches are distributed among these distances:
440 10 0.00
441 23 0.00
442 899 0.04
443 679 0.03
444 171 0.01
445 16 0.00
448 15 0.00
449 12 0.00
450 11 0.00
451 3 0.00
452 22 0.00
453 614 0.02
454 968 0.04
455 351 0.01
456 118 0.00
457 257 0.01
458 21 0.00
459 13 0.00
460 71 0.00
461 661 0.03
462 217 0.01
463 106 0.00
464 163 0.01
465 13 0.00
466 166 0.01
467 197 0.01
468 84 0.00
469 223 0.01
470 88 0.00
471 78 0.00
472 98 0.00
473 94 0.00
474 739 0.03
475 4735 0.19
476 9288 0.37
477 2109 0.08
478 536 0.02
479 216 0.01
480 125 0.00
481 8 0.00
483 2 0.00
484 5 0.00
485 8 0.00
486 6 0.00
487 5 0.00
488 10 0.00
489 15 0.00
490 4 0.00
491 15 0.00
492 13 0.00
493 6 0.00
494 15 0.00
495 11 0.00
496 11 0.00
497 6 0.00
498 20 0.00
499 11 0.00
500 8 0.00
501 17 0.00
502 16 0.00
503 10 0.00
504 18 0.00
505 10 0.00
506 21 0.00
507 23 0.00
508 33 0.00
509 23 0.00
510 26 0.00
511 27 0.00
512 16 0.00
513 15 0.00
514 24 0.00
515 17 0.00
516 31 0.00
517 25 0.00
518 25 0.00
519 33 0.00
520 37 0.00
521 33 0.00
522 37 0.00
523 28 0.00
524 32 0.00
525 19 0.00
526 16 0.00
527 14 0.00
528 10 0.00
529 11 0.00
530 1 0.00
531 6 0.00
532 2 0.00
533 1 0.00
535 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (476 bp):
AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACA
TGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAG
GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
GGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
CTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCT
CATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATG
ACATTGATGCTTTGGTGTCGT
Found at i:697790 original size:159 final size:159
Alignment explanation
Indices: 695245--697830 Score: 823
Period size: 159 Copynumber: 16.3 Consensus size: 159
695235 ACGTTTGGGG
* * * * *
695245 TTGCAAGAAAAGCTATT-TTTGCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACA
1 TTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAGTTCGTCTCTTAAATATGACA
* * * * * * * *
695309 AACATGAATACTCATACTAATC-CCTGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTC
66 AACATGAATTCTCATACTAATCTCC-ATTCTTTTTAAGATTAGGCAGCATAAACACATTCTTCTT
* * * * *
695373 ATTTGAATAGATCATAATGATGCTTTGGTT
130 ATTAGGATACATGATATTGATGCTTTGGTT
* * * * * *
695403 TTGCAAGAAAGGCATTT-TTCCCACCAATTTTTG-TAAAGTCTAAGTTCGTGC-CTCAAATGA-G
1 TTGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAAAATCAAAGTTCGT-CTCTTAAAT-ATG
* * * * * ** *
695464 ACAAACATGGATTCT-AGTA-AAGATCTTCGTTCATTTTGTGATTAGGTA-CTATAAACACATTC
63 ACAAACATGAATTCTCA-TACTA-ATCTCCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTC
* * * * *
695526 TGCTCATTAGGATAAATGATATTGATGATTTTAG-T
125 TTCTTATTAGGATACATGATATTGATG-CTTTGGTT
* * * ** ** *
695561 TTGCATGAAAATCTTTTCCTT--ACCTTATTTTTCTTAAAATCAAAGTTAATC-CTTTAAATA-A
1 TTGCAAGAAAAGCTTTTCTTTCCACC--ATTTTTGATAAAATCAAAGTTCGTCTC-TTAAATATG
* * * * * *
695622 AGCAAGCATCG-ATTCTCGTAAC-AGTCTCCATTCTTTTCAAGATT-GAGAAGCAAAAACACATT
63 A-CAAACAT-GAATTCTCAT-ACTAATCTCCATTCTTTTTAAGATTAG-GCAGCATAAACACATT
* * *
695684 C-CCTTCATTAGGATGCATGATATTGATGCTTTGGTG
124 CTTCTT-ATTAGGATACATGATATTGATGCTTTGGTT
* * * * * ** * * *
695720 TCGTAAGAAAAGCTTTTCTTTCCATCGTTTGTGGCAGAATCAAAGTTTGTCTCTTAAATACGACA
1 TTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAGTTCGTCTCTTAAATATGACA
* * * * * ** * * * * * * *
695785 CACAAGAATACTGATAATTGTCCCCGTT-TTTTTCACGATTAGGTACCATAAACATAGTCTTCTT
66 AACATGAATTCTCATACTAATCTCCATTCTTTTT-AAGATTAGGCAGCATAAACACATTCTTCTT
*
695849 ATTAGGATACATGAT-TTGATGCTTTAGTT
130 ATTAGGATACATGATATTGATGCTTTGGTT
* * * * * *
695878 TTGCAAGAAAGGC-TTTCTTCCCCCCAATTTTT-ATAAAGTCTAAA-TTCG-CGCCTCAAATGA-
1 TTGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAAAATC-AAAGTTCGTC-TCTTAAAT-AT
* * * ** * * * *
695938 GACAAACATGGATTCT-AGTAATGATCTTTATTC-ATTCACTGATTTGGCA-CTATAAACACATT
62 GACAAACATGAATTCTCA-TACTAATCTCCATTCTTTTTA-AGATTAGGCAGC-ATAAACACATT
* * **
696000 C-TCTTCATTAGGATAAATGATATTGATGATTTTCTT
124 CTTCTT-ATTAGGATACATGATATTGATGCTTTGGTT
* * * ** * *
696036 TTACAATGGAAATCTTTTC--T-CAGCC-TTATTCTCCTTAAAATCAAAGTTCATCTTTTAAATA
1 TTGCAA-GAAAAGCTTTTCTTTCCA-CCATT-TT-T-GATAAAATCAAAGTTCGTCTCTTAAATA
** * * * * * * *
696097 TGGGAATCATCG-ATTCTCATAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAAACACATTC
61 TGACAAACAT-GAATTCTCATACTAATCTCCATTCTTTTTAAGATTAGGCAGCATAAACACATTC
* * * * *
696161 -CCTACATTAGGATACATGACATTAATGCTTTGGTC
125 TTCT-TATTAGGATACATGATATTGATGCTTTGGTT
* * ** * * *
696196 TCGTAAGAAAAGCTTTTCTTTTCCAGTATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGAC
1 TTGCAAGAAAAGCTTTTC-TTTCCACCATTTTTGATAAAATCAAAGTTCGTCTCTTAAATATGAC
* * * * * * * * *
696261 AAACAAGAATACTCATACTAATCCCCATTCTTTTTAGGGTTAGACAGCGTAAACATAGTCTTCTT
65 AAACATGAATTCTCATACTAATCTCCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTTCTT
* * *
696326 ATTATGATACATCACATTGATGCTTTGGTT
130 ATTAGGATACATGATATTGATGCTTTGGTT
* * * *
696356 TCGCAAGAAAGGCTTTT-TTTCACACCAATTTTTG-TAAAGTCTAAGTTCGTGC-CTCT--A-AT
1 TTGCAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGATAAAATCAAAGTTCGT-CTCT-TAAATAT
* * * * * *** * * * *
696415 GAGATACGTATGGATTCT-AGTA-AATATTTTTTTTCATTTTATGAATAGGTA-CTATAAACA-A
62 GACAAAC--ATGAATTCTCA-TACTA-ATCTCCATTCTTTTTAAGATTAGGCAGC-ATAAACACA
* * * * **
696476 TTCTCCTCT-TCAGGATAAATGATATTGATGATTTTATT
122 TTCTTCT-TATTAGGATACATGATATTGATGCTTTGGTT
* * * * *** *** * * *
696514 TTGCATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATC-CTTTAAACA-AAC
1 TTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAGTTCGTCTC-TTAAATATGA-
* * * ** * * * * * * *
696577 CAAGCTTCG-ATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCGA-ACACACATTC-C
64 CAAACAT-GAATTCTCATACTAATCTCCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTT
* *
696639 CTTTATTAGGATACATGAAATTGATGCTTTGGTG
127 C-TTATTAGGATACATGATATTGATGCTTTGGTT
*** * * * * * **
696673 TCATAAGAGAGGCTTTCCTTTCCACCATTTTTGATAAAATCAAAGTTTGTCTCTCAAATACAACA
1 TTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAGTTCGTCTCTTAAATATGACA
* * * * * * * *** * *
696738 AACATGAATACTCATACTAATCCCCGTT-TTTTCAGGATTAGGCACCACAAATGTAGTCTTCTCA
66 AACATGAATTCTCATACTAATCTCCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTTCTTA
* *
696802 TTAGGATACATCATAATGATGCTTTGGTT
131 TTAGGATACATGATATTGATGCTTTGGTT
* * ** * * * * * *
696831 TTACGAGAAGGGCTTTT-TTCCCACCAATTTTTG-TAAAGTCTAAGTTCGTGC-CTCAAATGTGG
1 TTGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAAAATCAAAGTTCGT-CTCTTAAATATGA
* * * *** * * * * * *
696893 CAAACATGGATTCTCGTA-AAGATCTTTGTTCATTTTATGATTAGGTA-CTACAAACACAATCTG
64 CAAACATGAATTCTCATACTA-ATCTCCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTT
* * * * **
696956 CTCATTAGGATAAACGATATTGATGATTTTATT
127 CTTATTAGGATACATGATATTGATGCTTTGGTT
* * * * *** * * *
696989 TTGCATGGAAATCTTTTCTTTACC-CTATTTTCCTTAAAATCAAAGTTCATC-CTTTAAATAAGG
1 TTGCAAGAAAAGCTTTTCTTT-CCACCATTTTTGATAAAATCAAAGTTCGTCTC-TTAAATATGA
* * * * * *
697052 CAAGCATCG-ATTTTCATAAC-AGTCTCCATT-TTTTTCAAGATT-GAGAAGCAAAAACATATTC
64 CAAACAT-GAATTCTCAT-ACTAATCTCCATTCTTTTT-AAGATTAG-GCAGCATAAACACATT-
* * * * * * *
697113 CTT-TCATCACGATGCAAGACATTGATGCTTTGGTG
124 CTTCTTATTAGGATACATGATATTGATGCTTTGGTT
* * * * * * * *
697148 TCGTAAGAAAATCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTATATACGACA
1 TTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAGTTCGTCTCTTAAATATGACA
* * * * * * * * * * * * *
697213 AACAAGAATACTGATAATAAT-ACCTTTTTTTTTCAGGATTAGGTACCATAAACATAGTCTTCCT
66 AACATGAATTCTCATACTAATCTCCATTCTTTTT-AAGATTAGGCAGCATAAACACATTCTTCTT
* **
697277 ATTAGGATACACGGCATTGATGCTTTGGTT
130 ATTAGGATACATGATATTGATGCTTTGGTT
* * * * * * * * *
697307 TCGCAAGGAAGGC-TTTCTTCCCCCCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCAATTGA-G
1 TTGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAAAATCAAAGTTCGT-CTCTTAAAT-ATG
* * ** * *** *
697368 ACAAACATGGATTCT-AGTA-AAGATCTTTATTCATTTGGTGATTTGGC-GCTATAAACACATTC
63 ACAAACATGAATTCTCA-TACTA-ATCTCCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTC
* * * * * *
697430 TCCTCATGAGGATAAATGATATTGATGATTT-TTT
125 TTCTTATTAGGATACATGATATTGATGCTTTGGTT
* * * * *** * * *
697464 TTGTATG-GAAGTCTTTTCTTTGCC-CTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGG
1 TTGCAAGAAAAG-CTTTTCTTT-CCACCATTTTTGATAAAATCAAAGTTCGTCTCTTAAATATGA
* * * * * * * * *
697527 CAAGCATTG-ATTCTCATAAC-AGTCTCCATCCTTTTTAAGATTGGGAAGCAAAAACGCACTC-G
64 CAAACA-TGAATTCTCAT-ACTAATCTCCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTT
* *
697589 CTTCATTCA-GATACATGACATTGATGCTTTGGTG
127 CTT-ATT-AGGATACATGATATTGATGCTTTGGTT
* * *
697623 TTGAAAGAAAAGCTTTTCTTTCCACCATTTTTGATATAATCAAAGTTTGTCTCTTAAATATGACA
1 TTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAGTTCGTCTCTTAAATATGACA
* * * * * * *
697688 AACAAGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCATAAACATAGTCTTCTTA
66 AACATGAATTCTCATACTAATCTCCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTTCTTA
*
697753 TTAGGATACATCATATTGATGCTTTGGTT
131 TTAGGATACATGATATTGATGCTTTGGTT
* * * * *
697782 TTGCAAGAAAGGCTTTTTTTTCACTCCAATTTTTG-TAAAGTCTAAGTTC
1 TTGCAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGATAAAATCAAAGTTC
697831 ATGCCTTTAA
Statistics
Matches: 1724, Mismatches: 561, Indels: 284
0.67 0.22 0.11
Matches are distributed among these distances:
156 13 0.01
157 167 0.10
158 591 0.34
159 680 0.39
160 247 0.14
161 19 0.01
162 3 0.00
163 4 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (159 bp):
TTGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAGTTCGTCTCTTAAATATGACA
AACATGAATTCTCATACTAATCTCCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTTCTTA
TTAGGATACATGATATTGATGCTTTGGTT
Found at i:724572 original size:475 final size:474
Alignment explanation
Indices: 723675--726502 Score: 3423
Period size: 475 Copynumber: 6.0 Consensus size: 474
723665 AACATGTAGA
* * * *
723675 CACCATAAACATAGTCTTCTCATTCGAATACATCATAATGATGCTTTGGTTTTGCAAGAAAGGCT
1 CACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCT
* * * * *
723740 TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTTGTACCTCAAATGGGACAAACAAGGATTCCAGT
66 TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * * *
723805 AAAGATCTTCGTTCATTTTGTGATTAGGTACTATAAACACATTCTACTCATTAGGATAAATGATA
131 AATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* * * *
723870 TTGACGATTTTATTTTGCATGGAAATCTTTTCTTTCCCTATTTTTCTTAAAATCAAAGTTCATGC
196 TTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCTATTTTCCTTAAAATCAAAGTTCATCC
* * *
723935 TTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCAATT-CTTCTCAAGATTGAGAAGCAAAA
261 TTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCCTT-TTAAGATTGAGAAGCAAAA
* * * *
723999 ACACATTCCCTTCATTAGGATGCGTGACCTTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTTTC
325 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTC
* * * * * * *
724064 CACCGTTTTTGATAGAATGAAGGTTTGTCTCTTAAATACGACAAACAAGAATATTGACACTAATC
390 CACCGTTTTTGATAGAATCAAAGTTTATCTCTTAAATACGACAAACATGAATACTCATACTAATC
724129 CCTGTTTTCTTCAGGATTAGG
455 CCTGTTTT-TTCAGGATTAGG
** * * *
724150 TTCCATAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTAGTTTCGTAAGAAAGGCT
1 CACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-
* * * * * *
724215 TTTTTTTCACACCAAATTTTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATACA-ATAGA-TCTA
65 -TTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
** * * * * *
724278 GTAAAT-ATCTTTTTTCATTTTTTGAATAGGTATTATAAACA-ATTCCCCTC-TTCAGGATAAAT
129 GT-AATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AGGATAAAT
**
724340 GATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTATGTTATTTTCCTTAAAATCAAAGTT
192 GATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTA-CCTATTTTCCTTAAAATCAAAGTT
* ** * * * * * **
724405 CATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATT
256 CATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCCTTTTAAGATTGAGAAGC
* * * * ** *
724470 GAACATACATTCACTTTTTTAGGATACATGAAATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTC
321 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTC
* * * *
724535 TTTCCACCGTTTTCGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACATGAACACTCATACT
386 TTTCCACCGTTTTTGATAGAATCAAAGTTTATCTCTTAAATACGACAAACATGAATACTCATACT
*
724600 AATCCTCATG-CTTTTCAGGATTAGG
451 AATCC-C-TGTTTTTTCAGGATTAGG
* *** * * *
724625 CACCACAAATGCAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGTAGGAAAGGCC
1 CACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCT
* * *
724690 TTTGTCCTACCAATTTTCGTAAAGTCTAAGTTCGTGACC-CAAATGAGACAAACATGGATTCTAG
66 TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTG-CCTCAAATGAGACAAACATGGATTCTAG
* * * * *
724754 TAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGAACGAT
130 TAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
*
724819 ATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTAGCCCTATTTTCCTTAAAATCAAAGTTCA
195 ATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTA--CCTATTTTCCTTAAAATCAAAGTTCA
* * *
724883 TCCTTTAAATATGGCAAGCATCGATTCTCTTAATAGTCTCCATT-CTTTTCAAGATTGAGAAGCA
258 TCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCCTTTT-AAGATTGAGAAGCA
* * *
724947 AAAACACATTCCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGTAAAAAAAGCTTTTCT
322 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCT
* * * * *
725012 TTCTACCATTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCAAACTA
387 TTCCACCGTTTTTGATAGAATCAAAGTTTATCTCTTAAATACGACAAACATGAATACTCATACTA
*
725077 ATCCTTGTTCTTTTCAGGATTAGG
452 ATCCCTGTT-TTTTCAGGATTAGG
* * * *
725101 CACCAT-AACGTAGTCTCCTCTTTAGGATACATCATATTGACGCTTTGGTTTCGCAAGAAAGGCT
1 CACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCT
* * * *
725165 TTTTTCCTACCAATTTTTGTGAAGTCTAAGTTCATGACTCAAATGAGACAAACATGGATTCTAGT
66 TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * * *
725230 AATGATATTCATTC-TTTTAGTCATTAGACACTATAAACACATTCTCCTCAATAGGATAAATGAT
131 AATGATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
* * * * * *
725294 ATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTTCTTACAATGAAAGTTCAT
195 ATTGATGATTTTATTTTGCATGGAAATCTTTTCTTT-ACCTATTTTCCTTAAAATCAAAGTTCAT
** * *
725359 CCTTTAAATAAGGCAAGCCA-CGATTCTCATAACAGTCTCCATTTTTTTTTCATGATTTG-GATG
259 CCTTTAAATAAGGCAAG-CATCGATTCTCATAACAGTCTCCA-TTCCTTTT-AAGA-TTGAGAAG
* * * * * * * * *
725422 CCAAAGCACATTCCCTTTATTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAAAAAAGCTTTT
320 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTT
* * * *
725487 -TTTGCACCGTTTTTGATAGAATCAAAGTTTGA-CTCTTAAATATGATAAACATGAATGCTCATA
385 CTTTCCACCGTTTTTGATAGAATCAAAGTTT-ATCTCTTAAATACGACAAACATGAATACTCATA
** * *
725550 CTAATCCCCATTCTTTTCAAGATTAGA
449 CTAATCCCTGTT-TTTTCAGGATTAGG
* * * * * * * *
725577 CACCATAAACATAGACTTCACATTTGAATAGATCATAATGATGCTTTGGTTTTGCAAGAAAGGTT
1 CACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCT
725642 TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTC---T
66 TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * *
725704 -A-GATCTTCATTCATTTTGTGATCAGGTACTATAAACACATTCTGCTCATTAGGATAAATGATA
131 AATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* * * * *
725767 CTGATGATTTTATTTTGCAT-TAAATCTTTTCTTTATCTTATTTTTCTTAAAATCAAAGTTAATC
196 TTGATGATTTTATTTTGCATGGAAATCTTTTCTTTA-CCTATTTTCCTTAAAATCAAAGTTCATC
* *
725831 CTTTAAATCAGGCAAGCATCGATTCTCATAACAGTCTCCATTCCTTTCAAGATTGAGAAGCAAAA
260 CTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCCTTTTAAGATTGAGAAGCAAAA
*
725896 ACACATTCCCTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTC
325 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTC
* * * * * * *
725961 CATCGTTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACAGGAATACTGATA-TAATC
390 CACCGTTTTTGATAGAATCAAAGTTTATCTCTTAAATACGACAAACATGAATACTCATACTAAT-
*
726025 CCCAT-TTTTTTCAAGATTAGG
454 CCC-TGTTTTTTCAGGATTAGG
* * *
726046 TACCATAAACATAGTCTTCTTATTAGGATACA-CGATATTGATGCTTTGGTTTTGCAAGAAAGGC
1 CACCATAAACATAGTCTTCTCATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGC
* * * *
726110 TTTTTTCCCCCCAACTTTTT-TAAAGTTTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCCA
65 TTTTTTCCCACCAA-TTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* * * **
726174 GTAATGATATAT-ATTCATTTGGTGATTTGGCACTATAAATTCATTCTCCTCATTAGGATAAATG
129 GTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
*
726238 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTAGCCCTATTTTCCTTAAAATCAAAGTT
193 ATATTGATGATTTTATTTTGCATGGAAATCTTTTCTTTA--CCTATTTTCCTTAAAATCAAAGTT
* * * * *
726302 CATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATTCG-GAAG
256 CATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCCTTTTAAGATT-GAGAAG
* *
726366 TC-AAAACACAATCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTCGTAAGAAAAGCTTT
320 -CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTT
* * * *
726430 TCTTTTCC-CCATTTTTGATAGAATCAAAGTTTATCTCTTAAATATGACACACTTGAATACTCAT
384 TC-TTTCCACCGTTTTTGATAGAATCAAAGTTTATCTCTTAAATACGACAAACATGAATACTCAT
726494 ACTAATCCC
448 ACTAATCCC
726503 CATTCTTTTT
Statistics
Matches: 2004, Mismatches: 299, Indels: 100
0.83 0.12 0.04
Matches are distributed among these distances:
468 4 0.00
469 184 0.09
470 68 0.03
471 73 0.04
472 69 0.03
473 49 0.02
474 143 0.07
475 829 0.41
476 364 0.18
477 218 0.11
478 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (474 bp):
CACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCT
TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
AATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
TTGATGATTTTATTTTGCATGGAAATCTTTTCTTTACCTATTTTCCTTAAAATCAAAGTTCATCC
TTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCCTTTTAAGATTGAGAAGCAAAAA
CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCC
ACCGTTTTTGATAGAATCAAAGTTTATCTCTTAAATACGACAAACATGAATACTCATACTAATCC
CTGTTTTTTCAGGATTAGG
Found at i:727417 original size:476 final size:475
Alignment explanation
Indices: 726515--738667 Score: 14465
Period size: 476 Copynumber: 25.5 Consensus size: 475
726505 TTCTTTTTAA
* *
726515 GATACATCATATTGATGTTTTGGTTTCGCAAGAAAGGCTTTTTTTCACACCAATTTTTGTAAAGT
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTTCCCACCAATTTTTGTAAAGT
* * * * * *
726580 CTAAGTTCGTGCCTCTATTGAGATAAACATGGATTCTAGTAAAGATCTTTTTTCATTTTGTGAAT
65 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * * *
726645 AGGTACTATAAACA-GTTCTCCTC-TTCAAGATAAATGATATTGATGATTTTATTTTGCGTGGAA
130 AGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGAA
* * * ** * *
726708 ATCTTTTGTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAGGCTTCGATT
194 ATCTTTT-CTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * * *
726773 CTCATAATAGCCTCCATTCTTTTTAAGATTGGGAAGCGAACACACTTTCCCTTTATTAGGATACA
258 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * * *
726838 TGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGT
323 TGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGT
* * * * **
726903 TTATCTATTAAATATGACAAACTTGAATACTCATACTAATTTCCGTTCTTTTCAGGATTAGGCAC
388 TTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCAC
*
726968 CATAAATGTAGTCTTCTCATTAG
453 CATAAACGTAGTCTTCTCATTAG
* * * * ** *
726991 GATACATCATATTAACGCTTTGGTTTTGCAGGAAAGGCTTTTTTCATACCAATTTTTATAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* ** * * * *
727056 TAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGCGATGATTTTTATACATTTGGTGATTT
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * * * *
727121 GGCACTATAAACACATTTTCCTCATTAGGATGAATGATATTGATGATTTTCTTTTGTAGGGAAAT
131 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * * *
727186 CTTTTCTTAGCCCTACTTTCCTTAAAACCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCT
196 CTTTTCTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCT
* * * * *
727251 CGTAATAGTCTCCATTCTTTTTAACATTGGGAAGCGAAAACACATTCCCTTCATTAGGCTACATC
260 CATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATG
* *
727316 ACATTGATGCTTTGGTGCCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
325 ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTT
* * * *
727381 GTCTCTTAAATACGACAAACATGAAAACTTATACTAATCCCCGTTCTTTTTAGGATTAGGCAGCA
390 GTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCA
* *
727446 TAAACTTAGTCTTCTTATTAG
455 TAAACGTAGTCTTCTCATTAG
* * *
727467 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCCATTTTTGTACAG
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
* ** * * * * *
727532 TCTAAGTTCGTGCGTGTAGTGAGATAAACATGGATTCTAGTGAA-GAACTTTTTTCATTTTTTGA
64 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTCATTTTGTGA
* ** *
727596 ATAGGTGCTATAAACA-ATTCTCCTCTTTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
128 TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * * ** *
727660 AATCTTTTCTTTACGTTATTTTCCTTAAAA-AAAAGTACATCCTTTAAACAAACCAAGCTTCGAT
193 AATCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * * * *
727724 TCTTATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCGAACACACATTCCCTTTATTAGGATAC
257 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* * * * *
727789 ATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTCGATAAAATCAAAG
322 ATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAG
* *
727854 TTTGTCTCTCAAATACGACAAACATGAATACTCATACTAATCCTCGTTCTTTTCAGGATTAGGCA
387 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCA
* *
727919 CCACAAATGTAGTCTTCTCATTAG
452 CCATAAACGTAGTCTTCTCATTAG
* * *
727943 GATACATCATAATGATGCTTTGGTTTTGCGAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * *
728008 TAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAAAGATCTTTGTTCATTTTCTGATTA
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * * * * *
728073 GGTACTACAAACACAATCTGCTCATTAGGATAAACGATCTTGATGATTTTATTTTGCATGGAAAT
131 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * *
728138 CTTTTCTTTACCTTATTTTTCTTAAAATCAAAGCTAATCCTTTAAATGAGGCAAGCATCGATTCT
196 CTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCT
* * * *
728203 CATAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCCTTCATTAGGATGCAAG
260 CATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATG
* * * **
728268 ATATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCATCGTTTGTGGCAGAATCAAAGTTT
325 ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTT
* * * * * * * * *
728333 GTCTCTTAAATACGACACATAAGAATACTGATAATAATCCCTGTTTTTTTCAAGATTAGGTACCA
390 GTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCA
* *
728398 TAAACATA-TACTTCTTATTAG
455 TAAACGTAGT-CTTCTCATTAG
* * * *
728419 GATACA-CA-ATTTGATGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
1 GATACATCATA-TTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* *
728482 CTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGATT
65 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * *
728547 TGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTACAATGGAA
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAA
* * * *
728612 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAATCATCGATT
194 ATCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
** **
728677 CTTGTAATAGTCTTTATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
258 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * * *
728742 TGACATTGACGCTTTGGTGTCATAAGAAAAGCCTTTCTTTTCCACCATTTTTGATAGAATCAAAG
323 TGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAG
* * *
728807 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGACA
387 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCA
* * * *
728872 GCGTAAACATAGTCTTCTTATTAG
452 CCATAAACGTAGTCTTCTCATTAG
* * *
728896 GATACATCATATTGATGCTTTAGTTTCGCAAGAAAGGCTTTTTTTTCACACCAAATTTTGTAAAG
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
* * * * * * * *
728961 TTTAAGTTCGTGCCTCTAATGAGATACATATAGA-TCTAGTAAAT-ATCTTTTTTCATTTTTTGA
64 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTCATTTTGTGA
* * * *
729024 ATAGGTACTATAAACA-AGTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCGTGG
128 TTAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGG
* * * ** *
729087 AAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCATTAAACAAACCAAGCTTCGA
192 AAATCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * * *** * * *
729152 TTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATTGAATACACATTCACTTTATTAGGATA
256 TTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATA
* * * * * *
729217 CATGAAATTGATTCTTTGGTGTCATAAGAAAAGTTTTTCTTTCCACCGTTTTCGATAAAATCAAA
321 CATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAA
* * * * *
729282 GTTTATCTCTTAAAAACGACAAACATGAATACTCACACTAATCCTCGTTCTTTTCAGGATTAGCC
386 GTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGC
* *
729347 ACCACAAACGCAGTCTTCTCATTAG
451 ACCATAAACGTAGTCTTCTCATTAG
* * * *
729372 GATACATCATATTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTTTCGTAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* ** * *
729437 TAAGTTTGTGAATCAAATGAGACAAACATGGATTCTAGTGAA-GATCTTTGTTCATTTTCTGATT
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTTATTCATTTTGTGATT
* * * * * **
729501 AGGTACTACAAACACAATCTGCTCTTTAGGATAAACAATATTGATGATTTTATTTTGCATGGAAA
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
*
729566 TCTTTTCTTTACC-TATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
195 TCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
** * * * * * *
729630 TCATACCAGTCTCCATT-TTTTCCAAGATTGAGACGCAAAAACATATTCCTTTCATTAGGATGCA
259 TCATAATAGTCTCCATTCTTTT-TAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * * * *
729694 AGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCGGTAAAATCAAAGT
323 TGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGT
* * * * * *
729759 TTATCTCTTAAAAATGACAAACATGAATACTCATACTAATCCTCATTCTTTTCAGGATTAGGAAC
388 TTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCAC
* * * *
729824 CACAAATGCAGTCTTCTCGTTAG
453 CATAAACGTAGTCTTCTCATTAG
* * * *
729847 GATACATCATATTGATGCTTTGGTTTTGCAGGAAAGGCTTTTTTCCTACCAATTTTCGTAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * * *
729912 TAAGTTTGTGACTCAAATGAGACAAAGATGGATTCTAGTAATGATCTTTATTCATTTAGTGATTT
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * *
729977 GGCACTATAAACACATTCTCCTCATTAGGATAAATGTTATTGATGATTTTCTTTTACAATGGAAA
131 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAAA
* *
730042 TCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCAT-CTATTAAATATGGCAAGCATCAATT
195 TCTTTTCTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCT-TTAAATAAGGCAAGCATCGATT
** *
730106 CTCGCAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACAAATTCCCTTCATTAGGATACA
258 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * *
730171 TGACATTGATGCTTTGATGTCGTAAGAAAAGCTTTTTTTTTTCCACCATTTTTGATAGAATCAAA
323 TGACATTGATGCTTTGGTGTCGTAAGAAAAGC--TTTTCTTTCCACCGTTTTTGATAGAATCAAA
* * * * * *
730236 GTTTGTCTCTTAAATACGATAAACATGAATACTTATTCTAATCCCCGTTCTTTTTAGGATTCGAC
386 GTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGC
* * * * * *
730301 AGCGTCAACATAGTCTTTTTATTAG
451 ACCATAAACGTAGTCTTCTCATTAG
* *
730326 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCCATTTTTGTAAAG
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
* * * * * * * * * *
730391 TCTAAGTTCTTGCCTCTAGTGAGATACATATGGATTCTAGTAAAGATCTTTTTTCATTTTTTGAA
64 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * *
730456 TATGTACTATAAATA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCATGGA
129 TAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGA
* ** *
730519 AATCTTTTCTT-CCTGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGA
193 AATCTTTTCTTACC--TTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * * * *** * * * **
730583 TTCTCATAATAGCCCCCAGTCCTTTTAAGATTGGGAATTGAACATACATTCACTTTTTTAGGATA
256 TTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATA
* * *
730648 CATGAAATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAA
321 CATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAA
* * * * * * * * *
730713 GTTTATCTCTTAAAAACAACAAACATGAACACACATACTAATCCTCATGCTTTTCAAGATTAGGC
386 GTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGC
* * * *
730778 ACCACAAATGCAGTCTTCTCTTTAG
451 ACCATAAACGTAGTCTTCTCATTAG
* * * * *
730803 GATACATCATATTGATGCTTTGGTTTCGTAGGAAAGGCCTTTTTCCTACCAATTTTCGTAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
*
730868 TAAGTTCGTGACC-CAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTGGTGATT
66 TAAGTTCGTG-CCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * * * * *
730932 TGGCACTATAAACACATTCTCCTTATTAGGATGAACGATATTGATGATTTTCTTTTGCACGGAAA
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * *
730997 TCTTCTCCTAGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATGGCAAGCATCGATTC
195 TCTTTTCTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * *
731062 TCTTAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCTTTCATTAGGATGCAT
259 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
* *
731127 GACATTGATGCTTTGGGGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATCAAAGTT
324 GACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTT
*
731192 TGTCTCTTAAATACGACAAACATGAATACTCAAACTAATCCCCGTTCTTTTCAGGATTAGGCACC
389 TGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACC
* *
731257 AT-AACGTAGTCTCCTCTTTAG
454 ATAAACGTAGTCTTCTCATTAG
* * * *
731278 GATACATCATATTGACGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTACCAATTTTTGTGAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * * * * *
731343 TAAGTTCATGACTCAAATGAGACAAACATGGAATCTAGTAATGATATTCATTC-TTTTGGTCAGT
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGATT
* * * *
731407 AGACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * * *
731472 TCTTTTCTTTGCCCTATTTTTCTTACAATGAAAGTTCATCCTTTAAATAAGGCAAGCCA-CGATT
195 TCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG-CATCGATT
* * * * * * * *
731536 CTCATAACAGTCTCCAGTTTTTTTTCCATGATTTGGATGCCAAAACACATTCCCTTTATTAGGGT
258 CTCATAATAGTCTCCA-TTCTTTTT--AAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGAT
* * * * *
731601 AAATGACATTGATGCTTCGCG-GTTGTAAAAAAAGCTTTT-TTTGCACCGTTTTTGATAGAATCA
320 ACATGACATTGATGCTTTG-GTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCA
* * *
731664 AAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAGTCCCCGTTCTTTTCAAGATTAG
384 AAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAG
* * **
731729 ACACCATAAACATAGTCTTCTCATTTT
449 GCACCATAAACGTAGTCTTCTCATTAG
* * * * * * *
731756 AATAGATGATAATGATGCTTTGGTTTTGCAAGAAAGGTTTTTTTCCCACCAATTTTTTTAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * *
731821 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATCA
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * *
731886 GGTACTATAAACACATTCTGCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGAAAAT
131 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * *
731951 CTTTTCTTTATCTTATTTTTCTTAAAATCAAAGTTAATCCTTTAAATAAGGCAAGCATCGATTCT
196 CTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCT
* * * * **
732016 CATAACAGTCTCCATTCTTTTCAAGAGTGAGAAGCAAAAACACATTCCCTTCATTAGGAGGCATG
260 CATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATG
* * * *
732081 ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCATCATTTGTGACAGAATCAAAGTTT
325 ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTT
* * * * * * * *
732146 GTCTCTTAAATACGACACACAGGAATACTGATAATAATCCCCATTTTTTTCAAGATTAGGTACCA
390 GTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCA
** *
732211 TAAATATAGTCTTCTTATTAG
455 TAAACGTAGTCTTCTCATTAG
* * * * *
732232 GATACA-CGAT-TTGAGGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTATAAAGT
1 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * *
732295 CTAAATTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTAGTGATT
65 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * * *
732360 TGGCACTATAAACACATTCTCCTCATTAGGATAAATGTTATTGATGATTTTCTTTTACAATGGAA
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC-ATGGAA
* * *
732425 ATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAGGCATCGATT
194 ATCTTTTCTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* *
732490 CTCGTAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
258 CTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* *
732555 TGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTTCCACCATTTTTGATAAAATCAAAG
323 TGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAG
* * * *
732620 TTTGTCTCTTAAATATGACAAATATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGACA
387 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCA
* * * ** *
732685 GCGTCAATATAGTCTTCTTATTAG
452 CCATAAACGTAGTCTTCTCATTAG
* *
732709 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCCATTTTTGTAAAG
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
* * * * * * * * *
732774 TCTAAGTTCGTGCCTCTAATGAGATACATATGGATTCCAGTAAAGATCTTTTTTCATTTTTTGAA
64 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* **
732839 TAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCGGGGA
129 TAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * * ** *
732902 AATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTTATCCTTTAAACAAACCAAGCTTCGAT
193 AATCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * * * * **
732967 TCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCAAACACACATTCACTTTTTTAGGATAC
257 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* * *
733032 ATGAAATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAG
322 ATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAG
* * ** * *
733097 TTTATCTCTTAAAAACGACAAACATGAATACAAATACTAATCCTCATTCTTTTCAGGATTAGGCA
387 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCA
* * *
733162 CCACAAATGCAGTCTTCTCATTAG
452 CCATAAACGTAGTCTTCTCATTAG
* * * *
733186 GATACATAATATTGATGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTACCAATTTTCGTAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * *
733251 TAAGTTTGTGACTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTGGTGATTT
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * *
733316 GGCACTATAAACACATTCTCCTCATTAGGATGAACGATATTGATGATTTTCTTTTGCATGGAAAT
131 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * *
733381 CTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATGGCAAGCATCGATTCT
196 CTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCT
* * * * *
733446 CTTAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATTCCTTTCATTAGGATGCATG
260 CATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATG
* *
733511 ACATTGATGCTTTGGTGTCATGAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTT
325 ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTT
* * * * * *
733576 GTCTCTTAAATAAGACAAACACGAATACTTATACTAATCCCCATTCATTTCAGGATTAGGCATCA
390 GTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCA
* *
733641 TAAACTTAGTCTTCTTATTAG
455 TAAACGTAGTCTTCTCATTAG
* *
733662 GATACATTATATTGAAGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACC-CCAATTTTTGTAAA
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTC-CCACCAATTTTTGTAAA
* * * * * * *
733726 GTCTAAGTTCGTGCCTCTAATGAGATACATATGGATTCTAGTAAAGATCTTTTTTCATTTTTTGA
63 GTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA
* * * *
733791 ATAGGTACTATAAACA-ATTCTCCTC-TTCAGGATAAATAATATTGATGATTTTATTTTGCTTGG
128 TTAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGG
* * * * * ** *
733854 AAATCTTTTCTTTACGTGATTTTCCTTAAAATCAAAGTTTATTCTTTAAACAAACCAAGCTTCGA
192 AAATCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
* * * * * * **
733919 TTCTCATAATAGCCCCCATTCCTTTTAAGATTGGGAATCAAACACACATTCACTTTTTTAGGATA
256 TTCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATA
* *
733984 CATGAAATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAA
321 CATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAA
* * * * * *
734049 GTTTATCTCTTAAAAACGACAAACATGAATACTCATGCTAATCCTCATTCTTTTCGGGATTAGGC
386 GTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGC
* * *
734114 ACCACAAATGCAGTCTTCTCATTAG
451 ACCATAAACGTAGTCTTCTCATTAG
* * * * * *
734139 GATATATCATATTGATGCTTTGGTTTCGTAGGAAAGGCTTTTTTCCTACCAATTTTCGTAAACTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * * * * *
734204 TAAGTTCAT---T---TTGTGATAAACATGGATTCTAGAAAAGATCTTTTTTCATTTTGTGATTA
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * *
734263 GGTACTACAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCGTGGAAA
131 GGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * ** *
734326 T-TTTTCTTCACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTC
195 TCTTTTCTT-ACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * * * * * * *
734390 ACATAATAGCCTCCATTCTTTTTTAGATTGAGAACCGAACACACATTCCCTTTATTAGGATCCAC
259 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
* * * * *
734455 GAAATTGATGCTTTGGTGTCATAAGAAACGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTT
324 GACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTT
* *
734520 TATCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAAGATTAGGCACC
389 TGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACC
734585 ATAAACGTAGTCTTCTCATTAG
454 ATAAACGTAGTCTTCTCATTAG
* * * * *
734607 GATACATCATATTGATGCTTTGGCTTCACAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTT
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * *
734672 TAAGTTCTTGACTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTGCTCATT
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTG-TGATT
* * * *
734736 AGGCGCTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * * * * *
734801 TCTTTTCTTTGCCCTATTTTCCTTAAAATCTATGCTCATCTTTTAAATAAGGCAAGCCTCGATTC
195 TCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
** * * * * * * * * * *
734866 TTGTAA-CGATCTCCATTCTTTTCATGATTTGGATGCCAAAACACATTTCCTTCGTTAGGGTAAA
259 TCATAATAG-TCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * * *
734930 TGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTCTTTCCACCGTTCTTGATAGAATCAAAGT
323 TGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGT
* * * *
734995 TTTTCTCTTAAATATGACAAACATGAATACTCATGCTAATCCTCC-TTCTTTTCGGGATTAGGCA
388 TTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCC-CCGTTCTTTTCAGGATTAGGCA
* * *
735059 CCACAAATGCAGTCTTCTCATTAG
452 CCATAAACGTAGTCTTCTCATTAG
* * * * * *
735083 GATATATCATATTGATGCTTTGGTTTCGTAGGAAAGGCTTTTTTCCTACCAATTTTCGTAAACTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * * * * *
735148 TAAGTTCAT---T---TTGTGATAAACATGGATTCTAGAAAAGATCTTTTTTCATTTTGTGATTA
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * *
735207 GGTACTACAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTTTGCGTGGAAA
131 GGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * ** *
735270 T-TTTTCTTCACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAAGCTTCGATTC
195 TCTTTTCTT-ACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* * * * * * * * * *
735334 ACATAATAGCCTCCATTCTTTTTTAGATTGAGAACCGAACACACATTCCCTTTATTAGGATCCAC
259 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACAT
* * * * *
735399 GAAATTGATGCTTTGGTGTCATAAGAAACGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTT
324 GACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTT
* *
735464 TATCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAAGATTAGGCACC
389 TGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACC
735529 ATAAACGTAGTCTTCTCATTAG
454 ATAAACGTAGTCTTCTCATTAG
* * * * *
735551 GATACATCATATTGATGCTTTGGCTTCACAGGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTT
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * *
735616 TAAGTTCTTGACTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTGCTCATT
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTG-TGATT
* * * *
735680 AGGCGCTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * * * * *
735745 TCTTTTCTTTGCCCTATTTTCCTTAAAATCTATGCTCATCTTTTAAATAAGGCAAGCCTCGATTC
195 TCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
** * * * * * * * * * *
735810 TTGTAA-CGATCTCCATTCTTTTCATGATTTGGATGCCAAAACACATTTCCTTCGTTAGGGTAAA
259 TCATAATAG-TCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACA
* * * *
735874 TGACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTCTTTCCACCGTTCTTGATAGAATCAAAGT
323 TGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGT
* * * *
735939 TTTTCTCTTAAATATGACAAACATGAATACTCATACTAGTCCCCGTTCTTTTCAAGATTAGGCAC
388 TTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCAC
* * *
736004 CATAAGCATAGTCTTCTCATTCG
453 CATAAACGTAGTCTTCTCATTAG
* * * * * *
736027 AATGCATCATAATGATGCTTTTGTTTTGCAAAAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * **
736092 TAAGTTCGTGCCTTAAATGAGACAAACATTGATTCTAGTAAAGATCTTCGTTCATTTTGTGATTA
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
* * *
736157 GGTACT-TAAACACATTCTGCTCATTAGAATAAATGATATTGATGATTTTATTTTGCATGGAAAT
131 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
* * * * * *
736221 ATTTTCTTTACCCTATTTTTCTTAGAATCAAAGTTCTTCTTTTAAATAAGGCAAGCATCGATTCT
196 CTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCT
* * * *
736286 CATAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACGCATTCCCTTCATTAGGATGCATG
260 CATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATG
*
736351 ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAAT-AAAGGTT
325 ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAA-GTT
* * * *
736415 TGTCTCTTAAATATGACAAACAAGAATACTGATACTAATCACCGTT-TTCTTCAGGATTAGGTC-
389 TGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTT-TTCAGGATTAGG-CA
*
736478 CCATAAACAG-AGTCTTCTTATTAG
452 CCATAAAC-GTAGTCTTCTCATTAG
* * *
736502 GATACA-CGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCC-CCAACTTTTATAAAGT
1 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGT
* * * * * *
736565 TTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCCAGTAATGATATATATTCATTTAGTGATT
65 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATT
* * *
736630 TGGCACTATAAACTCATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAA
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * *
736695 TCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGCAAGCATCGATTC
195 TCTTTTCTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTC
* *
736760 TCGTAATAGTCTCCATTCTTTTTAAGATTCGGAAGTC-AAAACACGA-TCCCTTCATTAGGATAC
259 TCATAATAGTCTCCATTCTTTTTAAGATTGGGAAG-CAAAAACAC-ATTCCCTTCATTAGGATAC
* * *
736823 ATGATATTGATGCTTTGGTGTCCTAAGAAAAGCTTTTCTTTTCC-CCATTTTTGATAGAATCAAA
322 ATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAA
* * * * *
736887 GTTTATCTCTTAAATATGACAAACTTGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGC
386 GTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGC
* * * *
736952 AGCATAAACATAGTCTTCTTATTAA
451 ACCATAAACGTAGTCTTCTCATTAG
*
736977 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTGTAAAG
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTCCCACCAATTTTTGTAAAG
* * * * * * * * *
737042 TCTACGTTCGTGCATCTATTGAGATAAACATAGATTCTAGTAAAGATCTTTTTTCATTTTGTGAA
64 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGAT
* * * * *
737107 TAAGTACTATAAACA-GTTCTCCTC-TTCAAGATAAATGATATTGATGATTTTATTTTGCGTGGA
129 TAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTTTGCATGGA
* * ** * *
737170 AATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAGGCTTCGAT
193 AATCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGAT
* * * * * *
737235 TCTCATAATAGCCTCCATTCTTTCTAAGATTGGGAAGCGAACACACTTTCCCTTTATTAGGATAC
257 TCTCATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* * * *
737300 ATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCCTTTTTTATAGAATCAAAG
322 ATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAG
* * * * *
737365 TTTATCTATTAAATATGACAAACTTGAATACTCATACTAATCTCCGTTCTTTTCAGGATTAGGCA
387 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCA
*
737430 CCATAAATGTAGTCTTCTCATTAG
452 CCATAAACGTAGTCTTCTCATTAG
* * ** *
737454 GATACATCATATTAATGCTTTGGTTTCGCAGGAAAGGCTTTTTTCGTACCAATTTTTATAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * * *
737519 TAAGTTTGTGACTCAAATGAGACAAACATAGATTCTAGTAATGATCTTCATTC-TTTTGGTCATT
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTT-GTGATT
* * * * *
737583 AGGCACTGTAAGCACATTCTCCTCAGTAGGATAAATGATATTGATTATTTTCTTTTGCAT-GACA
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA-A
* * ** *
737647 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCCTTGCCTCGAT
194 ATCTTTTC-TTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGG-CAAGCATCGAT
* * * * * * * * ** *
737712 TCCCGTGAGAATCTCCATT-TTTTTCATGATT-TGAATGCGAAAACACATTCGTTTCATTAGGGT
257 TCTCATAATAGTCTCCATTCTTTTT-AAGATTGGGAA-GCAAAAACACATTCCCTTCATTAGGAT
* ** * * * * *
737775 AAACAACATTGATGCTTTGGGGTTGCAAGAAAAGCTTTTCTTTTCACTGTTTTTGATAGAATCAA
320 ACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAA
* * * *
737840 AGTTTGTCTCTTAAATATGACAAACCTGAATACTCATACTAATCCCTGTTCATTTCAGGATTAGG
385 AGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGG
* * *
737905 CTCCATAAACATAGTCTTCTCGTTAG
450 CACCATAAACGTAGTCTTCTCATTAG
*
737931 GATACATCATATTGATGCTTCGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
1 GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
* * * *
737996 TAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGGAATGATCTTCATTCATTTGGTGATTT
66 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGA-TT
* * * * *
738061 A-GCACTATAAACACATTCTTCTCATTAGGATAAAAGATATTGACGATTTTCTTTTGCATGGAAT
130 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAA
* * * * *
738125 TCTTTTCTTTGTCC-TATTTTTCTTAAAATTAAAGTTCATCCCTTAAATATGGCAAGCATCGATT
195 TCTTTTC-TT-ACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATT
* * * ** ** *
738189 CTCATAACAGTCTCCCTTCTTTTCAAG-TTCGAAAAGTTAAAACACATTCCCTTCATTAGGATGC
258 CTCATAATAGTCTCCATTCTTTTTAAGATT-GGGAAGCAAAAACACATTCCCTTCATTAGGATAC
* * * * * * *
738253 ATGATATTGAAGCTTTAGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTAAAAGAATCCAAG
322 ATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAG
* * * *
738318 TTTGTCTCTTAAATAAGACAAACAGGAATACTCATAGTAATCCCCATTCTTTTCAGGATT-GAGC
387 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAG-GC
* * *
738382 ACCATAAACATAGTTTTCCCATTAG
451 ACCATAAACGTAGTCTTCTCATTAG
* * * *
738407 GAAACA-CGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTTCCCCCCCAATATTTGTAAAG
1 GATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTT-CCCACCAATTTTTGTAAAG
* * * * * * *
738471 TCTAAGTTCATACCTTAAATGAGTCAAATATGGATTCTAGTAATAATCTTCT-TTCATTTGGTGA
64 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT-TATTCATTTTGTGA
* * *
738535 TTTGGCACTATAAACACATTCTCTTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGA
128 TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGA
* *
738600 AATCTTTTCTTTGA-CTTATTTTCCTTAAAATCAAAGTTCATCCCTTAAA-AAAGCAAGCATCGA
193 AATCTTTTC-TT-ACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGA
738663 TTCTC
256 TTCTC
738668 GTAACTGATG
Statistics
Matches: 9954, Mismatches: 1572, Indels: 302
0.84 0.13 0.03
Matches are distributed among these distances:
467 6 0.00
468 605 0.06
469 149 0.01
470 45 0.00
471 7 0.00
472 1 0.00
473 13 0.00
474 322 0.03
475 2247 0.23
476 3000 0.30
477 2127 0.21
478 819 0.08
479 354 0.04
480 175 0.02
481 84 0.01
ACGTcount: A:0.30, C:0.18, G:0.14, T:0.38
Consensus pattern (475 bp):
GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC
TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAAT
CTTTTCTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTC
ATAATAGTCTCCATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGA
CATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTG
TCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCAT
AAACGTAGTCTTCTCATTAG
Found at i:727507 original size:159 final size:157
Alignment explanation
Indices: 726786--737040 Score: 1694
Period size: 159 Copynumber: 64.7 Consensus size: 157
726776 ATAATAGCCT
* * * * * *
726786 CCATTCTTTTTAAGATTGGGAAGCGA-ACACACTTTC-CCTTTATTAGGATACATGAAATTGATG
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCC-TTATTAGGATACATCATATTGATG
* ** * ** *
726849 CTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTATCTATTAA
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTTAA
* * * * **
726914 ATATGACAAACTTGAATACTCATACTAATTT
128 ATACGACAAACATG-ATACTTATAATAATCC
* * * * *** * * * * *
726945 CCGTTCTTTTCAGGATTAGGCACCATAAATGTAGTCTTCTCATTAGGATACATCATATTAACGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * * *
727010 TTGGTTTTGCAGGAAAGGC-TTT-TTTCATACCAATTTTT-ATAAAGTCTAAGTTCGTGC-CTCA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGATAAA-TCAAAGTTCGT-CTCTTA
* * ** * **
727071 AATAAGACAAACATGGATTC-TAGCGATGATTT
127 AATACGACAAACAT-GATACTTA-TAATAATCC
** * * *** * * * *
727103 TTATACATTTGGTGATTTGGCA-CTATAAACACATTTTCCTCATTAGGATGA-ATGATATTGATG
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGAT-ACATCATATTGATG
* ** * * * * * * * * * *
727166 ATTTTCTTTTGTAGGGAAATCTTTTCTTAGCC-CTACTTTCCTT-A-AAACCAAAGTTCATCTTT
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTT-TCCACCA-TTT--TTGATAAATCAAAGTTCGTCTCT
* * * * ** * *
727228 TAAATATGGCAAGCATCGATTCTCGTAATAGTCT
125 TAAATACGACAAACAT-GATACTTATAATAATCC
* * * * *
727262 CCATTCTTTTTAACATTGGGAAGCGA-AAACACATTC-CCTTCATTAGGCTACATCACATTGATG
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCTT-ATTAGGATACATCATATTGATG
** * *
727325 CTTTGGTGCCGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAA
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTTAA
* *
727390 ATACGACAAACATGAAAACTTATACTAATCC
128 ATACGACAAACATG-ATACTTATAATAATCC
* * ** * *
727421 CCGTTCTTTTTAGGATTAGGCAGCATAAACTTAGTCTTCTTATTAGGATACATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * *
727486 TTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCCATTTTTG-TACAGTCTAAGTTCGTGCGT-GT
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTC-CA-CCATTTTTGATA-AATCAAAGTTCGT-C-TCTT
* * * * *
727549 -AGTGA-GATAAACATGGATTC-TAGTGAAGAA-CT
126 AAAT-ACGACAAACAT-GATACTTA-T-AATAATCC
*** * * * * *
727581 TTTTTCATTTTT-TGAATAGG-TGCTATAAACA-ATTCTCCTCT-TTAGGATAAATGATATTGAT
1 CCATTC-TTTTTAAGATTAGGCAGC-ATAAACACATTCTCCT-TATTAGGATACATCATATTGAT
* ** * * * * * *** *** ** * * *
727642 GATTTTATTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAAAAAAGTACATC-CTTTA
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAATCAAAGTTCGTCTCTTAA
* * * * **
727706 A-ACAAACCAAGCTTCGATTCTTATAATAGCCC
128 ATAC-GA-CAAACAT-GATACTTATAATAATCC
* * * * *
727738 CCATTCTTTTTAAGATTGGGAAGCGA-ACACACATTC-CCTTTATTAGGATACATGAAATTGATG
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCC-TTATTAGGATACATCATATTGATG
* ** * * *
727801 CTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTCGATAAAATCAAAGTTTGTCTCTCAA
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT-AAATCAAAGTTCGTCTCTTAA
* *
727866 ATACGACAAACATGAATACTCATACTAATCC
128 ATACGACAAACATG-ATACTTATAATAATCC
* * * * * * *** * * * *
727897 TCGTTCTTTTCAGGATTAGGCACCACAAATGTAGTCTTCTCATTAGGATACATCATAATGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * * *
727962 TTGGTTTTGCGAGAAAGGCTTTT-TTCCCACCAATTTTTG-TAAAGTCTAAGTTCGTGC-CTCAA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAAA-TCAAAGTTCGT-CTCTTAA
* * *
728024 ATAAGACAAACATGGATTC-TAGTAA-AGATCT
128 ATACGACAAACAT-GATACTTA-TAATA-ATCC
*** * ** * * * * * * *
728055 TTGTTCATTTTCTGATTAGGTA-CTACAAACACAATCTGCTCATTAGGATA-AACGATCTTGATG
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGATACATC-ATATTGATG
* ** * * * * ** * **
728118 ATTTTATTTTGCATGGAAATCTTTTCTTT--ACCTTATTTTTCTTAAAATCAAAGCTAATC-CTT
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC--ATTTTTGAT-AAATCAAAGTTCGTCTC-T
* * * * * *
728180 TAAATGA-GGCAAGCATCGATTCTCATAATAGTCT
125 TAAAT-ACGACAAACAT-GATACTTATAATAATCC
* * * * **
728214 CCATTCTTTTCAAGATT-GAGAAGCAAAAACACATTC-CCTTCATTAGGATGCAAGATATTGATG
1 CCATTCTTTTTAAGATTAG-GCAGCATAAACACATTCTCCTT-ATTAGGATACATCATATTGATG
* * * * * ** *
728277 CTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCATCGTTTGTGGCAGAATCAAAGTTTGTCTCTTAA
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTTAA
* * * *
728342 ATACGACACATAAGAATACTGATAATAATCC
128 ATACGACAAACATG-ATACTTATAATAATCC
** * * * * *
728373 CTGTT-TTTTTCAAGATTAGGTACCATAAACATATACTTCTTATTAGGATACA-CA-ATTTGATG
1 CCATTCTTTTT-AAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATA-TTGATG
* * * *
728435 CTTTAGTTTCGCAAGAAAGGC-TTTCTTCCCCCCAATTTTT-ATAAAGTCTAAA-TTCGTGC-CT
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAAA-TC-AAAGTTCGT-CTCT
* * * *
728496 CAAATGA-GACAAACATGGATTC-TAGTAATGATCT
125 TAAAT-ACGACAAACAT-GATACTTA-TAATAATCC
** * * * * * *
728530 TTATTC-ATTTAGTGATTTGGCA-CTATAAACACATTCTCCTCATTAGGATAAATGATATTGATG
1 CCATTCTTTTTA-AGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGATACATCATATTGATG
* ** ** * * ** * * *
728593 ATTTTCTTTTACAATGGAAATCTTTTCTTTGCC-TTATTTTCCTTA-AAATCAAAGTTCATCTTT
64 CTTTGGTTTCGCAA-GAAAAGCTTTTCTTT-CCACCATTTT--TGATAAATCAAAGTTCGTCTCT
* * * * * * *
728656 TAAATATGGCAATCATCGATTCTTGTAATAGTCT
125 TAAATACGACAAACAT-GATACTTATAATAATCC
** * * * * * *
728690 TTATTCTTTTTAAGATTGGGAAGCAAAAACACATTC-CCTTCATTAGGATACATGACATTGACGC
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTT-ATTAGGATACATCATATTGATGC
* ** * *
728754 TTTGGTGTCATAAGAAAAGCCTTTCTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAA
65 TTTGGTTTCGCAAGAAAAGCTTTTC-TTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTTAA
* *
728819 ATACGACAAACATGAATACTCATACTAATCC
128 ATACGACAAACATG-ATACTTATAATAATCC
* * * * * *
728850 CCATTCTTTTTAGGATTAGACAGCGTAAACATAGTCTTCTTATTAGGATACATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * **
728915 TTAGTTTCGCAAGAAAGGCTTTTTTTTCACACCAAATTTTG-TAAAGTTTAAGTTCGTGC-CTCT
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGATAAA-TCAAAGTTCGT-CTCT-T
* * * *
728978 -AAT--GAGATACAT-ATAGATCTAGTAA-ATATCT
126 AAATACGACAAACATGATA-CT-TA-TAATA-ATCC
*** * * * * * * *
729009 TTTTTCATTTTT-TGAATAGGTA-CTATAAACA-AGTCTCCTCT-TCAGGATAAATGATATTGAT
1 CCATTC-TTTTTAAGATTAGGCAGC-ATAAACACATTCTCCT-TATTAGGATACATCATATTGAT
* ** * ** * * * *** * *
729070 GATTTTATTTTGCGTGGAAATCTTTTCTTTACGTTATTTTCCTTA-AAATCAAAGTTCATC-CAT
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT--TGATAAATCAAAGTTCGTCTC-T
* * * * * * **
729133 TAAACA-AACCAAGCTTCGATTCTCATAATAGCCC
125 TAAATACGA-CAAACAT-GATACTTATAATAATCC
* * * * * *
729167 CCATTCCTTTTAAGATT-GG--GAATTGAATACACATTCACTTTATTAGGATACATGAAATTGAT
1 CCATTCTTTTTAAGATTAGGCAGCA-T-AA-ACACATTCTCCTTATTAGGATACATCATATTGAT
* * ** * * * **
729229 TCTTTGGTGTCATAAGAAAAGTTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTATCTCTTA
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT-AAATCAAAGTTCGTCTCTTA
* * * *
729294 AAAACGACAAACATGAATACTCACACTAATCC
127 AATACGACAAACATG-ATACTTATAATAATCC
* * * * * * * * * * *
729326 TCGTTCTTTTCAGGATTAGCCACCACAAACGCAGTCTTCTCATTAGGATACATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * * * *** *
729391 TTGGTTTCACAGGAAAGGC-TTT-TTTCCTACCAATTTTCG-TAAAGTCTAAGTTTGTGAATCAA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGATAAA-TCAAAGTTCGTCTCTTAA
* * *
729453 ATGA-GACAAACATGGATTC-TAGTGAA-GATCT
128 AT-ACGACAAACAT-GATACTTA-T-AATAATCC
*** * ** * * * * *
729484 TTGTTCATTTTCTGATTAGGTA-CTACAAACACAATCTGCTCT-TTAGGATA-AACAATATTGAT
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCT-TATTAGGATACATC-ATATTGAT
* ** * * * * ** *
729546 GATTTTATTTTGCATGGAAATCTTTTCTTT--ACCTATTTTTCTTAAAATCAAAGTTCATC-CTT
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGAT-AAATCAAAGTTCGTCTC-T
* * * * * ** * *
729608 TAAATAAGGCAAGCATCGATTCTCATACCAGTCT
125 TAAATACGACAAACAT-GATACTTATAATAATCC
* * * * * * ** *
729642 CCATT-TTTTCCAAGATTGAGAC-GCAAAAACATATTC-CTTTCATTAGGATGCAAGACATTGAT
1 CCATTCTTTT-TAAGATT-AGGCAGCATAAACACATTCTCCTT-ATTAGGATACATCATATTGAT
* * * * **
729704 GCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCGGTAAAATCAAAGTTTATCTCTTA
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT-AAATCAAAGTTCGTCTCTTA
* * * *
729769 AAAATGACAAACATGAATACTCATACTAATCC
127 AATACGACAAACATG-ATACTTATAATAATCC
* * * * * * ** * * **
729801 TCATTCTTTTCAGGATTAGGAACCACAAATGCAGTCTTCTCGTTAGGATACATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * * * ** *
729866 TTGGTTTTGCAGGAAAGGC-TTT-TTTCCTACCAATTTTCG-TAAAGTCTAAGTTTGTGACTCAA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGATAAA-TCAAAGTTCGTCTCTTAA
* * * *
729928 ATGA-GACAAAGATGGATTC-TAGTAATGATCT
128 AT-ACGACAAACAT-GATACTTA-TAATAATCC
** * * * * * **
729959 TTATTC-ATTTAGTGATTTGGCA-CTATAAACACATTCTCCTCATTAGGATAAATGTTATTGATG
1 CCATTCTTTTTA-AGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGATACATCATATTGATG
* ** ** * * * ** * * *
730022 ATTTTCTTTTACAATGGAAATCTTTTCTTAGCC-TTATTTTCCTTA-AAATCAAAGTTCATCTAT
64 CTTTGGTTTCGCAA-GAAAAGCTTTTCTT-TCCACCATTTT--TGATAAATCAAAGTTCGTCTCT
* * * * * *** * *
730085 TAAATATGGCAAGCATCAATTCTCGCAATAGTCT
125 TAAATACGACAAACAT-GATACTTATAATAATCC
* * * * * *
730119 CCATTCTTTTTAAGATTGGGAAGCAAAAACAAATTC-CCTTCATTAGGATACATGACATTGATGC
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTT-ATTAGGATACATCATATTGATGC
* * * * *
730183 TTTGATGTCGTAAGAAAAGCTTTTTTTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTA
65 TTTGGTTTCGCAAGAAAAGC--TTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTTA
* **
730248 AATACGATAAACATGAATACTTATTCTAATCC
127 AATACGACAAACATG-ATACTTATAATAATCC
* * * * * * * * **
730280 CCGTTCTTTTTAGGATTCGACAGCGTCAACATAGTCTTTTTATTAGGATACATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * *
730345 TTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCCATTTTTG-TAAAGTCTAAGTTCTTGC-CTCT
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTC-CA-CCATTTTTGATAAA-TCAAAGTTCGT-CTCT-T
* * * * * *
730408 -AGTGA-GATACATATGGATTC-TAGTAA-AGATCT
126 AAAT-ACGACAAACAT-GATACTTA-TAATA-ATCC
*** * * * * * * * *
730440 TTTTTCATTTTT-TGAATATGTA-CTATAAATA-ATTCTCCTCT-TCAGGATAAATGATATTGAT
1 CCATTC-TTTTTAAGATTAGGCAGC-ATAAACACATTCTCCT-TATTAGGATACATCATATTGAT
* ** * * * * *** * *
730501 GATTTTATTTTGCATGGAAATCTTTTC-TTCCTGTTATTTTCCTTA-AAATCAAAGTTCATC-CT
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACCATTTT--TGATAAATCAAAGTTCGTCTCT
* * * * * * **
730563 TTAA-ACAAACCAAGCTTCGATTCTCATAATAGCCC
125 TAAATAC-GA-CAAACAT-GATACTTATAATAATCC
* * * * * * * * *
730598 CCAGTCCTTTTAAGATT-GG--GAATTGAACATACATTCACTTTTTTAGGATACATGAAATTGAT
1 CCATTCTTTTTAAGATTAGGCAGCA-T-AA-ACACATTCTCCTTATTAGGATACATCATATTGAT
* * * * **
730660 GCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTATCTCTTA
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT-AAATCAAAGTTCGTCTCTTA
* * * ** *
730725 AAAACAACAAACATGAACACACATACTAATCC
127 AATACGACAAACATG-ATACTTATAATAATCC
* * * * * ** * *
730757 TCATGCTTTTCAAGATTAGGCACCACAAATGCAGTCTTCTCT-TTAGGATACATCATATTGATGC
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCT-TATTAGGATACATCATATTGATGC
* * * * * * ** **
730821 TTTGGTTTCGTAGGAAAGGC-CTT-TTTCCTACCAATTTTCG-TAAAGTCTAAGTTCGTGACCCA
65 TTTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGATAAA-TCAAAGTTCGTCTCTTA
* * *
730883 AATGA-GACAAACATGGATTC-TAGTAATGATCT
127 AAT-ACGACAAACAT-GATACTTA-TAATAATCC
** * *** *
730915 TTATTCATTTGGTGATTTGGCA-CTATAAACACATTCTCCTTATTAGGATGA-A-CGATATTGAT
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGAT-ACATC-ATATTGAT
* ** * * * * * ** * * *
730977 GATTTTCTTTTGCACGGAAATCTTCTCCTAGCC-CTATTTTCCTTA-AAATCAAAGTTCATC-CT
63 GCTTTGGTTTCGCAAGAAAAGCTT-TTCTTTCCACCATTTT--TGATAAATCAAAGTTCGTCTC-
* * * * * *
731039 TTAAATATGGCAAGCATCGATTCTCT-TAATAGTCT
124 TTAAATACGACAAACAT-GATACT-TATAATAATCC
* * * * * * *
731074 CCATTCTTTTCAAGATT-GAGAAGCAAAAACACATTC-CTTTCATTAGGATGCATGACATTGATG
1 CCATTCTTTTTAAGATTAG-GCAGCATAAACACATTCTCCTT-ATTAGGATACATCATATTGATG
** * * * *
731137 CTTTGGGGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAA
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTTAA
*
731202 ATACGACAAACATGAATACTCA-AACTAATCC
128 ATACGACAAACATG-ATACTTATAA-TAATCC
* * * * ** * *
731233 CCGTTCTTTTCAGGATTAGGCACCAT-AACGTAGTCTCCTCT-TTAGGATACATCATATTGACGC
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCT-TATTAGGATACATCATATTGATGC
* * * * * ** *
731296 TTTGGTTTCGCAGGAAAGGC-TTT-TTTCCTACCAATTTTTG-TGAAGTCTAAGTTCATGACTCA
65 TTTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGAT-AAATCAAAGTTCGTCTCTTA
* **
731358 AATGA-GACAAACATGGA-A-TCTAGTAATGATAT
127 AAT-ACGACAAACAT-GATACT-TA-TAATAATCC
* * * * * * *
731390 TCATTCTTTTGGTCAG--TAGACA-CTATAAACACATTCTCCTCAATAGGATAAATGATATTGAT
1 CCATTCTTTT--TAAGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGATACATCATATTGAT
* ** * * * * ** * *
731452 GATTTTCTTTTGCATGAAAATCTTTTCTTTGCC-CTATTTTTCTTACAATGAAAGTTCATC-CTT
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTGATA-AATCAAAGTTCGTCTC-T
* * * * * * * * *
731515 TAAATAAGGCAAGCCACGATTCTCATAACAGTCT
125 TAAATACGACAA-ACATGATACTTATAATAATCC
* * * * * * *
731549 CCAGTTTTTTTTCCATGATTTGG-ATGCCA-AAACACATTC-CCTTTATTAGGGTAAATGACATT
1 CCA-TTCTTTTT--AAGATTAGGCA-G-CATAAACACATTCTCC-TTATTAGGATACATCATATT
* * * * * * *
731611 GATGCTTCGCGGTT-GTAAAAAAAGCTTTT-TTTGCACCGTTTTTGATAGAATCAAAGTTTGTCT
60 GATGCTTTG-GTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCT
* * * *
731674 CTTAAATATGACAAACATGAATACTCATACTAGTCC
123 CTTAAATACGACAAACATG-ATACTTATAATAATCC
* * * * * * * * *** * * *
731710 CCGTTCTTTTCAAGATTAGACACCATAAACATAGTCTTCTCATTTTAATAGATGATAATGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * *
731775 TTGGTTTTGCAAG-AAAGGTTTT-TTTCCCACCAATTTTT-TTAAAGTCTAAGTTCGTGC-CTCA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACC-ATTTTTGATAAA-TCAAAGTTCGT-CTCTTA
* *
731836 AATGA-GACAAACATGGATTC-TAGTAA-AGATCT
127 AAT-ACGACAAACAT-GATACTTA-TAATA-ATCC
* * ** * * * * * * *
731868 TCATTCATTTTGTGATCAGGTA-CTATAAACACATTCTGCTCATTAGGATAAATGATATTGATGA
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGATACATCATATTGATGC
** * * * * ** **
731932 TTTTATTTTGCATGAAAATCTTTTCTTT--ATCTTATTTTTCTTAAAATCAAAGTTAATC-CTTT
65 TTTGGTTTCGCAAGAAAAGCTTTTCTTTCCA-C-CATTTTTGAT-AAATCAAAGTTCGTCTC-TT
* * * * * * * *
731994 AAATAAGGCAAGCATCGATTCTCATAACAGTCT
126 AAATACGACAAACAT-GATACTTATAATAATCC
* * * * ** * *
732027 CCATTCTTTTCAAGAGT-GAGAAGCAAAAACACATTC-CCTTCATTAGGAGGCATGACATTGATG
1 CCATTCTTTTTAAGATTAG-GCAGCATAAACACATTCTCCTT-ATTAGGATACATCATATTGATG
* * * * * *
732090 CTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCATCATTTGTGACAGAATCAAAGTTTGTCTCTTAA
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTTAA
* * *
732155 ATACGACACACAGGAATACTGATAATAATCC
128 ATACGACAAACATG-ATACTTATAATAATCC
* * * * * * *
732186 CCATT-TTTTTCAAGATTAGGTACCATAAATATAGTCTTCTTATTAGGATACA-CGAT-TTGAGG
1 CCATTCTTTTT-AAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATC-ATATTGATG
* * * * *
732248 CTTTAGTTTCGCAAGAAAGGC-TTTCTTCCCCCCAATTTTT-ATAAAGTCTAAA-TTCG-CGCCT
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAAA-TC-AAAGTTCGTC-TCT
* * * *
732309 CAAATGA-GACAAACATGGATTC-TAGTAATGATCT
125 TAAAT-ACGACAAACAT-GATACTTA-TAATAATCC
** * * * * * **
732343 TTATTC-ATTTAGTGATTTGGCA-CTATAAACACATTCTCCTCATTAGGATAAATGTTATTGATG
1 CCATTCTTTTTA-AGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGATACATCATATTGATG
* ** ** * * * ** * * *
732406 ATTTTCTTTTACAATGGAAATCTTTTCTTAGCC-TTATTTTCCTTA-AAATCAAAGTTCATCTTT
64 CTTTGGTTTCGCAA-GAAAAGCTTTTCTT-TCCACCATTTT--TGATAAATCAAAGTTCGTCTCT
* * ** * ** * *
732469 TAAATATGGCAGGCATCGATTCTCGTAATAGTCT
125 TAAATACGACAAACAT-GATACTTATAATAATCC
* * * * * *
732503 CTATTCTTTTTAAGATTGGGAAGCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGC
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTT-ATTAGGATACATCATATTGATGC
* * *
732567 TTTGGTGTCGTAAGAAAAGCTTTTCTTTTCCACCATTTTTGATAAAATCAAAGTTTGTCTCTTAA
65 TTTGGTTTCGCAAGAAAAGCTTTTC-TTTCCACCATTTTTGAT-AAATCAAAGTTCGTCTCTTAA
* * * *
732632 ATATGACAAATATGAATACTCATACTAATCC
128 ATACGACAAACATG-ATACTTATAATAATCC
* * * * * * * * *
732663 CCGTTCTTTTTAGGATTAGACAGCGTCAATATAGTCTTCTTATTAGGATACATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * *
732728 TTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCCATTTTTG-TAAAGTCTAAGTTCGTGC-CTCT
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTC-CA-CCATTTTTGATAAA-TCAAAGTTCGT-CTCT-T
* * * * * *
732791 -AATGA-GATACATATGGATTC-CAGTAA-AGATCT
126 AAAT-ACGACAAACAT-GATACTTA-TAATA-ATCC
*** * * * * * *
732823 TTTTTCATTTTT-TGAATAGGTA-CTATAAACA-ATTCTCCTCT-TCAGGATAAATGATATTGAT
1 CCATTC-TTTTTAAGATTAGGCAGC-ATAAACACATTCTCCT-TATTAGGATACATCATATTGAT
* ** * ** * * * *** * **
732884 GATTTTATTTTGCGGGGAAATCTTTTCTTTACGTTATTTTCCTTA-AAATCAAAGTTTATC-CTT
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT--TGATAAATCAAAGTTCGTCTCTT
* * * * * * **
732947 TAA-ACAAACCAAGCTTCGATTCTCATAATAGCCC
126 AAATAC-GA-CAAACAT-GATACTTATAATAATCC
* * * * * * * * *
732981 CCATTCCTTTTAAGATTGGGAATCA-AACACACATTCACTTTTTTAGGATACATGAAATTGATGC
1 CCATTCTTTTTAAGATTAGGCAGCATAA-ACACATTCTCCTTATTAGGATACATCATATTGATGC
* * * * **
733045 TTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTATCTCTTAAA
65 TTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT-AAATCAAAGTTCGTCTCTTAAA
* ** *
733110 AACGACAAACATGAATACAAATACTAATCC
129 TACGACAAACATG-ATACTTATAATAATCC
* * * * * ** * * * *
733140 TCATTCTTTTCAGGATTAGGCACCACAAATGCAGTCTTCTCATTAGGATACATAATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * * ** *
733205 TTGGTTTCGCAGGAAAGGC-TTT-TTTCCTACCAATTTTCG-TAAAGTCTAAGTTTGTGACTCAA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGATAAA-TCAAAGTTCGTCTCTTAA
* * *
733267 ATGA-GACAAACATGGATTC-TAGTAATGATCT
128 AT-ACGACAAACAT-GATACTTA-TAATAATCC
** * *** * *
733298 TTATTCATTTGGTGATTTGGCA-CTATAAACACATTCTCCTCATTAGGATGA-A-CGATATTGAT
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGAT-ACATC-ATATTGAT
* ** * * * * * * * *
733360 GATTTTCTTTTGCATGGAAATCTTCTCTTTGCC-CTATTTTCCTTA-AAATCAAAGTTCATC-CT
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT--TGATAAATCAAAGTTCGTCTC-
* * * * * *
733422 TTAAATATGGCAAGCATCGATTCTCT-TAATAGTCT
124 TTAAATACGACAAACAT-GATACT-TATAATAATCC
* * * * * * *
733457 CCATTCTTTTCAAGATT-GAGAAGCAAAAACACATTC-CTTTCATTAGGATGCATGACATTGATG
1 CCATTCTTTTTAAGATTAG-GCAGCATAAACACATTCTCCTT-ATTAGGATACATCATATTGATG
* *** * *
733520 CTTTGGTGTCATGAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTTAA
* * *
733585 ATAAGACAAACACGAATACTTATACTAATCC
128 ATACGACAAACATG-ATACTTATAATAATCC
* * * * ** * * * *
733616 CCATTCATTTCAGGATTAGGCATCATAAACTTAGTCTTCTTATTAGGATACATTATATTGAAGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * *
733681 TTGGTTTCGCAAGAAAGGCTTTTTTTTCACCCCAATTTTTG-TAAAGTCTAAGTTCGTGC-CTCT
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGATAAA-TCAAAGTTCGT-CTCT-T
* * * * *
733744 -AATGA-GATACATATGGATTC-TAGTAA-AGATCT
126 AAAT-ACGACAAACAT-GATACTTA-TAATA-ATCC
*** * * * * * *
733776 TTTTTCATTTTT-TGAATAGGTA-CTATAAACA-ATTCTCCTCT-TCAGGATAAATAATATTGAT
1 CCATTC-TTTTTAAGATTAGGCAGC-ATAAACACATTCTCCT-TATTAGGATACATCATATTGAT
* ** * ** * * * *** * **
733837 GATTTTATTTTGCTTGGAAATCTTTTCTTTACGTGATTTTCCTTA-AAATCAAAGTTTAT-TCTT
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT--TGATAAATCAAAGTTCGTCTCTT
* * * * * * **
733900 TAA-ACAAACCAAGCTTCGATTCTCATAATAGCCC
126 AAATAC-GA-CAAACAT-GATACTTATAATAATCC
* * * * * * * * *
733934 CCATTCCTTTTAAGATTGGGAATCA-AACACACATTCACTTTTTTAGGATACATGAAATTGATGC
1 CCATTCTTTTTAAGATTAGGCAGCATAA-ACACATTCTCCTTATTAGGATACATCATATTGATGC
* * * **
733998 TTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTATCTCTTAAA
65 TTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT-AAATCAAAGTTCGTCTCTTAAA
* * **
734063 AACGACAAACATGAATACTCATGCTAATCC
129 TACGACAAACATG-ATACTTATAATAATCC
* *** * * ** * * * *
734093 TCATTCTTTTCGGGATTAGGCACCACAAATGCAGTCTTCTCATTAGGATATATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * * *
734158 TTGGTTTCGTAGGAAAGGC-TTT-TTTCCTACCAATTTTCG-TAAACTCTAAGTTCAT-T-TT--
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGATAAA-TCAAAGTTCGTCTCTTAA
* * * * * *
734216 GT--GATAAACATGGATTC-TAGAAAAGATCT
128 ATACGACAAACAT-GATACTTATAATA-ATCC
*** * ** * * * * *
734245 TTTTTCATTTTGTGATTAGGTA-CTACAAACA-ATTCTCCTCT-TCAGGATAAATGATATTGATG
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCT-TATTAGGATACATCATATTGATG
* ** * ** * * * * *
734307 ATTTTATTTTGCGTGGAAA-TTTTTC-TT-CACGTTATTTTCCTTA-AAATCAAAGTTCATC-CT
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCAC--CATTTT--TGATAAATCAAAGTTCGTCTCT
* * * * * ** *
734367 TTAA-ACAAACCAAGCTTCGATTCACATAAT-AGCC
125 TAAATAC-GA-CAAACAT-GATACTTATAATAATCC
* * * * * *
734401 TCCATTCTTTTTTAGATT-GAGAACCGA-ACACACATTC-CCTTTATTAGGATCCA-CGAAATTG
1 -CCATTCTTTTTAAGATTAG-GCAGC-ATAAACACATTCTCC-TTATTAGGATACATC-ATATTG
* ** * * **
734462 ATGCTTTGGTGTCATAAGAAACGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTATCTCT
61 ATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCT
* *
734527 TAAATACGACAAACATGAATACTCATACTAATCC
125 TAAATACGACAAACATG-ATACTTATAATAATCC
* * * ** * * *
734561 CCGTTCTTTTCAAGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * ** * ** *
734626 TTGGCTTCACAGGAAAGGC-TTT-TTTCCTACCAATTTTTG-TAAAGTTTAAGTTCTTGACTCAA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGATAAA-TCAAAGTTCGTCTCTTAA
* * *
734688 ATGA-GACAAACATGGATTC-TAGTAATGATCT
128 AT-ACGACAAACAT-GATACTTA-TAATAATCC
* **** * * * * *
734719 TCATTCTTTTGCTCATTAGGC-GCTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGA
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGATACATCATATTGATGC
** * * * * * * * * * *
734783 TTTTCTTTTGCATGAAAATCTTTTCTTTGCC-CTATTTTCCTTA-AAATCTATGCTCATCTTTTA
65 TTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT--TGATAAATCAAAGTTCGTCTCTTA
* * * * * * ** *
734846 AATAAGGCAAGCCTCGATTCTTGTAACGATCT
127 AATACGACAAACAT-GATACTTATAATAATCC
* * * * * * * *
734878 CCATTCTTTTCATGATTTGG-ATGCCA-AAACACATT-TCCTTCGTTAGGGTAAATGACATTGAT
1 CCATTCTTTTTAAGATTAGGCA-G-CATAAACACATTCTCCTT-ATTAGGATACATCATATTGAT
* * * **
734940 GCTTTGGGGTT-GCAAGAAAAGCTTTTCTTTCCACCGTTCTTGATAGAATCAAAGTTTTTCTCTT
63 GCTTT-GGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTT
* * **
735004 AAATATGACAAACATGAATACTCATGCTAATCC
126 AAATACGACAAACATG-ATACTTATAATAATCC
*** * * ** * * * *
735037 TCC-TTCTTTTCGGGATTAGGCACCACAAATGCAGTCTTCTCATTAGGATATATCATATTGATGC
1 -CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGC
* * * * * *
735101 TTTGGTTTCGTAGGAAAGGC-TTT-TTTCCTACCAATTTTCG-TAAACTCTAAGTTCAT-T-TT-
65 TTTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGATAAA-TCAAAGTTCGTCTCTTA
* * * * * *
735160 -GT--GATAAACATGGATTC-TAGAAAAGATCT
127 AATACGACAAACAT-GATACTTATAATA-ATCC
*** * ** * * * * *
735189 TTTTTCATTTTGTGATTAGGTA-CTACAAACA-ATTCTCCTCT-TCAGGATAAATGATATTGATG
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCT-TATTAGGATACATCATATTGATG
* ** * ** * * * * *
735251 ATTTTATTTTGCGTGGAAA-TTTTTC-TT-CACGTTATTTTCCTTA-AAATCAAAGTTCATC-CT
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCAC--CATTTT--TGATAAATCAAAGTTCGTCTCT
* * * * * ** *
735311 TTAA-ACAAACCAAGCTTCGATTCACATAAT-AGCC
125 TAAATAC-GA-CAAACAT-GATACTTATAATAATCC
* * * * * *
735345 TCCATTCTTTTTTAGATT-GAGAACCGA-ACACACATTC-CCTTTATTAGGATCCA-CGAAATTG
1 -CCATTCTTTTTAAGATTAG-GCAGC-ATAAACACATTCTCC-TTATTAGGATACATC-ATATTG
* ** * * **
735406 ATGCTTTGGTGTCATAAGAAACGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTATCTCT
61 ATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCT
* *
735471 TAAATACGACAAACATGAATACTCATACTAATCC
125 TAAATACGACAAACATG-ATACTTATAATAATCC
* * * ** * * *
735505 CCGTTCTTTTCAAGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * * ** * ** *
735570 TTGGCTTCACAGGAAAGGC-TTT-TTTCCTACCAATTTTTG-TAAAGTTTAAGTTCTTGACTCAA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTTGATAAA-TCAAAGTTCGTCTCTTAA
* * *
735632 ATGA-GACAAACATGGATTC-TAGTAATGATCT
128 AT-ACGACAAACAT-GATACTTA-TAATAATCC
* **** * * * * *
735663 TCATTCTTTTGCTCATTAGGC-GCTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGA
1 CCATTCTTTTTAAGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGATACATCATATTGATGC
** * * * * * * * * * *
735727 TTTTCTTTTGCATGAAAATCTTTTCTTTGCC-CTATTTTCCTTA-AAATCTATGCTCATCTTTTA
65 TTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT--TGATAAATCAAAGTTCGTCTCTTA
* * * * * * ** *
735790 AATAAGGCAAGCCTCGATTCTTGTAACGATCT
127 AATACGACAAACAT-GATACTTATAATAATCC
* * * * * * * *
735822 CCATTCTTTTCATGATTTGG-ATGCCA-AAACACATT-TCCTTCGTTAGGGTAAATGACATTGAT
1 CCATTCTTTTTAAGATTAGGCA-G-CATAAACACATTCTCCTT-ATTAGGATACATCATATTGAT
* * * **
735884 GCTTTGGGGTT-GCAAGAAAAGCTTTTCTTTCCACCGTTCTTGATAGAATCAAAGTTTTTCTCTT
63 GCTTT-GGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCTT
* * * *
735948 AAATATGACAAACATGAATACTCATACTAGTCC
126 AAATACGACAAACATG-ATACTTATAATAATCC
* * * * * * * * * * * *
735981 CCGTTCTTTTCAAGATTAGGCACCATAAGCATAGTCTTCTCATTCGAATGCATCATAATGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* * * *
736046 TTTGTTTTGCAA-AAAAGGCTTTT-TTCCCACCAATTTTTG-TAAAGTCTAAGTTCGTGC-CTTA
66 TTGGTTTCGCAAGAAAA-GCTTTTCTTTCCACC-ATTTTTGATAAA-TCAAAGTTCGT-CTCTTA
* *
736107 AATGA-GACAAACATTGATTC-TAGTAA-AGATCT
127 AAT-ACGACAAACA-TGATACTTA-TAATA-ATCC
* * * ** * * * * * * * *
736139 TCGTTCATTTTGTGATTAGGTA-CTTAAACACATTCTGCTCATTAGAATAAATGATATTGATGAT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
** * * * ** * ** * *
736203 TTTATTTTGCATGGAAATATTTTCTTTACC-CTATTTTTCTTAGAATCAAAGTTCTTCTTTTAAA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTGATA-AATCAAAGTTCGTCTCTTAAA
* * * * * * *
736267 TAAGGCAAGCATCGATTCTCATAATAGTCT
129 TACGACAAACAT-GATACTTATAATAATCC
* * * * * * *
736297 CCATTCTTTTCAAGATT-GAGAAGCAAAAACGCATTC-CCTTCATTAGGATGCATGACATTGATG
1 CCATTCTTTTTAAGATTAG-GCAGCATAAACACATTCTCCTT-ATTAGGATACATCATATTGATG
* * * * *
736360 CTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAAT-AAAGGTTTGTCTCTTA
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATA-AATCAAA-GTTCGTCTCTTA
* * * * *
736424 AATATGACAAACAAGAATACTGATACTAATCA
127 AATACGACAAACATG-ATACTTATAATAATCC
* * * * * * *
736456 CCGTT-TTCTTCAGGATTAGGTC-CCATAAACAGAGTCTTCTTATTAGGATACA-CGATATTGAT
1 CCATTCTT-TTTAAGATTAGG-CAGCATAAACACATTCTCCTTATTAGGATACATC-ATATTGAT
* * * * **
736518 GCTTTGGTTTTGCAAGAAAGGC-TTT-TTTCCCCCAACTTTT-ATAAAGTTTAAGTTCGTGC-CT
63 GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAAA-TCAAAGTTCGT-CTCT
* * * * * **
736579 CAAATGA-GACAAATATGGATTC-CAGTAATGATAT
125 TAAAT-ACGACAAACAT-GATACTTA-TAATAATCC
** * * * * * * *
736613 ATATTC-ATTTAGTGATTTGGCA-CTATAAACTCATTCTCCTCATTAGGATAAATGATATTGATG
1 CCATTCTTTTTA-AGATTAGGCAGC-ATAAACACATTCTCCTTATTAGGATACATCATATTGATG
* ** * * * * * * * * *
736676 ATTTTCTTTTGCATGGAAATCTTTTCTTAGCC-CTATTTTCCTTA-AAATCAAAGTTCATCTTTT
64 CTTTGGTTTCGCAAGAAAAGCTTTTCTT-TCCACCATTTT--TGATAAATCAAAGTTCGTCTCTT
* * * * ** * *
736739 AAATATGGCAAGCATCGATTCTCGTAATAGTCT
126 AAATACGACAAACAT-GATACTTATAATAATCC
* * *
736772 CCATTCTTTTTAAGATTCGGAAGTCA-AAACACGA-TC-CCTTCATTAGGATACATGATATTGAT
1 CCATTCTTTTTAAGATTAGGCAG-CATAAACAC-ATTCTCCTT-ATTAGGATACATCATATTGAT
* **
736834 GCTTTGGTGTC-CTAAGAAAAGCTTTTCTTTTCC-CCATTTTTGATAGAATCAAAGTTTATCTCT
63 GCTTTGGTTTCGC-AAGAAAAGCTTTTC-TTTCCACCATTTTTGATA-AATCAAAGTTCGTCTCT
* * * *
736897 TAAATATGACAAACTTGAATACTCATACTAATCC
125 TAAATACGACAAACATG-ATACTTATAATAATCC
* * * * *
736931 CCATTCTTTTTAGGATTAGGCAGCATAAACATAGTCTTCTTATTAAGATACATCATATTGATGCT
1 CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
* *
736996 TTGGTTTCGCAAGAAAGGCTTTTTTTTCACACCAATTTTTG-TAAA
66 TTGGTTTCGCAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGATAAA
737041 GTCTACGTTC
Statistics
Matches: 7093, Mismatches: 2305, Indels: 1396
0.66 0.21 0.13
Matches are distributed among these distances:
149 4 0.00
150 12 0.00
151 104 0.01
152 79 0.01
153 2 0.00
154 2 0.00
155 7 0.00
156 68 0.01
157 674 0.10
158 1798 0.25
159 3052 0.43
160 904 0.13
161 328 0.05
162 55 0.01
163 3 0.00
164 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.14, T:0.37
Consensus pattern (157 bp):
CCATTCTTTTTAAGATTAGGCAGCATAAACACATTCTCCTTATTAGGATACATCATATTGATGCT
TTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAATCAAAGTTCGTCTCTTAAATA
CGACAAACATGATACTTATAATAATCC
Found at i:731801 original size:953 final size:952
Alignment explanation
Indices: 726505--738667 Score: 14387
Period size: 953 Copynumber: 12.8 Consensus size: 952
726495 CTAATCCCCA
* * *
726505 TTCTTTTTAAGATACATCATATTGATGTTTTGGTTTCGCAAGAAAGGCTTTTTTTCAC-ACCAAT
1 TTCTCTTTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTTC-CTACCAAT
* * *
726569 TTTTGTAAAGTCTAAGTTCGTGCCTCTATTGAGATAAACATGGATTCTAGTAAAGATCTTTTTTC
64 TTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTC
* * *
726634 ATTTTGTGAATAGGTACTATAAACA-GTTCTCCTC-TTCAAGATAAATGATATTGATGATTTTAT
129 ATTTTGTGATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTAT
* * * * **
726697 TTTGCGTGGAAATCTTTTGTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACC
193 TTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGC
* ** * * * * *
726762 AGGCTTCGATTCTCATAATAGCCTCCATTCTTTTTAAGATTGGGAAGCGAACACACTTTCCCTTT
258 AAGCCACGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTT
*
726827 ATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTTAT
323 ATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGAT
* * * **
726892 AGAATCAAAGTTTATCTATTAAATATGACAAACTTGAATACTCATACTAATTTCCGTTCTTTTCA
388 AGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCA
* * * * *
726957 GGATTAGGCACCATAAATGTAGTCTTCTCATTAGGATACATCATATTAACGCTTTGGTTTTGCAG
453 GGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * *
727022 GAAAGGCTTTTTTCATACCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATAAGACAAACATGG
518 GAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
** * * * *
727087 ATTCTAGCGATGATTTTTATACATTTGGTGATTTGGCACTATAAACACATTTTCCTCATTAGGAT
583 ATTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * *
727152 GAATGATATTGATGATTTTCTTTTGTAGGGAAATCTTTTCTTAGCCCTACTTTCCTTAAAACCAA
648 AAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAA
* * * * *
727217 AGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAACATTGGG
713 AGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGG
* * * *
727282 AAGCGAAAACACATTCCCTTCATTAGGCTACATCACATTGATGCTTTGGTGCCGTAAGAAAAGCT
778 AAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCT
* * *
727347 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACTTA
843 TTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCA
* * *
727412 TACTAATCCCCGTTCTTTTTAGGATTAGGCAGCATAAACTTAGTC
908 TACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
*
727457 TTCT-TATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCAC-ACCC
1 TTCTCT-TTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTC-CTACCA
* * ** * * * *
727520 ATTTTTGTACAGTCTAAGTTCGTGCGTGTAGTGAGATAAACATGGATTCTAGTGAAGAACTTTTT
62 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTT
* * * *
727585 TCATTTTTTGAATAGGTGCTATAAACA-ATTCTCCTCTTTAGGATAAATGATATTGATGATTTTA
127 TCATTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTA
* * * * **
727649 TTTTGCATGGAAATCTTTTCTTTACGTTATTTTCCTTAAAA-AAAAGTACATCCTTTAAACAAAC
192 TTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGG
** * * * * * *
727713 CAAGCTTCGATTCTTATAATAGCCCCCATTCTTTTTAAGATTGGGAAGCGAACACACATTCCCTT
257 CAAGCCACGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCCCTT
*
727778 TATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTCGA
322 TATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGA
* * * *
727843 TAAAATCAAAGTTTGTCTCTCAAATACGACAAACATGAATACTCATACTAATCCTCGTTCTTTTC
387 TAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTC
* * * * *
727908 AGGATTAGGCACCACAAATGTAGTCTTCTCATTAGGATACATCATAATGATGCTTTGGTTTTGCG
452 AGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCA
* *
727973 AGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATAAGACAAACATG
517 AGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATG
* * ** * * * *
728038 GATTCTAGTAAAGATCTTTGTTCATTTTCTGATTAGGTACTACAAACACAATCTGCTCATTAGGA
582 GATTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * * *
728103 TAAACGATCTTGATGATTTTATTTTGCATGGAAATCTTTTCTTTA-CCTTATTTTTCTTAAAATC
647 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTAGCCCTATTTTCCTTAAAATC
* * *
728167 AAAGCTAATCCTTTAAATGAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTG
711 AAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTG
* * * *
728232 AGAAGCAAAAACACATTCCCTTCATTAGGATGCAAGATATTGATGCTTTGGTGTCGTAAGAAAAG
776 GGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAG
* * ** * * *
728297 CTTTTCTTTCCATCGTTTGTGGCAGAATCAAAGTTTGTCTCTTAAATACGACACATAAGAATACT
841 CTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACT
* * * * * *
728362 GATAATAATCCCTGTTTTTTTCAAGATTAGGTACCATAAACATA-TAC
906 CATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGT-C
* * **
728409 TTCT-TATTAGGATACA-CA-ATTTGATGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAAT
1 TTCTCT-TTAGGATACATCATA-TTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAAT
* * * *
728471 TTTTATAAAGTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTC
64 TTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTC
* * * *
728536 ATTTAGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTT
129 ATTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATT
* * * *
728601 TTACAATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGGC
194 TTGC-ATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGC
* ** ** *
728666 AA-TCATCGATTCTTGTAATAGTCTTTATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCTT
258 AAGCCA-CGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCCCTT
* * * *
728730 CATTAGGATACATGACATTGACGCTTTGGTGTCATAAGAAAAGCCTTTCTTTTCCACCATTTTTG
322 TATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTC-TTTCCACCATTTTTG
* *
728795 ATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCATTCTTTT
386 ATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTT
* * * * * * *
728860 TAGGATTAGACAGCGTAAACATAGTCTTCTTATTAGGATACATCATATTGATGCTTTAGTTTCGC
451 CAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGC
* * * * *
728925 AAGAAAGGCTTTTTTTTCAC-ACCAAATTTTGTAAAGTTTAAGTTCGTGCCTCTAATGAGATACA
516 AAGAAAGGC--TTTTTTC-CTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAA
* * * ** * * *
728989 TATAGA-TCTAGTAAAT-ATCTTTTTTCATTTTTTGAATAGGTACTATAAACA-AGTCTCCTC-T
578 CATGGATTCTAGT-AATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCAT
* * **
729050 TCAGGATAAATGATATTGATGATTTTATTTTGCGTGGAAATCTTTTCTTTA-CGTTATTTTCCTT
642 T-AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTAGCCCTATTTTCCTT
* * ** * * *
729114 AAAATCAAAGTTCATCCATTAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCCTTTT-
705 AAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATT-CTTTTC
*** * * * * * *
729178 AAGATTGGGAATTGAATACACATTCACTTTATTAGGATACATGAAATTGATTCTTTGGTGTCATA
769 AAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTA
* * * * *
729243 AGAAAAGTTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACAT
834 AGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACAT
* * * * **
729308 GAATACTCACACTAATCCTCGTTCTTTTCAGGATTAGCCACCACAAACGCAGTC
899 GAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * *
729362 TTCTCATTAGGATACATCATATTGATGCTTTGGTTTCACAGGAAAGGCTTTTTTCCTACCAATTT
1 TTCTCTTTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAATTT
* * ** * *
729427 TCGTAAAGTCTAAGTTTGTGAATCAAATGAGACAAACATGGATTCTAGTGAAGATCTTTGTTCAT
66 TTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCAT
* * * * * **
729492 TTTCTGATTAGGTACTACAAACACAATCTGCTCTTTAGGATAAACAATATTGATGATTTTATTTT
131 TTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTT
*
729557 GCATGGAAATCTTTTCTTTACC-TATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG
196 GCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG
** ** * * *
729621 -CATCGATTCTCATACCAGTCTCCATTTTTTCCAAGATTGAGACGCAAAAACATATT-CCTTTCA
261 CCA-CGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTT-A
* * * * * *
729684 TTAGGATGCAAGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCATTTTCGGTA
324 TTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATA
* * * * *
729749 AAATCAAAGTTTATCTCTTAAAAATGACAAACATGAATACTCATACTAATCCTCATTCTTTTCAG
389 GAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAG
* * * * * * *
729814 GATTAGGAACCACAAATGCAGTCTTCTCGTTAGGATACATCATATTGATGCTTTGGTTTTGCAGG
454 GATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAG
* * * *
729879 AAAGGCTTTTTTCCTACCAATTTTCGTAAAGTCTAAGTTTGTGACTCAAATGAGACAAAGATGGA
519 AAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* *
729944 TTCTAGTAATGATCTTTATTCATTTAGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATA
584 TTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * *
730009 AATGTTATTGATGATTTTCTTTTACAATGGAAATCTTTTCTTAGCCTTATTTTCCTTAAAATCAA
649 AATGATATTGATGATTTTCTTTTGC-ATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAA
* * ** *
730074 AGTTCAT-CTATTAAATATGGCAAGCATCAATTCTCGCAATAGTCTCCATTCTTTTTAAGATTGG
713 AGTTCATCCT-TTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGG
* *
730138 GAAGCAAAAACAAATTCCCTTCATTAGGATACATGACATTGATGCTTTGATGTCGTAAGAAAAGC
777 GAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGC
* * *
730203 TTTTTTTTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGATAAACATGAATAC
842 --TTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATAC
* * * * * * * *
730268 TTATTCTAATCCCCGTTCTTTTTAGGATTCGACAGCGTCAACATAGTC
905 TCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
* *
730316 TT-TTTATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCAC-ACCC
1 TTCTCT-TTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTC-CTACCA
* * * * * *
730379 ATTTTTGTAAAGTCTAAGTTCTTGCCTCTAGTGAGATACATATGGATTCTAGTAAAGATCTTTTT
62 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTT
* * * *
730444 TCATTTTTTGAATATGTACTATAAATA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTT
127 TCATTTTGTGATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTT
*
730507 ATTTTGCATGGAAATCTTTTC-TT-CCTGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACA
191 ATTTTGCATGGAAATCTTTTCTTTACC--TTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATA
** ** * * * ** *** * * *
730570 AACCAAGCTTCGATTCTCATAATAGCCCCCAGTCCTTTTAAGATTGGGAATTGAACATACATTCA
254 AGGCAAGCCACGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCC
* * *
730635 CTTTTTTAGGATACATGAAATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTT
319 CTTTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTT
* * * * ** * * * * *
730700 CGATAAAATCAAAGTTTATCTCTTAAAAACAACAAACATGAACACACATACTAATCCTCATGCTT
384 TGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTT
* * * * *
730765 TTCAAGATTAGGCACCACAAATGCAGTCTTCTCTTTAGGATACATCATATTGATGCTTTGGTTTC
449 TTCAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTC
* * * *
730830 GTAGGAAAGGCCTTTTTCCTACCAATTTTCGTAAAGTCTAAGTTCGTGACC-CAAATGAGACAAA
514 GCAAGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTG-CCTCAAATGAGACAAA
* *
730894 CATGGATTCTAGTAATGATCTTTATTCATTTGGTGATTTGGCACTATAAACACATTCTCCTTATT
578 CATGGATTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATT
* * * * *
730959 AGGATGAACGATATTGATGATTTTCTTTTGCACGGAAATCTTCTCCTAGCCCTATTTTCCTTAAA
643 AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAA
* *
731024 ATCAAAGTTCATCCTTTAAATATGGCAAGCATCGATTCTCTTAATAGTCTCCATTCTTTTCAAGA
708 ATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGA
* * * *
731089 TTGAGAAGCAAAAACACATTCCTTTCATTAGGATGCATGACATTGATGCTTTGGGGTCGTAAGAA
773 TTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
*
731154 AAGCTTTTCTTTCCACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAT
838 AAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAT
* *
731219 ACTCAAACTAATCCCCGTTCTTTTCAGGATTAGGCACCAT-AACGTAGTC
903 ACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * *
731268 TCCTCTTTAGGATACATCATATTGACGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTACCAATTT
1 TTCTCTTTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAATTT
* * * * * * **
731333 TTGTGAAGTCTAAGTTCATGACTCAAATGAGACAAACATGGAATCTAGTAATGATATTCATTC-T
66 TTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCAT
* * ** * *
731397 TTTGGTCAGTAGACACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGATTTTCTTT
131 TTT-GTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTT
* * * * * *
731462 TGCATGAAAATCTTTTCTTTGCCCTATTTTTCTTACAATGAAAGTTCATCCTTTAAATAAGGCAA
195 TGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAA
* * * * *
731527 GCCACGATTCTCATAACAGTCTCCAGTTTTTTTTCCATGATTTGGATGCCAAAACACATTCCCTT
260 GCCACGATTCTCATAATAGTCTCCA-TTTTTTTT--AAGATTGGGAAGCAAAAACACATTCCCTT
* * * * ** * * *
731592 TATTAGGGTAAATGACATTGATGCTTCGCG-GTTGTAAAAAAAGCTTTT-TTTGCACCGTTTTTG
322 TATTAGGATACATGAAATTGATGCTTTG-GTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTG
*
731655 ATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAGTCCCCGTTCTTTT
386 ATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTT
* * * *** * * * *
731720 CAAGATTAGACACCATAAACATAGTCTTCTCATTTTAATAGATGATAATGATGCTTTGGTTTTGC
451 CAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGC
* * *
731785 AAGAAAGGTTTTTTTCCCACCAATTTTTTTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
516 AAGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * * * * *
731850 GGATTCTAGTAAAGATCTTCATTCATTTTGTGATCAGGTACTATAAACACATTCTGCTCATTAGG
581 GGATTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* * * * *
731915 ATAAATGATATTGATGATTTTATTTTGCATGAAAATCTTTTCTTTA-TCTTATTTTTCTTAAAAT
646 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTAGCCCTATTTTCCTTAAAAT
* * *
731979 CAAAGTTAATCCTTTAAATAAGGCAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGAGT
710 CAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATT
* **
732044 GAGAAGCAAAAACACATTCCCTTCATTAGGAGGCATGACATTGATGCTTTGGTGTCGTAAGAAAA
775 GGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAA
* * * * * *
732109 GCTTTTCTTTCCATCATTTGTGACAGAATCAAAGTTTGTCTCTTAAATACGACACACAGGAATAC
840 GCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATAC
* * * * * * *
732174 TGATAATAATCCCCATTTTTTTCAAGATTAGGTACCATAAATATAGTC
905 TCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * **
732222 TTCT-TATTAGGATACA-CGAT-TTGAGGCTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAAT
1 TTCTCT-TTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAAT
* * * * *
732284 TTTTATAAAGTCTAAATTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTC
64 TTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTC
* * * * *
732349 ATTTAGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATAAATGTTATTGATGATTTTCTT
129 ATTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATT
* * *
732414 TTACAATGGAAATCTTTTC-TTAGCCTTATTTTCCTTAAAATCAAAGTTCATCTTTTAAATATGG
194 TTGC-ATGGAAATCTTTTCTTTA-CCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGG
* * * *
732478 C-AGGCATCGATTCTCGTAATAGTCTCTATTCTTTTTAAGATTGGGAAGCAAAAACACATTCCCT
257 CAAGCCA-CGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCCCT
* * *
732542 TCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTTCCACCATTTTT
321 TTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTC-TTTCCACCATTTTT
* *
732607 GATAAAATCAAAGTTTGTCTCTTAAATATGACAAATATGAATACTCATACTAATCCCCGTTCTTT
385 GATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTT
* * * * * ** *
732672 TTAGGATTAGACAGCGTCAATATAGTCTTCTTATTAGGATACATCATATTGATGCTTTGGTTTCG
450 TCAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCG
* * * *
732737 CAAGAAAGGCTTTTTTTTCAC-ACCCATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATAC
515 CAAGAAAGGC--TTTTTTC-CTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAA
* * * * ** * *
732801 ATATGGATTCCAGTAAAGATCTTTTTTCATTTTTTGAATAGGTACTATAAACA-ATTCTCCTC-T
577 ACATGGATTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCAT
* ** **
732864 TCAGGATAAATGATATTGATGATTTTATTTTGCGGGGAAATCTTTTCTTTA-CGTTATTTTCCTT
642 T-AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTAGCCCTATTTTCCTT
* * ** * * *
732928 AAAATCAAAGTTTATCCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCCTTTT-
705 AAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATT-CTTTTC
* * * ** *
732992 AAGATTGGGAATCAAACACACATTCACTTTTTTAGGATACATGAAATTGATGCTTTGGTGTCGTA
769 AAGATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTA
* * * *
733057 AGAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACAT
834 AGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACAT
** * * * ***
733122 GAATACAAATACTAATCCTCATTCTTTTCAGGATTAGGCACCACAAATGCAGTC
899 GAATACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * *
733176 TTCTCATTAGGATACATAATATTGATGCTTTGGTTTCGCAGGAAAGGCTTTTTTCCTACCAATTT
1 TTCTCTTTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAATTT
* * * * *
733241 TCGTAAAGTCTAAGTTTGTGACTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTATTCAT
66 TTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCAT
* * * * * *
733306 TTGGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATGAACGATATTGATGATTTTCTTTT
131 TTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTT
* * * *
733371 GCATGGAAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATATGGCAAG
196 GCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG
* * * *
733436 -CATCGATTCTCTTAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACACATT-CCTTTCA
261 CCA-CGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTT-A
* * * *
733499 TTAGGATGCATGACATTGATGCTTTGGTGTCATGAGAAAAGCTTTTCTTTCCACCGTTTTTGATA
324 TTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATA
* * * * *
733564 GAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATACTTATACTAATCCCCATTCATTTCAG
389 GAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAG
* * * * *
733629 GATTAGGCATCATAAACTTAGTCTTCTTATTAGGATACATTATATTGAAGCTTTGGTTTCGCAAG
454 GATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAG
* * * * *
733694 AAAGGCTTTTTTTTCAC-CCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGAGATACATAT
519 AAAGGC--TTTTTTC-CTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * ** * *
733758 GGATTCTAGTAAAGATCTTTTTTCATTTTTTGAATAGGTACTATAAACA-ATTCTCCTC-TTCAG
581 GGATTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATT-AG
* * * *
733821 GATAAATAATATTGATGATTTTATTTTGCTTGGAAATCTTTTCTTTA--CGTGATTTTCCTTAAA
645 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TTAGCCCT-ATTTTCCTTAAA
* * * ** * * *
733884 ATCAAAGTTTATTCTTTAAACAAACCAAGCTTCGATTCTCATAATAGCCCCCATTCCTTTT-AAG
708 ATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATT-CTTTTCAAG
* * * ** *
733948 ATTGGGAATCAAACACACATTCACTTTTTTAGGATACATGAAATTGATGCTTTGGTGTCGTAAGA
772 ATTGGGAAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGA
* * *
734013 AAAGCTTTTCTTTCCACCGTTTTTGATAAAATCAAAGTTTATCTCTTAAAAACGACAAACATGAA
837 AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAA
* * * * * ***
734078 TACTCATGCTAATCCTCATTCTTTTCGGGATTAGGCACCACAAATGCAGTC
902 TACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * *
734129 TTCTCATTAGGATATATCATATTGATGCTTTGGTTTCGTAGGAAAGGCTTTTTTCCTACCAATTT
1 TTCTCTTTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAATTT
* * * * * * *
734194 TCGTAAACTCTAAGTTCAT---T---TTGTGATAAACATGGATTCTAGAAAAGATCTTTTTTCAT
66 TTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCAT
*
734253 TTTGTGATTAGGTACTACAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTT
131 TTTGTGATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTT
* * * * **
734316 TGCGTGGAAAT-TTTTCTTCACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAA
195 TGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAA
** * * * * * *
734380 GCTTCGATTCACATAATAGCCTCCATTCTTTTTT-AGATTGAGAACCGAACACACATTCCCTTTA
260 GCCACGATTCTCATAATAGTCTCCATT-TTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTTA
* * * *
734444 TTAGGATCCACGAAATTGATGCTTTGGTGTCATAAGAAACGCTTTTCTTTCCACCATTTTTTATA
324 TTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATA
* * *
734509 GAATCAAAGTTTATCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAA
389 GAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAG
* * *
734574 GATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGCTTCACAGG
454 GATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAG
* * *
734639 AAAGGCTTTTTTCCTACCAATTTTTGTAAAGTTTAAGTTCTTGACTCAAATGAGACAAACATGGA
519 AAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * * * * *
734704 TTCTAGTAATGATCTTCATTCTTTTGCTCATTAGGCGCTATAAACACATTCTCCTCAATAGGATA
584 TTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * *
734769 AATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCTAT
649 AATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAA
* * * ** * * *
734834 GCTCATCTTTTAAATAAGGCAAGCCTCGATTCTTGTAA-CGATCTCCATTCTTTTCATGATTTGG
714 GTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAG-TCTCCATTCTTTTCAAGATTGGG
* * * * * * * * *
734898 ATGCCAAAACACATTTCCTTCGTTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCT
778 AAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCT
* * *
734963 TTTCTTTCCACCGTTCTTGATAGAATCAAAGTTTTTCTCTTAAATATGACAAACATGAATACTCA
843 TTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCA
* * * ***
735028 TGCTAATCCTCC-TTCTTTTCGGGATTAGGCACCACAAATGCAGTC
908 TACTAATCC-CCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * *
735073 TTCTCATTAGGATATATCATATTGATGCTTTGGTTTCGTAGGAAAGGCTTTTTTCCTACCAATTT
1 TTCTCTTTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAATTT
* * * * * * *
735138 TCGTAAACTCTAAGTTCAT---T---TTGTGATAAACATGGATTCTAGAAAAGATCTTTTTTCAT
66 TTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCAT
*
735197 TTTGTGATTAGGTACTACAAACA-ATTCTCCTC-TTCAGGATAAATGATATTGATGATTTTATTT
131 TTTGTGATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTTATTT
* * * * **
735260 TGCGTGGAAAT-TTTTCTTCACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAACCAA
195 TGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAA
** * * * * * *
735324 GCTTCGATTCACATAATAGCCTCCATTCTTTTTT-AGATTGAGAACCGAACACACATTCCCTTTA
260 GCCACGATTCTCATAATAGTCTCCATT-TTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTTA
* * * *
735388 TTAGGATCCACGAAATTGATGCTTTGGTGTCATAAGAAACGCTTTTCTTTCCACCATTTTTTATA
324 TTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATA
* * *
735453 GAATCAAAGTTTATCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAA
389 GAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAG
* * *
735518 GATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGCTTCACAGG
454 GATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAG
* * *
735583 AAAGGCTTTTTTCCTACCAATTTTTGTAAAGTTTAAGTTCTTGACTCAAATGAGACAAACATGGA
519 AAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * * * * *
735648 TTCTAGTAATGATCTTCATTCTTTTGCTCATTAGGCGCTATAAACACATTCTCCTCAATAGGATA
584 TTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * *
735713 AATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCTAT
649 AATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAA
* * * ** * * *
735778 GCTCATCTTTTAAATAAGGCAAGCCTCGATTCTTGTAA-CGATCTCCATTCTTTTCATGATTTGG
714 GTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAG-TCTCCATTCTTTTCAAGATTGGG
* * * * * * * * *
735842 ATGCCAAAACACATTTCCTTCGTTAGGGTAAATGACATTGATGCTTTGGGGTTGCAAGAAAAGCT
778 AAGCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCT
* * *
735907 TTTCTTTCCACCGTTCTTGATAGAATCAAAGTTTTTCTCTTAAATATGACAAACATGAATACTCA
843 TTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCA
* * *
735972 TACTAGTCCCCGTTCTTTTCAAGATTAGGCACCATAAGCATAGTC
908 TACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * * * * * * *
736017 TTCTCATTCGAATGCATCATAATGATGCTTTTGTTTTGCAAAAAAGGCTTTTTTCCCACCAATTT
1 TTCTCTTTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAATTT
* * **
736082 TTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATTGATTCTAGTAAAGATCTTCGTTCAT
66 TTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCAT
* *
736147 TTTGTGATTAGGTACT-TAAACACATTCTGCTCATTAGAATAAATGATATTGATGATTTTATTTT
131 TTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTT
* * * * * *
736211 GCATGGAAATATTTTCTTTACCCTATTTTTCTTAGAATCAAAGTTCTTCTTTTAAATAAGGCAAG
196 GCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG
* * * * *
736276 -CATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGAGAAGCAAAAACGCATTCCCTTCAT
261 CCA-CGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTTAT
* * * * *
736340 TAGGATGCATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAG
325 TAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATAG
* * *
736405 AAT-AAAGGTTTGTCTCTTAAATATGACAAACAAGAATACTGATACTAATCACCGTT-TTCTTCA
390 AATCAAA-GTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTT-TTCA
* *
736468 GGATTAGGTC-CCATAAACAG-AGTCTTCTTATTAGGATACA-CGATATTGATGCTTTGGTTTTG
453 GGATTAGG-CACCATAAAC-GTAGTCTTCTCATTAGGATACATC-ATATTGATGCTTTGGTTTCG
* * * * *
736530 CAAGAAAGGCTTTTTTCC-CCCAACTTTTATAAAGTTTAAGTTCGTGCCTCAAATGAGACAAATA
515 CAAGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
* * * * * *
736594 TGGATTCCAGTAATGATATATATTCATTTAGTGATTTGGCACTATAAACTCATTCTCCTCATTAG
580 TGGATTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATTAG
736659 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAAT
645 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAAT
* * * *
736724 CAAAGTTCATCTTTTAAATATGGCAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTTAAGATT
710 CAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATT
* * *
736789 CGGAAGTC-AAAACACGA-TCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTCCTAAGAA
775 GGGAAG-CAAAAACAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
* * * *
736852 AAGCTTTTCTTTTCC-CCATTTTTGATAGAATCAAAGTTTATCTCTTAAATATGACAAACTTGAA
838 AAGCTTTTC-TTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAA
* * *
736916 TACTCATACTAATCCCCATTCTTTTTAGGATTAGGCAGCATAAACATAGTC
902 TACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
*
736967 TTCT-TATTAAGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTTCAC-ACCA
1 TTCTCT-TTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTTTTTC-CTACCA
* * * * * *
737030 ATTTTTGTAAAGTCTACGTTCGTGCATCTATTGAGATAAACATAGATTCTAGTAAAGATCTTTTT
62 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTT
* * * *
737095 TCATTTTGTGAATAAGTACTATAAACA-GTTCTCCTC-TTCAAGATAAATGATATTGATGATTTT
127 TCATTTTGTGATTAGGTACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGATTTT
* * * *
737158 ATTTTGCGTGGAAATCTTTTCTTTACGTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAACAAA
191 ATTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAG
* * ** * * * * * *
737223 CCAGGCTTCGATTCTCATAATAGCCTCCATTCTTTCTAAGATTGGGAAGCGAACACACTTTCCCT
256 GCAAGCCACGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCCCT
* *
737288 TTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCCTTTTTT
321 TTATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTG
* * * *
737353 ATAGAATCAAAGTTTATCTATTAAATATGACAAACTTGAATACTCATACTAATCTCCGTTCTTTT
386 ATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTT
* *
737418 CAGGATTAGGCACCATAAATGTAGTCTTCTCATTAGGATACATCATATTAATGCTTTGGTTTCGC
451 CAGGATTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGC
* * * * *
737483 AGGAAAGGCTTTTTTCGTACCAATTTTTATAAAGTCTAAGTTTGTGACTCAAATGAGACAAACAT
516 AAGAAAGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * * * * * *
737548 AGATTCTAGTAATGATCTTCATTCTTTTGGTCATTAGGCACTGTAAGCACATTCTCCTCAGTAGG
581 GGATTCTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* *
737613 ATAAATGATATTGATTATTTTCTTTTGCAT-GACAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
646 ATAAATGATATTGATGATTTTCTTTTGCATGGA-AATCTTTTCTTAGCCCTATTTTCCTTAAAAT
** * * * * * * * *
737677 CAAAGTTCATCCTTTAAATAAGGCCTTGCCTCGATTCCCGTGAGAATCTCCATTTTTTTCATGAT
710 CAAAGTTCATCCTTTAAATAAGG-CAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGAT
* * ** * * ** * * *
737742 T-TGAATGCGAAAACACATTCGTTTCATTAGGGTAAACAACATTGATGCTTTGGGGTTGCAAGAA
774 TGGGAA-GCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
* * * *
737806 AAGCTTTTCTTTTCACTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACCTGAAT
838 AAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAT
* * *
737871 ACTCATACTAATCCCTGTTCATTTCAGGATTAGGCTCCATAAACATAGTC
903 ACTCATACTAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * *
737921 TTCTCGTTAGGATACATCATATTGATGCTTCGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTT
1 TTCTCTTTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAATTT
* * * **
737986 TTGTAAAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGGAATGATCTTCATTCAT
66 TTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCAT
* * * * * *
738051 TTGGTGATTTA-GCACTATAAACACATTCTTCTCATTAGGATAAAAGATATTGACGATTTTCTTT
131 TTTGTGA-TTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTT
* * * * * *
738115 TGCATGGAATTCTTTTCTTTGTCC-TATTTTTCTTAAAATTAAAGTTCATCCCTTAAATATGGCA
195 TGCATGGAAATCTTTTCTTT-ACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCA
* * * * ** **
738179 AG-CATCGATTCTCATAACAGTCTCCCTTCTTTTCAAG-TTCGAAAAGTTAAAACACATTCCCTT
259 AGCCA-CGATTCTCATAATAGTCTCCATTTTTTTTAAGATT-GGGAAGCAAAAACACATTCCCTT
* * * * * ** * *
738242 CATTAGGATGCATGATATTGAAGCTTTAGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTAA
322 TATTAGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGA
* * * * * *
738307 AAGAATCCAAGTTTGTCTCTTAAATAAGACAAACAGGAATACTCATAGTAATCCCCATTCTTTTC
387 TAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTC
* * * * *
738372 AGGATT-GAGCACCATAAACATAGTTTTCCCATTAGGAAACA-CGATATTGATGCTTTGGTTTTG
452 AGGATTAG-GCACCATAAACGTAGTCTTCTCATTAGGATACATC-ATATTGATGCTTTGGTTTCG
** * * * * * *
738435 CAAGAAAGGCTTTTTTCCCCCCCAATATTTGTAAAGTCTAAGTTCATACCTTAAATGAGTCAAAT
515 CAAGAAAGGCTTTTTT-CCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAAC
* * *
738500 ATGGATTCTAGTAATAATCTTCT-TTCATTTGGTGATTTGGCACTATAAACACATTCTCTTCATT
579 ATGGATTCTAGTAATGATCTT-TATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATT
* * *
738564 AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAAA
643 AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAA
* *
738629 ATCAAAGTTCATCCCTTAAA-AAAGCAAGCATCGATTCTC
708 ATCAAAGTTCATCCTTTAAATAAGGCAAGCATCGATTCTC
738668 GTAACTGATG
Statistics
Matches: 9803, Mismatches: 1261, Indels: 294
0.86 0.11 0.03
Matches are distributed among these distances:
942 1 0.00
943 95 0.01
944 1262 0.13
945 271 0.03
946 53 0.01
947 53 0.01
948 2 0.00
949 142 0.01
950 653 0.07
951 699 0.07
952 1630 0.17
953 2627 0.27
954 1308 0.13
955 515 0.05
956 486 0.05
957 6 0.00
ACGTcount: A:0.30, C:0.18, G:0.14, T:0.38
Consensus pattern (952 bp):
TTCTCTTTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCTACCAATTT
TTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTTTTTCAT
TTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTT
GCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG
CCACGATTCTCATAATAGTCTCCATTTTTTTTAAGATTGGGAAGCAAAAACACATTCCCTTTATT
AGGATACATGAAATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGA
ATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCGTTCTTTTCAGGA
TTAGGCACCATAAACGTAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAA
AGGCTTTTTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATT
CTAGTAATGATCTTTATTCATTTGGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAA
TGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAGCCCTATTTTCCTTAAAATCAAAGT
TCATCCTTTAAATAAGGCAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAAG
CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTT
CTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATAC
TAATCCCCGTTCTTTTCAGGATTAGGCACCATAAACATAGTC
Found at i:742970 original size:15 final size:15
Alignment explanation
Indices: 742950--742990 Score: 55
Period size: 15 Copynumber: 2.7 Consensus size: 15
742940 ATTCATCAAA
742950 TTCATTTGGAGCTTC
1 TTCATTTGGAGCTTC
*
742965 TTCATTTTGAGCTTC
1 TTCATTTGGAGCTTC
*
742980 CTCAATTTGGA
1 TTC-ATTTGGA
742991 CACTTTTGTC
Statistics
Matches: 22, Mismatches: 3, Indels: 1
0.85 0.12 0.04
Matches are distributed among these distances:
15 16 0.73
16 6 0.27
ACGTcount: A:0.17, C:0.20, G:0.17, T:0.46
Consensus pattern (15 bp):
TTCATTTGGAGCTTC
Found at i:746733 original size:13 final size:13
Alignment explanation
Indices: 746715--746740 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
746705 TACACCAAGT
746715 ATGTATCGATACA
1 ATGTATCGATACA
746728 ATGTATCGATACA
1 ATGTATCGATACA
746741 CAAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:746738 original size:32 final size:33
Alignment explanation
Indices: 746697--746760 Score: 94
Period size: 32 Copynumber: 2.0 Consensus size: 33
746687 TAGCCAAACT
* **
746697 TGTATCGATACACCAAGTA-TGTATCGATACAA
1 TGTATCGATACACAAAAAATTGTATCGATACAA
746729 TGTATCGATACACAAAAAATTGTATCGATACA
1 TGTATCGATACACAAAAAATTGTATCGATACA
746761 TTGACTTGTA
Statistics
Matches: 28, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
32 16 0.57
33 12 0.43
ACGTcount: A:0.41, C:0.17, G:0.14, T:0.28
Consensus pattern (33 bp):
TGTATCGATACACAAAAAATTGTATCGATACAA
Found at i:752730 original size:13 final size:13
Alignment explanation
Indices: 752714--752739 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
752704 AATGATGCTG
752714 TTAATGAATGATT
1 TTAATGAATGATT
752727 TTAATGAATGATT
1 TTAATGAATGATT
752740 ATGTGTTTTT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.00, G:0.15, T:0.46
Consensus pattern (13 bp):
TTAATGAATGATT
Found at i:752920 original size:13 final size:13
Alignment explanation
Indices: 752902--752940 Score: 60
Period size: 13 Copynumber: 3.0 Consensus size: 13
752892 ACATTTTTCT
*
752902 TTGTATTGATACA
1 TTGTATCGATACA
752915 TTGTATCGATACA
1 TTGTATCGATACA
*
752928 CTGTATCGATACA
1 TTGTATCGATACA
752941 GGGGGATTAT
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
13 24 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:755517 original size:13 final size:13
Alignment explanation
Indices: 755499--755524 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
755489 TACACCAAGT
755499 ATGTATCGATACA
1 ATGTATCGATACA
755512 ATGTATCGATACA
1 ATGTATCGATACA
755525 CAAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:758942 original size:475 final size:475
Alignment explanation
Indices: 756999--760807 Score: 4777
Period size: 475 Copynumber: 8.0 Consensus size: 475
756989 GATCCTAACA
* *
756999 TTTTGGTTCCCAACCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATCTAAGG
1 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
** * * * * *
757064 GTCAAACTTCAACTTAAACGAAAATAGGGCAAAAAGAAGATTTCCATGCCAAAGAAAACCATCAA
66 GTCAAACTTTGATTTTAAGGAAAATAGGGCAAGAA-AAGATTTCCACGCCAAAGAAAACCATCAA
* ** **
757129 TATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATGACAAAATGAATGAAGATC-TT
130 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATT
* ** * * * * * *
757193 -TACCAGAATCAATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAATTGGTGGGAAG
195 GT-TC-GAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAG
* * * * * *
757257 AAGGCGTTTCTTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAAAAGATTATGTTTATGG
258 AAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGG
* * *
757322 TGCCTAATCCTGAAAAGAATGGGGATTAGCATGAGTATTCATGTTTGTCTTATTTAAGAGATAAA
323 TACCTAATCCTGAAAAGAATGGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAAA
* * * *
757387 CTTTGATTCTATCAATAACAGTGGAAAAAAAAGCTTTTCTTGCAACACCAAATCATCAATGTCAT
388 CTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCAT
* *
757452 GTATCTTAATGAAGGGAATGTAT
453 GTATCCTAATGAAGGGAATGTGT
* * * * * * *
757475 TTTTCGTTCCTAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACATGTCTTATTTAAGG
1 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
* * * * *
757540 GCCAAACATTGATTTTAAGGAAAATAGGGCAAAGAAATGATTTCAATGCCAAAGAAAACCATCAA
66 GTCAAACTTTGATTTTAAGGAAAATAGGGC-AAGAAAAGATTTCCACGCCAAAGAAAACCATCAA
* * * * *
757605 TAACATTTATCCTAATAAAGAGAATGTGTTTATAGTG-CTCGATCTCAAAACAAATGAAGATCAT
130 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT-AATCTCAAAACCAATGAAGATCAT
* * * * *
757669 TGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGA
194 TGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGA
* * * * * * * * * * *
757734 AACCGTTTCTTGCAAAATCAAAGCAACAATATCGTGTATCCTTAAGCGAAGACTATGATTGTGGC
259 AAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGT
* * * ** *
757799 GCCTAAT-CTGAAAATCAGTGGGGATTAGTATGAGCATTCAAATTTGTCTTTTTTAAGAGATAAA
324 ACCTAATCCTGAAAA-GAATGGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAAA
* ** *
757863 CTTTGATTCTATCAATAACAGTGGAAA-AAAAGGTTCTCTCGCAACAATAAAGCATCAATGTCAA
388 CTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCAT
* * *
757927 GTATCCTTATGAAGGGAGTGTGC
453 GTATCCTAATGAAGGGAATGTGT
*
757950 TTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
1 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
* * * *
758015 GTCAAAGTTTGATTTTAAGGAAAATATGGCAAAGAAAAGATTTCCACGCCAAAGGAATCCATCAA
66 GTCAAACTTTGATTTTAAGGAAAATAGGGC-AAGAAAAGATTTCCACGCCAAAGAAAACCATCAA
* * *
758080 TACCA-TTATCCTAATGAGGAAAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATT
130 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATT
* * **
758144 GCTCGAACCCTTGCATGTCTCTTTTGAGGCAT--ACTTAGGCTTTTCAAAAATTGGTGGGAAGAA
195 GTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAA
* * * ** *
758207 AGGGTTTCTGGTGAAAAGAAATCATCAATACCATGTATCCTTATGAGAAGAAC-ATGTTTATGGT
260 AGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGT
* * *
758271 ACCTAATCCTGAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAAC
324 ACCTAATCCTGAAAAGAATGGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAAAC
* * * * *
758336 TTTGATTCTATCAATAACGGAGG-ACGAAAAGCTTCTCTCGTAACACCAAAGCATCAGTGTCATG
389 TTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATG
*
758400 TATCCTAATGAAGGGAATGTGG
454 TATCCTAATGAAGGGAATGTGT
* * *
758422 TTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGTCTCATTTATGG
1 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
* * * *
758487 GTCTAAGTTTGATTTTAAGGAAAATAAGGCTAAGAAAAGATTTCCACGCCAAAGGAAACCATCAA
66 GTCAAACTTTGATTTTAAGGAAAATAGGGC-AAGAAAAGATTTCCACGCCAAAGAAAACCATCAA
* * **
758552 TATCATTTATCCTAATGAGGAGAATATGTTTATAGTCCCTAATCTCAAAACCAATCCAGATCATT
130 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATT
* * *
758617 GTTCGAATCCTTGTTTATCTAC-TTTGAGGCATGAACTTAGGGTTTTCAAAAATTGGTGGGAAAA
195 GTTCGAATCCTTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGA
* * * *
758681 AAGTGTTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGAACACTATCTTTATGGT
259 AAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGT
* * *
758746 ACCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATATTTGTTTTATTTAAGAGATAAA
324 ACCTAATCCTGAAAAGAATGGGGATTAG-TATGAGCATTCATGTTTGTCTTATTTAAGAGATAAA
* * * *
758810 CTTTGATTCTATCAATAACAGTAGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
388 CTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCAT
* * *
758875 GTATCTTAAGGAAGGGAATAT-T
453 GTATCCTAATGAAGGGAATGTGT
** * * * * * * * *
758897 TTTTCATTCCTAATCTTCAAAAGATTAGAGACTATTACGAGAATCAATACTTGTCTTATTTAAGG
1 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
* * * *
758962 GCCAAACATTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCAAAGAAAACCATCAA
66 GTCAAACTTTGATTTTAAGGAAAATAGGGC-AAGAAAAGATTTCCACGCCAAAGAAAACCATCAA
* * ** * * *
759027 TAACATTTATCCTAATAAAAAGAATGTGTTTATAGTG-CTCGATCTCAAAACAAATGGAGATCAT
130 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT-AATCTCAAAACCAATGAAGATCAT
* * * * *
759091 TGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGA
194 TGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGA
* * * * * * * *
759156 AACCGTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGC
259 AAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGT
* * * * * *
759221 GCCTAAT-CTGGAAATGAGTGGGGATTAGTATGAGCATTAAAGTTTGTCTTTTTTAAGAGATAAA
324 ACCTAATCCT-GAAAAGAATGGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAAA
* * *
759285 CTTTGATTCTATCAATAACGGTGGAAA-AAAAGGTTCTCTCGCAACACTAAAGCATCAATGTCAT
388 CTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCAT
*
759349 GTATCCTAATGAAGGGAGTGTGT
453 GTATCCTAATGAAGGGAATGTGT
*
759372 TTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
1 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
* * *
759437 GTCAAAGTTTGATTTTAAGGAAAATATGGCAAGGAAAAGATTTCCACGCCAAAGGAAACCATCAA
66 GTCAAACTTTGATTTTAAGGAAAATAGGGCAA-GAAAAGATTTCCACGCCAAAGAAAACCATCAA
* *
759502 TA-CAATTATCCTAATGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATT
130 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATT
**
759566 GTTCGAATCCTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAA
195 GTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAA
* * * ** * * *
759631 AGTGTTTCTGGTGAAAAGAAATCATCAATACCATGTATCCTTTTGAGAAGAAC-AAGTTTATGGT
260 AGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGT
* * *
759695 ACCTAATCCTGAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAAC
324 ACCTAATCCTGAAAAGAATGGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAAAC
* * * * * *
759760 TTTGATTCCATCAATAACGGAGG-ACGAAAAACTTCTCTCGCAACACCAAAGCATCAGTGTCATG
389 TTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATG
*
759824 TATCCTAATGAAGGGAATGTGG
454 TATCCTAATGAAGGGAATGTGT
* * *
759846 TTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGTCTCATTTATGG
1 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
* * *
759911 GTCTAAGTTTGATTTTAAGGAAAATAGGGCTAAGAAAAAGATTTCCACGCCAAAGGAAACCATCA
66 GTCAAACTTTGATTTTAAGGAAAATAGGGC-AAG-AAAAGATTTCCACGCCAAAGAAAACCATCA
* * **
759976 ATATCATTTATCTTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAATCCAGATCAT
129 ATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCAT
*
760041 TGTTCGAATCCTTGTTTATCTAC-TTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAG
194 TGTTCGAATCCTTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAG
* * * *
760105 AAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGCACCCTTATGAGAACACTATGTTTATGG
258 AAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGG
* * *
760170 TACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAA
323 TACCTAATCCTGAAAAGAATGGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAAA
* * * * * * * *
760235 CCTTGATTCTACCAATAACGGTGG-AAGAAAAGCTTCTCTTGCGACAACAAAGCATCAAAGTCAG
388 CTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCAT
*
760299 GTATCCTAATGAAGGGAAAGTGT
453 GTATCCTAATGAAGGGAATGTGT
760322 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
1 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
* * ** * *
760387 GTCAAACTTCGATTTAAACAAAAATAGGGCAAAAAGAAGATTTCCATGCCAAAGAAAACCATCAA
66 GTCAAACTTTGATTTTAAGGAAAATAGGGCAAGAA-AAGATTTCCACGCCAAAGAAAACCATCAA
* ** **
760452 TATCATTTATCCTAATGAGCG-GAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-T
130 TATCATTTATCCTAATGAG-GAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCAT
* ** * * * * * * *
760515 T-TACCAGAATCAATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTGGTGGGAA
194 TGT-TC-GAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAA
* * * *
760579 GAAAGCGTTTCTTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATG
257 GAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATG
* * * *
760644 GTGCCTAATCCTGAAAAGAATGGGGATTAGCATGAGTATTCATGTTTGCCTTATTTAAGAGATAA
322 GTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAA
* * * * * *
760709 AATTTGACTCTATTAATAACAGTGGAAAGAAAAGCTTTTCTTGCAACACCAAACCATCAATGTCA
387 ACTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCA
* *
760774 TGTATCTTAATGAAGGGAATGTAT
452 TGTATCCTAATGAAGGGAATGTGT
*
760798 TTTTCGTTCC
1 TTTTGGTTCC
760808 TCATCTTTGT
Statistics
Matches: 2865, Mismatches: 431, Indels: 74
0.85 0.13 0.02
Matches are distributed among these distances:
471 1 0.00
472 322 0.11
473 89 0.03
474 516 0.18
475 1095 0.38
476 833 0.29
477 8 0.00
478 1 0.00
ACGTcount: A:0.35, C:0.15, G:0.19, T:0.31
Consensus pattern (475 bp):
TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGG
GTCAAACTTTGATTTTAAGGAAAATAGGGCAAGAAAAGATTTCCACGCCAAAGAAAACCATCAAT
ATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTG
TTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAA
GCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTAC
CTAATCCTGAAAAGAATGGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAAACTT
TGATTCTATCAATAACAGTGGAAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTA
TCCTAATGAAGGGAATGTGT
Found at i:761049 original size:21 final size:21
Alignment explanation
Indices: 761016--761056 Score: 57
Period size: 21 Copynumber: 2.0 Consensus size: 21
761006 CTAAGTAAAA
761016 ATACGTATTGTATCAATACAT
1 ATACGTATTGTATCAATACAT
*
761037 ATAC-TATTGGTATTAATACA
1 ATACGTATT-GTATCAATACA
761057 CAAGGTTGAC
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
20 4 0.22
21 14 0.78
ACGTcount: A:0.39, C:0.12, G:0.10, T:0.39
Consensus pattern (21 bp):
ATACGTATTGTATCAATACAT
Found at i:761121 original size:20 final size:19
Alignment explanation
Indices: 761096--761166 Score: 70
Period size: 20 Copynumber: 3.6 Consensus size: 19
761086 ACCCTGAAAA
761096 GTATCGATACACATTTAAAT
1 GTATCGATACACA-TTAAAT
* **
761116 GTATCGATACAAATTGCAT
1 GTATCGATACACATTAAAT
**
761135 AGTATCGATACACACAAATAT
1 -GTATCGATACACATTAA-AT
761156 GTATCGATACA
1 GTATCGATACA
761167 GGACTTTGGC
Statistics
Matches: 41, Mismatches: 8, Indels: 4
0.77 0.15 0.08
Matches are distributed among these distances:
19 4 0.10
20 35 0.85
21 2 0.05
ACGTcount: A:0.41, C:0.17, G:0.13, T:0.30
Consensus pattern (19 bp):
GTATCGATACACATTAAAT
Found at i:761213 original size:19 final size:19
Alignment explanation
Indices: 761189--761272 Score: 63
Period size: 19 Copynumber: 4.6 Consensus size: 19
761179 TAGCCAAATT
761189 TGTATCGATACACACAATA
1 TGTATCGATACACACAATA
** *
761208 TGTATCGATACAGGTC-ATT
1 TGTATCGATACA-CACAATA
*
761227 TGTA--G-TAGC-CA-AATT
1 TGTATCGATA-CACACAATA
*
761242 TGTATCGATACACAAAATA
1 TGTATCGATACACACAATA
761261 TGTATCGATACA
1 TGTATCGATACA
761273 TTGGAAGTAG
Statistics
Matches: 51, Mismatches: 6, Indels: 16
0.70 0.08 0.22
Matches are distributed among these distances:
15 7 0.14
16 2 0.04
17 4 0.08
18 4 0.08
19 33 0.65
20 1 0.02
ACGTcount: A:0.37, C:0.17, G:0.15, T:0.31
Consensus pattern (19 bp):
TGTATCGATACACACAATA
Found at i:761219 original size:53 final size:53
Alignment explanation
Indices: 761136--761272 Score: 222
Period size: 53 Copynumber: 2.6 Consensus size: 53
761126 AAATTGCATA
761136 GTATCGATACACACAAATATGTATCGATACAGGAC-TTTGGCAGTAGCCAAATTT
1 GTATCGATACACAC-AATATGTATCGATACAGGACATTT-GCAGTAGCCAAATTT
* *
761190 GTATCGATACACACAATATGTATCGATACAGGTCATTTGTAGTAGCCAAATTT
1 GTATCGATACACACAATATGTATCGATACAGGACATTTGCAGTAGCCAAATTT
*
761243 GTATCGATACACAAAATATGTATCGATACA
1 GTATCGATACACACAATATGTATCGATACA
761273 TTGGAAGTAG
Statistics
Matches: 79, Mismatches: 3, Indels: 3
0.93 0.04 0.04
Matches are distributed among these distances:
53 62 0.78
54 17 0.22
ACGTcount: A:0.36, C:0.18, G:0.17, T:0.29
Consensus pattern (53 bp):
GTATCGATACACACAATATGTATCGATACAGGACATTTGCAGTAGCCAAATTT
Found at i:761315 original size:10 final size:10
Alignment explanation
Indices: 761296--761326 Score: 53
Period size: 10 Copynumber: 3.1 Consensus size: 10
761286 AATCTGATTT
761296 TCACTGTTCA
1 TCACTGTTCA
*
761306 TCACTATTCA
1 TCACTGTTCA
761316 TCACTGTTCA
1 TCACTGTTCA
761326 T
1 T
761327 GTATCGATAC
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
10 19 1.00
ACGTcount: A:0.23, C:0.29, G:0.06, T:0.42
Consensus pattern (10 bp):
TCACTGTTCA
Found at i:761433 original size:13 final size:13
Alignment explanation
Indices: 761415--761440 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
761405 ACATATTTGT
761415 GTGTATCGATACA
1 GTGTATCGATACA
761428 GTGTATCGATACA
1 GTGTATCGATACA
761441 TCATAAATAG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.23, T:0.31
Consensus pattern (13 bp):
GTGTATCGATACA
Found at i:764256 original size:475 final size:474
Alignment explanation
Indices: 762237--787365 Score: 32043
Period size: 475 Copynumber: 52.9 Consensus size: 474
762227 TTTGAGCTCA
* * * * **
762237 CAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGG-CTAAACAT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTC-AAAGTT
* * * * * *
762301 TGACTTTAAGGAAAATAGGGTAAGGAAAAGATTTCAATGCCAAAGAAAACCATCAATAACATTTA
65 TGATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * ** *
762366 CCCTAATAAAGAGAATGTGTTTATAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * ** * * * **
762431 CTTGTTTGTCTCTTTTGAGGGACGAAAATAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * * *
762496 TGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGG-AGCCTAAT-C
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTA-CCTAATCC
* ** * *
762559 TGGAAATGAGCGGGGATTAGTATGAGCATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATTC
323 T-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTC
* * *
762623 TATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGCACCAATGTCATTTATCCTAAT
387 TATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* *
762688 GAAGGTAGTGTGTTTTTGGTTCC
452 GAAGGGAATGTGTTTTTGGTTCC
* * * *
762711 CAATCTTGAAGAGAATGGAGACTTTGATGACAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * *
762776 GATTTTAAGGAAAATATGGCAAAGAAAAGATTTTCACGACAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* ** ** *
762841 CCTAATAAGGAGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-TT-TACGAGAAT
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTC--GAAT
** * * * * * * * *
762904 CAATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTGGTGGGAAGAAAGCGTTTC
193 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* * * * *
762969 TTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATGGTCCCTAATCC
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
** * * * *
763034 TGAAAAGAATAAGGATTAGCATGAGTATTCATGTTTGCCTTATTTAAGAGATAAAATTTGATTCA
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * * * * * *
763099 ATCAATAACAGTGGAAAAGAAAGCTTTTCTTGCAACACCAAACCATCAACGTCATGTATCTTAAT
388 ATCAATAACGGTGGAAGA-AAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* *
763164 GAAGGGAATGTATTTTTCGTTCC
452 GAAGGGAATGTGTTTTTGGTTCC
* * * * * * **
763187 TAATCTTGAAAAGATTGGAGACTATTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * * * * *
763252 GACTTTAAGGAAAATAGGGTAAGGAAAAGATTTCAATGGCAAAGAAAACCATCAATAACATTTAC
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* ** * ** *
763317 CCTAACAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * * * **
763382 TTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * * * *
763447 GCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGG-AGCCTAAT-CT
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTA-CCTAATCCT
* ** * * *
763510 GGAAATGAGCGGGGATTAGTATGAGCATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATTTT
324 -GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * *
763574 ATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGCACCAATGTCATTTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
* *
763639 AAGGTAGTGTGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* ** * * *
763661 CAATCTTGAAGAGAATGGAGACTTTGCTGACAATCAATGTTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* *
763726 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCACGACAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* *
763791 CCTAATAAGGAGAATGTGTTTATATTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
*
763856 TTGTTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
*
763921 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACACTATGTTTATGGTACCTAATCCTG
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
* *
763986 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAACTTTGATTCTAT
325 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTAT
* * * * *
764051 CAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGCATCAAAGTCAGGTATCCTAATGAA
390 CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
*
764116 GGGAAAGTGTTTTTGGTTCC
455 GGGAATGTGTTTTTGGTTCC
* *
764136 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTC
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * * *
764201 GATTTAAACGAAAATAGGGAAAAAAGAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGGAAAGAA-AAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * * ** ** *
764266 CCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-TT-TACGAGAAT
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTC--GAAT
** * * * * * * * *
764329 CAATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTGGTGGGAAGAAAGCGTTTC
193 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* * * * *
764394 TTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAATCC
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* * * * *
764459 TGAAAAGAATAGGGATTAGCATGAGTATTCATGTTTGCCTTATTTAAGAGATAAAATTTGATTCA
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
** * * * * * *
764524 ATCAATAACATTGGAAAAGAAAGCTTTTCTTGCAACACCAAACCATCAACGTCATGTATCTTAAT
388 ATCAATAACGGTGGAAGA-AAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* *
764589 GAAGGGAATGTATTTTTCGTTCC
452 GAAGGGAATGTGTTTTTGGTTCC
* * * * * * **
764612 TAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * * * *
764677 GACTTTAAGGAAAATAGGGTAAGGAAAAGATTTCAATGCCAAAGAAAACCATCAATAACATTTAC
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* ** * ** * *
764742 CCTAACAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAACAAATGAAGATCTTTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * * * ** *
764807 TTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCAT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * * * *
764872 GCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGG-AGCCTAAT-CT
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTA-CCTAATCCT
* * * *
764935 GGAAATGAACGGGGATTAGTATGAGCATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATTCT
324 -GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * *
764999 ATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGCACCAATGTCATTTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
* *
765064 AAGGTAGTGTGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * *
765086 CAATCTTGAAGAGAATGGAGACTTTGATGACAATCAATGCTTGTCTCATTTAAGGGTCTAAA-TT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTC-AAAGTT
* * *
765150 TGATTTTAAGGAAAATATGGCAAAGAAAAGATTTTCACGACAAAGGAAACCATCAATATCATTTA
65 TGATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* *
765215 TCCTAATAAGGAGAATGTGTTTATAGTTCCTAATCCCAAAACCAATGAAGATCATTGTTCGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
765280 CTTGTTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAAAAAGTGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* ** **
765345 TGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* *
765410 GAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * * * *
765475 TCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACG
389 TCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
* **
765540 AAAGGAATGT-TTTTTCATTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * * * * * * **
765561 TAATCTTCAAAAGATTGGAGACTGTTACGACAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * ** *
765626 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCAAAAAAAACCATCAATAACATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
** ** * *
765691 CCTAATAAAAAGAATGTGTTTGA-AGTGCCCGATCTCAAAACAAATGAAGATCATTGTTAGAATC
130 CCTAATAAGGAGAATGTGTTT-ATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * * * **
765755 CTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * * * * *
765820 TGCAAAACAAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCTAAT-CT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* *** * * *
765884 GGAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTTTTTTAAGAGATAAACTTTGATTCT
324 -GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* *
765949 ATCAATAACGGTGGAAGAAAAGGTTTTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
**
766014 AAGGGAGGGATGTTTTTGGTTCC
453 AAGGGAATG-TGTTTTTGGTTCC
* * *
766037 CAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
*
766102 GATTTTAAGGAAAATATGGCG-AAGAAAAGATTTCCACGCCAAAGGAAACCATCAATAGCATTTA
66 GATTTTAAGGAAAATA-GG-GAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
*
766166 TCCTAA-AGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
129 TCCTAATA-AGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
* * *
766230 CCTTGTTTATCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTC
193 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* *
766295 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACCTAATCT
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
*
766360 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * * * *
766425 ATCAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAGCATCGATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
766490 AAGGGAATGTGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * *
766512 CACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * *
766577 GATTTTAAGGAAAATATGGCAAATAAAAGATTTCCACACCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * ** * *
766642 CCTAATGAGGATG-ATATGTTTACGGTGCGTAATTTCAAAACCAATGAAGATCATTGTTCGAATC
130 CCTAATAAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
766706 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * *
766771 TGTGAAACCAAAGCATCAATACCATGTATCATTATGACAAGACTATGTTTATGGTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
*
766836 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * *
766901 TCAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
766966 AGGGAATGTGTTTTTGGTTCC
454 AGGGAATGTGTTTTTGGTTCC
766987 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
1 CAATCTTGAAA-AGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
* * *
767051 TGATTTTAAGGAAAATATGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATACCA-TTA
65 TGATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* *
767115 TCCTAATGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
** **
767180 CTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTTTGAAGAAAGTGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * ** *
767245 AGTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAAC-ATGTTTATGGTACCTAATCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGTACCTAATCC
* * * * *
767309 TGAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAACTTTGGTTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * **
767374 ATCAATAACGGAGGATGAAAAGCTTCTCTCGCAACACCAAAGCATCGGTGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
*
767439 AAGGGAATGTGGTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * *
767461 CAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGTCTCATTTATGGATCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
*
767526 GATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * * * **
767591 CGTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCACTCCAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * *
767656 TTGTTTATCTAC-TTTGAGGCATGAACTTAGGGTTTTCAAAAATTGGTGGGAAAAAAGTGTTTCT
195 TTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * ** ** *
767720 TGTGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTAACCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* *
767785 GAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * * * *
767850 TCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACG
389 TCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
* *
767915 AAAGGAATGT-TTTTTTGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * * ** * * * * **
767936 TAATCTTCAAAAGATTAGAGACTGTTGCGAGAATCAATACTTGTTTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * * *
768001 GATTTTCAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCATAGAAAACCATCAATAACATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
** * ** *
768066 CCTAATAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * * * **
768131 TTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * * * * * *
768196 GCAAAACCAAAGCAACAATATCGTGTATCCTTACGCGAAGACTATGTTTGTGGTGCCTAAT-CTA
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT-
* *** * * *
768260 GAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATTTTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
*
768324 TCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
* *
768389 AGGTAGTGTGTTTTTGGTTCC
454 AGGGAATGTGTTTTTGGTTCC
* * * *
768410 CAATCTTGAAGAGAATGGAGACTTTGATGACAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * *
768475 GATTTTAAGGAAAATATGGCAAAGAAAAGATTTTCACGACAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * *
768540 CCTAATAAAGAGAATGTGTTTATAGTTCCTAATCCCAAAACCAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
*
768605 TTGTTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
*
768670 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACACTATGTTTATGGTACCTAATCCTG
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
* *
768735 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAACTTTGATTCTAT
325 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTAT
* * * * *
768800 CAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGCATCAAAGTCAGGTATCCTAATGAA
390 CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
*
768865 GGGAAAGTGTTTTTGGTTCC
455 GGGAATGTGTTTTTGGTTCC
* *
768885 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTC
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * *
768950 GATTTAAACGAAAATAGGGCAAA-AAGAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTA
66 GATTTTAAGGAAAATAGGG-AAAGAA-AAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * * ** ** *
769014 TCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-TT-TACGAGAA
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTC--GAA
** * * * * * * * *
769077 TCAATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTGGTGGGAAGAAAGCGTTT
192 TCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTT
* * * *
769142 CTTGTGAAACCAAAGCATCAATACCATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAATC
257 CTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATC
* *
769207 CTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAACTTTGATTC
322 CTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTC
* * * * *
769272 TATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGCATCAAAGTCAGGTATCCTAAT
387 TATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* * *
769337 GAAGCGAA--AGTATTT--TTCC
452 GAAGGGAATGTGTTTTTGGTTCC
* * *
769356 CAATCTTGAAAA-AATGGAGACTATTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTC
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* ** * *
769420 GATTTAAACAAAAATAGGGCAAA-AAGAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
66 GATTTTAAGGAAAATAGGG-AAAGAA-AAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * * ** ** *
769484 TCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-TT-TACGAGAA
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTC--GAA
** * * * * * * *
769547 TCAATGTTTGTGTCATTT-ATGGTAGGAACTTAGTCTTTTCAAAAACTGGTGGGAAGAAAGCGTT
192 TCCTTGTTTGTCTCTTTTGA-GGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTT
* * * *
769611 TCTTGTGAAACCAAAGCATCAATACCATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAAT
256 TCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAAT
* *
769676 CCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAACTTTGATT
321 CCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATT
* * * * *
769741 CTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGCATCAAAGTCAGGTATCCTAA
386 CTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
* * *
769806 TGAAGCGAA--AGTATTT--TTCC
451 TGAAGGGAATGTGTTTTTGGTTCC
* *
769826 CAATCTTGAAAA-AATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTC
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* ** * *
769890 GATTTAAACAAAAATAGGGCAAA-AAGAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
66 GATTTTAAGGAAAATAGGG-AAAGAA-AAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * * ** ** *
769954 TCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-TT-TACCAGAA
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGT-TC-GAA
*** * * * * * * **
770017 TTAATGTTTGTGC-CATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTGGTGGGAAGAAAGCATT
192 TCCTTGTTTGT-CTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTT
* * * * *
770081 TCTTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAAT
256 TCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAAT
* ** *
770146 CCTGAAAAGAATGGGGATTAGCATGAGTATTCATGTTTACCTTATTTAAGAGATACAA-TTTGAC
321 CCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATA-AACTTTGAT
* * * * * *
770210 TATATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCAACACCAAACCATCAATGTCATGTATCTT
385 TCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCT
* *
770275 AATGAAGGGAATGTATTTTTTGTTCC
449 AATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * **
770301 TAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * * * * *
770366 GACTTTAAGGAAAATATGGTAAGGAAAAGATTTCAATGCCAAAGAAAACCATCAATAACATTTAC
66 GATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* ** *
770431 CCTAATAAAGAGAATGTGTTTATAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * * * **
770496 TTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * * * *
770561 GCAAAACCAAAGCAACAATATCAAGTATCCTTATGCGAAGACTATGTTTGTGGTACCTAAT-CTG
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT-
* * * * * *
770625 GCAATGAGTGGGGATTAGTATGAGCATTCAAGTTTGTCTTTTTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* *
770690 TCAATAACGGTGGAAGAAAAGGTTTTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
**
770755 AGGGAGGGATGTTTTTGGTTCC
454 AGGGAATG-TGTTTTTGGTTCC
* * *
770777 CAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * *
770842 GATTTTAAGGAAAATATGGCG-AAGAAAAGATTTCTATGCCAAAGGAAACCATCAATAGCATTTA
66 GATTTTAAGGAAAATA-GG-GAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * * *
770906 TCCTAA-AGAGAAGAATGTGTTTATAGTTCCTAATCTCAAAATCAATGAAGATCATTGCTCGAAT
129 TCCTAATA-AGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
**
770970 CCTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
193 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* *
771035 TTGCGAAAACAAATCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* * * *
771100 T-AAAAGAATGTGGATTAGTATGAGTAGTCATGTTTATCTTATTTAAAAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * *
771164 ATCAGTAACGGAGGAAGAAAAGCTTCTCTCGCAGCACCAAAGCATCAATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
771229 AAGGGAATGTGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * *
771251 CACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * *
771316 GATTTTAAGGAAAATATGGCAAACAAAAGATTTCCACACCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * ** *
771381 CCTAATGAGGATG-ACGTGTTTACGGTGCCTAATCTTAAAACCAATGAAGATCATTGTTCGAATC
130 CCTAATAAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
771445 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* *
771510 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTAATGGTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
*
771575 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * * *
771640 TCAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAGCATCGATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
771705 AGGGAATGTGTTTTTGGTTCC
454 AGGGAATGTGTTTTTGGTTCC
771726 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
1 CAATCTTGAAA-AGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
* *
771790 TGATTTTAAGGAAAATATGGCAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATACCA-TTA
65 TGATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* *
771854 TCCTAATGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
**
771919 CTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * ** *
771984 AGTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAAC-AGGTTTATGGTACCTAATCC
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGTACCTAATCC
* * * *
772048 TGAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * * *
772113 ATCAATAACGGAGGACGAAAAGCTTCTCTCGCAACACCAAAGCATCAGTGTCATGTACCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
*
772178 AAGGGAATGTGGTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * *
772200 CAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCCTGTCTCATTTATGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
*
772265 GATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * * **
772330 CCTAATGAGGAGAAATTTGTTTATAATGCCTAATCTCAAAACCAATCCAGATCATTGTTCGAATC
130 CCTAATAAGGAG-AATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * *
772395 CTTGTTTATCTAC-TTTGAGGCATGAACTTAGGGTTTTCAAAAATTGGTGGGAAAAAAGTGTTTC
194 CTTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* ** **
772459 TTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTAATCC
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* *
772524 TGAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTTAAGAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * * * * *
772589 ATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAAC
388 ATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* **
772654 GAAAGGAATGT-TTTTTCATTCC
452 GAAGGGAATGTGTTTTTGGTTCC
* * * * * * * * * **
772676 TAATCTTCAAAAGATTGGAGACTGTTACGACAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * *
772741 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCAAAGAAAACCATCAATAACATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
** ** *
772806 CCTAATAAAAAGAATGTGTTTGA-AGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATC
130 CCTAATAAGGAGAATGTGTTT-ATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * * * **
772870 CTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * * * * *
772935 TGCAAAACAAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCTAAT-CT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* *** * * *
772999 GGAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTTTTTTAAGAGATAAACTTTGATTCT
324 -GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* *
773064 ATCAATAACGGTGGAAGAAAAGGTTTTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
**
773129 AAGGGAGGGATGTTTTTGGTTCC
453 AAGGGAATG-TGTTTTTGGTTCC
* * *
773152 CAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* *
773217 GATTTTAAGGAAAATATGGCG-AAGAAAAGATTTCCACACCAAAGGAAACCATCAATAGCATTTA
66 GATTTTAAGGAAAATA-GG-GAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
*
773281 TCCTAA-AGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
129 TCCTAATA-AGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
* * *
773345 CCTTGTTTATCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTC
193 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
*
773410 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACCTAATCC
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
*
773475 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * * * *
773540 ATCAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAGCATCGATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
773605 AAGGGAATGTGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * * *
773627 TACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * *
773692 GATTTTAAGGAAAATATGGCAAACAAAAGATTTCCACACCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * ** *
773757 CCTAATGAGGATG-ATATGTTTACGGTGCCTAATTTCAAAACCAATGAAGATCATTGTTCGAATC
130 CCTAATAAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
773821 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * *
773886 TGTGAAACCAAAGCATCAATACCATGTATCATTATGACAAGACTATGTTTATGGTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
*
773951 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * *
774016 TCAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
774081 AGGGAATGTGTTTTTGGTTCC
454 AGGGAATGTGTTTTTGGTTCC
774102 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
1 CAATCTTGAAA-AGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
* * *
774166 TGATTTTAAGGAAAATATGGCAAAGAAAAGATTACCACGCCAAAGGAAACCATCAATACCA-TTA
65 TGATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* *
774230 TCCTAATGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
** **
774295 CTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTTTGAAGAAAGTGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * ** * *
774360 AGTGAAAAGAAAGCATCAACACCATGTATCCTTATGAGAAGAAC-ATGTTTATGGTACCTAATCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGTACCTAATCC
* * * * *
774424 TGAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAACTTTGGTTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * **
774489 ATCAATAACGGAGGACGAAAAGCTTCTCTCGCAACACCAAAGCATCGGTGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
*
774554 AAGGGAATGTGGTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * *
774576 CAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGTCTCATTTATGGATCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
*
774641 GATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * * **
774706 CGTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAATCCAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * *
774771 TTGTTTATCTAC-TTTGAGGCATGAACTTAGGGTTTTCAAAAATTGGTGGGAAAAAAGTGTTTCT
195 TTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* ** **
774835 TGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* *
774900 GAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * * * *
774965 TCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACG
389 TCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
* *
775030 AAAGGAATGT-TTTTTTGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * * ** * * * * **
775051 TAATCTTCAAAAGATTAGAGACTGTTGCGAGAATCAATACTTGTTTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * * *
775116 GATTTTCAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCATAGAAAACCATCAATAACATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
** * ** *
775181 CCTAATAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * * * **
775246 TTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * * * * * *
775311 GCAAAACCAAAGCAACAATATCGTGTATCCTTACGCGAAGACTATGTTTGTGGTGCCTAAT-CTA
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT-
* *** * * *
775375 GAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATTTTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
*
775439 TCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
* *
775504 AGGTAGTGTGTTTTTGGTTCC
454 AGGGAATGTGTTTTTGGTTCC
* * * * * *
775525 CAATCTTGAAGAGAATGGAGGCTTTGATGACAATCAATGCTTGTCTCTTTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* *
775590 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCACGACAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
*
775655 CCTAATAAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* *
775720 TTGCTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
*
775785 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACACTATGTTTATGGTACCTAATCCTG
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
* *
775850 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAACTTTGATTCTAT
325 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTAT
* * * * *
775915 CAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGCATCAAAGTCAGGTATCCTAATGAA
390 CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
*
775980 GGGAAAGTGTTTTTGGTTCC
455 GGGAATGTGTTTTTGGTTCC
* *
776000 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTC
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * *
776065 GATTTAAACGAAAATAGGGCAAA-AAGAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTA
66 GATTTTAAGGAAAATAGGG-AAAGAA-AAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * * ** ** * * **
776129 TCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATCTTTATGAGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
** * * * * * * * * *
776194 AATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTGGTTGGAAGAAAGCGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * *
776259 TGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* * *
776324 GAAAAGAATGGGGATTAGCATGAGTATTCATGTTTGTCTTATTTAAGAGATAAAATTTGATTCAA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * * * * * *
776389 TGAATAACAGTGGAAAAGAAAGCTTTTCTTGCAACACCAAACCATCAACGTCATGTATCTTAATG
389 TCAATAACGGTGGAAGA-AAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
* *
776454 AAGGGAATGTATTTTTCGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * * * **
776476 TAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * * * * *
776541 GACTTTAAGGAAAATAGGGTAAGGAAAAGATTTCAATGCGAAAGAAAACCATCAATAACATTTAC
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * ** *
776606 CCTAACAAAGAGAATGTGTTTATAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * * **
776671 TTGTTTGTCTCTTTTGAGG-GTCGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCT
195 TTGTTTGTCTCTTTTGAGGCAT-GAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * * * *
776735 TGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCTAAT-CT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* ** *
776799 GGAAATGAGCGGGGATTAGTATGAGTATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATTCT
324 -GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* *
776863 ATCAATAACGGTGGAAGAAAAGGTTCTCTCGCTACACCAAAGCATCAATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
* *
776928 AAGGTAGTGTGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * *
776950 CAATCTT-AAAGAGAATGGAGACTTTGATGACAATCAATGCTTGTCTCATTTAAGGGTCTAAGTT
1 CAATCTTGAAA-AGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
* * **
777014 TGATTTTATGGAAAATAGGGAGAAGAAAAGATTTTCACGATAAAGGAAACCATCAATATCATTTA
65 TGATTTTAAGGAAAATAGGGA-AAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * * *
777079 TCCTAATAAGGAGAATGTGTTTATAGTTCTTAATCTCAAAACCAATGAAGATAATTGTTCAAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
777144 CTTGCTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* *
777209 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACACTATGTTTAGGGTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* * *
777274 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTGTTTAAGATATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * * * *
777339 TCAATAGCGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGCATCAAAGTCAGGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
*
777404 AGGGAAAGTG--TTT--TTCC
454 AGGGAATGTGTTTTTGGTTCC
* * *
777421 CAATCTTGAAAA-AATAGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTC
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* ** * *
777485 GATTTAAACAAAAATAGGGCAAA-AAGAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
66 GATTTTAAGGAAAATAGGG-AAAGAA-AAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * * ** ** *
777549 TCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATTAATGAAGATC-TT-TACCAGAA
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGT-TC-GAA
*** * * * * * * * *
777612 TTAATGTTTGTGC-CATTTAAGGTAGGAACTTAGTCCTTTCAAAAACTGGTGGGAAGAAAGCGTT
192 TCCTTGTTTGT-CTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTT
* * * * *
777676 TCTTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAAT
256 TCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAAT
* * *
777741 CCTGAAAAAAGAATGGGGATTAGCATGAGTATTCATGTTTGCCTTATTTAAGAGATAAAATTTGA
321 CCTG--AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGA
* * * * *
777806 CTCTATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCAACACCAAACCATCAATGTCATGTATCC
384 TTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCC
* *
777871 TAATGAAGGGAATGTATTTTTTGTTCC
448 TAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * **
777898 TAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * * * * *
777963 GACTTTAAGGAAAATATGGTAAGGAAAAGATTTCAATGCCAAAGAAAACCATCAATAACATTTAC
66 GATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* ** *
778028 CCTAATAAAGAGAATGTGTTTATAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * * * **
778093 TTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * * * *
778158 GCAAAACCAAAGCAACAATATCAAGTATCCTTATGTGAAGACTATGTTTGTGGTACCTAAT-CTG
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT-
* * * * * *
778222 GCAATGAGTGGGGATTAGTATGAGCATTCAAGTTTGTCTTTTTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * *
778287 TCAATAATGGTGGAAGAAAAGGTTTTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
**
778352 AGGGAGGGATGTTTTTGGTTCC
454 AGGGAATG-TGTTTTTGGTTCC
* * *
778374 CAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* *
778439 GATTTTAAGGAAAATATGGCG-AAGAAAAGATTTCCATGCCAAAGGAAACCATCAATAGCATTTA
66 GATTTTAAGGAAAATA-GG-GAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * * *
778503 TCCTAA-AGAGAAGAATGTGTTTATAGTTCCTAATCTCAAAATCAATGAAGATCATTGCTCGAAT
129 TCCTAATA-AGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
**
778567 CCTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
193 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* *
778632 TTGCGAAAACAAATCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* * * *
778697 T-AAAAGAATGTGGATTAGTATAAGTATTCATGTTTATCTTATTTAAAAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* *
778761 ATCAGTAACGGTGGAAGAAAAGCTTCTCTCGCAGCACCAAAGCATCAATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
*
778826 AAGGGAATATGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * * *
778848 CACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTCTCATTTAGGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * *
778913 GATTTTAAGGAAAATATGGCAAACAAAAGATTTCCACACCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* ** *
778978 CCTAATGAGGATG-ATGTGTTTACGGTGCCTAATCTTAAAACCAATGAAGATCATTGTTCGAATC
130 CCTAATAAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
779042 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* *
779107 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTAATGGTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
*
779172 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * *
779237 TCAATAATGGTGGAAGAAAAGGTTCTCTCGTAACACCAAAGCATCGATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
779302 AGGGAATGTGTTTTTGGTTCC
454 AGGGAATGTGTTTTTGGTTCC
779323 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
1 CAATCTTGAAA-AGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
* * *
779387 TGATTTTAAGGAAAATATGGCAAAGAAAAGATTTCCACGCCAAAGGAAACCATTAATACCA-TTA
65 TGATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * * *
779451 TCCTAATGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAGGATCATTGTTAGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* ** * *
779516 CATGCATGTCTCTTTTGGGGTATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * **
779581 AGTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAAC-ATGTTTATGGTACCTAATCC
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGTACCTAATCC
* * * *
779645 TGAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * * * *
779710 ATTAATAACGGAGGACGAAAAGCTTCTCTCGCAACACCAAAGCATTAGTGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
*
779775 AAGGGAATGTGGTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * *
779797 CAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGTCTCATTTATGGGTCTAATTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
*
779862 GATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * * **
779927 CCTAATGAGGAGAAATTTGTTTATAATGCCTAATCTCAAAACCAATCCAGATCATTGTTCGAATC
130 CCTAATAAGGAG-AATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * *
779992 CTTGTTTATCTAC-TTTGAGGCATGAACTTAGGGTTTTCAAAAATTGGTGGGAAAAAAGTGTTTC
194 CTTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* ** **
780056 TTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTAATCC
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* *
780121 TGAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTTAAGAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * * * * *
780186 ATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAAC
388 ATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* **
780251 GAAAGGAATGT-TTTTTCATTCC
452 GAAGGGAATGTGTTTTTGGTTCC
* * * * * * * * * **
780273 TAATCTTCAAAAGATTGGAGACTGTTACGTGAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * *
780338 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCAAAGAAAACCATCAATAACATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
** ** *
780403 CCTAATAAAAAGAATGTGTTTGA-AGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATC
130 CCTAATAAGGAGAATGTGTTT-ATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * * * * **
780467 CTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGGAACCGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * * * * *
780532 TGCAAAACCAAAGCAACAATATCGTGTATCCTTAAGCGAAGACTATGTTTGTGGTGCCTAAT-CT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* *** * * *
780596 GGAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTTTTTTAAGAGATAAACTTTGATTCT
324 -GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * * *
780661 ATCAATAACGATGGAAGAAAAGGTTTTCTCGCAACACCAAAGCATCAATGTCATGTAACCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
**
780726 AAGGGAGGGATGTTTTTGGTTCC
453 AAGGGAATG-TGTTTTTGGTTCC
* * *
780749 CAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* *
780814 GATTTTAAGGAAACTATGGCG-AAGAAAAGATTTCCACGCCAAAGGAAACCATCAATAGCATTTA
66 GATTTTAAGGAAAATA-GG-GAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
*
780878 TCCTAA-AGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
129 TCCTAATA-AGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
* *
780942 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTC
193 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* *
781007 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACATGACTATGTTTATGGTACCTAATCC
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
*
781072 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTA-TTAAGAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * * *
781136 ATCAATAATGGTGGAAGAGAAGCTTCTCTCGTAACACCAAAGCATCGATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
781201 AAGGGAATGTGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * *
781223 CACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * *
781288 GATTTTAAGGAAAATATGGCAAACAAAAGATTTCCACACCAAAGGAAACTATCAATATCATTTAT
66 GATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* ** *
781353 CCTAATGAGGATG-ATGTGTTTACGGTGCCTAATTTCAAAACCAATGAAGATCATTGTTCGAATC
130 CCTAATAAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
781417 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
*
781482 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
*
781547 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * * *
781612 TCAATAATGGTGGAAGAGAAGGTTCTCTTGTAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
781677 AGGGAATGTGTTTTTGGTTCC
454 AGGGAATGTGTTTTTGGTTCC
781698 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
1 CAATCTTGAAA-AGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
* *
781762 TGATTTTAAGGAAAATATGGCAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATACCA-TTA
65 TGATTTTAAGGAAAATA-GGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
*
781826 TCCTAATAAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
** **
781891 CTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTTTGAAGAAAGTGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * ** *
781956 AGTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAAC-ATGTTTATGGTACCTAATCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGTACCTAATCC
* * * * *
782020 TGAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAACTTTGGTTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* * *
782085 ATCAATAACGGAGGACGAAAAGCTTCTCTCGCAACACCAAAGCATCGATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
*
782150 AAGGGAATGTGGTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * *
782172 CAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGTCTCATTTATGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
*
782237 GATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * * **
782302 CGTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAATCCAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * *
782367 TTGTTTATC-CACTTTGAGGCATGAACTTAGGGTTTTCAAAAATTGGTGGGAAAAAAGTGTTTCT
195 TTGTTTGTCTC-TTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* ** **
782431 TGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* *
782496 GAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * * * * * *
782561 TCAATAACAGTGGAAAGAAAAGATTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACG
389 TCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
* *
782626 AAAGGAATGT-TTTTTCGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * * ** * * * **
782647 TAATCTTCAAAAGATTAGAGACTATTGCGAGAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * *
782712 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCATAGAAAACCATCAATAACATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
** * ** *
782777 CCTAATAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * * * **
782842 TTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * * * * * *
782907 GCAAAACCAAAGCAACAATATCGTGTATCCTTTTGCGAAGACTATGTTTGTGGTGCCTAAT-CTA
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT-
* *** * *
782971 GAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
*
783035 TCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
* *
783100 AGGTAGTGTGTTTTTGGTTCC
454 AGGGAATGTGTTTTTGGTTCC
* * * *
783121 CAATCTTGAAGAGAATGGAGACTTTGATGACAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* *
783186 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCACGACAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
*
783251 CCTAATAAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * *
783316 TTGCTTGCCTCTTTTGAGGCCTGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * *
783381 GAGAAACCAAAGCATCAATACCATGTATCCTAATGAGAACACTATGTTTATGGTACCTAATCCTG
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
* * *
783446 AAAAGAATAGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAACTTTGATTCTAT
325 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTAT
* * * *** * *
783511 CAAAAACAGTGGAAGAAAAGCTTCTCTTGTGTCAACAAAGCATCAAAGTCA-GTATCCTAATGAA
390 CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
*
783575 GGGAAAGTGTTTTTGGTTCC
455 GGGAATGTGTTTTTGGTTCC
* *
783595 CAATCTTGAAAGGAATGGAGA-TTTTATGAGAATCAATGATTGTCTCATTTAAGGGTC-AAGCTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAG-TT
* * *** * * * *
783658 CGATTTAAACCCAAATAGGGCAAA-AAGATGATTTCCAAGCCAAAGAAAACTATCAATATCATTT
65 TGATTTTAAGGAAAATAGGG-AAAGAA-AAGATTTCCACGCCAAAGGAAACCATCAATATCATTT
* * ** ** *
783722 ATCCTAATGAGGAGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-TT-TACCAGA
128 ATCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGT-TC-GA
** * * * * * * * *
783785 ATCAATGTTTG-CGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTAGTGGGAAGAAAGCGT
191 ATCCTTGTTTGTC-TCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGT
* * * * *
783849 TTCTT-CTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATGCTGCCTA
255 TTCTTGC-GAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTA
* *
783913 ATCCTGAAAAGAATGGGGATTAGCATGAGTATTCATGTTTGTCTTATTTAAGAGATAAAATTTGA
319 ATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGA
* * * * * * *
783978 CTCTATGAATAACAGTGGAAAGAAAAGCTTTTCTTGCAACACCAAACCATCAATGTCATGTATCT
384 TTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCC
* *
784043 TAATGAAGGGAATGTATTTTTCGTTCC
448 TAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * **
784070 TAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACATT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * * * * * * *
784135 CACTTTAAGGAAAATAGGGTAAGAAAAAGATTTCAATGCGAAAGAAAACCATCAATAACATTTAC
66 GATTTTAAGGAAAATAGGGAAAG-AAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* * ** *
784200 CCTAACAAAGAGAATGTGTTTATAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * * * * **
784265 TTGTTTGTCTCATTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * * * * *
784330 GCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCTAAT-CTG
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT-
* * * * * *
784394 GAAATGAGTGGGGATTAGTATGAGCATTCAAGTTTGTCTTTTTTAAGAGAAAAACTTTGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* *
784459 TCAATAACGGTGGAAGAAAAGGTTTTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
*
784524 AGGGAAGGATGTTTTTGGTTCC
454 AGGGAATG-TGTTTTTGGTTCC
* * *
784546 CAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
*
784611 GATTTTAAGGAAAATATGGCG-AAGAAAAGATTTCCACGCCAAAGGAAACCATCAATAGCATTTA
66 GATTTTAAGGAAAATA-GG-GAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * *
784675 TCCTAA-AGAGGAGAATGTGTTTAAAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCAAAT
129 TCCTAATA-AGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
**
784739 CCTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
193 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* * * * *
784804 TTGCAAAAACAAAGCATCAATACCACGTATCTTTATGAGAAGACTAGGTTTATGGTACCTAATCC
258 TTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* * *
784869 T-AAAAGAATGTGGATTAGTATGAGTATTCATGTTTATCTTATTTAAAAGATAAACTTTGATTCT
323 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* *
784933 ATCAGTAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCAACAATGTCATGTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
784998 AAGGGAATGTGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * * * * *
785020 CACTCTTGAAGAGAACGGAGACTTTTGTGAGAATAAATTCTTGTCCCATTTAAGGGTCTAAGTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
*
785085 GATTTTAAGGAAAATAGGGCAAACAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* ** * *
785150 CCTAATGAGGATG-ATGTGTTTACGGTGCCTAATCTCAAAACAAATGAAGATCATTGTTCGAATT
130 CCTAATAAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * *
785214 CTTGTTTGTCACTTTTGAGGCATAAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
*
785279 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* * *
785344 GAAAAGAATGGGGATTAGTATGAGTATTCATCTTTATCTTATTTAAGAGATAAACTTTGATTCTC
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
* * *
785409 TCAATAAAGGTGGAAGAAAAGGTTCTCTCGTAACACCAAAGCATCAATGTCATGTATCCTAATGA
389 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
*
785474 AGGGAATGTGTGTTTGGTTCC
454 AGGGAATGTGTTTTTGGTTCC
* * *
785495 CAATCTT-AAAGATAATGGAAACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTT
1 CAATCTTGAAA-AGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
** * *
785559 TGATTTTAAGGAAAATAGGGCAATTAAAAGATTTCCACGCCGAAGGAAACTATCAATATCATTTA
65 TGATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* *
785624 TCCTAATGAGGAGAATGAGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * *
785689 TTTGTTTGTCTCTTTTGGGGCTTGAACTTAGGCTTTTTAAAAATTGGTGGGAAGAAAGTGTTTCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * **
785754 TGCGAAACCAAAGTATGAATACCATGTATCCTTATGAGAAGACTATATTTATGGTGCCTAATATT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* * *
785819 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGACACAAACTTCGATTCTA
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
** * ** * * * *
785884 TCAATAATTGTGGAAAAAAAAGCTTCAGTTG-AGGCACCAATGAATCAATGTCATGTATCCTAAT
389 TCAATAACGGTGG-AAGAAAAGCTTCTCTCGCA-ACACCAAAGCATCAATGTCATGTATCCTAAT
*
785948 GAAGGGAATGTATTTTTGGTTCC
452 GAAGGGAATGTGTTTTTGGTTCC
* * * * * * ** * ** *
785971 CTATCCTGAAAAGATTAGACACTATTACAAGAATGAATGCTTGTCTTTTTTAAGGGTCAAACTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * *
786036 GATTTTAAGGAAATTAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTAT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
* ** *
786101 CCTAATTAGGAGAATGTGTTTATAGTGCCTAATCTTGAAACCAAGGAAGATCATTGTTCGAATCC
130 CCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* **
786166 TTGTTTGTCTCTTTTGAGGCATGGACTTAGGCTTTTCAAAAATTGGTGGGAAGATGGTGTTTCTT
195 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * * * * * *
786231 GCTAAAGCAAAGCATTAATACCATGTATCCTTATGCGAACACTATGTTTGTGGTGCCTAATCC-C
260 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
* ** * *
786295 AAAATGAGTGGGGATTAGTGCGCGTATTCATGTTTGTCTT-TCTTAAGAGACAAACTTTGATTCT
325 AAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT-TTAAGAGATAAACTTTGATTCT
* * * ** * * *
786359 ATCAATAACGGTGGAGGAAAAGCTTTTCTTGTGACACCAAAGCATTAATTTCATGTATCATAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
* *
786424 AAGGGAACGTATTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * * *
786446 CAATCTTGAAAAGATTGGAGA-TTGTTACGAGAATCAAAGCTTCTCTCATTTAATGGTCAAACTT
1 CAATCTTGAAAAGAATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTT
** * * * * *
786510 TGATTTTAAATAAAATAGGGCAAAGAAAAGGTTTACATGCCAAAGAAAACAATCAATATCATTTA
65 TGATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTA
* * *
786575 TCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCGAAACCAATGAAGATGATTGTTCGAATC
129 TCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * *
786640 CTTATTTATCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGCGTTCCT
194 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * *
786705 TGC-AAACCAAAGCATCAATATCATGTATCCTTGTGAGAAGACTATGTTTGTGGTGCCTAATCCT
259 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* *
786769 GAAATGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTTAGAGATAAA-TTGTGATTCT
324 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTT-TGATTCT
* * *
786833 ATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATTTATCCTAATG
388 ATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATG
786898 AAGGGAATGTGTTTTTGGTTCC
453 AAGGGAATGTGTTTTTGGTTCC
* * * * *
786920 TAATCTTGAAAAGAATGGAGTCTTTTAGGAGAATCAGTGCTTGTCTCATTTAAGGGTCAAACTTT
1 CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
* * * ** *
786985 GATTTTAAGGAAAATAGGGCAAAGAAAAGTTTTCCAAGCAAAAACAAAAAACCATCAATTTCATT
66 GATTTTAAGGAAAATAGGG-AAAGAAAAGATTTCCACGC--CAA-AGGAAACCATCAATATCATT
* * *** ** * ** *
787050 TATCCTAATGAGGAGAATATGTTTATAGTGCCTAAAAGCAAAATGAATGAAGATCCTTACTAGAA
127 TATCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAA
* * * * * * * ** **
787115 TCCATGTTTATCTCATTTGAAGCACGAACTTAAGACTTTTTAAAAATTTATGGGAAGAAAGCATT
192 TCCTTGTTTGTCTCTTTTGAGGCATGAACTT-AGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTT
* * * * * **
787180 TCTTGCAAAATCAAGGCATCAATATCGA-GTATCCTTATGAGCAGACTATGTTTATGGTGTCTAA
256 TCTTGCGAAACCAAAGCATCAATA-CCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAA
* * * *
787244 TCCTTAAAAAGAATAGGGATTAGTATGAGTATTCATGTTTATCCTT-TTTAAGAGACAAACTTTG
320 TCC-TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT-CTTATTTAAGAGATAAACTTTG
* *
787308 ATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCATGAAGGCATCAATG
383 ATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCA--AA-GCATCAATG
787366 AAGATGATTG
Statistics
Matches: 21488, Mismatches: 2912, Indels: 501
0.86 0.12 0.02
Matches are distributed among these distances:
468 1 0.00
469 6 0.00
470 1086 0.05
471 85 0.00
472 83 0.00
473 565 0.03
474 6354 0.30
475 7591 0.35
476 4994 0.23
477 271 0.01
478 286 0.01
479 57 0.00
480 93 0.00
481 5 0.00
482 2 0.00
483 9 0.00
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.31
Consensus pattern (474 bp):
CAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
GATTTTAAGGAAAATAGGGAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTATC
CTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCCT
TGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTG
CGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTGA
AAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATC
AATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAAG
GGAATGTGTTTTTGGTTCC
Found at i:767431 original size:949 final size:950
Alignment explanation
Indices: 762237--787365 Score: 32270
Period size: 949 Copynumber: 26.5 Consensus size: 950
762227 TTTGAGCTCA
* * * * *
762237 CAATCTTGAAA-AGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGG-CTAAACA
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTC-AAACT
* * * * *
762300 TTGACTTTAAGGAAAATAGGGTAAGGAAAAGATTTCAATGCCAAAGAAAACCATCAATAACATTT
64 TTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTT
* * * ** *
762365 ACCCTAATAAAGAGAATGTGTTTATAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAAT
129 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
* * ** * * * **
762430 CCTTGTTTGTCTCTTTTGAGGGACGAAAATAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTC
194 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* * * * * *
762495 TTG-CAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGG-AGCCTAAT
259 TTGTGAAAA-CAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTA-CCTAAT
* ** * * *
762558 -CTGGAAATGAGCGGGGATTAGTATGAGCATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGAT
322 CCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGAT
* * *
762621 TCTATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGCACCAATGTCATTTATCCTA
386 TCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTA
* * * *
762686 ATGAAGGTAGTGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTGATGACAATCAATGC
451 ATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGC
* * *
762751 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATATGGCAAAGAAAAGATTTTCACGAC
516 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCC
* * **
762816 AAAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATAATGCCTAATGACAAAA
581 AAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAA
** * ** * * * * * *
762881 TGAATGAAGATC-TT-TACGAGAATCAATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCA
646 CCAATGAAGATCATTGTTC--GAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCA
* * * * *
762944 AAAACTGGTGGGAAGAAAGCGTTTCTTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGA
709 AAAATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGA
* * ** * *
763009 AGATTATGTTTATGGTCCCTAATCCTGAAAAGAATAAGGATTAGCATGAGTATTCATGTTTGCCT
774 AGACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCT
* * * * * *
763074 TATTTAAGAGATAAAATTTGATTCAATCAATAACAGTGGAAAAGAAAGCTTTTCTTGCAACACCA
839 TATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGA-AAAGCTTCTCTCGCAACACCA
* * * * *
763139 AACCATCAACGTCATGTATCTTAATGAAGGGAATGTATTTTTCGTTCC
903 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * *
763187 TAATCTTGAAA-AGATTGGAGACTATTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* * * * * *
763251 TGACTTTAAGGAAAATAGGGTAAGGAAAAGATTTCAATGGCAAAGAAAACCATCAATAACATTTA
65 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
* ** ** * ** *
763316 CCCTAACAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATC
130 TCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * * * **
763381 CTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCT
195 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * * *
763446 TG-CAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGG-AGCCTAAT-
260 TGTGAAAA-CAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTA-CCTAATC
* ** * * *
763508 CTGGAAATGAGCGGGGATTAGTATGAGCATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATT
323 CT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATT
* * * *
763572 TTATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGCACCAATGTCATTTATCCTAA
387 CTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
* * ** * *
763637 TGAAGGTAGTGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTGCTGACAATCAATGTT
452 TGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCT
* *
763702 TGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCACGACA
517 TGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCA
* * *
763767 AAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATATTTCCTAATCTCAAAAC
582 AAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAAC
*
763832 CAATGAAGATCATTGTTCGAATCCTTGTTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
647 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
*
763897 ATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACA
712 ATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
*
763962 CTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTAT
777 CTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * *
764027 TTAAGATATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGC
842 TTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGC
* * *
764092 ATCAAAGTCAGGTATCCTAATGAAGGGAAAGTGTTTTTGGTTCC
907 ATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
764136 CAATCTTGAAA-AGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* * * * *
764200 CGATTTAAACGAAAATAGGG-AAAAAAGAAGATTTTCATGCCAAAGAAAACCATCAATATCATTT
65 TGATTTTAAGGAAAATAGGGCAAAGAA-AAGATTTCCATGCCAAAGAAAACCATCAATATCATTT
* * ** ** *
764264 ATCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-TT-TACGAGA
129 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTC--GA
** * * * * * * * *
764327 ATCAATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTGGTGGGAAGAAAGCGTT
192 ATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTT
* * * * *
764392 TCTTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAAT
257 TCTTGTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAAT
* * ** *
764457 CCTGAAAAGAATAGGGATTAGCATGAGTATTCATGTTTGCCTTATTTAAGAGATAAAATTTGATT
322 CCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATT
* ** * * * * * *
764522 CAATCAATAACATTGGAAAAGAAAGCTTTTCTTGCAACACCAAACCATCAACGTCATGTATCTTA
387 CTATCAATAACGGTGGAAGA-AAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTA
* * * * * * *
764587 ATGAAGGGAATGTATTTTTCGTTCCTAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATAC
451 ATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGC
* * * ** * * * * *
764652 TTGTCTTATTTAAGGGCCAAACATTGACTTTAAGGAAAATAGGGTAAGGAAAAGATTTCAATGCC
516 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCC
* * * ** ** * **
764717 AAAGAAAACCATCAATAACATTTACCCTAACAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAA
581 AAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAA
* * * * * *
764782 CAAATGAAGATCTTTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAA
646 CCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAA
* ** * * * * * *
764847 AATTGGAGGGAAGAAACCGTTTCATGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAG
711 AATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
* * * * *
764912 ACTATGTTTGTGG-AGCCTAAT-CTGGAAATGAACGGGGATTAGTATGAGCATTCAAGTTTGTCT
776 ACTATGTTTATGGTA-CCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCT
*
764975 T-TTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAA
839 TATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAA
* * * *
765039 AGCACCAATGTCATTTATCCTAATGAAGGTAGTGTGTTTTTGGTTCC
904 AGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * *
765086 CAATCTTGAAGAGAATGGAGACTTTGATGACAATCAATGCTTGTCTCATTTAAGGGTCTAAA-TT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTC-AAACTT
* * * * *
765150 TGATTTTAAGGAAAATATGGCAAAGAAAAGATTTTCACGACAAAGGAAACCATCAATATCATTTA
65 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
* * *
765215 TCCTAATAAGGAGAATGTGTTTATAGTTCCTAATCCCAAAACCAATGAAGATCATTGTTCGAATC
130 TCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
765280 CTTGTTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAAAAAGTGTTTCT
195 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* ** **
765345 TGCG-AAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTAATCC
260 TGTGAAAAC-AAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* * *
765409 TGAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTTAAGAGATAAACTTTGATTCT
324 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCT
* * * * * *
765474 ATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAAC
389 ATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* ** * * * * * * * *
765539 GAAAGGAATGT-TTTTTCATTCCTAATCTTCAAAAGATTGGAGACTGTTACGACAATCAATACTT
453 GAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTT
* * * ** * *
765603 GTCTTATTTAAGGGCCAAACATTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCAA
518 GTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAA
** * * ** **
765668 AAAAAACCATCAATAACATTTATCCTAATAAAAAGAATGTGTTTGA-AGTGCCCGATCTCAAAAC
583 AGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTT-ATAGTGCCTAATCTCAAAAC
* * * * * *
765732 AAATGAAGATCATTGTTAGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAA
647 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* ** * * * * * *
765797 ATTGGAGGGAAGAAACCGTTTCTTGCAAAACAAAAGCAACAATATCGTGTATCCTTATGCGAAGA
712 ATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * *** * * *
765862 CTATGTTTGTGGTGCCTAAT-CTGGAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTTT
777 CTATGTTTATGGTACCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* *
765926 TTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGGTTTTCTCGCAACACCAAAG
841 TTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAG
**
765991 CATCAATGTCATGTATCCTAATGAAGGGAGGGATGTTTTTGGTTCC
906 CATCAATGTCATGTATCCTAATGAAGGGAATG-TGTTTTTGGTTCC
* * * *
766037 CAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * * * *
766102 GATTTTAAGGAAAATATGGCGAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATAGCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
* *
766167 CCTAAAGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * *
766232 TTGTTTATCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCTT
196 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * *
766297 GCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACCTAATCTTG
261 GTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
766362 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTAT
326 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTAT
* * * * *
766427 CAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAGCATCGATGTCATGTATCCTAATGAA
391 CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * *
766492 GGGAATGTGTTTTTGGTTCCCACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTC
456 GGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTC
* * *
766557 TCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATATGGCAAATAAAAGATTTCCACACCAAAGG
521 TCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGG
* ** * *
766622 AAACCATCAATATCATTTATCCTAATGAGGATG-ATATGTTTACGGTGCGTAATTTCAAAACCAA
586 AAACCATCAATATCATTTATCCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAA
*
766686 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATT
650 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATT
* * * *
766751 GGTGGGAAGAAAGTGATTCTTGTGAAACCAAAGCATCAATACCATGTATCATTATGACAAGACTA
715 GGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTA
*
766816 TGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTA
780 TGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * *
766881 AGAGATAAACTTTGATTCTATCAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAGCATC
845 AGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATC
766946 AATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
910 AATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
*
766987 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * *
767052 GATTTTAAGGAAAATATGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATACCA-TTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
*
767116 CCTAATGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
** ** *
767181 TTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTTTGAAGAAAGTGTTTCTA
196 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* *
767246 GTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAAC-ATGTTTATGGTACCTAATCTT
261 GTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGTACCTAATCCT
* * * *
767310 GAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAACTTTGGTTCTA
325 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
* * **
767375 TCAATAACGGAGGATGAAAAGCTTCTCTCGCAACACCAAAGCATCGGTGTCATGTATCCTAATGA
390 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
* *
767440 AGGGAATGTGGTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGT
455 AGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGT
* * *
767505 CTCATTTATGGATCTAAGTTTGATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAG
520 CTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAG
* * *
767570 GAAACCATCAATATCATTTATCGTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAC
585 GAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAA
** * *
767635 TCCAGATCATTGTTCGAATCCTTGTTTATCTAC-TTTGAGGCATGAACTTAGGGTTTTCAAAAAT
650 TGAAGATCATTGTTCGAATCCTTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAAT
* * * **
767699 TGGTGGGAAAAAAGTGTTTCTTGTGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACT
714 TGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACT
** * * *
767764 ATGTTTATTTTACCTAACCCTGAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTT
779 ATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTT
* * * *
767829 AAGAGATAAACTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
844 AAGAGATAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCA
* * * *
767894 TCAATGTCATGTATCTTAACGAAAGGAATGT-TTTTTTGTTCC
908 TCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * ** * * * * *
767936 TAATCTTCAAA-AGATTAGAGACTGTTGCGAGAATCAATACTTGTTTTATTTAAGGGCCAAACAT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* * * *
768000 TGATTTTCAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCATAGAAAACCATCAATAACATTTA
65 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
* ** * ** *
768065 TCCTAATAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATC
130 TCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * * * **
768130 CTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTCT
195 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * * * * *
768195 TG-CAAAACCAAAGCAACAATATCGTGTATCCTTACGCGAAGACTATGTTTGTGGTGCCTAAT-C
260 TGTGAAAA-CAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* *** * * * *
768258 TAGAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATTT
324 T-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTC
*
768322 TATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
388 TATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* * * *
768387 GAAGGTAGTGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTGATGACAATCAATGCTT
453 GAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTT
* * *
768452 GTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATATGGCAAAGAAAAGATTTTCACGACAA
518 GTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAA
* * * *
768517 AGGAAACCATCAATATCATTTATCCTAATAAAGAGAATGTGTTTATAGTTCCTAATCCCAAAACC
583 AGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACC
*
768582 AATGAAGATCATTGTTCGAATCCTTGTTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAA
648 AATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAA
*
768647 TTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACAC
713 TTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
*
768712 TATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATT
778 TATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
768777 TAAGATATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGCA
843 TAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCA
* * *
768842 TCAAAGTCAGGTATCCTAATGAAGGGAAAGTGTTTTTGGTTCC
908 TCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
768885 CAATCTTGAAA-AGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* * * *
768949 CGATTTAAACGAAAATAGGGCAAA-AAGAAGATTTTCATGCCAAAGAAAACCATCAATATCATTT
65 TGATTTTAAGGAAAATAGGGCAAAGAA-AAGATTTCCATGCCAAAGAAAACCATCAATATCATTT
* * ** ** *
769013 ATCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-TT-TACGAGA
129 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTC--GA
** * * * * * * * *
769076 ATCAATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTGGTGGGAAGAAAGCGTT
192 ATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTT
* * * *
769141 TCTTGTGAAACCAAAGCATCAATACCATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAAT
257 TCTTGTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAAT
*
769206 CCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAACTTTGATT
322 CCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATT
* * * * *
769271 CTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGCATCAAAGTCAGGTATCCTAA
387 CTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
* * * * *
769336 TGAAGCGAA--AGTATTT--TTCCCAATCTTGAA-AAAATGGAGACTATTATGAGAATCAATGCT
452 TGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCT
* * * * ** *
769396 TGTCTCATTTAAGGGTCAAACTTCGATTTAAACAAAAATAGGGCAAA-AAGAAGATTTCCATGCC
517 TGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAA-AAGATTTCCACGCC
* * * **
769460 AAAGAAAACCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAA
581 AAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAA
** * ** * * * * *
769525 TGAATGAAGATC-TT-TACGAGAATCAATGTTTGTGTCATTT-ATGGTAGGAACTTAGTCTTTTC
646 CCAATGAAGATCATTGTTC--GAATCCTTGTTTGTCTCTTTTGA-GGCATGAACTTAGGCTTTTC
* * * *
769587 AAAAACTGGTGGGAAGAAAGCGTTTCTTGTGAAACCAAAGCATCAATACCATGTATCCTTGTGAG
708 AAAAATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * *
769652 AAGATTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATC
773 AAGACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* * * *
769717 TTATTTAAGATATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACA
838 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCA
* * * * *
769782 AAGCATCAAAGTCAGGTATCCTAATGAAGCGAA--AGTATTT--TTCC
903 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
769826 CAATCTTGAAA-A-AATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* * **
769889 CGATTTAAACAAAAATAGGGCAAA-AAGAAGATTTCCATGCCAAAGAAAACCATCAATATCATTT
65 TGATTTTAAGGAAAATAGGGCAAAGAA-AAGATTTCCATGCCAAAGAAAACCATCAATATCATTT
* * ** ** *
769953 ATCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATGAATGAAGATC-TT-TACCAGA
129 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGT-TC-GA
*** * * * * * * **
770016 ATTAATGTTTGTGC-CATTTAAGGTAGGAACTTAGTCTTTTCAAAAACTGGTGGGAAGAAAGCAT
192 ATCCTTGTTTGT-CTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGT
* * * * *
770080 TTCTTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAA
256 TTCTTGTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAA
* *
770145 TCCTGAAAAGAATGGGGATTAGCATGAGTATTCATGTTTACCTTATTTAAGAGATACAA-TTTGA
321 TCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATA-AACTTTGA
* * * * * * *
770209 CTATATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCAACACCAAACCATCAATGTCATGTATCT
385 TTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCC
* * * * * *
770274 TAATGAAGGGAATGTATTTTTTGTTCCTAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAAT
449 TAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAAT
* * * * ** * * * * * *
770339 ACTTGTCTTATTTAAGGGCCAAACATTGACTTTAAGGAAAATATGGTAAGGAAAAGATTTCAATG
514 GCTTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACG
* * * * * **
770404 CCAAAGAAAACCATCAATAACATTTACCCTAATAAAGAGAATGTGTTTATAGTGCCCGATCTCAA
579 CCAAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAA
* * * * *
770469 AACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACA
644 AACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCA
* ** * * * * *
770534 AAAATTGGAGGGAAGAAACCGTTTCTTGCAAAACCAAAGCAACAATATCAAGTATCCTTATGCGA
709 AAAATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGA
* * * * * *
770599 AGACTATGTTTGTGGTACCTAAT-CTGGCAATGAGTGGGGATTAGTATGAGCATTCAAGTTTGTC
774 AGACTATGTTTATGGTACCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* * *
770663 TTTTTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGGTTTTCTCGCAACACCA
838 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCA
**
770728 AAGCATCAATGTCATGTATCCTAATGAAGGGAGGGATGTTTTTGGTTCC
903 AAGCATCAATGTCATGTATCCTAATGAAGGGAATG-TGTTTTTGGTTCC
* * * *
770777 CAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * * * *
770842 GATTTTAAGGAAAATATGGCGAAGAAAAGATTTCTATGCCAAAGGAAACCATCAATAGCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
* * * * *
770907 CCTAAAGAGAAGAATGTGTTTATAGTTCCTAATCTCAAAATCAATGAAGATCATTGCTCGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
**
770972 TTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
196 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* *
771037 GCGAAAACAAATCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT-
261 GTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
* * *
771101 AAAAGAATGTGGATTAGTATGAGTAGTCATGTTTATCTTATTTAAAAGATAAACTTTGATTCTAT
326 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTAT
* * *
771166 CAGTAACGGAGGAAGAAAAGCTTCTCTCGCAGCACCAAAGCATCAATGTCATGTATCCTAATGAA
391 CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * *
771231 GGGAATGTGTTTTTGGTTCCCACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTC
456 GGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTC
* * *
771296 TCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATATGGCAAACAAAAGATTTCCACACCAAAGG
521 TCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGG
* ** *
771361 AAACCATCAATATCATTTATCCTAATGAGGATG-ACGTGTTTACGGTGCCTAATCTTAAAACCAA
586 AAACCATCAATATCATTTATCCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAA
*
771425 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATT
650 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATT
* *
771490 GGTGGGAAGAAAGTGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTA
715 GGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTA
* *
771555 TGTTAATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTA
780 TGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * *
771620 AGAGATAAACTTTGATTCTATCAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAGCATC
845 AGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATC
*
771685 GATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
910 AATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
*
771726 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * * *
771791 GATTTTAAGGAAAATATGGCAAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATACCA-TTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
*
771855 CCTAATGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
** *
771920 TTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTA
196 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* *
771985 GTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAAC-AGGTTTATGGTACCTAATCCT
261 GTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGTACCTAATCCT
* * *
772049 GAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
325 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
* * * *
772114 TCAATAACGGAGGACGAAAAGCTTCTCTCGCAACACCAAAGCATCAGTGTCATGTACCCTAATGA
390 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
* * *
772179 AGGGAATGTGGTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCCTGT
455 AGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGT
* *
772244 CTCATTTATGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAG
520 CTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAG
* *
772309 GAAACCATCAATATCATTTATCCTAATGAGGAGAAATTTGTTTATAATGCCTAATCTCAAAACCA
585 GAAACCATCAATATCATTTATCCTAATGAGGAG-AATGTGTTTATAGTGCCTAATCTCAAAACCA
** * *
772374 ATCCAGATCATTGTTCGAATCCTTGTTTATCTAC-TTTGAGGCATGAACTTAGGGTTTTCAAAAA
649 ATGAAGATCATTGTTCGAATCCTTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAA
* * **
772438 TTGGTGGGAAAAAAGTGTTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCAC
713 TTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
** * *
772503 TATGTTTATTTTACCTAATCCTGAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATT
778 TATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
772568 TAAGAGATAAACTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGC
843 TAAGAGATAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGC
* * * **
772633 ATCAATGTCATGTATCTTAACGAAAGGAATGT-TTTTTCATTCC
907 ATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * * * *
772676 TAATCTTCAAA-AGATTGGAGACTGTTACGACAATCAATACTTGTCTTATTTAAGGGCCAAACAT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* *
772740 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCAAAGAAAACCATCAATAACATTTA
65 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
* ** ** *
772805 TCCTAATAAAAAGAATGTGTTTGA-AGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAAT
130 TCCTAATGAGGAGAATGTGTTT-ATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
* * * * * **
772869 CCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTC
194 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* * * * * * *
772934 TTG-CAAAACAAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCTAAT-
259 TTGTGAAAAC-AAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATC
* *** * * * *
772997 CTGGAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTTTTTTAAGAGATAAACTTTGATT
323 CT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATT
* *
773062 CTATCAATAACGGTGGAAGAAAAGGTTTTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
387 CTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
** *
773127 TGAAGGGAGGGATGTTTTTGGTTCCCAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGC
452 TGAAGGGAATG-TGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGC
* * *
773192 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATATGGCGAAGAAAAGATTTCCACACC
516 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCC
* * *
773257 AAAGGAAACCATCAATAGCATTTATCCTAAAGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAA
581 AAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAA
* *
773322 CCAATGAAGATCATTGTTCGAATCCTTGTTTATCTCTTTTGAGGCATGAACTTAGGCTTTTGAAA
646 CCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAA
* *
773387 AATTGGTGGGAAGAAAGTGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAG
711 AATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
*
773452 ACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTA
776 ACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * *
773517 TTTAAGAGATAAACTTTGATTCTATCAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAG
841 TTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAG
*
773582 CATCGATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
906 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * *
773627 TACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * ** *
773692 GATTTTAAGGAAAATATGGCAAACAAAAGATTTCCACACCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
* ** *
773757 CCTAATGAGGATG-ATATGTTTACGGTGCCTAATTTCAAAACCAATGAAGATCATTGTTCGAATC
131 CCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
773821 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCT
195 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * *
773886 TGTGAAACCAAAGCATCAATACCATGTATCATTATGACAAGACTATGTTTATGGTACCTAATCCT
260 TGTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
773951 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
325 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
* * * *
774016 TCAATAATGGTGGAAGAGAAGGTTCTCTCGTAACACCAAAGCATCAATGTCATGTATCCTAATGA
390 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
*
774081 AGGGAATGTGTTTTTGGTTCCCAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGT
455 AGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGT
* * *
774146 CTCATTTAAGGGTCAAAGTTTGATTTTAAGGAAAATATGGCAAAGAAAAGATTACCACGCCAAAG
520 CTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAG
* *
774211 GAAACCATCAATACCA-TTATCCTAATGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAA
585 GAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAA
**
774275 TGAAGATCATTGTTCGAATCCTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATT
650 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATT
** * * ** *
774340 GGTTTGAAGAAAGTGTTTCTAGTGAAAAGAAAGCATCAACACCATGTATCCTTATGAGAAGAAC-
715 GGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG-ACT
* * * * *
774404 ATGTTTATGGTACCTAATCTTGAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTT
779 ATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTT
* * *
774469 AAGAGATAAACTTTGGTTCTATCAATAACGGAGGACGAAAAGCTTCTCTCGCAACACCAAAGCAT
844 AAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCAT
** *
774534 CGGTGTCATGTATCCTAATGAAGGGAATGTGGTTTTGGTTCC
909 CAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * *
774576 CAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGTCTCATTTATGGATCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * *
774641 GATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
* * **
774706 CGTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAATCCAGATCATTGTTCGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * *
774771 TTGTTTATCTAC-TTTGAGGCATGAACTTAGGGTTTTCAAAAATTGGTGGGAAAAAAGTGTTTCT
196 TTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* ** **
774835 TGCG-AAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTAATCC
260 TGTGAAAAC-AAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* * *
774899 TGAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTTAAGAGATAAACTTTGATTCT
324 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCT
* * * * * *
774964 ATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAAC
389 ATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* * * * * * * * ** *
775029 GAAAGGAATGT-TTTTTTGTTCCTAATCTTCAAAAGATTAGAGACTGTTGCGAGAATCAATACTT
453 GAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTT
* * * * ** * * * *
775093 GTTTTATTTAAGGGCCAAACATTGATTTTCAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCAT
518 GTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAA
* * * ** * ** *
775158 AGAAAACCATCAATAACATTTATCCTAATAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAACA
583 AGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACC
* * * *
775223 AATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAA
648 AATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAA
* ** * * * * * *
775288 TTGGAGGGAAGAAACCGTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTACGCGAAGAC
713 TTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
* * * *** * *
775353 TATGTTTGTGGTGCCTAAT-CTAGAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTT-T
778 TATGTTTATGGTACCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* *
775416 TTAAGAGATAAACTTTGATTTTATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGC
842 TTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGC
* *
775481 ATCAATGTCATGTATCCTAATGAAGGTAGTGTGTTTTTGGTTCC
907 ATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * *
775525 CAATCTTGAAGAGAATGGAGGCTTTGATGACAATCAATGCTTGTCTCTTTTAAGGGTCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * * *
775590 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCACGACAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
* *
775655 CCTAATAAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* *
775720 TTGCTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
196 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * *
775785 GCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACACTATGTTTATGGTACCTAATCCTG
261 GTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
*
775850 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAACTTTGATTCTAT
326 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTAT
* * * * *
775915 CAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAGCATCAAAGTCAGGTATCCTAATGAA
391 CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
* *
775980 GGGAAAGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTATGAGAATCAATGCTTGTC
456 GGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTC
* * * * * * *
776045 TCATTTAAGGGTCAAACTTCGATTTAAACGAAAATAGGGCAAA-AAGAAGATTTTCATGCCAAAG
521 TCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAA-AAGATTTCCACGCCAAAG
* * * ** **
776109 AAAACCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATGAA
585 GAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAA
* * ** ** * * * * * * *
776174 TGAAGATCTTTATGAGAATCAATGTTTGTGTCATTTAAGGTAGGAACTTAGTCTTTTCAAAAACT
650 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATT
* * * * * *
776239 GGTTGGAAGAAAGCGTTTCTTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTA
715 GGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTA
* *
776304 TGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCATGAGTATTCATGTTTGTCTTATTTA
780 TGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * * * * * *
776369 AGAGATAAAATTTGATTCAATGAATAACAGTGGAAAAGAAAGCTTTTCTTGCAACACCAAACCAT
845 AGAGATAAACTTTGATTCTATCAATAACGGTGGAAGA-AAAGCTTCTCTCGCAACACCAAAGCAT
* * * *
776434 CAACGTCATGTATCTTAATGAAGGGAATGTATTTTTCGTTCC
909 CAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * *
776476 TAATCTTGAAA-AGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* * * * * *
776540 TGACTTTAAGGAAAATAGGGTAAGGAAAAGATTTCAATGCGAAAGAAAACCATCAATAACATTTA
65 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
* ** * ** *
776605 CCCTAACAAAGAGAATGTGTTTATAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAATC
130 TCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * * **
776670 CTTGTTTGTCTCTTTTGAGG-GTCGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTC
195 CTTGTTTGTCTCTTTTGAGGCAT-GAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* * * * * * *
776734 TTG-CAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCTAAT-
259 TTGTGAAAA-CAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATC
* ** * *
776797 CTGGAAATGAGCGGGGATTAGTATGAGTATTCAAGTTTGTCTT-TTTAAGAGATAAACTTTGATT
323 CT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATT
* *
776861 CTATCAATAACGGTGGAAGAAAAGGTTCTCTCGCTACACCAAAGCATCAATGTCATGTATCCTAA
387 CTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
* * * * *
776926 TGAAGGTAGTGTGTTTTTGGTTCCCAATCTTAAAGAGAATGGAGACTTTGATGACAATCAATGCT
452 TGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCT
* * **
776991 TGTCTCATTTAAGGGTCTAAGTTTGATTTTATGGAAAATAGGG-AGAAGAAAAGATTTTCACGAT
517 TGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCA-AAGAAAAGATTTCCACGCC
* * *
777055 AAAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATAGTTCTTAATCTCAAAA
581 AAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAA
* * * *
777120 CCAATGAAGATAATTGTTCAAATCCTTGCTTGCCTCTTTTGAGGCATGAACTTAGGCTTTTCAAA
646 CCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAA
*
777185 AATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAC
711 AATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
* * *
777250 ACTATGTTTAGGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTG
776 ACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * *
777315 TTTAAGATATAAACTTTGATTCTATCAATAGCGGTGGAAGAAAAGCTTCTCTTGCGACAACAAAG
841 TTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAG
* * *
777380 CATCAAAGTCAGGTATCCTAATGAAGGGAAAGTG--TTT--TTCC
906 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
*
777421 CAATCTTGAAA-A-AATAGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* * **
777484 CGATTTAAACAAAAATAGGGCAAA-AAGAAGATTTCCATGCCAAAGAAAACCATCAATATCATTT
65 TGATTTTAAGGAAAATAGGGCAAAGAA-AAGATTTCCATGCCAAAGAAAACCATCAATATCATTT
* * ** ** *
777548 ATCCTAATGAGGGGAATGTGTTTATAATGCCTAATGACAAAATTAATGAAGATC-TT-TACCAGA
129 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGT-TC-GA
*** * * * * * * * *
777611 ATTAATGTTTGTGC-CATTTAAGGTAGGAACTTAGTCCTTTCAAAAACTGGTGGGAAGAAAGCGT
192 ATCCTTGTTTGT-CTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGT
* * * * *
777675 TTCTTGTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCTAA
256 TTCTTGTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAA
* ** *
777740 TCCTGAAAAAAGAATGGGGATTAGCATGAGTATTCATGTTTGCCTTATTTAAGAGATAAAATTTG
321 TCCTG--AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTG
* * * * *
777805 ACTCTATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCAACACCAAACCATCAATGTCATGTATC
384 ATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATC
* * * * * *
777870 CTAATGAAGGGAATGTATTTTTTGTTCCTAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAA
448 CTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAA
* * * * ** * * * * * *
777935 TACTTGTCTTATTTAAGGGCCAAACATTGACTTTAAGGAAAATATGGTAAGGAAAAGATTTCAAT
513 TGCTTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCAC
* * * * * **
778000 GCCAAAGAAAACCATCAATAACATTTACCCTAATAAAGAGAATGTGTTTATAGTGCCCGATCTCA
578 GCCAAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCA
* * * * *
778065 AAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTAC
643 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTC
* ** * * * * *
778130 AAAAATTGGAGGGAAGAAACCGTTTCTTGCAAAACCAAAGCAACAATATCAAGTATCCTTATGTG
708 AAAAATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * * * * *
778195 AAGACTATGTTTGTGGTACCTAAT-CTGGCAATGAGTGGGGATTAGTATGAGCATTCAAGTTTGT
773 AAGACTATGTTTATGGTACCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT
* * * *
778259 CTTTTTTAAGAGATAAACTTTGATTCTATCAATAATGGTGGAAGAAAAGGTTTTCTCGCAACACC
837 CTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACC
**
778324 AAAGCATCAATGTCATGTATCCTAATGAAGGGAGGGATGTTTTTGGTTCC
902 AAAGCATCAATGTCATGTATCCTAATGAAGGGAATG-TGTTTTTGGTTCC
* * * *
778374 CAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * * *
778439 GATTTTAAGGAAAATATGGCGAAGAAAAGATTTCCATGCCAAAGGAAACCATCAATAGCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
* * * * *
778504 CCTAAAGAGAAGAATGTGTTTATAGTTCCTAATCTCAAAATCAATGAAGATCATTGCTCGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
**
778569 TTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
196 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* *
778634 GCGAAAACAAATCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT-
261 GTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
* * *
778698 AAAAGAATGTGGATTAGTATAAGTATTCATGTTTATCTTATTTAAAAGATAAACTTTGATTCTAT
326 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTAT
* *
778763 CAGTAACGGTGGAAGAAAAGCTTCTCTCGCAGCACCAAAGCATCAATGTCATGTATCCTAATGAA
391 CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * *
778828 GGGAATATGTTTTTGGTTCCCACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTC
456 GGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTC
* * * *
778893 TCATTTAGGGGTCTAAGTTTGATTTTAAGGAAAATATGGCAAACAAAAGATTTCCACACCAAAGG
521 TCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGG
** *
778958 AAACCATCAATATCATTTATCCTAATGAGGATG-ATGTGTTTACGGTGCCTAATCTTAAAACCAA
586 AAACCATCAATATCATTTATCCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAA
*
779022 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATT
650 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATT
* *
779087 GGTGGGAAGAAAGTGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTA
715 GGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTA
* *
779152 TGTTAATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTA
780 TGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * *
779217 AGAGATAAACTTTGATTCTATCAATAATGGTGGAAGAAAAGGTTCTCTCGTAACACCAAAGCATC
845 AGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATC
*
779282 GATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
910 AATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
*
779323 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * * * *
779388 GATTTTAAGGAAAATATGGCAAAGAAAAGATTTCCACGCCAAAGGAAACCATTAATACCA-TTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
* * *
779452 CCTAATGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAGGATCATTGTTAGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* ** * * *
779517 ATGCATGTCTCTTTTGGGGTATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTA
196 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
*
779582 GTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAAC-ATGTTTATGGTACCTAATCCT
261 GTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAG-ACTATGTTTATGGTACCTAATCCT
* * *
779646 GAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
325 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
* * * * *
779711 TTAATAACGGAGGACGAAAAGCTTCTCTCGCAACACCAAAGCATTAGTGTCATGTATCCTAATGA
390 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
* *
779776 AGGGAATGTGGTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGT
455 AGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGT
* * *
779841 CTCATTTATGGGTCTAATTTTGATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAG
520 CTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAG
* *
779906 GAAACCATCAATATCATTTATCCTAATGAGGAGAAATTTGTTTATAATGCCTAATCTCAAAACCA
585 GAAACCATCAATATCATTTATCCTAATGAGGAG-AATGTGTTTATAGTGCCTAATCTCAAAACCA
** * *
779971 ATCCAGATCATTGTTCGAATCCTTGTTTATCTAC-TTTGAGGCATGAACTTAGGGTTTTCAAAAA
649 ATGAAGATCATTGTTCGAATCCTTGTTTGTCT-CTTTTGAGGCATGAACTTAGGCTTTTCAAAAA
* * **
780035 TTGGTGGGAAAAAAGTGTTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCAC
713 TTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
** * *
780100 TATGTTTATTTTACCTAATCCTGAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATT
778 TATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
780165 TAAGAGATAAACTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGC
843 TAAGAGATAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGC
* * * **
780230 ATCAATGTCATGTATCTTAACGAAAGGAATGT-TTTTTCATTCC
907 ATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * * * *
780273 TAATCTTCAAA-AGATTGGAGACTGTTACGTGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* *
780337 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCAAAGAAAACCATCAATAACATTTA
65 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
* ** ** *
780402 TCCTAATAAAAAGAATGTGTTTGA-AGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAAT
130 TCCTAATGAGGAGAATGTGTTT-ATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
* * * * * * **
780466 CCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGGAACCGTTTC
194 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* * * * * * * *
780531 TTG-CAAAACCAAAGCAACAATATCGTGTATCCTTAAGCGAAGACTATGTTTGTGGTGCCTAAT-
259 TTGTGAAAA-CAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATC
* *** * * * *
780594 CTGGAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTTTTTTAAGAGATAAACTTTGATT
323 CT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATT
* * * *
780659 CTATCAATAACGATGGAAGAAAAGGTTTTCTCGCAACACCAAAGCATCAATGTCATGTAACCTAA
387 CTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
** *
780724 TGAAGGGAGGGATGTTTTTGGTTCCCAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGC
452 TGAAGGGAATG-TGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGC
* * *
780789 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAACTATGGCGAAGAAAAGATTTCCACGCC
516 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCC
* * *
780854 AAAGGAAACCATCAATAGCATTTATCCTAAAGAGGAGAATGTGTTTATAGTTCCTAATCTCAAAA
581 AAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAA
*
780919 CCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAA
646 CCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAA
* * *
780984 AATTGGTGGGAAGAAAGTGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACATG
711 AATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
*
781049 ACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTA
776 ACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
781114 -TTAAGAGATAAACTTTGATTCTATCAATAATGGTGGAAGAGAAGCTTCTCTCGTAACACCAAAG
841 TTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAG
*
781178 CATCGATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
906 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * *
781223 CACTCTTGAAGAGAATGGAGACTTTTGTGAGAATCAATTCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * ** * *
781288 GATTTTAAGGAAAATATGGCAAACAAAAGATTTCCACACCAAAGGAAACTATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
** *
781353 CCTAATGAGGATG-ATGTGTTTACGGTGCCTAATTTCAAAACCAATGAAGATCATTGTTCGAATC
131 CCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* *
781417 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCT
195 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * *
781482 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACCTAATCCT
260 TGTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
781547 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
325 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
* * * * *
781612 TCAATAATGGTGGAAGAGAAGGTTCTCTTGTAACACCAAAGCATCAATGTCATGTATCCTAATGA
390 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
*
781677 AGGGAATGTGTTTTTGGTTCCCAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGT
455 AGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGT
* *
781742 CTCATTTAAGGGTCAAAGTTTGATTTTAAGGAAAATATGGCAAAGAAAAGATTTCCACGCCAAAG
520 CTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAG
* * *
781807 GAAACCATCAATACCA-TTATCCTAATAAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAA
585 GAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAA
**
781871 TGAAGATCATTGTTCGAATCCTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATT
650 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATT
** * * **
781936 GGTTTGAAGAAAGTGTTTCTAGTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAAC-
715 GGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG-ACT
* * * * *
782000 ATGTTTATGGTACCTAATCTTGAAGAGAATGGCGATTAGTATGAGCATTCATGTTTATCTTATTT
779 ATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTT
* * *
782065 AAGAGATAAACTTTGGTTCTATCAATAACGGAGGACGAAAAGCTTCTCTCGCAACACCAAAGCAT
844 AAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCAT
* *
782130 CGATGTCATGTATCCTAATGAAGGGAATGTGGTTTTGGTTCC
909 CAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * *
782172 CAATCTTGAAGAGAATGGAGACTTTTATAAGAATCAATGCTTGTCTCATTTATGGGTCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * *
782237 GATTTTAAGGAAAATAGGGCTAAGAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
* * **
782302 CGTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAATCCAGATCATTGTTCGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * * *
782367 TTGTTTATC-CACTTTGAGGCATGAACTTAGGGTTTTCAAAAATTGGTGGGAAAAAAGTGTTTCT
196 TTGTTTGTCTC-TTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* ** **
782431 TGCG-AAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTAATCC
260 TGTGAAAAC-AAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* * *
782495 TGAAAAGAATGGGGATTAGCATGAGTATTCATATTTGTCTTATTTAAGAGATAAACTTTGATTCT
324 TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCT
* * * * * * *
782560 ATCAATAACAGTGGAAAGAAAAGATTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAAC
389 ATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAAT
* * * * * * * * ** *
782625 GAAAGGAATGT-TTTTTCGTTCCTAATCTTCAAAAGATTAGAGACTATTGCGAGAATCAATACTT
453 GAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTT
* * * ** * * *
782689 GTCTTATTTAAGGGCCAAACATTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCAATGCCAT
518 GTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAA
* * * ** * ** *
782754 AGAAAACCATCAATAACATTTATCCTAATAAAAAGAATGTGTTTGTAGTGCCCGATCTCAAAACA
583 AGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACC
* * * *
782819 AATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTTAGACTTTACAAAAA
648 AATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAA
* ** * * * * * *
782884 TTGGAGGGAAGAAACCGTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTTTGCGAAGAC
713 TTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
* * * *** * *
782949 TATGTTTGTGGTGCCTAAT-CTAGAAATGAGCAGGGATTAGTATGAGCATTCAAGTTTGTCTT-T
778 TATGTTTATGGTACCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
*
783012 TTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACACCAAAGC
842 TTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGC
* *
783077 ATCAATGTCATGTATCCTAATGAAGGTAGTGTGTTTTTGGTTCC
907 ATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * *
783121 CAATCTTGAAGAGAATGGAGACTTTGATGACAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * * *
783186 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCACGACAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
* *
783251 CCTAATAAGGAGAATGTGTTTATAGTTCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
131 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
* * *
783316 TTGCTTGCCTCTTTTGAGGCCTGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
196 TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
* * * *
783381 GAGAAACCAAAGCATCAATACCATGTATCCTAATGAGAACACTATGTTTATGGTACCTAATCCTG
261 GTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
* *
783446 AAAAGAATAGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGATATAAACTTTGATTCTAT
326 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTAT
* * * *** * *
783511 CAAAAACAGTGGAAGAAAAGCTTCTCTTGTGTCAACAAAGCATCAAAGTCA-GTATCCTAATGAA
391 CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
* *
783575 GGGAAAGTGTTTTTGGTTCCCAATCTTGAA-AGGAATGGAGA-TTTTATGAGAATCAATGATTGT
456 GGGAATGTGTTTTTGGTTCCCAATCTTGAAGA-GAATGGAGACTTTTATGAGAATCAATGCTTGT
* * *** * *
783638 CTCATTTAAGGGTC-AAGCTTCGATTTAAACCCAAATAGGGCAAA-AAGATGATTTCCAAGCCAA
520 CTCATTTAAGGGTCTAAG-TTTGATTTTAAGGAAAATAGGGCAAAGAA-AAGATTTCCACGCCAA
* * * ** **
783701 AGAAAACTATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAATGCCTAATGACAAAATG
583 AGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACC
* ** * * * * *
783766 AATGAAGATC-TT-TACCAGAATCAATGTTTG-CGTCATTTAAGGTAGGAACTTAGTCTTTTCAA
648 AATGAAGATCATTGT-TC-GAATCCTTGTTTGTC-TCTTTTGAGGCATGAACTTAGGCTTTTCAA
* * * * *
783828 AAACTAGTGGGAAGAAAGCGTTTCTT-CTGAAACCAAAGCATCAATACGATGTATCCTTGTGAGA
710 AAATTGGTGGGAAGAAAGTGTTTCTTGC-GAAACCAAAGCATCAATACCATGTATCCTTATGAGA
* * * *
783892 AGATTATGTTTATGCTGCCTAATCCTGAAAAGAATGGGGATTAGCATGAGTATTCATGTTTGTCT
774 AGACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCT
* * * * * *
783957 TATTTAAGAGATAAAATTTGACTCTATGAATAACAGTGGAAAGAAAAGCTTTTCTTGCAACACCA
839 TATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCAACACCA
* * * *
784022 AACCATCAATGTCATGTATCTTAATGAAGGGAATGTATTTTTCGTTCC
903 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * *
784070 TAATCTTGAAA-AGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* * * * * *
784134 TCACTTTAAGGAAAATAGGG-TAAGAAAAAGATTTCAATGCGAAAGAAAACCATCAATAACATTT
65 TGATTTTAAGGAAAATAGGGCAAAG-AAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTT
* ** * ** *
784198 ACCCTAACAAAGAGAATGTGTTTATAGTGCCCGATCTCAAAACAAATGAAGATCATTGTTCGAAT
129 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAAT
* * * * * * **
784263 CCTTGTTTGTCTCATTTGAGGGACGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACCGTTTC
194 CCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC
* * * * * * *
784328 TTG-CAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCTAAT-
259 TTGTGAAAA-CAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATC
* * * * * * *
784391 CTGGAAATGAGTGGGGATTAGTATGAGCATTCAAGTTTGTCTTTTTTAAGAGAAAAACTTTGATT
323 CT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATT
* *
784456 CTATCAATAACGGTGGAAGAAAAGGTTTTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
387 CTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
* *
784521 TGAAGGGAAGGATGTTTTTGGTTCCCAATCTTGAAGAGATTGGAGACTTTTATGAGAATCAATGC
452 TGAAGGGAATG-TGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGC
* *
784586 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATATGGCGAAGAAAAGATTTCCACGCC
516 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCC
* * * *
784651 AAAGGAAACCATCAATAGCATTTATCCTAAAGAGGAGAATGTGTTTAAAGTTCCTAATCTCAAAA
581 AAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAA
* **
784716 CCAATGAAGATCATTGTTCAAATCCTTGCATGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAA
646 CCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAA
* * * *
784781 AATTGGTGGGAAGAAAGTGTTTCTTGCAAAAACAAAGCATCAATACCACGTATCTTTATGAGAAG
711 AATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
* * *
784846 ACTAGGTTTATGGTACCTAATCCT-AAAAGAATGTGGATTAGTATGAGTATTCATGTTTATCTTA
776 ACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* *
784910 TTTAAAAGATAAACTTTGATTCTATCAGTAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAG
841 TTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAG
*
784975 CAACAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
906 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * * * *
785020 CACTCTTGAAGAGAACGGAGACTTTTGTGAGAATAAATTCTTGTCCCATTTAAGGGTCTAAGTTT
1 CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
* * *
785085 GATTTTAAGGAAAATAGGGCAAACAAAAGATTTCCACGCCAAAGGAAACCATCAATATCATTTAT
66 GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
** * *
785150 CCTAATGAGGATG-ATGTGTTTACGGTGCCTAATCTCAAAACAAATGAAGATCATTGTTCGAATT
131 CCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* * * *
785214 CTTGTTTGTCACTTTTGAGGCATAAACTTAGGCTTTTGAAAAATTGGTGGGAAGAAAGTGATTCT
195 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * *
785279 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACCTAATCCT
260 TGTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCT
* *
785344 GAAAAGAATGGGGATTAGTATGAGTATTCATCTTTATCTTATTTAAGAGATAAACTTTGATTCTC
325 GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTA
* * *
785409 TCAATAAAGGTGGAAGAAAAGGTTCTCTCGTAACACCAAAGCATCAATGTCATGTATCCTAATGA
390 TCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * *
785474 AGGGAATGTGTGTTTGGTTCCCAATCTTAAAGATAATGGAAACTTTTATGAGAATCAATGCTTGT
455 AGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGT
** *
785539 CTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAATTAAAAGATTTCCACGCCGAAG
520 CTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAG
* *
785604 GAAACTATCAATATCATTTATCCTAATGAGGAGAATGAGTTTATAGTGCCTAATCTCAAAACCAA
585 GAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAA
* * * *
785669 TGAAGATCATTGTTCGAATCTTTGTTTGTCTCTTTTGGGGCTTGAACTTAGGCTTTTTAAAAATT
650 TGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATT
* *
785734 GGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGTATGAATACCATGTATCCTTATGAGAAGACTA
715 GGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTA
* * **
785799 TATTTATGGTGCCTAATATTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
780 TGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * ** * ** * * * *
785864 AGACACAAACTTCGATTCTATCAATAATTGTGGAAAAAAAAGCTTCAGTTG-AGGCACCAATGAA
845 AGAGATAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTCGCA-ACACCAAAGCA
*
785928 TCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCC
908 TCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * * * * ** * **
785971 CTATCCTGAAA-AGATTAGACACTATTACAAGAATGAATGCTTGTCTTTTTTAAGGGTCAAACTT
1 CAAT-CTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* *
786035 TGATTTTAAGGAAATTAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTA
65 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTA
* ** *
786100 TCCTAATTAGGAGAATGTGTTTATAGTGCCTAATCTTGAAACCAAGGAAGATCATTGTTCGAATC
130 TCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATC
* **
786165 CTTGTTTGTCTCTTTTGAGGCATGGACTTAGGCTTTTCAAAAATTGGTGGGAAGATGGTGTTTCT
195 CTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
* * * * * *
786230 TGCT-AAAGCAAAGCATTAATACCATGTATCCTTATGCGAACACTATGTTTGTGGTGCCTAATCC
260 TG-TGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCC
* * ** * * *
786294 -CAAAATGAGTGGGGATTAGTGCGCGTATTCATGTTTGTCTT-TCTTAAGAGACAAACTTTGATT
324 TGAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTATCTTAT-TTAAGAGATAAACTTTGATT
* * * ** * * *
786357 CTATCAATAACGGTGGAGGAAAAGCTTTTCTTGTGACACCAAAGCATTAATTTCATGTATCATAA
387 CTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAA
* * * * * *
786422 TGAAGGGAACGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGA-TTGTTACGAGAATCAAAGC
452 TGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTT-TTATGAGAATCAATGC
* * * * ** * * *
786486 TTCTCTCATTTAATGGTCAAACTTTGATTTTAAATAAAATAGGGCAAAGAAAAGGTTTACATGCC
516 TTGTCTCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCC
* * *
786551 AAAGAAAACAATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCGAAA
581 AAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAA
* * *
786616 CCAATGAAGATGATTGTTCGAATCCTTATTTATCTCTTTTGAGGCATGAACTTAGGCTTTTCAAA
646 CCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAA
* * * *
786681 AATTGGTGGGAAGAAAGCGTTCCTTGC-AAACCAAAGCATCAATATCATGTATCCTTGTGAGAAG
711 AATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
* * *
786745 ACTATGTTTGTGGTGCCTAATCCTGAAATGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
776 ACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
786810 TTTTAGAGATAAA-TTGTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAA
841 TTTAAGAGATAAACTT-TGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAA
*
786874 GCATCAATGTCATTTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
905 GCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * * *
786920 TAATCTTGAAA-AGAATGGAGTCTTTTAGGAGAATCAGTGCTTGTCTCATTTAAGGGTCAAACTT
1 CAATCTT-AAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTT
* * * * *
786984 TGATTTTAAGGAAAATAGGGCAAAGAAAAGTTTTCCAAGCAAAAACAAAAAACCATCAATTTCAT
65 TGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC--CAA-AGAAAACCATCAATATCAT
* *** ** * ** *
787049 TTATCCTAATGAGGAGAATATGTTTATAGTGCCTAAAAGCAAAATGAATGAAGATCCTTACTAGA
127 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGA
* * * * * * * ** **
787114 ATCCATGTTTATCTCATTTGAAGCACGAACTTAAGACTTTTTAAAAATTTATGGGAAGAAAGCAT
192 ATCCTTGTTTGTCTCTTTTGAGGCATGAACTT-AGGCTTTTCAAAAATTGGTGGGAAGAAAGTGT
* * * * **
787179 TTCTTG-CAAAATCAAGGCATCAATATCGA-GTATCCTTATGAGCAGACTATGTTTATGGTGTCT
256 TTCTTGTGAAAA-CAAAGCATCAATA-CCATGTATCCTTATGAGAAGACTATGTTTATGGTACCT
* * *
787242 AATCCTTAAAAAGAATAGGGATTAGTATGAGTATTCATGTTTATCCTT-TTTAAGAGACAAACTT
319 AATCC-TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTAT-CTTATTTAAGAGATAAACTT
* *
787306 TGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCATGAAGGCATCAATG
382 TGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCA--AA-GCATCAATG
787366 AAGATGATTG
Statistics
Matches: 21174, Mismatches: 2773, Indels: 457
0.87 0.11 0.02
Matches are distributed among these distances:
940 370 0.02
941 69 0.00
942 1 0.00
943 16 0.00
944 245 0.01
945 434 0.02
946 424 0.02
947 328 0.02
948 1280 0.06
949 6799 0.32
950 5865 0.28
951 3959 0.19
952 913 0.04
953 103 0.00
954 346 0.02
955 13 0.00
956 2 0.00
957 7 0.00
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.31
Consensus pattern (950 bp):
CAATCTTAAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTT
GATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTAT
CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCC
TTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTT
GTGAAAACAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTAATCCTG
AAAAGAATGGGGATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTAT
CAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCAATGTCATGTATCCTAATGAA
GGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTTTTATGAGAATCAATGCTTGTC
TCATTTAAGGGTCTAAGTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGG
AAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACCAAT
GAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTG
GTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTAT
GTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
GAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTCGCAACACCAAAGCATCA
ATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
Found at i:768828 original size:158 final size:156
Alignment explanation
Indices: 762491--787346 Score: 4519
Period size: 158 Copynumber: 157.1 Consensus size: 156
762481 GAAGAAACCG
* * * * * * * *
762491 TTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGAGCCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* ** * * * *
762556 AT-CTGGAAATGAGCGGGGATTAGTATGAGCATTCAA-GTTTGTCT-TTTTAAGAG-ATAAACTT
65 ATCCT-GAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTT
* *
762617 TGATTCTATCAATAACGGTGGAAGAAAAGG
127 TGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * * * *
762647 TTCTCTCGC-AACACCAAAGCACCAATGTCATTTATCCTAATGA-AGGTAGTGTGTTTTTGGTTC
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGAAG-AATATGTTTATGGTGC
* * * * * * * *
762710 CCAATCTTGAAGAGAATGGAGACTT-TGATGACAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * ** *
762773 TTTGATTTTAAGGAAAATATGG-CAAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
** * * * * * * **
762806 TTT-TCACGACAAAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATAATGCC
1 TTTCTTGCG--AAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * **
762870 TAATGAC--AAAATGAATGAAGATCT-TTACGAGAATCAATGTTTGTGTCATTTAAGGTAGGAAC
63 TAAT-CCTGAAAA-GAATGGAGAT-TATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAAC
* *
762932 -TT-AGTCTTTTCAAAAACTGGTGGGAAG-AAAGC
125 TTTGATTC-TATCAAAAAC-GGT-GGAAGAAAAGC
* ** * *
762964 GTTTCTTGTGAAACCAAAGCATCAATA-CGATGTATCCTTGTGAGAAGATTATGTTTATGGTCCC
1 -TTTCTTGCGAAA-CAAAGCATCAATATC-ATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* ** * * * *
763028 TAATCCTGAAAAGAAT-AAGGATTAGCATGAGTATTC-ATGTTTGCCTTATTTAAGAG-ATAAAA
63 TAATCCTGAAAAGAATGGA-GATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAAC
* * * *
763090 TTTGATTCAATCAATAACAGTGGAAAAGAAAGC
125 TTTGATTCTATCAAAAACGGTGGAAGA-AAAGC
* ** * * * * * * *
763123 TTTTCTTGC-AACACCAAACCATCAACGTCATGTATCTTAATGA-AGGGAATGTATTTTTCGTTC
1 -TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGC
* * * ** * *** *
763186 CTAATCTTGAAAAGATTGGAGACTATTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
62 CTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
** * *
763251 TGACTT-TAAGGAAAATA-GG-GTAAGGAAAAGA
127 TGA-TTCT-ATCAAAA-ACGGTGGAA-GAAAAGC
* * * * * * ** * * * *
763282 TTTCAATG-GCAAAGAAAACCATCAATAACATTTACCCTAACAAAAAGAATGTGTTTGTAGTGCC
1 TTTC-TTGCG-AAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
** * * * * * ** ** * * * **
763346 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
763410 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * * *
763440 GTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGAGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* ** * * * *
763505 AAT-CTGGAAATGAGCGGGGATTAGTATGAGCATTCAA-GTTTGTCT-TTTTAAGAG-ATAAACT
64 AATCCT-GAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * *
763566 TTGATTTTATCAATAACGGTGGAAGAAAAGG
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * * * *
763597 TTCTCTCGC-AACACCAAAGCACCAATGTCATTTATCCTAATGA-AGGTAGTGTGTTTTTGGTTC
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGAAG-AATATGTTTATGGTGC
* * * ** * * *
763660 CCAATCTTGAAGAGAATGGAGACTT-TGCTGACAATCAATGTTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * *
763723 TTTGATTTTAAGGAAAATA-GG-GCAAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * ** *
763756 TTT-TCACGACAAAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATATTTCC
1 TTTCTTGCG--AAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * * ** ** * * * * *
763820 TAAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGCCTCTTTTGAGGCATGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
763884 AGGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * *
763915 TTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACACTATGTTTATGGTACCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * * *
763980 ATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGATATAAACTTTG
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAGGTATAAACTTTG
*
764044 ATTCTATCAATAACGGTGGAAGAAAAGC
129 ATTCTATCAAAAACGGTGGAAGAAAAGC
* * * *
764072 TTCTCTTGCGACAACAAAGCATCAA-AGTCAGGTATCCTAATGA-AGGGAA-AGTGTTTTTGGTT
1 TT-TCTTGCGA-AACAAAGCATCAATA-TCATGTATCCTAATGAGA-AGAATA-TGTTTATGGTG
* * * *
764134 CCCAATCTTGAAAAGAATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAAA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAA
* * * * *
764197 CTTCGATT-TAAACGAAAATA-GG-GAAAAAAGAAGAT
124 CTTTGATTCT-ATC-AAAA-ACGGTGGAAGAA-AAG-C
* * * * * ** * **
764232 TTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATAATGCCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * **
764297 ATGAC--AAAATGAATGAAGATCT-TTACGAGAATCAATGTTTGTGTCATTTAAGGTAGGAAC-T
65 AT-CCTGAAAA-GAATGGAGAT-TATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* *
764358 T-AGTCTTTTCAAAAACTGGTGGGAAG-AAAGC
127 TGATTC-TATCAAAAAC-GGT-GGAAGAAAAGC
* ** *
764389 GTTTCTTGTGAAACCAAAGCATCAATA-CGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCC
1 -TTTCTTGCGAAA-CAAAGCATCAATATC-ATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
** * * * *
764453 TAATCCTGAAAAGAATAGG-GATTAGCATGAGTATTC-ATGTTTGCCTTATTTAAGAG-ATAAAA
63 TAATCCTGAAAAGAAT-GGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAAC
* * ** *
764515 TTTGATTCAATCAATAACATTGGAAAAGAAAGC
125 TTTGATTCTATCAAAAACGGTGGAAGA-AAAGC
* ** * * * * * * *
764548 TTTTCTTGC-AACACCAAACCATCAACGTCATGTATCTTAATGA-AGGGAATGTATTTTTCGTTC
1 -TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGC
* * * * ** * *** *
764611 CTAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
62 CTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
** * *
764676 TGACTT-TAAGGAAAATA-GG-GTAAGGAAAAGA
127 TGA-TTCT-ATCAAAA-ACGGTGGAA-GAAAAGC
* * * * * * * ** * * * * *
764707 TTTCAATGCCAAAGAAAACCATCAATAACATTTACCCTAACAAAAAGAATGTGTTTGTAGTGCCC
1 TTTC-TTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * ** ** * * * **
764772 GAT-CTCAAAACAAATGAAGATCT-TTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
64 AATCCTGAAAA-GAATGGAGAT-TATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
764835 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * * * *
764865 GTTTCATGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGAGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * *
764930 AAT-CTGGAAATGAACGGGGATTAGTATGAGCATTCAA-GTTTGTCT-TTTTAAGAG-ATAAACT
64 AATCCT-GAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* *
764991 TTGATTCTATCAATAACGGTGGAAGAAAAGG
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * * * *
765022 TTCTCTCGC-AACACCAAAGCACCAATGTCATTTATCCTAATGA-AGGTAGTGTGTTTTTGGTTC
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGAAG-AATATGTTTATGGTGC
* * * * * * *
765085 CCAATCTTGAAGAGAATGGAGACTT-TGATGACAATCAATGCTTGTCTCATTTAAGGGTCTAAA-
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * ** *
765148 TTTGATTTTAAGGAAAATATGG-CAAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
** * * * * * * * *
765181 TTT-TCACGACAAAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATAGTTCC
1 TTTCTTGCG--AAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * * ** ** * * * * *
765245 TAATCC-CAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGCCTCTTTTGAGGCATGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
765309 AGGCTT-T-TCAAAAATTGGTGGGAA-AAAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * ** * ** *
765340 TTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTA
1 TTTCTTGCGAAAC-AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* ** * * *
765405 ATCCTGAAAAGAATGGGGATTAGCATGAGTATTC-ATATTTGTCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* *
765468 GATTCTATCAATAACAGTGGAAAGAAAAGC
128 GATTCTATCAAAAACGGTGG-AAGAAAAGC
* * * * * * ** *
765498 TTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACGA-AAGGA-ATGTTTTTTCATTCC
1 -TTTCTTGCGA-AACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATG-TTTATGGTGCC
* * * * * * * ** * *** *
765561 TAATCTTCAAAAGATTGGAGACTGTTACGACAATCAATACTTGTCTTATTTAAGGGCCAAACATT
63 TAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTTT
* ** * *
765626 GATTTTAAGGAAAATA-GG-GCAAAGAAAAGA
128 GATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
* * * * * * * * * *
765656 TTTCAATGCCAAAAAAAACCATCAATAACATTTATCCTAATAAAAAGAATGTGTTTGA-AGTGCC
1 TTTC-TTG-CGAAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTT-ATGGTGCC
** * * * * * * ** * * * **
765720 CGAT-CTCAAAACAAATGAAGATCATTGTTAGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
765784 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * *
765814 GTTTCTTGCAAAACAAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCT
1 -TTTCTTGCGAAAC-AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * **
765879 AAT-CTGGAAATGAGCA-GG-GATTAGTATGAGCATTCAA-GTTTGTCTTTTTTAAGAG-ATAAA
64 AATCCT-GAAA--AGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAA
* *
765939 CTTTGATTCTATCAATAACGGTGGAAGAAAAGGT
124 CTTTGATTCTATCAAAAACGGTGGAAGAAAA-GC
* * * ** * *
765973 TTTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAGGGATGTTTTTGGTTC
1 TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGA-ATATGTTTATGGTGC
* * * * * * *
766036 CCAATCTTGAAGAGATTGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * * *
766099 TTTGATTTTAAGGAAAATATGG-CGAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
** * * * * * * * * * *
766132 TTTCCACGCCAAAGGAAACCATCAATAGCATTTATCCTAAAGAGGAGAATGTGTTTATAGTTCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * ** ** * * * * *
766197 AAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTATCTCTTTTGAGGCATGAACTTA
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT-
* * * *
766261 GGCTT-T-TGAAAAATTGGTGGGAAG-AAAG-
127 TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * *
766289 TGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACC
1 T--TTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * * *
766354 TAATCTTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGAG-ATAAACT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * *
766417 TTGATTCTATCAATAATGGTGGAAGAGAAG-
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
766447 GTTCTCT-CGTAACACCAAAGCATCGATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 TTTCT-TGCG-AA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTG
* * * * * *
766510 CCCACTCTTGAAGAGAATGGAGACTT-TTGTGAGAATCAAT-TCTTGTCTCATTTAAGGGTCT-A
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGT-TTGTCTCATTTAA-GGTATAA
* * ** * ** * *
766572 AGTTTGATTTTAAGGAAAATATGG-CAAATAAAAGA
123 ACTTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
*** * * * * * * *
766607 TTTCCACACCAAAGGAAACCATCAATATCATTTATCCTAATGAGGATG-ATATGTTTACGGTGCG
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGA-GAAGAATATGTTTATGGTGCC
* * * * * * ** ** * * * *
766671 TAAT-TTCAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
766735 AGGCTT-T-TGAAAAATTGGTGGGAAG-AAAG-
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * * * *
766764 TGATTCTTGTGAAACCAAAGCATCAATACCATGTATCATTATGACAAGACTATGTTTATGGTACC
1 T--TTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * *
766829 TAATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGAG-ATAAACT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * *
766892 TTGATTCTATCAATAATGGTGGAAGAGAAG-
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * *
766922 GTTCTCT-CGTAACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 TTTCT-TGCG-AA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTG
* * * *
766985 CCCAAT-CTTAAAGAGAATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAA
61 CCTAATCCTGAAA-AGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAA
* * ** * ** *
767047 AGTTTGATTTTAAGGAAAATATGG-CAAAGAAAAGA
123 ACTTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
** * * * * * * * *
767082 TTTCCACGCCAAAGAAAACCATCAATACCAT-TATCCTAATGAGGAGAATGTGTTTATAGTTCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * ** ** ** * * * *
767146 AAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGCATGTCTCTTTTGAGGCATGAACTTA
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT-
* * * * *
767210 GGCTT-T-TCAAAAATTGGTTTGAAG-AAAGTG
127 TGATTCTATCAAAAA-CGG-TGGAAGAAAAG-C
* * * * * * *
767240 TTTCTAGTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAACATGTTTATGGTACCTA
1 TTTCTTGCG-AAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * * * *
767305 ATCTTGAAGAGAATGGCGATTAGTATGAGCATTC-ATGTTTATCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* * * *
767368 GGTTCTATCAATAACGGAGGATGAAAAGC
128 GATTCTATCAAAAACGGTGGAAGAAAAGC
* ** * * * *
767397 TTCTCTCGC-AACACCAAAGCATCGGTGTCATGTATCCTAATGA-AGGGAATGTGGTTT-TGGTT
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATAT-GTTTATGGTG
* * * * * * *
767459 CCCAATCTTGAAGAGAATGGAGACTT-TTATAAGAATCAATGCTTGTCTCATTTATGG-ATCTAA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAAGGTAT-AAA
* * ** * *
767522 GTTTGATTTTAAGGAAAATA-GG-GCTAAGAAAAGA
124 CTTTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * *
767556 TTTCCACGCCAAAGGAAACCATCAATATCATTTATCGTAATGAGGAGAATATGTTTATAGTGCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * ** * * ** ** * * * *
767621 AAT-CTCAAAACCACTCCAGATCATTGTTCGAATCCTTGTTTATCT-ACTTTGAGGCATGAACTT
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCA-TTTAAGGTATAAACTT
* * * *
767684 AGGGTT-T-TCAAAAATTGGTGGGAA-AAAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * ** * ** *
767715 TTTCTTGTGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTA
1 TTTCTTGCGAAAC-AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * ** * * *
767780 ACCCTGAAAAGAATGGGGATTAGCATGAGTATTC-ATATTTGTCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* *
767843 GATTCTATCAATAACAGTGGAAAGAAAAGC
128 GATTCTATCAAAAACGGTGG-AAGAAAAGC
* * * * * * * *
767873 TTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACGA-AAGGA-ATGTTTTTTTGTTCC
1 -TTTCTTGCGA-AACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATG-TTTATGGTGCC
* * * * * * ** ** * * *** *
767936 TAATCTTCAAAAGATTAGAGACTGTTGCGAGAATCAATACTTGTTTTATTTAAGGGCCAAACATT
63 TAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTTT
* * *
768001 GATT-T-TCAGGAAAATAGG-GCAAAGAAAAGA
128 GATTCTATCA--AAAA-CGGTG-GAAGAAAAGC
* * * * * * * * * *
768031 TTTCAATGCCATAGA-AAACCATCAATAACATTTATCCTAATAAAAAGAATGTGTTTGTAGTGCC
1 TTTC-TTGCGA-A-ACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
** * * * * * ** ** * * * **
768095 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
768159 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * * *
768189 GTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTACGCGAAGACTATGTTTGTGGTGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * *
768254 AAT-CTAGAAATGAGCA-GG-GATTAGTATGAGCATTCAA-GTTTGTCT-TTTTAAGAG-ATAAA
64 AATCCT-GAAA--AGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAA
* * *
768313 CTTTGATTTTATCAATAACGGTGGAAGAAAAGG
124 CTTTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
768346 TTCTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGTAGTGTGTTTTTGGTTC
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGAAG-AATATGTTTATGGTGC
* * * * * * * *
768409 CCAATCTTGAAGAGAATGGAGACTT-TGATGACAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * ** *
768472 TTTGATTTTAAGGAAAATATGG-CAAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
** * * * * * * *
768505 TTT-TCACGACAAAGGAAACCATCAATATCATTTATCCTAAT-AAAGAGAATGTGTTTATAGTTC
1 TTTCTTGCG--AAA-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGC
* * * * * ** ** * * * * *
768568 CTAATCC-CAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGCCTCTTTTGAGGCATGAACT
62 CTAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACT
* * * *
768632 TAGGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
126 T-TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * *
768664 TTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACACTATGTTTATGGTACCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * * *
768729 ATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGATATAAACTTTG
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAGGTATAAACTTTG
*
768793 ATTCTATCAATAACGGTGGAAGAAAAGC
129 ATTCTATCAAAAACGGTGGAAGAAAAGC
* * * *
768821 TTCTCTTGCGACAACAAAGCATCAA-AGTCAGGTATCCTAATGA-AGGGAA-AGTGTTTTTGGTT
1 TT-TCTTGCGA-AACAAAGCATCAATA-TCATGTATCCTAATGAGA-AGAATA-TGTTTATGGTG
* * * *
768883 CCCAATCTTGAAAAGAATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAAA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAA
* * * * *
768946 CTTCGATT-TAAACGAAAATA-GG-GCAAAAAGAAGAT
124 CTTTGATTCT-ATC-AAAA-ACGGTGGAAGAA-AAG-C
* * * * * ** * **
768981 TTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATAATGCCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * **
769046 ATGAC--AAAATGAATGAAGATCT-TTACGAGAATCAATGTTTGTGTCATTTAAGGTAGGAAC-T
65 AT-CCTGAAAA-GAATGGAGAT-TATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* *
769107 T-AGTCTTTTCAAAAACTGGTGGGAAG-AAAGC
127 TGATTC-TATCAAAAAC-GGT-GGAAGAAAAGC
* * ** *
769138 GTTTCTTGTGAAACCAAAGCATCAATACCATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * *
769203 AATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGATATAAACTTT
64 AATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAGGTATAAACTTT
*
769267 GATTCTATCAATAACGGTGGAAGAAAAGC
128 GATTCTATCAAAAACGGTGGAAGAAAAGC
* * *
769296 TTCTCTTGCGACAACAAAGCATCAA-AGTCAGGTATCCTAATGA-AGCGAA-A-GTATT-T--TT
1 TT-TCTTGCGA-AACAAAGCATCAATA-TCATGTATCCTAATGAGA-AGAATATGT-TTATGGTG
* * * * *
769354 CCCAATCTTGAAAA-AATGGAGACTATTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAAAC
61 CCTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* * * * * *
769417 TTCGATT-TAAACAAAAATAGG-GCAAAAAGAAGA
125 TTTGATTCT-ATCAAAAA-CGGTGGAAGAA-AAGC
* * * * * ** * **
769450 TTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATAATGCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * **
769515 AATGAC--AAAATGAATGAAGATCT-TTACGAGAATCAATGTTTGTGTCATTTATGGTAGGAAC-
64 AAT-CCTGAAAA-GAATGGAGAT-TATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACT
* *
769576 TT-AGTCTTTTCAAAAACTGGTGGGAAG-AAAGC
126 TTGATTC-TATCAAAAAC-GGT-GGAAGAAAAGC
* * ** *
769608 GTTTCTTGTGAAACCAAAGCATCAATACCATGTATCCTTGTGAGAAGATTATGTTTATGGTGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * *
769673 AATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGATATAAACTTT
64 AATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAGGTATAAACTTT
*
769737 GATTCTATCAATAACGGTGGAAGAAAAGC
128 GATTCTATCAAAAACGGTGGAAGAAAAGC
* * *
769766 TTCTCTTGCGACAACAAAGCATCAA-AGTCAGGTATCCTAATGA-AGCGAA-A-GTATT-T--TT
1 TT-TCTTGCGA-AACAAAGCATCAATA-TCATGTATCCTAATGAGA-AGAATATGT-TTATGGTG
* * * *
769824 CCCAATCTTGAAAA-AATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAAA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAA
* * * * * *
769886 CTTCGATT-TAAACAAAAATAGG-GCAAAAAGAAGA
124 CTTTGATTCT-ATCAAAAA-CGGTGGAAGAA-AAGC
* * * * * ** * **
769920 TTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATAATGCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * ** * **
769985 AATGAC--AAAATGAATGAAGATCT-TTACCAGAATTAATGTTTGTGC-CATTTAAGGTAGGAAC
64 AAT-CCTGAAAA-GAATGGAGAT-TATTATGAGAATCAATGTTTGT-CTCATTTAAGGTATAAAC
* *
770046 -TT-AGTCTTTTCAAAAACTGGTGGGAAG-AAAGC
125 TTTGATTC-TATCAAAAAC-GGT-GGAAGAAAAGC
* ** *
770078 ATTTCTTGTGAAACCAAAGCATCAATA-CGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCC
1 -TTTCTTGCGAAA-CAAAGCATCAATATC-ATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* ** * ** *
770142 TAATCCTGAAAAGAATGGGGATTAGCATGAGTATTC-ATGTTTACCTTATTTAAGAG-ATACAA-
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATA-AAC
* * * *
770204 TTTGACTATATCAATAACAGTGGAAAGAAAAGC
125 TTTGATTCTATCAAAAACGGTGG-AAGAAAAGC
* * * * * * * * *
770237 TTTTCTTGC-AACACCAAACCATCAATGTCATGTATCTTAATGA-AGGGAATGTATTTTTTGTTC
1 -TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGC
* * * * ** * *** *
770300 CTAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
62 CTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
** * *
770365 TGACTT-TAAGGAAAATATGGT--AAGGAAAAGA
127 TGA-TTCT-ATCAAAA-ACGGTGGAA-GAAAAGC
* * * * * * * * * *
770396 TTTCAATGCCAAAGAAAACCATCAATAACATTTACCCTAAT-AAAGAGAATGTGTTTATAGTGCC
1 TTTC-TTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGCC
** * * * * * ** ** * * * **
770460 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
770524 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * * *
770554 GTTTCTTGCAAAACCAAAGCAACAATATCAAGTATCCTTATGCGAAGACTATGTTTGTGGTACCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * * **
770619 AAT-CTGGCAATGAGTGGGGATTAGTATGAGCATTCAA-GTTTGTCTTTTTTAAGAG-ATAAACT
64 AATCCT-GAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* *
770681 TTGATTCTATCAATAACGGTGGAAGAAAAGGT
126 TTGATTCTATCAAAAACGGTGGAAGAAAA-GC
* * * ** * *
770713 TTTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAGGGATGTTTTTGGTTC
1 TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGA-ATATGTTTATGGTGC
* * * * * * *
770776 CCAATCTTGAAGAGATTGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * * *
770839 TTTGATTTTAAGGAAAATATGG-CGAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
* * * * * * * * *
770872 TTTCTATGCCAAAGGAAACCATCAATAGCATTTATCCTAAAGAGAAGAATGTGTTTATAGTTCCT
1 TTTCT-TGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * * ** ** * * * *
770937 AAT-CTCAAAATCAATGAAGATCATTGCT-CGAATCCTTGCATGTCTCTTTTGAGGCATGAACTT
64 AATCCTGAAAA-GAATGGAGATTATT-ATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
771000 AGGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * *
771031 TTTCTTGCGAAAACAAATCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTA
1 TTTCTTGCG-AAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * *
771096 ATCCT-AAAAGAATGTG-GATTAGTATGAGTAGTC-ATGTTTATCTTATTTAAAAG-ATAAACTT
65 ATCCTGAAAAGAATG-GAGATTATTATGAG-AATCAATGTTTGTCTCATTT-AAGGTATAAACTT
** *
771157 TGATTCTATCAGTAACGGAGGAAGAAAAGC
127 TGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * * *
771187 TTCTCTCGCAGCACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTTCC
1 TT-TCTTGC-GAAACAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGCC
* * * * * * *
771251 CACTCTTGAAGAGAATGGAGACTT-TTGTGAGAATCAAT-TCTTGTCTCATTTAAGGGTCT-AAG
63 TAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGT-TTGTCTCATTTAA-GGTATAAAC
* ** * ** * *
771313 TTTGATTTTAAGGAAAATATGG-CAAACAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
*** * * * * * ** *
771346 TTTCCACACCAAAGGAAACCATCAATATCATTTATCCTAATGAGGATG-ACGTGTTTACGGTGCC
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGA-GAAGAATATGTTTATGGTGCC
* * * * * ** ** * * * *
771410 TAAT-CTTAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
771474 AGGCTT-T-TGAAAAATTGGTGGGAAG-AAAG-
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * * *
771503 TGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTAATGGTACC
1 T--TTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * *
771568 TAATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGAG-ATAAACT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * *
771631 TTGATTCTATCAATAATGGTGGAAGAGAAG-
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
771661 GTTCTCT-CGTAACACCAAAGCATCGATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 TTTCT-TGCG-AA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTG
* * * *
771724 CCCAAT-CTTAAAGAGAATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAA
61 CCTAATCCTGAAA-AGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAA
* * ** * ** *
771786 AGTTTGATTTTAAGGAAAATATGG-CAAAGAAAAGA
123 ACTTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
** * * * * * * * *
771821 TTTCCACGCCAAAGGAAACCATCAATACCAT-TATCCTAATGAGGAGAATGTGTTTATAGTTCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * ** ** ** * * * *
771885 AAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGCATGTCTCTTTTGAGGCATGAACTTA
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT-
* * * *
771949 GGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
127 TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * * * * *
771979 TTTCTAGTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAACAGGTTTATGGTACCTA
1 TTTCTTGCG-AAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * * *
772044 ATCCTGAAGAGAATGGCGATTAGTATGAGCATTC-ATGTTTATCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* * *
772107 GATTCTATCAATAACGGAGGACGAAAAGC
128 GATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
772136 TTCTCTCGC-AACACCAAAGCATCAGTGTCATGTACCCTAATGA-AGGGAATGTGGTTT-TGGTT
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATAT-GTTTATGGTG
* * * * ** * *
772198 CCCAATCTTGAAGAGAATGGAGACTT-TTATAAGAATCAATGCCTGTCTCATTTATGGGTCT-AA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTA-AGGTATAAA
* * ** * *
772261 GTTTGATTTTAAGGAAAATA-GG-GCTAAGAAAAGA
124 CTTTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * **
772295 TTTCCACGCCAAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAAATTTGTTTATAATGCC
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAG-AATATGTTTATGGTGCC
* * ** * * ** ** * * * *
772360 TAAT-CTCAAAACCAATCCAGATCATTGTTCGAATCCTTGTTTATCT-ACTTTGAGGCATGAACT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCA-TTTAAGGTATAAACT
* * * *
772423 TAGGGTT-T-TCAAAAATTGGTGGGAA-AAAAGTG
126 T-TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * ** * ** *
772455 TTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTA
1 TTTCTTGCGAAAC-AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* ** * * *
772520 ATCCTGAAAAGAATGGGGATTAGCATGAGTATTC-ATATTTGTCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* *
772583 GATTCTATCAATAACAGTGGAAAGAAAAGC
128 GATTCTATCAAAAACGGTGG-AAGAAAAGC
* * * * * * ** *
772613 TTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACGA-AAGGA-ATGTTTTTTCATTCC
1 -TTTCTTGCGA-AACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATG-TTTATGGTGCC
* * * * * * * ** * *** *
772676 TAATCTTCAAAAGATTGGAGACTGTTACGACAATCAATACTTGTCTTATTTAAGGGCCAAACATT
63 TAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTTT
* ** * *
772741 GATTTTAAGGAAAATA-GG-GCAAAGAAAAGA
128 GATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
* * * * * * * * * *
772771 TTTCAATGCCAAAGAAAACCATCAATAACATTTATCCTAATAAAAAGAATGTGTTTGA-AGTGCC
1 TTTC-TTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTT-ATGGTGCC
** * * * * * ** ** * * * **
772835 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
772899 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * *
772929 GTTTCTTGCAAAACAAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCT
1 -TTTCTTGCGAAAC-AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * **
772994 AAT-CTGGAAATGAGCA-GG-GATTAGTATGAGCATTCAA-GTTTGTCTTTTTTAAGAG-ATAAA
64 AATCCT-GAAA--AGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAA
* *
773054 CTTTGATTCTATCAATAACGGTGGAAGAAAAGGT
124 CTTTGATTCTATCAAAAACGGTGGAAGAAAA-GC
* * * ** * *
773088 TTTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAGGGATGTTTTTGGTTC
1 TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGA-ATATGTTTATGGTGC
* * * * * * *
773151 CCAATCTTGAAGAGATTGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * * *
773214 TTTGATTTTAAGGAAAATATGG-CGAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
*** * * * * * * * * * *
773247 TTTCCACACCAAAGGAAACCATCAATAGCATTTATCCTAAAGAGGAGAATGTGTTTATAGTTCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * ** ** * * * * *
773312 AAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTATCTCTTTTGAGGCATGAACTTA
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT-
* * * *
773376 GGCTT-T-TGAAAAATTGGTGGGAAG-AAAG-
127 TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * *
773404 TGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACC
1 T--TTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * *
773469 TAATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGAG-ATAAACT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * *
773532 TTGATTCTATCAATAATGGTGGAAGAGAAG-
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
773562 GTTCTCT-CGTAACACCAAAGCATCGATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 TTTCT-TGCG-AA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTG
* * * * *
773625 CCTACTCTTGAAGAGAATGGAGACTT-TTGTGAGAATCAAT-TCTTGTCTCATTTAAGGGTCT-A
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGT-TTGTCTCATTTAA-GGTATAA
* * ** * ** * *
773687 AGTTTGATTTTAAGGAAAATATGG-CAAACAAAAGA
123 ACTTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
*** * * * * * *
773722 TTTCCACACCAAAGGAAACCATCAATATCATTTATCCTAATGAGGATG-ATATGTTTACGGTGCC
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGA-GAAGAATATGTTTATGGTGCC
* * * * * * ** ** * * * *
773786 TAAT-TTCAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
773850 AGGCTT-T-TGAAAAATTGGTGGGAAG-AAAG-
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * * * *
773879 TGATTCTTGTGAAACCAAAGCATCAATACCATGTATCATTATGACAAGACTATGTTTATGGTACC
1 T--TTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * *
773944 TAATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGAG-ATAAACT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * *
774007 TTGATTCTATCAATAATGGTGGAAGAGAAG-
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * *
774037 GTTCTCT-CGTAACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 TTTCT-TGCG-AA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTG
* * * *
774100 CCCAAT-CTTAAAGAGAATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAA
61 CCTAATCCTGAAA-AGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAA
* * ** * ** *
774162 AGTTTGATTTTAAGGAAAATATGG-CAAAGAAAAGA
123 ACTTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
* ** * * * * * * * *
774197 TTACCACGCCAAAGGAAACCATCAATACCAT-TATCCTAATGAGGAGAATGTGTTTATAGTTCCT
1 TT-TCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * ** ** ** * * * *
774261 AAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGCATGTCTCTTTTGAGGCATGAACTTA
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT-
* * * * *
774325 GGCTT-T-TCAAAAATTGGTTTGAAG-AAAGTG
127 TGATTCTATCAAAAA-CGG-TGGAAGAAAAG-C
* * * * * * * *
774355 TTTCTAGTGAAAAGAAAGCATCAACACCATGTATCCTTATGAGAAGAACATGTTTATGGTACCTA
1 TTTCTTGCG-AAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * * * *
774420 ATCTTGAAGAGAATGGCGATTAGTATGAGCATTC-ATGTTTATCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* * * *
774483 GGTTCTATCAATAACGGAGGACGAAAAGC
128 GATTCTATCAAAAACGGTGGAAGAAAAGC
* ** * * * *
774512 TTCTCTCGC-AACACCAAAGCATCGGTGTCATGTATCCTAATGA-AGGGAATGTGGTTT-TGGTT
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATAT-GTTTATGGTG
* * * * * * *
774574 CCCAATCTTGAAGAGAATGGAGACTT-TTATAAGAATCAATGCTTGTCTCATTTATGG-ATCTAA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAAGGTAT-AAA
* * ** * *
774637 GTTTGATTTTAAGGAAAATA-GG-GCTAAGAAAAGA
124 CTTTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * *
774671 TTTCCACGCCAAAGGAAACCATCAATATCATTTATCGTAATGAGGAGAATATGTTTATAGTGCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * ** * * ** ** * * * *
774736 AAT-CTCAAAACCAATCCAGATCATTGTTCGAATCCTTGTTTATCT-ACTTTGAGGCATGAACTT
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCA-TTTAAGGTATAAACTT
* * * *
774799 AGGGTT-T-TCAAAAATTGGTGGGAA-AAAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * ** * ** *
774830 TTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTA
1 TTTCTTGCGAAAC-AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* ** * * *
774895 ATCCTGAAAAGAATGGGGATTAGCATGAGTATTC-ATATTTGTCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* *
774958 GATTCTATCAATAACAGTGGAAAGAAAAGC
128 GATTCTATCAAAAACGGTGG-AAGAAAAGC
* * * * * * * *
774988 TTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACGA-AAGGA-ATGTTTTTTTGTTCC
1 -TTTCTTGCGA-AACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATG-TTTATGGTGCC
* * * * * * ** ** * * *** *
775051 TAATCTTCAAAAGATTAGAGACTGTTGCGAGAATCAATACTTGTTTTATTTAAGGGCCAAACATT
63 TAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTTT
* * *
775116 GATT-T-TCAGGAAAATAGG-GCAAAGAAAAGA
128 GATTCTATCA--AAAA-CGGTG-GAAGAAAAGC
* * * * * * * * * *
775146 TTTCAATGCCATAGA-AAACCATCAATAACATTTATCCTAATAAAAAGAATGTGTTTGTAGTGCC
1 TTTC-TTGCGA-A-ACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
** * * * * * ** ** * * * **
775210 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
775274 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * * *
775304 GTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTACGCGAAGACTATGTTTGTGGTGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * *
775369 AAT-CTAGAAATGAGCA-GG-GATTAGTATGAGCATTCAA-GTTTGTCT-TTTTAAGAG-ATAAA
64 AATCCT-GAAA--AGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAA
* * *
775428 CTTTGATTTTATCAATAACGGTGGAAGAAAAGG
124 CTTTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
775461 TTCTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGTAGTGTGTTTTTGGTTC
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGAAG-AATATGTTTATGGTGC
* * * * * * * * * *
775524 CCAATCTTGAAGAGAATGGAGGCTT-TGATGACAATCAATGCTTGTCTCTTTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGA-GATTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * *
775587 TTTGATTTTAAGGAAAATA-GG-GCAAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * * *
775620 TTT-TCACGACAAAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATAGTTCC
1 TTTCTTGCG--AAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * * ** ** * * * * * *
775684 TAAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGCTTGCCTCTTTTGAGGCATGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
775748 AGGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * *
775779 TTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACACTATGTTTATGGTACCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * * *
775844 ATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGATATAAACTTTG
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAGGTATAAACTTTG
*
775908 ATTCTATCAATAACGGTGGAAGAAAAGC
129 ATTCTATCAAAAACGGTGGAAGAAAAGC
* * * *
775936 TTCTCTTGCGACAACAAAGCATCAA-AGTCAGGTATCCTAATGA-AGGGAA-AGTGTTTTTGGTT
1 TT-TCTTGCGA-AACAAAGCATCAATA-TCATGTATCCTAATGAGA-AGAATA-TGTTTATGGTG
* * * *
775998 CCCAATCTTGAAAAGAATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAAA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAA
* * * * *
776061 CTTCGATT-TAAACGAAAATA-GG-GCAAAAAGAAGAT
124 CTTTGATTCT-ATC-AAAA-ACGGTGGAAGAA-AAG-C
* * * * * ** * **
776096 TTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATAATGCCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * **
776161 ATGAC--AAAATGAATGAAGATCT-TTATGAGAATCAATGTTTGTGTCATTTAAGGTAGGAAC-T
65 AT-CCTGAAAA-GAATGGAGAT-TATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* *
776222 T-AGTCTTTTCAAAAACTGGTTGGAAG-AAAGC
127 TGATTC-TATCAAAAAC-GG-TGGAAGAAAAGC
* ** *
776253 GTTTCTTGTGAAACCAAAGCATCAATA-CGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCC
1 -TTTCTTGCGAAA-CAAAGCATCAATATC-ATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* ** * * *
776317 TAATCCTGAAAAGAATGGGGATTAGCATGAGTATTC-ATGTTTGTCTTATTTAAGAG-ATAAAAT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * * * *
776380 TTGATTCAATGAATAACAGTGGAAAAGAAAGC
126 TTGATTCTATCAAAAACGGTGGAAGA-AAAGC
* ** * * * * * * *
776412 TTTTCTTGC-AACACCAAACCATCAACGTCATGTATCTTAATGA-AGGGAATGTATTTTTCGTTC
1 -TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGC
* * * * ** * *** *
776475 CTAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
62 CTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
** * *
776540 TGACTT-TAAGGAAAATA-GG-GTAAGGAAAAGA
127 TGA-TTCT-ATCAAAA-ACGGTGGAA-GAAAAGC
* * * * * * * * * *
776571 TTTCAATGCGAAAGAAAACCATCAATAACATTTACCCTAA-CAAAGAGAATGTGTTTATAGTGCC
1 TTTC-TTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGCC
** * * * * * ** ** * * **
776635 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGT-CGAACT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTT-AAGGTATAAACT
* * * *
776698 TAGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
126 TTGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * *
776729 GTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* ** * * * *
776794 AAT-CTGGAAATGAGCGGGGATTAGTATGAGTATTCAA-GTTTGTCT-TTTTAAGAG-ATAAACT
64 AATCCT-GAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* *
776855 TTGATTCTATCAATAACGGTGGAAGAAAAGG
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * * * *
776886 TTCTCTCGCTACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGTAGTGTGTTTTTGGTTCC
1 TT-TCTTGCGA-AACAAAGCATCAATATCATGTATCCTAATGAGAAG-AATATGTTTATGGTGCC
* * * * * * *
776950 CAAT-CTTAAAGAGAATGGAGACTT-TGATGACAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
63 TAATCCTGAAA-AGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* * *
777012 TTTGATTTTATGGAAAATA-GG-GAGAAGAAAAGA
125 TTTGATTCTAT-CAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * * * *
777045 TTT-TCACGATAAAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATAGTTCT
1 TTTCTTGCG--AAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * * * ** * * * * * *
777109 TAAT-CTCAAAACCAATGAAGATAATTGTTCA-AATCCTTGCTTGCCTCTTTTGAGGCATGAACT
63 TAATCCTGAAAA-GAATGGAGATTATT-ATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACT
* * * *
777172 TAGGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
126 T-TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * * *
777204 TTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAACACTATGTTTAGGGTACCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * ** *
777269 ATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTGTTTAAGATATAAACTTTG
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAGGTATAAACTTTG
* *
777333 ATTCTATCAATAGCGGTGGAAGAAAAGC
129 ATTCTATCAAAAACGGTGGAAGAAAAGC
* *
777361 TTCTCTTGCGACAACAAAGCATCAA-AGTCAGGTATCCTAATGA-AGGGAA-AGTGTTT-T--T-
1 TT-TCTTGCGA-AACAAAGCATCAATA-TCATGTATCCTAATGAGA-AGAATA-TGTTTATGGTG
* * * * *
777419 CCCAATCTTGAAAA-AATAGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAAA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAA
* * * * * *
777481 CTTCGATT-TAAACAAAAATAGG-GCAAAAAGAAGA
124 CTTTGATTCT-ATCAAAAA-CGGTGGAAGAA-AAGC
* * * * * ** * **
777515 TTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATAATGCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * ** * **
777580 AATGAC--AAAATTAATGAAGATCT-TTACCAGAATTAATGTTTGTGC-CATTTAAGGTAGGAAC
64 AAT-CCTGAAAA-GAATGGAGAT-TATTATGAGAATCAATGTTTGT-CTCATTTAAGGTATAAAC
* * *
777641 TTAG-TCCTTTCAAAAACTGGTGGGAAG-AAAGC
125 TTTGATTCTATCAAAAAC-GGT-GGAAGAAAAGC
* ** *
777673 GTTTCTTGTGAAACCAAAGCATCAATA-CGATGTATCCTTGTGAGAAGATTATGTTTATGGTGCC
1 -TTTCTTGCGAAA-CAAAGCATCAATATC-ATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* ** * * *
777737 TAATCCTGAAAAAAGAATGGGGATTAGCATGAGTATTC-ATGTTTGCCTTATTTAAGAG-ATAAA
63 TAATCCTG--AAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAA
* * * *
777800 ATTTGACTCTATCAATAACAGTGGAAAGAAAAGC
124 CTTTGATTCTATCAAAAACGGTGG-AAGAAAAGC
* * * * * * * *
777834 TTTTCTTGC-AACACCAAACCATCAATGTCATGTATCCTAATGA-AGGGAATGTATTTTTTGTTC
1 -TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGC
* * * * ** * *** *
777897 CTAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
62 CTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
** * *
777962 TGACTT-TAAGGAAAATATGGT--AAGGAAAAGA
127 TGA-TTCT-ATCAAAA-ACGGTGGAA-GAAAAGC
* * * * * * * * * *
777993 TTTCAATGCCAAAGAAAACCATCAATAACATTTACCCTAAT-AAAGAGAATGTGTTTATAGTGCC
1 TTTC-TTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGCC
** * * * * * ** ** * * * **
778057 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
778121 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * * *
778151 GTTTCTTGCAAAACCAAAGCAACAATATCAAGTATCCTTATGTGAAGACTATGTTTGTGGTACCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * * **
778216 AAT-CTGGCAATGAGTGGGGATTAGTATGAGCATTCAA-GTTTGTCTTTTTTAAGAG-ATAAACT
64 AATCCT-GAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * *
778278 TTGATTCTATCAATAATGGTGGAAGAAAAGGT
126 TTGATTCTATCAAAAACGGTGGAAGAAAA-GC
* * * ** * *
778310 TTTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAGGGATGTTTTTGGTTC
1 TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGA-ATATGTTTATGGTGC
* * * * * * *
778373 CCAATCTTGAAGAGATTGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * * *
778436 TTTGATTTTAAGGAAAATATGG-CGAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
* * * * * * * * * *
778469 TTTCCATGCCAAAGGAAACCATCAATAGCATTTATCCTAAAGAGAAGAATGTGTTTATAGTTCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * * ** ** * * * *
778534 AAT-CTCAAAATCAATGAAGATCATTGCT-CGAATCCTTGCATGTCTCTTTTGAGGCATGAACTT
64 AATCCTGAAAA-GAATGGAGATTATT-ATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
778597 AGGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * *
778628 TTTCTTGCGAAAACAAATCATCAATACCATGTATCCTTATGAGAAGACTATGTTTATGGTACCTA
1 TTTCTTGCG-AAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * * *
778693 ATCCT-AAAAGAATGTG-GATTAGTATAAGTATTC-ATGTTTATCTTATTTAAAAG-ATAAACTT
65 ATCCTGAAAAGAATG-GAGATTATTATGAG-AATCAATGTTTGTCTCATTT-AAGGTATAAACTT
**
778754 TGATTCTATCAGTAACGGTGGAAGAAAAGC
127 TGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
778784 TTCTCTCGCAGCACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATATGTTTTTGGTTCC
1 TT-TCTTGC-GAAACAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGCC
* * * * * * * *
778848 CACTCTTGAAGAGAATGGAGACTT-TTGTGAGAATCAAT-TCTTGTCTCATTTAGGGGTCT-AAG
63 TAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGT-TTGTCTCATTTA-AGGTATAAAC
* ** * ** * *
778910 TTTGATTTTAAGGAAAATATGG-CAAACAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
*** * * * * * * *
778943 TTTCCACACCAAAGGAAACCATCAATATCATTTATCCTAATGAGGATG-ATGTGTTTACGGTGCC
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGA-GAAGAATATGTTTATGGTGCC
* * * * * ** ** * * * *
779007 TAAT-CTTAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
779071 AGGCTT-T-TGAAAAATTGGTGGGAAG-AAAG-
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * * *
779100 TGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTAATGGTACC
1 T--TTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * *
779165 TAATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGAG-ATAAACT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* *
779228 TTGATTCTATCAATAATGGTGGAAGAAAAG-
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
779258 GTTCTCT-CGTAACACCAAAGCATCGATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 TTTCT-TGCG-AA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTG
* * * *
779321 CCCAAT-CTTAAAGAGAATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAA
61 CCTAATCCTGAAA-AGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAA
* * ** * ** *
779383 AGTTTGATTTTAAGGAAAATATGG-CAAAGAAAAGA
123 ACTTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
** * * * * * * * * *
779418 TTTCCACGCCAAAGGAAACCATTAATACCAT-TATCCTAATGAGGAGAATGTGTTTATAGTTCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * * ** * ** *
779482 AAT-CTCAAAACCAAT-GAGGATCATTGTTAGAATCCATGCATGTCTCTTTTGGGGTATGAACTT
64 AATCCTGAAAA-GAATGGA-GATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
779545 AGGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * * * *
779576 TTTCTAGTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAACATGTTTATGGTACCTA
1 TTTCTTGCG-AAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * * *
779641 ATCCTGAAGAGAATGGCGATTAGTATGAGCATTC-ATGTTTATCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* * * *
779704 GATTCTATTAATAACGGAGGACGAAAAGC
128 GATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
779733 TTCTCTCGC-AACACCAAAGCATTAGTGTCATGTATCCTAATGA-AGGGAATGTGGTTT-TGGTT
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATAT-GTTTATGGTG
* * * * * * *
779795 CCCAATCTTGAAGAGAATGGAGACTT-TTATAAGAATCAATGCTTGTCTCATTTATGGGTCT-AA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTA-AGGTATAAA
* * ** * *
779858 TTTTGATTTTAAGGAAAATA-GG-GCTAAGAAAAGA
124 CTTTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * **
779892 TTTCCACGCCAAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAAATTTGTTTATAATGCC
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAG-AATATGTTTATGGTGCC
* * ** * * ** ** * * * *
779957 TAAT-CTCAAAACCAATCCAGATCATTGTTCGAATCCTTGTTTATCT-ACTTTGAGGCATGAACT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCA-TTTAAGGTATAAACT
* * * *
780020 TAGGGTT-T-TCAAAAATTGGTGGGAA-AAAAGTG
126 T-TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * ** * ** *
780052 TTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTA
1 TTTCTTGCGAAAC-AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* ** * * *
780117 ATCCTGAAAAGAATGGGGATTAGCATGAGTATTC-ATATTTGTCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* *
780180 GATTCTATCAATAACAGTGGAAAGAAAAGC
128 GATTCTATCAAAAACGGTGG-AAGAAAAGC
* * * * * * ** *
780210 TTTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACGA-AAGGA-ATGTTTTTTCATTCC
1 -TTTCTTGCGA-AACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATG-TTTATGGTGCC
* * * * * * * ** * *** *
780273 TAATCTTCAAAAGATTGGAGACTGTTACGTGAATCAATACTTGTCTTATTTAAGGGCCAAACATT
63 TAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTTT
* ** * *
780338 GATTTTAAGGAAAATA-GG-GCAAAGAAAAGA
128 GATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
* * * * * * * * * *
780368 TTTCAATGCCAAAGAAAACCATCAATAACATTTATCCTAATAAAAAGAATGTGTTTGA-AGTGCC
1 TTTC-TTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTT-ATGGTGCC
** * * * * * ** ** * * * **
780432 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * * *
780496 AGACTT-TA-CAAAAATTGGAGGGAAG-GAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * *
780526 GTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTAA-GCGAAGACTATGTTTGTGGTGCC
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCC-TAATGAGAAGAATATGTTTATGGTGCC
* * * **
780590 TAAT-CTGGAAATGAGCA-GG-GATTAGTATGAGCATTCAA-GTTTGTCTTTTTTAAGAG-ATAA
63 TAATCCT-GAAA--AGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAA
* * *
780650 ACTTTGATTCTATCAATAACGATGGAAGAAAAGGT
123 ACTTTGATTCTATCAAAAACGGTGGAAGAAAA-GC
* * * * ** * *
780685 TTTCTCGC-AACACCAAAGCATCAATGTCATGTAACCTAATGA-AGGGAGGGATGTTTTTGGTTC
1 TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGA-ATATGTTTATGGTGC
* * * * * * *
780748 CCAATCTTGAAGAGATTGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
** *
780811 TTTGATT-T-T-AAGGAAACTATGGCGAAGAAAAGA
125 TTTGATTCTATCAA--AAACGGT-G-GAAGAAAAGC
** * * * * * * * * * *
780844 TTTCCACGCCAAAGGAAACCATCAATAGCATTTATCCTAAAGAGGAGAATGTGTTTATAGTTCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * ** ** * * * *
780909 AAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTA
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT-
* * * *
780973 GGCTT-T-TGAAAAATTGGTGGGAAG-AAAG-
127 TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * * *
781001 TGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACATGACTATGTTTATGGTACC
1 T--TTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * *
781066 TAATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTA-TTAAGAG-ATAAACT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * *
781128 TTGATTCTATCAATAATGGTGGAAGAGAAGC
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * *
781159 -TTCTCT-CGTAACACCAAAGCATCGATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 TTTCT-TGCG-AA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTG
* * * * * *
781221 CCCACTCTTGAAGAGAATGGAGACTT-TTGTGAGAATCAAT-TCTTGTCTCATTTAAGGGTCT-A
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGT-TTGTCTCATTTAA-GGTATAA
* * ** * ** * *
781283 AGTTTGATTTTAAGGAAAATATGG-CAAACAAAAGA
123 ACTTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
*** * * * * * *
781318 TTTCCACACCAAAGGAAA-CTATCAATATCATTTATCCTAATGAGGATG-ATGTGTTTACGGTGC
1 TTT-CTTGCGAAA-CAAAGC-ATCAATATCATGTATCCTAATGA-GAAGAATATGTTTATGGTGC
* * * * * * ** ** * * * *
781381 CTAAT-TTCAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACT
62 CTAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACT
* * * *
781445 TAGGCTT-T-TGAAAAATTGGTGGGAAG-AAAG-
126 T-TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * *
781475 TGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACC
1 T--TTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * *
781540 TAATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGAG-ATAAACT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* * * *
781603 TTGATTCTATCAATAATGGTGGAAGAGAAGG
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * *
781634 TTCTCTTG-TAACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTTC
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGC
* * * *
781697 CCAAT-CTTAAAGAGAATGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGT-CAAA
62 CTAATCCTGAAA-AGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAA
* * ** * ** *
781759 GTTTGATTTTAAGGAAAATATGG-CAAAGAAAAGA
124 CTTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
** * * * * * * * * *
781793 TTTCCACGCCAAAGGAAACCATCAATACCAT-TATCCTAATAAGGAGAATGTGTTTATAGTTCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * ** ** ** * * * *
781857 AAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGCATGTCTCTTTTGAGGCATGAACTTA
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT-
* * * * *
781921 GGCTT-T-TCAAAAATTGGTTTGAAG-AAAGTG
127 TGATTCTATCAAAAA-CGG-TGGAAGAAAAG-C
* * * * * * *
781951 TTTCTAGTGAAAAGAAAGCATCAATACCATGTATCCTTATGAGAAGAACATGTTTATGGTACCTA
1 TTTCTTGCG-AAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * * * *
782016 ATCTTGAAGAGAATGGCGATTAGTATGAGCATTC-ATGTTTATCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* * * *
782079 GGTTCTATCAATAACGGAGGACGAAAAGC
128 GATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * *
782108 TTCTCTCGC-AACACCAAAGCATCGATGTCATGTATCCTAATGA-AGGGAATGTGGTTT-TGGTT
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATAT-GTTTATGGTG
* * * * * * *
782170 CCCAATCTTGAAGAGAATGGAGACTT-TTATAAGAATCAATGCTTGTCTCATTTATGGGTCT-AA
61 CCTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTA-AGGTATAAA
* * ** * *
782233 GTTTGATTTTAAGGAAAATA-GG-GCTAAGAAAAGA
124 CTTTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * *
782267 TTTCCACGCCAAAGGAAACCATCAATATCATTTATCGTAATGAGGAGAATATGTTTATAGTGCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * ** * * ** ** * * * *
782332 AAT-CTCAAAACCAATCCAGATCATTGTTCGAATCCTTGTTTATC-CACTTTGAGGCATGAACTT
64 AATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCA-TTTAAGGTATAAACTT
* * * *
782395 AGGGTT-T-TCAAAAATTGGTGGGAA-AAAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * ** * ** *
782426 TTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAGACCACTATGTTTATTTTACCTA
1 TTTCTTGCGAAAC-AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* ** * * *
782491 ATCCTGAAAAGAATGGGGATTAGCATGAGTATTC-ATATTTGTCTTATTTAAGAG-ATAAACTTT
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTTT
* * *
782554 GATTCTATCAATAACAGTGGAAAGAAAAGAT
128 GATTCTATCAAAAACGGTGG-AAGAAAAG-C
* * * * * * * *
782585 TTTCTTGCGACACCAAAGCATCAATGTCATGTATCTTAACGA-AAGGA-ATGTTTTTTCGTTCCT
1 TTTCTTGCGA-AACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATG-TTTATGGTGCCT
* * * * * ** ** * *** *
782648 AATCTTCAAAAGATTAGAGACTATTGCGAGAATCAATACTTGTCTTATTTAAGGGCCAAACATTG
64 AATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTTTG
* ** * *
782713 ATTTTAAGGAAAATA-GG-GCAAAGAAAAGA
129 ATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
* * * * * * * * * *
782742 TTTCAATGCCATAGA-AAACCATCAATAACATTTATCCTAATAAAAAGAATGTGTTTGTAGTGCC
1 TTTC-TTGCGA-A-ACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
** * * * * * ** ** * * * **
782806 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
782870 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * ** * * *
782900 GTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTTTGCGAAGACTATGTTTGTGGTGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * *
782965 AAT-CTAGAAATGAGCA-GG-GATTAGTATGAGCATTCAA-GTTTGTCT-TTTTAAGAG-ATAAA
64 AATCCT-GAAA--AGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAA
* *
783024 CTTTGATTCTATCAATAACGGTGGAAGAAAAGG
124 CTTTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
783057 TTCTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGTAGTGTGTTTTTGGTTC
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGAAG-AATATGTTTATGGTGC
* * * * * * * *
783120 CCAATCTTGAAGAGAATGGAGACTT-TGATGACAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * *
783183 TTTGATTTTAAGGAAAATA-GG-GCAAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * * *
783216 TTT-TCACGACAAAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATAGTTCC
1 TTTCTTGCG--AAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * * ** ** * * * * ** *
783280 TAAT-CTCAAAACCAATGAAGATCATTGTTCGAATCCTTGCTTGCCTCTTTTGAGGCCTGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
783344 AGGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * *
783375 TTTCTTGAGAAACCAAAGCATCAATACCATGTATCCTAATGAGAACACTATGTTTATGGTACCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * *
783440 ATCCTGAAAAGAATAGG-GATTAGTATGAGTATTC-ATGTTTATCTTATTTAAGATATAAACTTT
65 ATCCTGAAAAGAAT-GGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAGGTATAAACTTT
*
783503 GATTCTATCAAAAACAGTGGAAGAAAAGC
128 GATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * *
783532 TTCTCTTGTGTCAACAAAGCATCAA-AGTCA-GTATCCTAATGA-AGGGAA-AGTGTTTTTGGTT
1 TT-TCTTGCG-AAACAAAGCATCAATA-TCATGTATCCTAATGAGA-AGAATA-TGTTTATGGTG
* * * * * *
783593 CCCAATCTTGAAAGGAATGGAGATT-TTATGAGAATCAATGATTGTCTCATTTAAGGGT-CAAGC
61 CCTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* * * * *
783656 TTCGATT-TAAACCCAAATA-GG-GCAA-AAAGATGA
125 TTTGATTCT--A-TCAAAAACGGTGGAAGAAA-A-GC
** * * * * * * **
783689 TTTCCAAGCCAAAGAAAACTATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAATGCCT
1 TTT-CTTGCGAAACAAAGC-ATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * ** **
783754 AATGAC--AAAATGAATGAAGATCT-TTACCAGAATCAATGTTTG-CGTCATTTAAGGTAGGAAC
64 AAT-CCTGAAAA-GAATGGAGAT-TATTATGAGAATCAATGTTTGTC-TCATTTAAGGTATAAAC
* * *
783815 -TT-AGTCTTTTCAAAAACTAGTGGGAAG-AAAGC
125 TTTGATTC-TATCAAAAAC-GGT-GGAAGAAAAGC
** * *
783847 GTTTCTT-CTGAAACCAAAGCATCAATA-CGATGTATCCTTGTGAGAAGATTATGTTTATGCTGC
1 -TTTCTTGC-GAAA-CAAAGCATCAATATC-ATGTATCCTAATGAGAAGAATATGTTTATGGTGC
* ** * * *
783910 CTAATCCTGAAAAGAATGGGGATTAGCATGAGTATTC-ATGTTTGTCTTATTTAAGAG-ATAAAA
62 CTAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAAC
* * * *
783973 TTTGACTCTATGAATAACAGTGGAAAGAAAAGC
125 TTTGATTCTATCAAAAACGGTGG-AAGAAAAGC
* * * * * * * * *
784006 TTTTCTTGC-AACACCAAACCATCAATGTCATGTATCTTAATGA-AGGGAATGTATTTTTCGTTC
1 -TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGC
* * * * ** * *** *
784069 CTAATCTTGAAAAGATTGGAGACTGTTATGAGAATCAATACTTGTCTTATTTAAGGGCCAAACAT
62 CTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* ** * *
784134 TCACTT-TAAGGAAAATA-GG-GTAAGAAAAAGA
127 TGA-TTCT-ATCAAAA-ACGGTGGAAG-AAAAGC
* * * * * * * * * *
784165 TTTCAATGCGAAAGAAAACCATCAATAACATTTACCCTAA-CAAAGAGAATGTGTTTATAGTGCC
1 TTTC-TTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGCC
** * * * * * ** ** * * **
784229 CGAT-CTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCATTTGAGGGACGAACTT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
784293 AGACTT-TA-CAAAAATTGGAGGGAAG-AAACC
127 TGA-TTCTATCAAAAA-CGG-TGGAAGAAAAGC
* * * * * * *
784323 GTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCGAAGACTATGTTTGTGGTGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * ** *
784388 AAT-CTGGAAATGAGTGGGGATTAGTATGAGCATTCAA-GTTTGTCTTTTTTAAGAG-AAAAACT
64 AATCCT-GAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
* *
784450 TTGATTCTATCAATAACGGTGGAAGAAAAGGT
126 TTGATTCTATCAAAAACGGTGGAAGAAAA-GC
* * * * * *
784482 TTTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAAGGATGTTTTTGGTTC
1 TTTCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAA-TATGTTTATGGTGC
* * * * * * *
784545 CCAATCTTGAAGAGATTGGAGACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGTCT-AAG
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * * *
784608 TTTGATTTTAAGGAAAATATGG-CGAAGAAAAGA
125 TTTGATTCT-ATCAAAA-ACGGTGGAAGAAAAGC
** * * * * * * * * ** *
784641 TTTCCACGCCAAAGGAAACCATCAATAGCATTTATCCTAAAGAGGAGAATGTGTTTAAAGTTCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * * ** ** * * * *
784706 AAT-CTCAAAACCAATGAAGATCATTGTTCA-AATCCTTGCATGTCTCTTTTGAGGCATGAACTT
64 AATCCTGAAAA-GAATGGAGATTATT-ATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT
* * * *
784769 AGGCTT-T-TCAAAAATTGGTGGGAAG-AAAGTG
127 -TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * * * * *
784800 TTTCTTGCAAAAACAAAGCATCAATACCACGTATCTTTATGAGAAGACTAGGTTTATGGTACCTA
1 TTTCTTGC-GAAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * *
784865 ATCCT-AAAAGAATGTG-GATTAGTATGAGTATTC-ATGTTTATCTTATTTAAAAG-ATAAACTT
65 ATCCTGAAAAGAATG-GAGATTATTATGAG-AATCAATGTTTGTCTCATTT-AAGGTATAAACTT
**
784926 TGATTCTATCAGTAACGGTGGAAGAAAAGC
127 TGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
784956 TTCTCTCGC-AACACCAAAGCAACAATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTTC
1 TT-TCTTGCGAA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGC
* * * * * * * * *
785019 CCACTCTTGAAGAGAACGGAGACTT-TTGTGAGAATAAAT-TCTTGTCCCATTTAAGGGTCT-AA
62 CTAATCCTGAAAAGAATGGAGA-TTATTATGAGAATCAATGT-TTGTCTCATTTAA-GGTATAAA
* * ** * * *
785081 GTTTGATTTTAAGGAAAATA-GG-GCAAACAAAAGA
124 CTTTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * * *
785115 TTTCCACGCCAAAGGAAACCATCAATATCATTTATCCTAATGAGGATG-ATGTGTTTACGGTGCC
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGA-GAAGAATATGTTTATGGTGCC
* * * * * ** * * * * *
785179 TAAT-CTCAAAACAAATGAAGATCATTGTTCGAATTC-TTGTTTGTCACTTTTGAGGCATAAACT
63 TAATCCTGAAAA-GAATGGAGATTATTATGAGAA-TCAATGTTTGTCTCATTTAAGGTATAAACT
* * * *
785242 TAGGCTT-T-TGAAAAATTGGTGGGAAG-AAAG-
126 T-TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * *
785272 TGATTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGACAAGACTATGTTTATGGTACC
1 T--TTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * * *
785337 TAATCCTGAAAAGAATGGGGATTAGTATGAGTATTC-ATCTTTATCTTATTTAAGAG-ATAAACT
63 TAATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACT
*
785400 TTGATTCTCTCAATAAA-GGTGGAAGAAAAG-
126 TTGATTCTATCAA-AAACGGTGGAAGAAAAGC
* * * *
785430 GTTCTCT-CGTAACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTGTT-TGGT
1 TTTCT-TGCG-AA-A-CAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGT-TTATGGT
* * * * * * *
785492 TCCCAAT-CTTAAAGATAATGGAAACTT-TTATGAGAATCAATGCTTGTCTCATTTAAGGGTCT-
60 GCCTAATCCTGAAA-AGAATGGAGA-TTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATA
* * ** * * *
785554 AAGTTTGATTTTAAGGAAAATA-GG-GCAATTAAAAGA
122 AACTTTGATTCT-ATCAAAA-ACGGTGGAA-GAAAAGC
** ** * * *
785590 TTTCCACGCCGAAGGAAA-CTATCAATATCATTTATCCTAATGAGGAGAATGA-GTTTATAGTGC
1 TTT-CTTG-CGAAACAAAGC-ATCAATATCATGTATCCTAATGAGAAGAAT-ATGTTTATGGTGC
* * * * * ** ** * ** *
785653 CTAAT-CTCAAAACCAATGAAGATCATTGTTCGAATCTTTGTTTGTCTCTTTTGGGGCT-TGAAC
62 CTAATCCTGAAAA-GAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGG-TATAAAC
* * * * *
785716 TTAGGCTT-T-TTAAAAATTGGTGGGAAG-AAAGTG
125 TT-TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * * *
785749 TTTCTTGCGAAACCAAAGTATGAATACCATGTATCCTTATGAGAAGACTATATTTATGGTGCCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
** * * * * ** * *
785814 ATATTGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTGTCTTATTTAAGACACAAACTTCG
65 ATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAGGTATAAACTTTG
* ** *
785878 ATTCTATCAATAATTGTGGAAAAAAAAGC
129 ATTCTATCAAAAACGGTGG-AAGAAAAGC
* * * * * * * * * * *
785907 -TTCAGTTGAGGCACCAATGAATCAATGTCATGTATCCTAATGA-AGGGAATGTATTTTTGGTTC
1 TTTC--TTG-CGAAACAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGG-TG
* * * * ** * * ** *
785970 CCT-ATCCTGAAAAGATTAGACACTATTACAAGAATGAATGCTTGTCTTTTTTAAGGGT-CAAAC
61 CCTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* ** * * *
786033 TTTGATTTTAAGGAAATTA-GG-GCAAAGAAAAGA
125 TTTGATTCT-ATCAAA-AACGGTG-GAAGAAAAGC
* * * * * * * * * *
786066 TTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATTAGGAGAATGTGTTTATAGTGCCT
1 TTT-CTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* ** * * ** ** * * * **
786131 AATCTTGAAACCAA-GGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGGACTTA
64 AATCCTGAAAAGAATGG-AGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT-
* * * ** *
786195 GGCTT-T-TCAAAAATTGGTGGGAAG-ATGGTG
127 TGATTCTATCAAAAA-CGGT-GGAAGAAAAG-C
* * * * * * * *
786225 TTTCTTGCTAAAGCAAAGCATTAATACCATGTATCCTTATGCGAACACTATGTTTGTGGTGCCTA
1 TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTA
* * * * ** * * * *
786290 ATCC-CAAAATGAGTGGGGATTAGTGCGCGTATTC-ATGTTTGTCT-TTCTTAAGAG-ACAAACT
65 ATCCTGAAAA-GAATGGAGATTATTATGAG-AATCAATGTTTGTCTCAT-TTAAG-GTATAAACT
* *
786351 TTGATTCTATCAATAACGGTGGAGGAAAAGC
126 TTGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
786382 TTTTCTTGTGACACCAAAGCATTAATTTCATGTATCATAATGA-AGGGAACGTAT-TTT-TGGTT
1 -TTTCTTGCGA-AACAAAGCATCAATATCATGTATCCTAATGAGA-AGAA--TATGTTTATGGTG
* * * * * * * * *
786444 CCCAATCTTGAAAAGATTGGAGATTGTTACGAGAATCAAAGCTTCTCTCATTTAATGGT-CAAAC
61 CCTAATCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAAC
* * *
786508 TTTGATTTTAAAT-AAAATA-GG-GCAAAGAAAAGG
125 TTTGATTCT--ATCAAAA-ACGGTG-GAAGAAAAGC
* * * * * * * *
786541 TTTACATGCCAAAGAAAACAATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT
1 TTT-CTTGCGAAACAAAGC-ATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
** * * * ** ** * * * * * *
786606 AAT-CTCGAAACCAATGAAGATGATTGTTCGAATCCTTATTTATCTCTTTTGAGGCATGAACTTA
64 AATCCT-GAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTT-
* * *
786670 GGCTT-T-TCAAAAATTGGTGGGAAG-AAAGC
127 TGATTCTATCAAAAA-CGGT-GGAAGAAAAGC
* ** * *
786699 GTTCCTTGC-AAACCAAAGCATCAATATCATGTATCCTTGTGAGAAGACTATGTTTGTGGTGCCT
1 -TTTCTTGCGAAA-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCT
* * * * * *
786763 AATCCTGAAATGAATGGGGATTAGTATGAGTATTC-ATGTTTGTCTTATTTTAGAG-ATAAA-TT
64 AATCCTGAAAAGAATGGAGATTATTATGAG-AATCAATGTTTGTCTCATTTAAG-GTATAAACTT
*
786825 GTGATTCTATCAATAACGGTGGAAGAAAAGC
127 -TGATTCTATCAAAAACGGTGGAAGAAAAGC
* * * * * * *
786856 TTCTCTTGCGACACCAAAGCATCAATGTCATTTATCCTAATGA-AGGGAATGTGTTTTTGGTTCC
1 TT-TCTTGCGA-AACAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATGGTGCC
* * * * * *
786920 TAATCTTGAAAAGAATGGAG-TCTTTTAGGAGAATCAGTGCTTGTCTCATTTAAGGGT-CAAACT
63 TAATCCTGAAAAGAATGGAGAT-TATTATGAGAATCAATGTTTGTCTCATTTAA-GGTATAAACT
* ** * *
786983 TTGATTTTAAGGAAAATA-GG-GCAAAGAAAAGT
126 TTGATTCT-ATCAAAA-ACGGTG-GAAGAAAAGC
** * * * * * *
787015 TTTCCAAGCAAAAACAAAAAACCATCAATTTCATTTATCCTAATGAGGAGAATATGTTTATAGTG
1 TTT-CTTGC-GAAAC---AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTG
** * ** * * * **
787080 CCTAA--AAGCAAAATGAATGAAGATCCTTACT-AGAATCCATGTTTATCTCATTTGAA-GCACG
61 CCTAATCCTG-AAAA-GAATGGAGATTATTA-TGAGAATCAATGTTTGTCTCATTT-AAGGTATA
* * ***
787141 AACTTAAGACTT-T-TTAAAAATTTATGGGAAG-AAAGC
122 AACTT-TGA-TTCTATCAAAAA-CGGT-GGAAGAAAAGC
* * * * * *
787177 ATTTCTTGCAAAATCAAGGCATCAATATCGA-GTATCCTTATGAGCAGACTATGTTTATGGTGTC
1 -TTTCTTGCGAAA-CAAAGCATCAATATC-ATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
* * * * * *
787241 TAATCCTTAAAAAGAATAGG-GATTAGTATGAGTATTC-ATGTTTATC-CTTTTTAAGAG-ACAA
63 TAATCC-TGAAAAGAAT-GGAGATTATTATGAG-AATCAATGTTTGTCTC-ATTTAAG-GTATAA
*
787302 ACTTTGATTCTATCAATAACGGTGGAAGAAAAGC
123 ACTTTGATTCTATCAAAAACGGTGGAAGAAAAGC
787336 TTCTCTTGCGA
1 TT-TCTTGCGA
787347 CACCATGAAG
Statistics
Matches: 17374, Mismatches: 5595, Indels: 3459
0.66 0.21 0.13
Matches are distributed among these distances:
152 12 0.00
153 152 0.01
154 168 0.01
155 38 0.00
156 389 0.02
157 2052 0.12
158 7657 0.44
159 5716 0.33
160 912 0.05
161 175 0.01
162 88 0.01
163 12 0.00
164 3 0.00
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (156 bp):
TTTCTTGCGAAACAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCCTAA
TCCTGAAAAGAATGGAGATTATTATGAGAATCAATGTTTGTCTCATTTAAGGTATAAACTTTGAT
TCTATCAAAAACGGTGGAAGAAAAGC
Found at i:788320 original size:475 final size:475
Alignment explanation
Indices: 787361--798582 Score: 13424
Period size: 475 Copynumber: 23.6 Consensus size: 475
787351 ATGAAGGCAT
* *
787361 CAATGAAGATGATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTTAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * * * * *
787426 ATTGGTGGGAAGAAAGCGTTCCTTGCATAACCAAAGCATCAATATCGTGTATCCTTGTGAAAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * * **
787491 CTATGTTTGTGGTGCCTAATCCAGAAAAAAAATAGGGCGTAGTATGAGTATTCATGTTTGTCTTA
131 CTATGTTTATGGTGCCTAATCCTG-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * ** ** *
787556 TTT----GATAAACTTAGATTCTATCAATAATAGTAAAAAGAAAAAGCTTCTCTAT-CGACACTA
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGT-GGAAG-AAAAGCTTCTCT-TGCGACACCA
** * * * *
787616 AATAATCAATGTCATGTATCCTAAAGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGTTTA
257 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTG
* * * * *
787681 GAGACTATTACGAGAATCAATGCTTATCTTATTTAAGGGACAAATTTTGATTTTAAGGAAAATAG
322 GAGACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
* * * * * * *
787746 GGCAAAGAAAAGATTTCCTTGCCAAAAAAAATCGTCAATAACATTTATCCTAACGAGGAAAATGT
387 GGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGT
*
787811 CTTTATAGTGCCTAATCTCAAAAC
452 GTTTATAGTGCCTAATCTCAAAAC
* *
787835 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGTGGCAAGAACTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * * * *
787900 ATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGTATTAATACCATGTACCCTAATAAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * *
787965 CTATGTTTATGGTGCCTAATCCTGAAAAAGAATAGGGATTAGTACGAGTATTCATGTTTGCCTTA
131 CTATGTTTATGGTGCCTAATCCTG-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
788030 TTTAAGAGACAAACTTTGATTCTATCCATAACGGTGGAAGAAAAGCTTCTCCTGTGACACCAAAG
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
* * *
788095 CATCATTGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCT-CCTATCTTGAAAAGATTGGAG
260 CATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAG
* * * * *
788159 ACTATTGCGAGAATCATTGCTTGTCTTATTTAAGGGTCAAACTTTGAATTTAAGGAAAATAGGGC
325 ACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGC
* *
788224 AAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGAAGAATGTGTT
390 AAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTT
* *
788289 TATAGTGCCTAATCTCGAAGC
455 TATAGTGCCTAATCTCAAAAC
* * * *
788310 CAAGGAAGATCATTGTTCTAATCATTGTTTGTCTCTTTTGAGGCATGAACTTAGGCGTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * * * *
788375 ATTTGTGGGAAGAAGGTGTTTCTTGCTAAAGCAAAGCATCAATACCATGTATCCTTATGCGAAGG
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * * * * *
788440 CTATGTTTCTGGTGACTAATCC-CAAAATGAATAGGGATTACTATGCGTATTCATGTTTGTCTTT
131 CTATGTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
788504 TTTAAGAGACAAAATTTGATTCTATCAATAACGGTGGAGGAAAAGCCTCTCTTGCGACACCAAAG
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
* * * * *
788569 CATTAATTTCATGTATCATAACGAAAGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAG
260 CATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAG
* * * * * *
788634 ACTGTTAGGAGAATCAAAGCTTCTCTTATTTAAGGGTCAAACTTTGATTTTAAAGAAAATAGGGC
325 ACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGC
* * * *
788699 AAAGAATATATTTCCAGGCCAAAGAAAACCATTAATATCATTTATCCTAATGAGGAGAATGTGTT
390 AAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTT
*
788764 TATAGTGCCTAATCTCGAAAC
455 TATAGTGCCTAATCTCAAAAC
* * *
788785 CAATGAAGATGATTGTTCGAATCCTTGTTTGTCTTTTTTGAGGCTTGAACTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * * * * *
788850 ATTAGTGGGAAGAAAGCG-TTCATTGCAAAACCAAAGCATCAATATCGTGTAACCTTGTGAGAAA
66 ATTGGTGGGAAGAAAGTGTTTC-TTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
* *
788914 ACTATGTTTGTGGTGCCTAATCCTGAAATA-AATGGAGATTAGTATGAGTATTCATGTTTGTCTT
130 ACTATGTTTATGGTGCCTAATCCTGAAA-AGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * * *
788978 ATTTAAGAGATAAACTGTGATTCTATCAATAATGGTGGAAGAAAAGCTCCTCTTGCGACACCAAA
194 ATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAA
** *
789043 GCATCAATGTCATGTATCCTAATGAAGGGAATGTGCTTTTGGTTCCCAATCTTGAAAAGAATGGA
259 GCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGA
* * *
789108 GACTTTTACAAGAATCAATGCTTGTCTCATTTAGGGGTCAAACTTTGATTTT-AGAGAGAATAGG
324 GACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAG-GAAAATAGG
* * * * * * *
789172 GTAAAGAAAAGTTTTCCAAGCCAAAAAAAACCAACAATTTCATTGATCCTAATGAGGAGAATGTG
388 GCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTG
* *
789237 TTTATAGTGCCTAATCACAAAAT
453 TTTATAGTGCCTAATCTCAAAAC
* * ** * * * * * * *
789260 GAATGAAGATCCTTACTAGAATCCATATTTATCTCATTTGAGGCACGAACTTAGACTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * *
789325 ATTTGG-GGGAAGAAAGTGTTTCTTGCAAAATCAAGGCATCAATATCGA-GTATCCTTATGAGAA
66 A-TTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATA-CCATGTATCCTTATGAGAA
* * * *
789388 GACTATGTATATGGTGCCTAATCCTTCAAAAAGAATAGGGATTAGTAGGAGTATTCATGTTTGTC
129 GACTATGTTTATGGTGCCTAATCC-T-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT-
* * * *
789453 CTT-TTTAAGAGATAAACTTTGATTCTATTAATAACGATGGAAGAAAAGCTTCTTTTGC-A-A-C
191 CTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACC
* * * * * *
789514 ---TC-T-AATGCCATATATCCTATTGAAGGGAATGTACTTTTGGTTCCCAATCTTAAAAAGATT
256 AAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATT
* ** * * * *
789574 GGAGAATGATATGAGAATCATTGTTTGTCTCATTTAAGGGTCAAACTTTTATTTTAAGGAAAATA
321 GGAGACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATA
* * * *
789639 GGGCAAATAAAAGATTTCCTTGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGAAGAATG
386 GGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATG
* *
789704 TGTTTTTAGTGCCCAATCTCAAAAC
451 TGTTTATAGTGCCTAATCTCAAAAC
* * * * * * *
789729 AAATAAAAATCATTGTTCGAATCCTTATTTGTCACTTTTGAGGCATGAACTTAGACTTTACAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * * * * * *
789794 ATTGGAGGGAAGAAACTGTTTCTTGAAAAACCAAGGCATCAATATCGTGTATCCTTATGCGAAGT
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * * * ** * *
789859 TTATGTTTGTGGTGCCTAATCTTGGAATGGGTGGGGATTAGTATGTGTATTCATGTTTGTCTTTT
131 CTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* *
789924 TTAGGAGACAAACTTTGATTCTATCAATAACGGTGGTAGAAAAGCTTCTCTTGCGACACCAAAGC
196 TTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGC
* * * * * ** * * * *
789989 GTCAATGTTACGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCTAATGATGAACACAATAGAGA
261 ATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGA
** * * * *
790054 CTTTTATAAGAATCAAGGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGAAAAATTGGGCA
326 CTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGCA
* *
790119 AAGAAAAGATTTCCATGCCAAAGGAAACCATCAATATCATTTATCCTAATAAGGAGAATGTGTTT
391 AAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTT
*
790184 ATAGTGCCTAATCTCGAAAC
456 ATAGTGCCTAATCTCAAAAC
* * * * * *
790204 CAAGGAAGAGCAATGTTTGAATCATTGTTTGTCTCTTTTGAGGTATGAACTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * * *
790269 ATTGTTGGGAAAAAAAGTGTTTCTTGCGAAACCATAGCATCAATACCATGTATCCTTATGCGAAG
66 ATTGGTGGG-AAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
* * * * * * *
790334 ACAATGTTTGTGGTTCCTAATCCT-AAAATGAGTGGGGATTAGTATGCGTATTTATGTTTTTCTT
130 ACTATGTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * *
790398 -TTTCAATAGACAAACTTTGATTCTATCAATAACGGTGG-AGCAGAAGCCTCTCTTGCGACACCA
194 ATTT-AAGAGACAAACTTTGATTCTATCAATAACGGTGGAAG-AAAAGCTTCTCTTGCGACACCA
* * * *
790461 AAGCATTAATTTCATGTATCATAATGAAAGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTG
257 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTG
* * * * * * *
790526 GAGACTGTTAGGAGAATCAAAGCTTCTCTTATTTAAGGCTCAAACTTTGATTTTAAAGAAAATAG
322 GAGACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
* * * *
790591 GGCAAAGAATATATTTCCATGGCAAAGAAAACCATTAATATCATTTATCCTAATGAGGAGAATGT
387 GGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGT
790656 GTTTATAGTGCCTAATCTCAAAAC
452 GTTTATAGTGCCTAATCTCAAAAC
* * *
790680 CAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGTGGCAAGAACTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
*
790745 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTAATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* *
790810 CTATGTTTATGGTGCCTAATCCTAAAAAAGAATGGGGATTAGTATGAATATTCATGTTTGTCTTA
131 CTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
790875 TTTAAGAGACAAACTTTGATTCTATCCATAACGGTGGAAGAAAAGCTTCTCTTGTGACACTAAAG
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
* * * ** * * * * *
790940 CATCAACGTCTTATATCCTAATGAAGGGAATGTGGTTTTGATTCCTAATCATGATAAGAATGGAG
260 CATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAG
* * * * *
791005 TCTTTTACAAGAATCAATGCATGTCTCATTTGAA-GGTTAAACTTTGATTTT-AGGAAAAATAAG
325 ACTTTTACGAGAATCAATGCTTGTCTCATTT-AAGGGTCAAACTTTGATTTTAAGG-AAAATAGG
* * *
791068 GCAAAAAAAAGATTTCCACGCCAAAGAAAACCATCAATATCATTAATCCTAATGAGGAGAATGTG
388 GCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTG
* *
791133 TTTATAGTGTCC-AATCACAAAAT
453 TTTATAGTG-CCTAATCTCAAAAC
* * * ** * * ** * *
791156 GAATGAAAATCCTTACTAGAAT-CATGTTTGTCTCACTTAAGGCATGAGCTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
** ** * *
791220 ATTGGAAGGAAGAAAACGTTTCTTGCAAAACCAAAGTACCAATACCATGTATCCTTATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* *
791285 CTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGAGTATTCATGTTTGTCTTAT
131 CTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
** * *
791350 TTAAGAGACAAACTTTGATTCTATCAATAACAATGGTAACG-AAAGCCTCTCTTACGACACCAAA
196 TTAAGAGACAAACTTTGATTCTATCAATAACGGTGG-AA-GAAAAGCTTCTCTTGCGACACCAAA
* * * * **
791414 GCATCAATGTCAAGTATCCTAATGAAGGGAATATATTTTTGGTACCCAATATTGAAAAGATTATA
259 GCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGA
* * * *
791479 GACTATTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAACAAGG
324 GACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGG
* * *
791544 TAAAGAAAATATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTGT
389 CAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGT
* *
791609 TTAAAATGCCTAATCTCAAAAC
454 TTATAGTGCCTAATCTCAAAAC
* * *
791631 CAATGAAGATTATTGTTCGAATTCTTGTTTGTCT-TTTTTAGGGCATGAACTTAGGCTTTTCAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGA-GGCATGAACTTAGGCTTTTCAAA
* * * *
791695 AATTGGTGAGAAGAAAGTGTTTCTTGCGAAACCAAAGCATTAATACCATGTATCCTTATGCGAAG
65 AATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
** * * * * *
791760 ACTATGTTTGGGGTGCCTAATCCTGAAATGAGTGGGGATTAGTATGTGTATTCATGTTTGCCTTT
130 ACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * *
791825 TTTAAGAGACAAACTTTGATTTTATCAATAACGGTGGAAGAAAAGCTTTTCTTGTGACACAAAAT
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
* * * * * *
791890 CATCAATGTCATCTATCCTAATGAAAGGAATGTGTTGTTGGTTCCTAATCTTGAAAAGCTTGGAG
260 CATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAG
* ** * *
791955 ACTATTACGAGAATCAATGCTTGTCTTTTTTAAGGGTCAAACTTTAATTTTAAGGAAAATAAGGC
325 ACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGC
* * * * *
792020 AAAGAAAAGATATCCATGCCAGAGAAAACCATTAATAACATTTA-CCTTAAAGAGGAGAATGTGT
390 AAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCC-TAATGAGGAGAATGTGT
*
792084 TTATAGTGACTAATCTCAAAAC
454 TTATAGTGCCTAATCTCAAAAC
* * * *
792106 TAATGAAGTTCATTGTTCGAATCCTTGTTTGTCTTTTTTGAGGCGTGAACTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * *
792171 TTTGGTAGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * *
792236 CTATGTTTGTGGTGCCTAATCCT-AAAATGAGTGGGGATTAGTATGTGTATTCATGTTTGTCTTT
131 CTATGTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
*
792300 TTTAAGAGACAAACTTTGATTCCATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
* * * *
792365 CATCAATGTCAGGTATCCTAATGAAGGAAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAG
260 CATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAG
* *
792430 ACTTTTACGAGAATCAATACTT-TCTCATTTATGGGTCAAACTTTGATTTTAAGGAAAATAGGGC
325 ACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGC
* * * * * * *
792494 AAAGAAAAGTTTTCCAAGCCAAAGAAAACCATCAATAACATCTATCCTAATAAGAAGAATTTGTT
390 AAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTT
792559 TATAGTGCCTAATCTCAAAAC
455 TATAGTGCCTAATCTCAAAAC
* * *
792580 TAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAGGCATGACCTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * * *
792645 ATTGGTGGGAAAAAAGTGTTTCTTTCGAAACCAAAGCATCAATACCGTGTATCCTTATGTGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * * * *
792710 CTATGTTTGTGGTGCCTAATCCTGAAATGAGTGGGGATTAGTATGTGTATTAATGTTTGTCTTTT
131 CTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
*
792775 TTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACCCCAAAGC
196 TTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGC
* * * * *
792840 ATCAATGTCAAGTACCCTAATGAATGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATAGG-G
261 ATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAG-ATTGGAG
* * * * * * *
792904 ACTTTTATGAGAATCAAGGCTTGCCTTATTTAAGGGCCAAACTTTGAGTTTAAGGAAAGTAGGGC
325 ACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGC
* * * * * * *
792969 AAATAAAATATTTCCACGGCAAAGGAAACCATAAATATCATTTATCCTAATAAGGAGAATGTGTT
390 AAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTT
793034 TATAGTGCCTAATCTCAAAAC
455 TATAGTGCCTAATCTCAAAAC
*
793055 CAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
*
793120 ATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * *
793185 CTATGTTTATGGTGCCAAATCCTGAAAGGAATGAGG-TGTAGTATGAGTATTCATGTTTGTCTTA
131 CTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT-TAGTATGAGTATTCATGTTTGTCTTA
* * * *
793249 TTTTAGAGACAAACTTTGATTCCATCAATAACAGTGGAAAGAAAAAGCTTCTCCTT-CGACACAA
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGG-AAG-AAAAGCTTCT-CTTGCGACACCA
* ** * * *
793313 AAGGATCACCGTCATGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGTTTG
257 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTG
* * * * *
793378 GAGACTGTTACAAGAATCAATGCATATCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
322 GAGACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
* * * *
793443 GGCAAA-ACAAAGATTTCCATGCCAAAGAAAACCATCAATAACGTTTA-CCTTAAAGAAGAGAAT
387 GGCAAAGA-AAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCC-TAATGAGGAGAAT
* * *
793506 GTATTTATAGTGCATAATCCCAAAAC
450 GTGTTTATAGTGCCTAATCTCAAAAC
* * * ** * *
793532 GAATAAAGGTCATTGTTCGAATCCTTGTTTGTGACTTTTGAGGCATGAACTTAGACTTTACAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
** * * *
793597 ATTGGTGGGAAGAAACCGTTCCTTGCAAAACCAAAGCATCAATATCATGTATCCTCATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * * *
793662 CTATGTTTGTGGTGCCTAATCATGAAATA-AATAGGGATTAGTATGAGTATTCATGTTTATCTTT
131 CTATGTTTATGGTGCCTAATCCTGAAA-AGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* *
793726 TTTATA-AGACAAACTTTGATTCTATCAAGAACGGTGGAAGAAAAGCTTCTCTTGCTACACCAAA
195 TTTA-AGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAA
* * * *
793790 GCATCAATGTCTTGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGG
259 GCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGA
* * * * * *
793855 GACTTTTAGGAGAATCAACGCTTGTCTAATTTAAGAGTAAAACTTTGATTTTAAGAAAAAT-GTG
324 GACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG-G
* * * * * *
793919 GCAAAAAAAAGTTTTCCAAGCCAAAGAAAACCATCAATTTCATTTATCCTAACGAGGATAATGTG
388 GCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTG
* *
793984 TTTATAGTGCCTAATCACAAAAT
453 TTTATAGTGCCTAATCTCAAAAC
* * * * * *** * **
794007 GAATGAAGATCCTTGCTAGAACCCACATTTGTCTCATTTGAGGCATGAACTTATACTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* ** * * ** *
794072 ATTTGTGGGAAGAAACCGTTTCTTGCGAAATCAGGGCATCAATATCGA-GTATCCTTATGAGAAG
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATA-CCATGTATCCTTATGAGAAG
* *
794136 ACTATGTTTATGGTGCCTAATCCTGAAAAGAATAGGGATTAGTATGAGTGTTCATGTTTGTCTTA
130 ACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
794201 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
* * *
794266 CTTCAATGTCATG-AGTCCTATTGAAAGGAATGTATTTTTGGTTCCCAATCTT-AAAAGGATTGG
260 CATCAATGTCATGTA-TCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAA-GATTGG
* * *
794329 AGACTGTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAGCTTT-ATGTTTAAGGAAAATAG
323 AGACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGAT-TTTAAGGAAAATAG
* * * * **
794393 GGCAACA-AAAAGATTTCGATGCCAAAAAAAACCGTCAATAAT-ATTTACCCTAATGAGGAGTGT
387 GGCAA-AGAAAAGATTTCCATGCCAAAGAAAACCATCAAT-ATCATTTATCCTAATGAGGAGAAT
*
794456 GTGCTTATAGTGCCTAATCTCAAAAC
450 GTGTTTATAGTGCCTAATCTCAAAAC
* * * * * * *
794482 CAGTGAAGGTCATTGTTCAAATCCCTGTTTGTCTCTTTTGTGGCATGAACATAGGGTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * * ** * *
794547 ACTGGGGGGAAAAAAGCGTTTCTTGTGAAACCAAAGCATCAATACCATGTTTTCTTATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * *
794612 CTATGTTTATGGTGCCTAATCCT-ATAAAGAATAGGGATTAGTGTGAGTATTCGTGTTTGTCTTA
131 CTATGTTTATGGTGCCTAATCCTGA-AAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
794676 TTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTATCTTGCGACACCAAAG
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
* ** * * *
794741 CATCAATGTCATGTATCCT-ATGGAAGGGAATGTGTTTTTGGTTCCCTTTCCTGATAAGAATGGA
260 CATCAATGTCATGTATCCTAAT-GAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGA
* * * *
794805 GACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGG
324 GACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGG
** * * * * *
794870 CAAAGAAAAGATTTCCACACCAAATAAAACCGTAAATATTATTAATCCTAATGAGGAGAATGTGT
389 CAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGT
* * *
794935 TTAAAGTGTCC-AATCACAAAAT
454 TTATAGTG-CCTAATCTCAAAAC
* * * * * * *
794957 AAATGAAGATCATTGCTAGAAT-CATGTTTGTCACATTTAAGGCATGAACTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * * *
795021 ATTGGTGGGAAGAAAGCGCTTCTTGCAAAACCAATGTATCAAATACCATGTATCCATATGAGAAG
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATC-AATACCATGTATCCTTATGAGAAG
* * *
795086 ACTATGTGTATGGTGCCTAAT-CTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTCTGTCTT
130 ACTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * * * * * *
795150 ATTTAAGACACAAACTTTGATTCTATCAATACCAGTGGTAAGAGAAGCTTCTATTGCGGCACCGA
194 ATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTTGCGACACCAA
* * * * * *
795215 AGCATCAATGCCATGTATCCTAATGAAGGGAATGCATTTTTGGCTCTCAATATTGAAAAGTTTGG
258 AGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGG
* * *
795280 AGACTATTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAACGAAAATAGG
323 AGACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGG
* * * * * *
795345 GCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATAACATATATCCTAATGTGAAGTATGTG
388 GCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTG
*
795410 TTTATAGTGCCTAATTTCAAAAC
453 TTTATAGTGCCTAATCTCAAAAC
* * * * * *
795433 CAGTGAAGGTCATTGTTCAAATCCCTGTTTGTCTCTTTTGTGGCATGAACTTAGGGTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * ** *
795498 ACTGGTCGGAAGAAAGTGTTTCTTGTGAAACCAAAGCATCAATACCATGTTTCCTTATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * * *
795563 CTATGTTTGTGGTGCCTAATCCTGTAAAGAATAGGGATTAGTGTGAGCATTCATGTTTGTCTTAT
131 CTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * *
795628 TTAAGAGATAAACATTGATTCTATCAATAACAGTTGG-AGAAAAGCTTCTCTTGCGACACCAAAG
196 TTAAGAGACAAACTTTGATTCTATCAATAAC-GGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
* * * * * *
795692 CATCAATGTCATGTATCCTAAGGAGGGGAATGTGTTTTTGGTTCCCATTCCT-AATAAGAATGGA
260 CATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAA-AAGATTGGA
* * * * *
795756 GACTTTTACAAGTATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGG
324 GACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGG
** * * *
795821 CAAA-AAAAGGATTTCCACACCAGAGAAAACCATCAATATCATTAATCCTAAGGAGGAGAATGTG
389 CAAAGAAAA-GATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTG
* * *
795885 TTTAAACTGTCC-AAT-TGCAAAAT
453 TTTATAGTG-CCTAATCT-CAAAAC
* * ** * * * * *
795908 AAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTAAGGCAAGAACTTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * * *
795973 ATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATAGCATGTATCCATATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* *
796038 CTATGTTTATGGTGCCTAAT-CTCGAAAAGAATGGAGATTAGTTTGAGTATTCATGTTTGTCTTA
131 CTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * *
796102 TTTAAGAGGCAAACTTTGATTCTATCAATACCAGTGGTAA-AAGAAGCTTCTCTTGCGGCACCAA
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGG-AAGAA-AAGCTTCTCTTGCGACACCAA
* * * * ** *
796166 AGCATCAATCTCATGTATCCAAATGAAGGGAATGTATTTTTGGCTCTCAAAATTGAAAAGATTGA
258 AGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGG
* * *
796231 AGACTATTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAACGAAAATAGG
323 AGACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGG
* * *
796296 GCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATCTATCCTAATGA-GAAATATGT
388 GCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGA-ATGT
796360 GTTTATAGTGCCTAATCTCAAAAC
452 GTTTATAGTGCCTAATCTCAAAAC
* * * * * * *
796384 CAGTGAAGGTCATTGTTCAAATCCCTGTTTTTCTCTTTTGTGGCATGAACTTAGGGTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * ** *
796449 ACTGGTCGGAAGAAAGTGTTTCTTGTGAAACCAAAGCATCAATACCATGTTTCCTTATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * * ** *
796514 CTATGTTTGTGGTGCCTAATCCTGTAAAGAATAGGGATTAGTGTGAGTATTTGTGTTTGACTTAT
131 CTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* *
796579 TTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGC
196 TTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGC
* * * ** * *
796644 ATCAATGTCATGTATCCTAAGGAAGGGAATGTTTTTTTGGTTCCCATTCCCGATAAGAATGGAGA
261 ATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGA
* * * * * *
796709 TTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGG-A
326 CTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGCA
* ** * * *
796773 AAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAATAAGGAGAATGTGTT
391 AAGAAAA-GATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTT
* *
796838 TAAAGTGTCC-AAT-TGCAAAAT
455 TATAGTG-CCTAATCT-CAAAAC
* * ** * * ** * * *
796859 AAATGAAGATCCTTACTAGAATCCATGTTTACCTCATTTAAGGCATGAAATTAGGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
* * *
796924 ATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * *
796989 CTATATTTATGGTGCCTAAT-CTCAAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTA
131 CTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* *
797053 TTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAG
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAG
* * * ** *
797118 CATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATTCCCGATAAGA
260 CATCAATGTCATGTATCCTAATGAAGGGAA--TGTA--T--TTTTGGTTCCCAATCTTGAAAAGA
* * * *
797183 ATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAA
319 TTGGAGACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGG-AAA
* * ** * *
797248 AAAAGGCAAA-AAAAGGATTTCCACACCCAAGAAAACCATCAATATCATTAATCCTAAT-AGGGA
383 ATAGGGCAAAGAAAA-GATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGA-GGA
* *
797311 GAATGTGTTTAAAGTGTCC-AAT-TGCAAAAT
446 GAATGTGTTTATAGTG-CCTAATCT-CAAAAC
* * * ** * * * * * *
797341 AAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTATGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
** * * *
797406 ATTAATGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* *
797471 CTATATTTATGGTGCCTAAT-CTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTA
131 CTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * *
797535 TTTAAGAGACAAACATTGATTCTATCAATAACGGTGGTAAGAAAAGCTTCCCTTGTGGCACCAAA
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTTGCGACACCAAA
* * ** *
797600 GCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGAAAAGATTGGA
259 GCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGA
* * * * *
797665 GACTATTACGAGAATCAATGCTTGTCTTATCTAAGGGTCAAACTTTGATTTTTATGAAAATAGGG
324 GACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGG
* * * **
797730 CAAAGAAAAGATTTCCATGCCAAA-AAAACCATCAATAACATCTATCCCAATGAAAAGAATGTGT
389 CAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGT
* *
797794 TTATAGTGCCTAATCTCAAGAG
454 TTATAGTGCCTAATCTCAAAAC
* * * ** * * * *
797816 GAATGAAGGTTATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATG----GAGACTTTAT-AAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTT-TCAAA
* * * * *
797876 AATTGGTGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAG
65 AATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAG
** * *
797941 ACTACATTTGTGGTGCCTAATCCT-AAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTT
130 ACTATGTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * * *
798005 ATTTAAGAGACAAACATTGATTCTATTAATAACGATGGGAGAAAAGCTTCTCTTGCGACACCAAA
194 ATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAA
* * * ** *
798070 GCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATTCCCGATAAG
259 GCATCAATGTCATGTATCCTAATGAAGGGAA--TGTA--T--TTTTGGTTCCCAATCTTGAAAAG
* * * *
798135 AATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAA
318 ATTGGAGACTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAA
* * * ** * *
798200 AAAAGGCAAAAAAAAGATTTCCACACCCAAGAAAACCATCAATATCATTAATCCTAAT-AGGGAG
383 ATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGA-GGAG
* * *
798264 AATCTGTTTAAAGTGTCC-AAT-TGCAAAAT
447 AATGTGTTTATAGTG-CCTAATCT-CAAAAC
* * * ** * * * * * *
798293 AAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTATGCTTTTCAAAA
1 CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
** * * * *
798358 ATTACTAGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGA
66 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * *
798423 CTATATTTATGGTGCCTAAT-CTCGAAAAGAATGGGGATCAGTATGAGTATTCATATTTATCTTA
131 CTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
798487 TTTAAGAGACAAGCTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTGCGGCACCAAA
195 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTTGCGACACCAAA
* *
798552 GCATCAATATGATGTATCCTAATGAAGGGAA
259 GCATCAATGTCATGTATCCTAATGAAGGGAA
798583 GGGTCAAACT
Statistics
Matches: 9204, Mismatches: 1392, Indels: 296
0.85 0.13 0.03
Matches are distributed among these distances:
466 3 0.00
467 78 0.01
468 6 0.00
469 300 0.03
470 58 0.01
471 152 0.02
472 7 0.00
473 5 0.00
474 925 0.10
475 4463 0.48
476 1783 0.19
477 730 0.08
478 33 0.00
479 2 0.00
480 3 0.00
481 234 0.03
482 369 0.04
483 53 0.01
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (475 bp):
CAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
CTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
TTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGC
ATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGA
CTTTTACGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGCA
AAGAAAAGATTTCCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTT
ATAGTGCCTAATCTCAAAAC
Found at i:790825 original size:951 final size:948
Alignment explanation
Indices: 787362--798582 Score: 13586
Period size: 951 Copynumber: 11.8 Consensus size: 948
787352 TGAAGGCATC
* * * * * *
787362 AATGAAGATGATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTTAAAAA
1 AATGAAGATCATTGCTAGAAT-CATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAA
* * * * * * *
787427 TTGGTGGGAAGAAAGCGTTCCTTGCATAACCAAAGCATCAATATCGTGTATCCTTGTGAAAAGAC
65 TTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
* * * * **
787492 TATGTTTGTGGTGCCTAATCCAGAAAAAAAATAGGGCGTAGTATGAGTATTCATGTTTGTCTTAT
130 TATGTTTATGGTGCCTAATCC--TAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * ** ** *
787557 TT----GATAAACTTAGATTCTATCAATAATAGTAAAAAGAAAAAGCTTCTCTAT-CGACACTAA
193 TTAAGAGACAAACTTTGATTCTATCAATAACGGT-GGAAG-AAAAGCTTCTCT-TGCGACACCAA
** * * * *
787617 ATAATCAATGTCATGTATCCTAAAGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGTTTAG
255 AGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGG
* * * *
787682 AGACTATTACGAGAATCAATGCTTATCTTATTTAAGGGACAAATTTTGATTTTAAGGAAAATAGG
320 AGACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGG
* * * * * * *
787747 GCAAAGAAAAGATTTCCTTGCCAAAAAAAATCGTCAATAACATTTATCCTAACGAGGAAAATGTC
385 GCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTG
* *
787812 TTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGTG
450 TTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAG
* * * *
787877 GCAAGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGTATTAA
515 GCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAA
* * * * *
787942 TACCATGTACCCTAATAAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAAGAATAGGGATTAG
580 TACCATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTG-AAAAGAATGGGGATTAG
* * *
788007 TACGAGTATTCATGTTTGCCTTATTTAAGAGACAAACTTTGATTCTATCCATAACGGTGGAAGAA
644 TATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAA
* * * * *
788072 AAGCTTCTCCTGTGACACCAAAGCATCATTGTCATGTATCCTAATGAAGGGAATGTATTTTTGGC
709 AAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGT
* * * * * * * *
788137 T-CCTATCTTGAAAAGATTGGAGACTATTGCGAGAATCATTGCTTGTCTTATTTAAGGGTCAAAC
774 TCCCAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAAC
* * * *
788201 TTTGAATTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATT
839 TTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATATCATT
* * ***
788266 TATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCGAAGCC
904 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAATG
* * ** * *
788311 AAGGAAGATCATTGTTCTAATCATTGTTTGTCTCTTTTGAGGCATGAACTTAGGCGTTTCAAAAA
1 AATGAAGATCATTGCTAGAATCA-TGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAA
* * * * * *
788376 TTTGTGGGAAGAAGGTGTTTCTTGCTAAAGCAAAGCATCAATACCATGTATCCTTATGCGAAGGC
65 TTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
* * * * * * *
788441 TATGTTTCTGGTGACTAATCCCAAAATGAATAGGGATTACTATGCGTATTCATGTTTGTCTTTTT
130 TATGTTTATGGTGCCTAATCCTAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * *
788506 TAAGAGACAAAATTTGATTCTATCAATAACGGTGGAGGAAAAGCCTCTCTTGCGACACCAAAGCA
194 TAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCA
* * * * *
788571 TTAATTTCATGTATCATAACGAAAGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGAC
259 TCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGAC
* * * *
788636 TGTTAGGAGAATCAAAGCTTCTCTTATTTAAGGGTCAAACTTTGATTTTAAAGAAAATAGGGCAA
324 TGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGCAA
* * * * *
788701 AGAATATATTTCCAGGCCAAAGAAAACCATTAATATCATTTATCCTAATGAGGAGAATGTGTTTA
389 AGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTGTTTA
* * * * *
788766 TAGTGCCTAATCTCGAAACCAATGAAGATGATTGTTCGAATCCTTGTTTGTCTTTTTTGAGGCTT
454 TAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAGGCAT
* * *
788831 GAACTTAGGCTTTTCAAAAATTAGTGGGAAGAAAGCG-TTCATTGCAAAACCAAAGCATCAATAT
519 GAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTC-TTGCAAAACCAAAGCATCAATAC
* * * * *
788895 CGTGTAACCTTGTGAGAAAACTATGTTTGTGGTGCCTAATCCTGAAATA-AATGGAGATTAGTAT
583 CATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAA-AGAATGGGGATTAGTAT
* * *
788959 GAGTATTCATGTTTGTCTTATTTAAGAGATAAACTGTGATTCTATCAATAATGGTGGAAGAAAAG
647 GAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAG
* *
789024 CTCCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGCTTTTGGTTCC
712 CTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
**
789089 CAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAGGGGTCAAACTTT
777 CAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTT
* * * * * * * *
789154 GATTTT-AGAGAGAATAGGGTAAAGAAAAGTTTTCCAAGCCAAAAAAAACCAACAATTTCATTGA
842 GATTTTAAGA-AAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATATCATTTA
*
789218 TCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
906 TCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAATG
* * * * * *
789261 AATGAAGATCCTTACTAGAATCCATATTTATCTCATTTGAGGCACGAACTTAGACTTTTCAAAAA
1 AATGAAGATCATTGCTAGAAT-CATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAA
* * *
789326 TTTGG-GGGAAGAAAGTGTTTCTTGCAAAATCAAGGCATCAATATCGA-GTATCCTTATGAGAAG
65 -TTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATA-CCATGTATCCTTATGAGAAG
* * *
789389 ACTATGTATATGGTGCCTAATCCTTCAAAAAGAATAGGGATTAGTAGGAGTATTCATGTTTGTCC
128 ACTATGTTTATGGTGCCTAATCC-T--AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT-C
* * * *
789454 TT-TTTAAGAGATAAACTTTGATTCTATTAATAACGATGGAAGAAAAGCTTCTTTTGC-A-A-C-
189 TTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCA
* * * * * *
789514 --TC-T-AATGCCATATATCCTATTGAAGGGAATGTACTTTTGGTTCCCAATCTTAAAAAGATTG
254 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTG
* * * * * * *
789575 GAGAATGATATGAGAATCATTGTTTGTCTCATTTAAGGGTCAAACTTTTATTTTAAGGAAAATAG
319 GAGACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
* * *
789640 GGCAAATAAAAGATTTCCTTGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGAAGAATGT
384 GGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGT
* * * * * * * *
789705 GTTTTTAGTGCCCAATCTCAAAACAAATAAAAATCATTGTTCGAATCCTTATTTGTCACTTTTGA
449 GTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGA
* * * * * *
789770 GGCATGAACTTAGACTTTACAAAAATTGGAGGGAAGAAACTGTTTCTTGAAAAACCAAGGCATCA
514 GGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCA
* * * ** * * * **
789835 ATATCGTGTATCCTTATGCGAAGTTTATGTTTGTGGTGCCTAATCTTGGAATGGGTGGGGATTAG
579 ATACCATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAG
* * * *
789900 TATGTGTATTCATGTTTGTCTTTTTTAGGAGACAAACTTTGATTCTATCAATAACGGTGGTAGAA
644 TATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAA
* * *
789965 AAGCTTCTCTTGCGACACCAAAGCGTCAATGTTACGTATCCTAATGAAGGGAATGTGTTTTTGGT
709 AAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGT
* ** * * * * *
790030 TCCTAATGATGAACACAATAGAGACTTTTATAAGAATCAAGGCTTGTCTCATTTAAAGGTCAAAC
774 TCCCAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAAC
* * *
790095 TTTGATTTTAAGAAAAATTGGGCAAAGAAAAGATTTCCATGCCAAAGGAAACCATCAATATCATT
839 TTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATATCATT
* * **
790160 TATCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCGAAACC
904 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAATG
* * * * * * *
790205 AAGGAAGAGCAATGTTTGAATCATTGTTTGTCTCTTTTGAGGTATGAACTTAGGCTTTTCAAAAA
1 AATGAAGATCATTGCTAGAATCA-TGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAA
* * * * *
790270 TTGTTGGGAAAAAAAGTGTTTCTTGCGAAACCATAGCATCAATACCATGTATCCTTATGCGAAGA
65 TTGGTGGG-AAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * * * * * *
790335 CAATGTTTGTGGTTCCTAATCCTAAAATGAGTGGGGATTAGTATGCGTATTTATGTTTTTCTT-T
129 CTATGTTTATGGTGCCTAATCCTAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * *
790399 TTCAATAGACAAACTTTGATTCTATCAATAACGGTGG-AGCAGAAGCCTCTCTTGCGACACCAAA
193 TT-AAGAGACAAACTTTGATTCTATCAATAACGGTGGAAG-AAAAGCTTCTCTTGCGACACCAAA
* * * *
790463 GCATTAATTTCATGTATCATAATGAAAGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGA
256 GCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGA
* * * * *
790528 GACTGTTAGGAGAATCAAAGCTTCTCTTATTTAAGGCTCAAACTTTGATTTTAAAGAAAATAGGG
321 GACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGG
* * * * *
790593 CAAAGAATATATTTCCATGGCAAAGAAAACCATTAATATCATTTATCCTAATGAGGAGAATGTGT
386 CAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTGT
*
790658 TTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGTGG
451 TTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAGG
*
790723 CAAGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAAT
516 CATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAAT
* * *
790788 ACCATGTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAAGAATGGGGATTAGT
581 ACCATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCT-GAAAAGAATGGGGATTAGT
* *
790853 ATGAATATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCCATAACGGTGGAAGAAA
645 ATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAA
* * * * * * *
790918 AGCTTCTCTTGTGACACTAAAGCATCAACGTCTTATATCCTAATGAAGGGAATGTGGTTTTGATT
710 AGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTT
* * * * * * *
790983 CCTAATCATGATAAGAATGGAGTCTTTTACAAGAATCAATGCATGTCTCATTTGAAGGTTAAACT
775 CCCAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACT
* * * *
791048 TTGATTTTAGGAAAAATAAGGCAAAAAAAAGATTTCCACGCCAAAGAAAACCATCAATATCATTA
840 TTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATATCATTT
*
791113 ATCCTAATGAGGAGAATGTGTTTATAGTGTCC-AATCACAAAATG
905 ATCCTAATGAGGAGAATGTGTTTATAGTG-CCTAATCTCAAAATG
* * * * * *
791157 AATGAAAATCCTTACTAGAATCATGTTTGTCTCACTTAAGGCATGAGCTTAGGCTTTTCAAAAAT
1 AATGAAGATCATTGCTAGAATCATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAAT
** ** * *
791222 TGGAAGGAAGAAAACGTTTCTTGCAAAACCAAAGTACCAATACCATGTATCCTTATGAGAAGACT
66 TGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACT
* *
791287 ATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGAGTATTCATGTTTGTCTTATTT
131 ATGTTTATGGTGCCTAATCCT-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTT
** * *
791352 AAGAGACAAACTTTGATTCTATCAATAACAATGGTAACG-AAAGCCTCTCTTACGACACCAAAGC
195 AAGAGACAAACTTTGATTCTATCAATAACGGTGG-AA-GAAAAGCTTCTCTTGCGACACCAAAGC
* * * * **
791416 ATCAATGTCAAGTATCCTAATGAAGGGAATATATTTTTGGTACCCAATATTGAAAAGATTATAGA
258 ATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGA
* * * *
791481 CTATTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAACAAGGTA
323 CTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGCA
*
791546 AAGAAAATATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTGTTT
388 AAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTGTTT
* * * * * *
791611 AAAATGCCTAATCTCAAAACCAATGAAGATTATTGTTCGAATTCTTGTTTGTCT-TTTTTAGGGC
453 ATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGA-GGC
* * *
791675 ATGAACTTAGGCTTTTCAAAAATTGGTGAGAAGAAAGTGTTTCTTGCGAAACCAAAGCATTAATA
517 ATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATA
* * * *
791740 CCATGTATCCTTATGCGAAGACTATGTTTGGGGTGCCTAATCCTGAAATGAGTGGGGATTAGTAT
582 CCATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTAT
* * * *
791805 GTGTATTCATGTTTGCCTTTTTTAAGAGACAAACTTTGATTTTATCAATAACGGTGGAAGAAAAG
647 GAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAG
* * * * * * *
791870 CTTTTCTTGTGACACAAAATCATCAATGTCATCTATCCTAATGAAAGGAATGTGTTGTTGGTTCC
712 CTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* ** * * ** *
791935 TAATCTTGAAAAGCTTGGAGACTATTACGAGAATCAATGCTTGTCTTTTTTAAGGGTCAAACTTT
777 CAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTT
* * * * * * * *
792000 AATTTTAAGGAAAATAAGGCAAAGAAAAGATATCCATGCCAGAGAAAACCATTAATAACATTTA-
842 GATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATATCATTTAT
* *
792064 CCTTAAAGAGGAGAATGTGTTTATAGTGACTAATCTCAAAACT-
907 CC-TAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAA-TG
* * * * ** * *
792107 AATGAAGTTCATTGTTCGAATCCTTGTTTGTCTTTTTTGAGGCGTGAACTTAGGCTTTTCAAAAT
1 AATGAAGATCATTGCTAGAAT-CATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAA
* *
792172 TTGGTAGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGAC
65 TTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
* * * *
792237 TATGTTTGTGGTGCCTAATCCTAAAATGAGTGGGGATTAGTATGTGTATTCATGTTTGTCTTTTT
130 TATGTTTATGGTGCCTAATCCTAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
*
792302 TAAGAGACAAACTTTGATTCCATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCA
194 TAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCA
* * * *
792367 TCAATGTCAGGTATCCTAATGAAGGAAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAC
259 TCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGAC
* * * *
792432 TTTTACGAGAATCAATACTT-TCTCATTTATGGGTCAAACTTTGATTTTAAGGAAAATAGGGCAA
324 TGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGCAA
* * * * * *
792496 AGAAAAGTTTTCCAAGCCAAAGAAAACCATCAATAACATCTATCCTAATAAGAAGAATTTGTTTA
389 AGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTGTTTA
*
792561 TAGTGCCTAATCTCAAAACTAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAGGCAT
454 TAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAGGCAT
* * * *
792626 GACCTTAGGCTTTTCAAAAATTGGTGGGAAAAAAGTGTTTCTTTCGAAACCAAAGCATCAATACC
519 GAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACC
* * * * *
792691 GTGTATCCTTATGTGAAGACTATGTTTGTGGTGCCTAATCCTGAAATGAGTGGGGATTAGTATGT
584 ATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGA
* *
792756 GTATTAATGTTTGTCTTTTTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCT
649 GTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCT
* * * *
792821 TCTCTTGCGACCCCAAAGCATCAATGTCAAGTACCCTAATGAATGGAATGTGTTTTTGGTTCCCA
714 TCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCA
** * * * * *
792886 ATCTTGAAAAGAATAGG-GACTTTTATGAGAATCAAGGCTTGCCTTATTTAAGGGCCAAACTTTG
779 ATCTTGAAAAGAAT-GGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTG
* * * * * * * *
792950 AGTTTAAGGAAAGTAGGGCAAATAAAATATTTCCACGGCAAAGGAAACCATAAATATCATTTATC
843 ATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATATCATTTATC
* **
793015 CTAATAAGGAGAATGTGTTTATAGTGCCTAATCTCAAAACC
908 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAATG
* * *
793056 AATGAAGATCATTGTTCA-AATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAA
1 AATGAAGATCATTGCT-AGAAT-CATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAA
*
793120 ATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
64 ATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGA
* * *
793185 CTATGTTTATGGTGCCAAATCCTGAAAGGAATGAGG-TGTAGTATGAGTATTCATGTTTGTCTTA
129 CTATGTTTATGGTGCCTAATCCT-AAAAGAATGGGGAT-TAGTATGAGTATTCATGTTTGTCTTA
* * * *
793249 TTTTAGAGACAAACTTTGATTCCATCAATAACAGTGGAAAGAAAAAGCTTCTCCTT-CGACACAA
192 TTTAAGAGACAAACTTTGATTCTATCAATAACGGTGG-AAG-AAAAGCTTCT-CTTGCGACACCA
* ** * * *
793313 AAGGATCACCGTCATGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGTTTG
254 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTG
* * *
793378 GAGACTGTTACAAGAATCAATGCATATCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
319 GAGACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
* * *
793443 GGCAAA-ACAAAGATTTCCATGCCAAAGAAAACCATCAATAACGTTTA-CCTTAAAGAAGAGAAT
384 GGCAAAGA-AAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCC-TAATGAGGAGAAT
* * * * * * * **
793506 GTATTTATAGTGCATAATCCCAAAACGAATAAAGGTCATTGTTCGAATCCTTGTTTGTGACTTTT
447 GTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTT
* * ** *
793571 GAGGCATGAACTTAGACTTTACAAAAATTGGTGGGAAGAAACCGTTCCTTGCAAAACCAAAGCAT
512 GAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCAT
* * * *
793636 CAATATCATGTATCCTCATGAGAAGACTATGTTTGTGGTGCCTAATCATGAAATA-AATAGGGAT
577 CAATACCATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAA-AGAATGGGGAT
* * *
793700 TAGTATGAGTATTCATGTTTATCTTTTTTATA-AGACAAACTTTGATTCTATCAAGAACGGTGGA
641 TAGTATGAGTATTCATGTTTGTCTTATTTA-AGAGACAAACTTTGATTCTATCAATAACGGTGGA
* *
793764 AGAAAAGCTTCTCTTGCTACACCAAAGCATCAATGTCTTGTATCCTAATGAAGGGAATGTGTTTT
705 AGAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTT
* ** * *
793829 TGGTTCCCAATCTTGAAAAGAATGGGGACTTTTAGGAGAATCAACGCTTGTCTAATTT-AAGAGT
770 TGGTTCCCAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAG-GT
* * * *
793893 AAAACTTTGATTTTAAGAAAAAT-GTGGCAAAAAAAAGTTTTCCAAGCCAAAGAAAACCATCAAT
834 CAAACTTTGATTTTAAGAAAAATAG-GGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAAT
* * * *
793957 TTCATTTATCCTAACGAGGATAATGTGTTTATAGTGCCTAATCACAAAATG
898 ATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAATG
* * ** **
794008 AATGAAGATCCTTGCTAGAACCCACATTTGTCTCATTTGAGGCATGAACTTATACTTTTCAAAAA
1 AATGAAGATCATTGCTAGAA-TCATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAA
* ** * * ** *
794073 TTTGTGGGAAGAAACCGTTTCTTGCGAAATCAGGGCATCAATATCGA-GTATCCTTATGAGAAGA
65 TTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATA-CCATGTATCCTTATGAGAAGA
* *
794137 CTATGTTTATGGTGCCTAATCCTGAAAAGAATAGGGATTAGTATGAGTGTTCATGTTTGTCTTAT
129 CTATGTTTATGGTGCCTAATCCT-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
794202 TTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGC
193 TTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGC
* * *
794267 TTCAATGTCATG-AGTCCTATTGAAAGGAATGTATTTTTGGTTCCCAATCTT-AAAAGGATTGGA
258 ATCAATGTCATGTA-TCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAA-GATTGGA
* * *
794330 GACTGTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAGCTTT-ATGTTTAAGGAAAATAGG
321 GACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGAT-TTTAAGGAAAATAGG
* * * * * **
794394 GCAACA-AAAAGATTTCGATGCCAAAAAAAACCGTCAATAATATTTACCCTAATGAGGAGTGTGT
385 GCAA-AGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGT
* * * * *
794458 GCTTATAGTGCCTAATCTCAAAACCAGTGAAGGTCATTGTTCAAATCCCTGTTTGTCTCTTTTGT
449 GTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGA
* * * * * * **
794523 GGCATGAACATAGGGTTTTCAAAAACTGGGGGGAAAAAAGCGTTTCTTGTGAAACCAAAGCATCA
514 GGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCA
* * * *
794588 ATACCATGTTTTCTTATGAGAAGACTATGTTTATGGTGCCTAATCCT-ATAAAGAATAGGGATTA
579 ATACCATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGA-AAAGAATGGGGATTA
* * * *
794652 GTGTGAGTATTCGTGTTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGA
643 GTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGA
*
794717 AAAGCTTATCTTGCGACACCAAAGCATCAATGTCATGTATCCT-ATGGAAGGGAATGTGTTTTTG
708 AAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAT-GAAGGGAATGTGTTTTTG
** * *
794781 GTTCCCTTTCCTGATAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAA
772 GTTCCCAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAA
* * * * * *
794846 ACTTTGATTTTAAGGAAAAA-AAGGCAAAGAAAAGATTTCCACACCAAATAAAACCGTAAATATT
837 ACTTTGATTTTAA-GAAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATATC
* * * *
794910 ATTAATCCTAATGAGGAGAATGTGTTTAAAGTGTCC-AATCACAAAATA
901 ATTTATCCTAATGAGGAGAATGTGTTTATAGTG-CCTAATCTCAAAATG
* *
794958 AATGAAGATCATTGCTAGAATCATGTTTGTCACATTTAAGGCATGAACTTAGGCTTTTCAAAAAT
1 AATGAAGATCATTGCTAGAATCATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAAT
* * * * *
795023 TGGTGGGAAGAAAGCGCTTCTTGCAAAACCAATGTATCAAATACCATGTATCCATATGAGAAGAC
66 TGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATC-AATACCATGTATCCTTATGAGAAGAC
* * * *
795088 TATGTGTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTCTGTCTTATT
130 TATGTTTATGGTGCCTAATC-CTAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * * * * *
795153 TAAGACACAAACTTTGATTCTATCAATACCAGTGGTAAGAGAAGCTTCTATTGCGGCACCGAAGC
194 TAAGAGACAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTTGCGACACCAAAGC
* * * * * *
795218 ATCAATGCCATGTATCCTAATGAAGGGAATGCATTTTTGGCTCTCAATATTGAAAAGTTTGGAGA
258 ATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGA
* *
795283 CTATTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAACGAAAATAGGGCA
323 CTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGCA
* * * * *
795348 AAGAAAAGATTTTCATGCCAAAGAAAACCATCAATAACATATATCCTAATGTGAAGTATGTGTTT
388 AAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTGTTT
* * * * *
795413 ATAGTGCCTAATTTCAAAACCAGTGAAGGTCATTGTTCAAATCCCTGTTTGTCTCTTTTGTGGCA
453 ATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAGGCA
* * * **
795478 TGAACTTAGGGTTTTCAAAAACTGGTCGGAAGAAAGTGTTTCTTGTGAAACCAAAGCATCAATAC
518 TGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATAC
* * * *
795543 CATGTTTCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGTAAAGAATAGGGATTAGTGTG
583 CATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATG
* * * *
795608 AGCATTCATGTTTGTCTTATTTAAGAGATAAACATTGATTCTATCAATAACAGTTGG-AGAAAAG
648 AGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAAC-GGTGGAAGAAAAG
* *
795672 CTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAGGAGGGGAATGTGTTTTTGGTTCC
712 CTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
* * *
795737 CATTCCT-AATAAGAATGGAGACTTTTACAAGTATCAATGCTTGTCTCATTTAAAGGTCAAACTT
777 CAATCTTGAA-AAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTT
* * *
795801 TGATTTTAAGGAAAAA-AAGGCAAA-AAAAGGATTTCCACACCAGAGAAAACCATCAATATCATT
841 TGATTTTAA-GAAAAATAGGGCAAAGAAAA-GATTTCCACGCCAAAGAAAACCATCAATATCATT
* * * * *
795864 AATCCTAAGGAGGAGAATGTGTTTAAACTGTCC-AAT-TGCAAAATA
904 TATCCTAATGAGGAGAATGTGTTTATAGTG-CCTAATCT-CAAAATG
* * * *
795909 AATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTAAGGCAAGAACTTAGGCTTTTCAAAAA
1 AATGAAGATCATTGCTAGAAT-CATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAA
* * * *
795974 TTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATAGCATGTATCCATATGAGAAGAC
65 TTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
* * *
796039 TATGTTTATGGTGCCTAATCTCGAAAAGAATGGAGATTAGTTTGAGTATTCATGTTTGTCTTATT
130 TATGTTTATGGTGCCTAATC-CTAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
796104 TAAGAGGCAAACTTTGATTCTATCAATACCAGTGGTAA-AAGAAGCTTCTCTTGCGGCACCAAAG
194 TAAGAGACAAACTTTGATTCTATCAATAACGGTGG-AAGAA-AAGCTTCTCTTGCGACACCAAAG
* * * * ** *
796168 CATCAATCTCATGTATCCAAATGAAGGGAATGTATTTTTGGCTCTCAAAATTGAAAAGATTGAAG
257 CATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAG
* *
796233 ACTATTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAACGAAAATAGGGC
322 ACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGC
* *
796298 AAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATCTATCCTAATGA-GAAATATGTGT
387 AAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGA-ATGTGT
* * * * *
796362 TTATAGTGCCTAATCTCAAAACCAGTGAAGGTCATTGTTCAAATCCCTGTTTTTCTCTTTTGTGG
451 TTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAGG
* * * **
796427 CATGAACTTAGGGTTTTCAAAAACTGGTCGGAAGAAAGTGTTTCTTGTGAAACCAAAGCATCAAT
516 CATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAAT
* * * *
796492 ACCATGTTTCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGTAAAGAATAGGGATTAGTG
581 ACCATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTA
** * * *
796557 TGAGTATTTGTGTTTGACTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAA
646 TGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAA
* *
796622 GCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAGGAAGGGAATGTTTTTTTGGTTC
711 GCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTC
* ** * * *
796687 CCATTCCCGATAAGAATGGAGATTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTT
776 CCAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTT
* * * *
796752 TGATTTTAAGGAAAAA-AAGG-AAAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATT
841 TGATTTTAA-GAAAAATAGGGCAAAGAAAA-GATTTCCACGCCAAAGAAAACCATCAATATCATT
* * * *
796815 AATCCTAATAAGGAGAATGTGTTTAAAGTGTCC-AAT-TGCAAAATA
904 TATCCTAATGAGGAGAATGTGTTTATAGTG-CCTAATCT-CAAAATG
* * ** * *
796860 AATGAAGATCCTTACTAGAATCCATGTTTACCTCATTTAAGGCATGAAATTAGGCTTTTCAAAAA
1 AATGAAGATCATTGCTAGAAT-CATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAA
* * *
796925 TTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGAC
65 TTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGAC
* * *
796990 TATATTTATGGTGCCTAATCTCAAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATT
130 TATGTTTATGGTGCCTAATC-CTAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* *
797055 TAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCA
194 TAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCA
* * * ** * *
797120 TTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATTCCCGATAAGAAT
259 TCAATGTCATGTATCCTAATGAAGGGAA--TGTA--T--TTTTGGTTCCCAATCTTGAAAAGATT
* * * * * *
797185 GGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAA
318 GGAGACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGG-AAAAT
* ** * * *
797250 AAGGCAAA-AAAAGGATTTCCACACCCAAGAAAACCATCAATATCATTAATCCTAAT-AGGGAGA
382 AGGGCAAAGAAAA-GATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGA-GGAGA
* ** * * ** * *
797313 ATGTGTTTAAAGTGTCC-AAT-TGCAAAATAAATGGAGATCCTTACT-AGAATCCATGTTTATCT
445 ATGTGTTTATAGTG-CCTAATCT-CAAAACCAATGAAGATCATTGTTCA-AATCCTTGTTTGTCT
* * * ** *
797375 CATTTAAGGCATGAACTTATGCTTTTCAAAAATTAATGGGAAGAAAGTGTTTTTTGCAAAACCAA
507 CTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAA
* * * *
797440 AGTATCAATACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAAT-CTCGAAAAGAATG
572 AGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCT-GAAAAGAATG
* *
797504 GGGATTAGTATGAGTATTCATATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGG
636 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGG
* * * * *
797569 TGGTAAGAAAAGCTTCCCTTGTGGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGT
701 TGG-AAGAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* ** * * * * * *
797634 ATTTTTGGCACCCAATTTTGAAAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCTAA
765 GTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAA
* * *
797699 GGGTCAAACTTTGATTTTTATG-AAAATAGGGCAAAGAAAAGATTTCCATGCCAAA-AAAACCAT
830 AGGTCAAACTTTGA-TTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCAT
* * * ** * *
797762 CAATAACATCTATCCCAATGAAAAGAATGTGTTTATAGTGCCTAATCTCAAGAGG
894 CAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAATG
* * *
797817 AATGAAGGTTATCATT-C--GAATCCTGGTTTGTCTC-TTTCGAGGCATG----GAGACTTTAT-
1 AATGAA-G--ATCATTGCTAGAATCAT-GTTTGTCTCATTT-GAGGCATGAACTTAGGCTTT-TC
* * * * *
797873 AAAAATTGGTGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAG
60 AAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAG
** * *
797938 AAGACTACATTTGTGGTGCCTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTC
125 AAGACTATGTTTATGGTGCCTAATCCTAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGTC
* * * *
798003 TTATTTAAGAGACAAACATTGATTCTATTAATAACGATGGGAGAAAAGCTTCTCTTGCGACACCA
189 TTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCA
* * * ** *
798068 AAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATTCCCGATA
254 AAGCATCAATGTCATGTATCCTAATGAAGGGAA--TGTA--T--TTTTGGTTCCCAATCTTGAAA
* * * * * *
798133 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
313 AGATTGGAGACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGA
* * * ** * * *
798198 AAAAAAGGCAAAAAAAAGATTTCCACACCCAAGAAAACCATCAATATCATTAATCCTAAT-AGGG
378 AAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGA-GG
* * ** * * ** * *
798262 AGAATCTGTTTAAAGTGTCC-AAT-TGCAAAATAAATGGAGATCCTTACT-AGAATCCATGTTTA
442 AGAATGTGTTTATAGTG-CCTAATCT-CAAAACCAATGAAGATCATTGTTCA-AATCCTTGTTTG
* * * ** * *
798324 TCTCATTTAAGGCATGAACTTATGCTTTTCAAAAATTACTAGGAAGAAAGTGTTTTTTGCAAAAC
504 TCTCTTTTGAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAAC
* * * *
798389 CAAAGTATCAATACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAAT-CTCGAAAAGA
569 CAAAGCATCAATACCATGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCT-GAAAAGA
* * * *
798453 ATGGGGATCAGTATGAGTATTCATATTTATCTTATTTAAGAGACAAGCTTTGATTCTATCAATAA
633 ATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAA
* * * *
798518 CAGTGGTAAGAAAAGCTTCTCTTGCGGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAA
698 CGGTGG-AAGAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAA
798583 GGGTCAAACT
Statistics
Matches: 9021, Mismatches: 1116, Indels: 267
0.87 0.11 0.03
Matches are distributed among these distances:
942 12 0.00
943 73 0.01
944 640 0.07
945 72 0.01
946 2 0.00
947 4 0.00
948 35 0.00
949 1087 0.12
950 1921 0.21
951 2687 0.30
952 1579 0.18
953 327 0.04
954 2 0.00
956 85 0.01
957 337 0.04
958 140 0.02
959 13 0.00
960 5 0.00
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (948 bp):
AATGAAGATCATTGCTAGAATCATGTTTGTCTCATTTGAGGCATGAACTTAGGCTTTTCAAAAAT
TGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACT
ATGTTTATGGTGCCTAATCCTAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
AGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATC
AATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGACTG
TTACGAGAATCAATGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGGGCAAAG
AAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTGTTTATA
GTGCCTAATCTCAAAACCAATGAAGATCATTGTTCAAATCCTTGTTTGTCTCTTTTGAGGCATGA
ACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATACCAT
GTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGT
ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTC
TCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAAT
CTTGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATT
TTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCCAAAGAAAACCATCAATATCATTTATCCTA
ATGAGGAGAATGTGTTTATAGTGCCTAATCTCAAAATG
Found at i:791876 original size:158 final size:158
Alignment explanation
Indices: 791227--792845 Score: 468
Period size: 158 Copynumber: 10.2 Consensus size: 158
791217 AAAATTGGAA
* * * * *
791227 GGAAGAAAA-CGTTTCTTGCAAAACCAAAGTACCAATACCATGTATCCTTATGAGAAGACTATGT
1 GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGACTATGT
* * * * * * *
791291 TTATGGTGCCTAATCTTGAAAA-GAATGGGGATTTGTATGAGTATTCATGTTTGTCTTATTTAAG
66 TTGTGGTGCCTAATCCT-AAAATGAGTGGAGATTAGTATGTGTATTCATGTTTGTCTTTTTTAAG
* **
791355 AGACAAACTTTGATTCTATCAATAACAAT
130 AGACAAACTTTGATTTTATCAATAACGGT
* * * * ** * * *
791384 GGTAACG-AAAGCCTCTCTTACGACACCAAAGCATCAATGTCAAGTATCCTAAT--GAAGGGAAT
1 GG-AA-GAAAAGCTTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAA--GACT
* * * * ** * ** * * * * * * *
791446 ATATTTTTGGTACCCAATATTGAAAA-GATTATAGACTATTACGAG-AATCAATGCTTGTCTTAT
62 ATGTTTGTGGTGCCTAATCCT-AAAATGAGTGGAGATTAGTATGTGTATTC-ATGTTTGTCTTTT
* * **
791509 TTAAGGGTCAAACTTTGATTTTAAGGAA-AACAAGGT
125 TTAAGAGACAAACTTTGATTTT-ATCAATAAC--GGT
* ** * * * ** * * * * * * * *
791545 -AAAGAAAATATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGGAGAATGTGT
1 GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGACTATGT
**** ** * * * *
791609 TTAAAATGCCTAAT-CTCAAAACCAATGAAGATTA-T-TGTTCGAATTCTTGTTTGTCTTTTTT-
66 TTGTGGTGCCTAATCCT-AAAATGAGTGGAGATTAGTATG-T-GTATTCATGTTTGTCTTTTTTA
* * ** * *
791670 AG-GGCATGAACTTAGGCTTT-TCAAAAATTGGT
128 AGAGACA--AACTTTGATTTTATCAATAA-CGGT
*
791702 GAGAAG-AAAG-TGTTTCTTGCGAAACCAAAGCATTAATACCATGTATCCTTATGCGAAGACTAT
1 G-GAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGACTAT
* * * *
791765 GTTTGGGGTGCCTAATCCTGAAATGAGTGGGGATTAGTATGTGTATTCATGTTTGCCTTTTTTAA
64 GTTTGTGGTGCCTAATCCTAAAATGAGTGGAGATTAGTATGTGTATTCATGTTTGTCTTTTTTAA
791830 GAGACAAACTTTGATTTTATCAATAACGGT
129 GAGACAAACTTTGATTTTATCAATAACGGT
* * * * ** * * *
791860 GGAAGAAAAGCTTTTCTTGTGACACAAAATCATCAATGTCATCTATCCTAATG-AAAGGA--ATG
1 GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAA-GACTATG
* * ** * * * * * *
791922 TGTTGTTGGTTCCTAATCTTGAAAA-GCTTGGAGACTATTACGAG-AATCAATGCTTGTCTTTTT
65 T-TTG-TGGTGCCTAATCCT-AAAATGAGTGGAGATTAGTATGTGTATTC-ATGTTTGTCTTTTT
* * * **
791985 TAAGGGTCAAACTTTAATTTTAAGGAAAATAA-GG-
126 TAAGAGACAAACTTTGATTTT-A--TCAATAACGGT
** * * * * * * ** * * * * * * * * *
792019 CAAAGAAAAGATATCCATGCCAGAGAAAACCATTAATAACATTTA-CCTTAAAGAGGAGAATGTG
1 GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTT-ATGCGAAGACTATG
* * * * * * * *
792083 TTTATAGTGACTAAT-CTCAAAACT-AATGAAG-TTCA-T-TGTTCGAATCCTTGTTTGTCTTTT
65 TTTGTGGTGCCTAATCCT-AAAA-TGAGTGGAGATT-AGTATG-T-GTATTCATGTTTGTCTTTT
* * * ** *
792143 TT--GAGGCGTGAACTTAGGCTTT-TCAA-AATTTGGT
125 TTAAGAGAC--AAACTTTGATTTTATCAATAA--CGGT
*
792177 AGGAAG-AAAG-TGTTTCTTGCAAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGACTAT
1 -GGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGACTAT
*
792240 GTTTGTGGTGCCTAATCCTAAAATGAGTGGGGATTAGTATGTGTATTCATGTTTGTCTTTTTTAA
64 GTTTGTGGTGCCTAATCCTAAAATGAGTGGAGATTAGTATGTGTATTCATGTTTGTCTTTTTTAA
**
792305 GAGACAAACTTTGATTCCATCAATAACGGT
129 GAGACAAACTTTGATTTTATCAATAACGGT
* * ** * * * *
792335 GGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCAGGTATCCTAAT--GAAGGAAATGT
1 GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAA-G-ACTAT
* * * * * * * * * ** **
792398 GTTTTTGGTTCCCAATCTTGAAAA-GAATGGAGACTT-TTACGAG-AATCAATACTT-TCTCATT
64 GTTTGTGGTGCCTAATCCT-AAAATGAGTGGAGA-TTAGTATGTGTATTC-ATGTTTGTCTTTTT
* * * ** *
792459 TATGGGTCAAACTTTGATTTTAAGGAA-AATAGG-
126 TAAGAGACAAACTTTGATTTT-ATCAATAA-CGGT
* ** * ** * * * * ** * *
792492 GCAAAGAAAAG-TTTTCCAAGCCAAAGAAAACCATCAATAACATCTATCCTAATAAGAAGAATTT
1 G-GAAGAAAAGCTTTT-CTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGACTAT
* * * * * * * *
792556 GTTTATAGTGCCTAAT-CTCAAAACT-AATGAAGATCA-T-TGT-TCAAATCCTTGTTTGTCTCT
64 GTTTGTGGTGCCTAATCCT-AAAA-TGAGTGGAGATTAGTATGTGT---ATTCATGTTTGTCTTT
* * * ** * *
792616 TTT--GAGGCATGACCTTAGGCTTT-TCAAAAATTGGT
124 TTTAAGAGACA--AACTTTGATTTTATCAATAA-CGGT
* * *
792651 GGGAA-AAAAG-TGTTTCTTTCGAAACCAAAGCATCAATACCGTGTATCCTTATGTGAAGACTAT
1 -GGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGACTAT
* * *
792714 GTTTGTGGTGCCTAATCCTGAAATGAGTGGGGATTAGTATGTGTATTAATGTTTGTCTTTTTTAA
64 GTTTGTGGTGCCTAATCCTAAAATGAGTGGAGATTAGTATGTGTATTCATGTTTGTCTTTTTTAA
*
792779 GAGACAAACTTTGATTCTATCAATAACGGT
129 GAGACAAACTTTGATTTTATCAATAACGGT
* **
792809 GGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATCAAT
1 GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAAT
792846 GTCAAGTACC
Statistics
Matches: 1025, Mismatches: 333, Indels: 207
0.65 0.21 0.13
Matches are distributed among these distances:
154 2 0.00
155 2 0.00
156 8 0.01
157 89 0.09
158 552 0.54
159 322 0.31
160 38 0.04
161 12 0.01
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.33
Consensus pattern (158 bp):
GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGCGAAGACTATGT
TTGTGGTGCCTAATCCTAAAATGAGTGGAGATTAGTATGTGTATTCATGTTTGTCTTTTTTAAGA
GACAAACTTTGATTTTATCAATAACGGT
Found at i:800425 original size:952 final size:952
Alignment explanation
Indices: 798581--810554 Score: 18144
Period size: 952 Copynumber: 12.6 Consensus size: 952
798571 TAATGAAGGG
* *
798581 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAATGATTTCCATGCCAAAAAAACAAT
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
* *
798646 CAATAACATCTATCATATTGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
66 CAATAACATCTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
* *
798711 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGGAGACTTTACAAAAATTGGTGGGAAGAAA
131 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGGGAAGAAA
798776 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
196 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
798841 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
261 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
798906 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
326 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
798971 CCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
391 CCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
*
799036 GAATCAACGCTTATCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
456 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
799101 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
521 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
* *
799166 AATTGAAAAATAAATGGAGATCCTTACTAGAATACATGTTTATCTCATTTAAGGCATGAACTTAT
586 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
* *
799231 GCTTTTCAAAAATTACTAGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATATCATGTATCC
651 GCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
*
799296 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTATTATGAGTATTCAT
716 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
*
799361 ATTTATCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
781 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
* * *
799426 CGGCACCAAAGTATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTAA
846 CGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
799491 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
911 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
799533 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
* *
799598 CAATAACATCTATCCCAATGAGAAGAATGTGTTCATAGTGCCTAATCTCAAAAGGAATGAAGGTT
66 CAATAACATCTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
* *
799663 ATCATTCGAATCCTGGTTTGTCTCTTTCAAGGCATGAAGACTTTACAAAAATTGGCGAGAAGAAA
131 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGGGAAGAAA
*
799728 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGCATCCTTATGAGAAGACTATGTTTGTGGTGC
196 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
799793 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
261 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
799858 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
326 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
*
799923 CCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
391 CCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
*
799988 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAAGAAAAAAAGGCAAAAAAAGGA
456 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
*
800053 TTTCCACACCAAGGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
521 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
800118 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
586 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
*
800183 GCTTTTCAAAAATTTCTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
651 GCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
* * *
800248 ATATGAAAAGACTATATTTATGGTTCCTATTCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
716 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
* *
800313 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATTAATAATAGTGGTAAGAAAAGCTTCTCTTG
781 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
*
800378 CGGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
846 CGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
800443 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
911 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
* *
800485 AAGGGTCAAACTTTGATTTTTATCAAAATAGGGCAAAGAAAAGATTTCCGTGCCAAAAAAACCAT
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
* *
800550 CAATAACATCTATCCCAATGAAAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
66 CAATAACATCTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
*
800615 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGGAGACTTTACAAAAATTGGCGGGAAGAAA
131 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGGGAAGAAA
800680 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
196 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
* *
800745 CTAATCCTAAAATGAATGGGGATTAGTATAGGTATTCATGTTTGTCTCATTTAAGAGACAAACAT
261 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
*
800810 TGATTCTATTAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
326 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
*
800875 CCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
391 CCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
*
800940 GAATCAACGCTTGTCTCATTTAAAGGTTAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
456 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
801005 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
521 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
*
801070 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCAAGAACTTAT
586 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
* *
801135 GCTTTTCAAAAATTATTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCGTGTATCC
651 GCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
*
801200 ATATGAGAAGACTATATTTATGGTGCCTAATCTCAAAAAGAATGGGGATTAGTATGAGTATTCAT
716 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
801265 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
781 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
* *
801330 CGGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTAA
846 CGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
801395 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
911 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
801437 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
* *
801502 CAATAACATCTATCCCAATGAGAAGAATGTGTTCATAGTGCCTAATCTCAAAAGGAATGAAGGTT
66 CAATAACATCTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
*
801567 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGAGAAGAAA
131 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGGGAAGAAA
*
801632 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGCATCCTTATGAGAAGACTATGTTTGTGGTGC
196 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
801697 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
261 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
801762 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
326 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
*
801827 CCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
391 CCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
* * *
801892 GAATCAACGTTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAAGAAAAAAAGGCGAAAAAAGGA
456 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
*
801957 TTTCCACACCAAGGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
521 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
802022 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
586 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
*
802087 GCTTTTCAAAAATTTCTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
651 GCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
* * *
802152 ATATGAAAAGACTATATTTATGGTTCCTATTCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
716 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
* *
802217 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATTAATAATAGTGGTAAGAAAAGCTTCTCTTG
781 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
*
802282 CGGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
846 CGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
802347 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
911 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
*
802389 AAGGGTCAAACTTTGATTTTTATCAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
* *
802454 CAATAACATCTATCCCAATGAAAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
66 CAATAACATCTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
*
802519 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGGAGACTTTACAAAAATTGGCGGGAAGAAA
131 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGGGAAGAAA
802584 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
196 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
* *
802649 CTAATCCTAAAATGAATGGGGATTAGTATAGGTATTCATGTTTGTCTCATTTAAGAGACAAACAT
261 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
802714 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
326 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
*
802779 CCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
391 CCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
*
802844 GAATCAACGCTTGTCTCATTTAAAGGTTAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
456 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
802909 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
521 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
*
802974 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCAAGAACTTAT
586 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
* *
803039 GCTTTTCAAAAATTATTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCGTGTATCC
651 GCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
*
803104 ATATGAGAAGACTATATTTATGGTGCCTAATCTCAAAAAGAATGGGGATTAGTATGAGTATTCAT
716 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
803169 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
781 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
*
803234 CGGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
846 CGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
803299 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
911 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
*
803341 AAGGGTCAAACTTTGATTTTTATGAAAATTGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
*
803406 CAATAACATCTATCCCAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
66 CAATAACATCTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
*
803471 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGGAGACTTTACAAAAATTGGCGGGAAGAAA
131 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGGGAAGAAA
*
803536 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGCATCCTTATGAGAAGACTATGTTTGTGGTGC
196 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
803601 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
261 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
803666 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
326 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
* **
803731 CCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCTTTTCCCGATAAGAATGGAGACTTTTACAA
391 CCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
*
803796 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAAGA
456 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
803861 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
521 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
* *
803926 AATTGCAAAATAACTGGAGATCCTTACTAGAATCCATGTTTATCTCATATAAGGCATGAACTTAT
586 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
803991 GCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
651 GCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
* *
804056 ATATGAGAAGACTATATTTATGGTGCCTAGTCTCGAAAAGAATAGGGATTAGTATGAGTATTCAT
716 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
* *
804121 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAATGGTAATAAAAGCTTCTCTTG
781 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
*
804186 CGGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
846 CGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
804251 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
911 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
*
804293 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCGTGCCAAAAAAACCAT
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
*
804358 CAATAACATCTATCCCAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
66 CAATAACATCTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
* * *
804423 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGGAGACTGTACAAAAATTGGCGGGAAAAAA
131 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGGGAAGAAA
*
804488 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGCATCCTTATGAGAAGACTATGTTTGTGGTGC
196 GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
*
804553 CTAATCCTAAAGTGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
261 CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
804618 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
326 TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
* **
804683 CCTATGGAAGGGAA--TG----TGTTTTTGGTTCCCATTCTTGATAAGAATGGAGACTTTTACAA
391 CCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
*
804742 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGAAAAAAAAGGA
456 GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
* * *
804807 TTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAATAAGGAGAATATGTTTAAAGTGTCC
521 TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
* * * * *
804872 AATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTTTACCTCATTTAAGGCATTAACTTAG
586 AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
* *
804937 GCTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCC
651 GCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
*
805002 AAATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
716 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
* * *
805067 ATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTG
781 ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
** * * * * ** **
805131 CAACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCC-ATTCCCG
846 CGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATT-TTG
* * * * * * *
805195 ATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTT
910 AAAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
* * * * * * ** *
805238 AAAGGTCAAACTTTGATTTTAAGGAAAAAAAGG-AAAAAAAAGGATTTCCACACCGAAGAAAACC
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAA-GATTTCCATGCC-AAAAAAACC
* * * * * **
805302 ATCAATATCAT-TAATCCTAATAAGGAGAATGTGTTTAAAGTGTCC-AAT-TGCATAATAAATGA
64 ATCAATAACATCT-ATCCTAATGAGAAGAATGTGTTTATAGTG-CCTAATCT-CAAAAGGAATGA
* ** * * * ** * * * *
805364 AGATCCTTACTAGAATCCAT-GTTTACCTCATTT-AAGGCATGAACTTAGGCTTTTCAAAAATTA
126 AGGTTATCATTCGAATCC-TGGTTTGTCTC-TTTCGAGGCATG-A---AGACTTTACAAAAATTG
* * * * * * * *
805427 GTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTAT
185 GCGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAT
* * * * *
805492 ATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTTA
250 GTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTA
*
805556 AGAGACAAACATTGATTCTATCAATAACAGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATT
314 AGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATT
*
805621 AATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATTCTCGATAAGAATGG
379 AATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGG
*
805680 AGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACATTGATTTTAAGGAAAAAAAG
444 AGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAG
* *
805745 GTAAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCACTAATCCTAATAGGGAGAATGT
509 G-CAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGT
805810 GTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAA
573 GTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAA
805875 GGCATGAACTTATGCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCA
638 GGCATGAACTTATGCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCA
805940 ATACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAG
703 ATACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAG
* * *
806005 TATGAGTATTCATATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGA
768 TATGAGTATTCATATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGA
** * * * *
806069 AAAGCTTCTCTTGCAACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGG
833 AAAGCTTCTCTTGCGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGG
** ** * * * * * * *
806134 TTCCC-ATTCCCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTT
898 CACCCAATT-TTGAAAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
* * * * * * ** *
806189 AAAGGTCAAACTTTGATTTTAAGGAAAAAAAGG-AAAAAAAAGGATTTCCACACCGAAGAAAACC
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAA-GATTTCCATGCC-AAAAAAACC
* * * * * **
806253 ATCAATATCAT-TAATCCTAATAAGGAGAATGTGTTTAAAGTGTCC-AAT-TGCATAATAAATGA
64 ATCAATAACATCT-ATCCTAATGAGAAGAATGTGTTTATAGTG-CCTAATCT-CAAAAGGAATGA
* ** * * * ** * * * *
806315 AGATCCTTACTAGAATCCAT-GTTTACCTCATTT-AAGGCATGAACTTAGGCTTTTCAAAAATTA
126 AGGTTATCATTCGAATCC-TGGTTTGTCTC-TTTCGAGGCATG-A---AGACTTTACAAAAATTG
* * * * * * * *
806378 GTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTAT
185 GCGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAT
* * * * *
806443 ATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTTA
250 GTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTA
*
806507 AGAGACAAACATTGATTCTATCAATAACAGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATT
314 AGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATT
*
806572 AATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATTCTCGATAAGAATGG
379 AATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGG
*
806631 AGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACATTGATTTTAAGGAAAAAAAG
444 AGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAG
* *
806696 GTAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCACTAATCCTAATAGGGAGAATGTG
509 GCAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTG
806761 TTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAG
574 TTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAG
806826 GCATGAACTTATGCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAA
639 GCATGAACTTATGCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAA
806891 TACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGT
704 TACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGT
* * *
806956 ATGAGTATTCATATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAA
769 ATGAGTATTCATATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAA
** * * * * *
807020 AAGCTTCTCTTGCAACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGT
834 AAGCTTCTCTTGCGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGGC
* ** * * * * * * *
807085 TCCC-ATTCCCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTT
899 ACCCAATT-TTGAAAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
* * * * * * ** *
807139 AAAGGTCAAACTTTGATTTTAAGGAAAAAAAGG-AAAAAAAAGGATTTCCACACCGAAGAAAACC
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAA-GATTTCCATGCC-AAAAAAACC
* * * * * **
807203 ATCAATATCAT-TAATCCTAATAAGGAGAATGTGTTTAAAGTGTCC-AAT-TGCATAATAAATGA
64 ATCAATAACATCT-ATCCTAATGAGAAGAATGTGTTTATAGTG-CCTAATCT-CAAAAGGAATGA
* ** * * * ** ** * * *
807265 AGATCCTTACTAGAATCCAT-GTTTACCTCTTTTAAGGCATGAACTTAGGCTTTTCAAAAATTAG
126 AGGTTATCATTCGAATCC-TGGTTTGTCTCTTTCGAGGCATG-A---AGACTTTACAAAAATTGG
* * * * * * * * *
807329 TGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTATA
186 CGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATG
* * * *
807394 TTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTTAA
251 TTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAA
*
807458 GAGACAAACATTGATTCTATCAATAACAGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTA
315 GAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTA
*
807523 ATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATTCTCGATAAGAATGGA
380 ATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGA
*
807582 GACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACATTGATTTTAAGGAAAAAAAGG
445 GACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGG
* *
807647 TAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCACTAATCCTAATAGGGAGAATGTGT
510 CAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGT
807712 TTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGG
575 TTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGG
807777 CATGAACTTATGCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAAT
640 CATGAACTTATGCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAAT
807842 ACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTA
705 ACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTA
* * *
807907 TGAGTATTCATATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAA
770 TGAGTATTCATATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAA
* * * *
807971 AGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTT
835 AGCTTCTCTTGCGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAA--TGTA--T--TT
*** ** * * * * * * *
808036 TTGTTTCCC-ATTCCCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTT
894 TTGGCACCCAATT-TTGAAAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
* * * * * * ** *
808095 AAAGGTCAAACTTTGATTTTAAGGAAAAAAAGG-AAAAAAAAGGATTTCCACACCGAAGAAAACC
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAA-GATTTCCATGCC-AAAAAAACC
* * * * * **
808159 ATCAATATCAT-TAATCCTAATAAGGAGAATGTGTTTAAAGTGTCC-AAT-TGCATAATAAATGA
64 ATCAATAACATCT-ATCCTAATGAGAAGAATGTGTTTATAGTG-CCTAATCT-CAAAAGGAATGA
* ** * * * ** * * * *
808221 AGATCCTTACTAGAATCCAT-GTTTACCTCATTT-AAGGCATGAACTTAGGCTTTTCAAAAATTA
126 AGGTTATCATTCGAATCC-TGGTTTGTCTC-TTTCGAGGCATG-A---AGACTTTACAAAAATTG
* * * * * * * *
808284 GTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTAT
185 GCGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAT
* * * * *
808349 ATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTTA
250 GTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTA
* * ** * *
808413 AGACACAAACTTTGATTCTATCAATAATAGTGGCAAGAAAAGCTTCTCTTGCGGCACCAAAGCAT
314 AGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTGCGACACCAAAGCAT
* * * * ** * ** * *
808478 CAATATGATGTATCCTAATGAAGGGAA--TGTA----TTTTTGGCACCTAATT-TTGAAAAGATT
378 TAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCC-CATTCCCGATAAGAAT
* * * *
808536 GGAGACTATTACGAGAATTAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAA
442 GGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAA
* * *
808601 AGGAAAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAATAAGGAGAATG
507 AGGCAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATG
* * *
808666 TGTTTAAAGTGTCCAATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTTTACCTCATTTA
572 TGTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTA
* * * *
808731 AGGCATGAACTTAGGCTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGTAAAACCAAAGTATC
637 AGGCATGAACTTATGCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATC
*
808796 AATACCATGTATCCATATGAGGAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTA
702 AATACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTA
* *
808861 GTATGAGTATTCATATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGT-AG
767 GTATGAGTATTCATATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAG
** * * * *
808925 AAAAGCTTCTCTTGCAACACCAAAGCATTAATGTCATGTATCCTAAAGAAGGGAATGTGTTTTTG
832 AAAAGCTTCTCTTGCGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTG
** ** * * * * * * *
808990 GTTCCC-ATTCCCGATAAGAATGGAGACTTTTACAAGAATCAACAG-TTGTCTCATTT
897 GCACCCAATT-TTGAAAAGATTGGAGACTATTACGAGAATCAA-TGCTTGTCTTATCT
* * * * * * ** *
809046 AAAGGTCAAACTTTGATTTTAAGGAAAAAAAGG-AAAAAAAAGGATTTCCACACCGAAGAAAACC
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAA-GATTTCCATGCC-AAAAAAACC
* * * * * * **
809110 ATCAATATCAT-TAATCCTAATAAGGAGAATGTGTTTAAAGTGCCCAAT-TGCATAATAAATGAA
64 ATCAATAACATCT-ATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCT-CAAAAGGAATGAA
* * * * ** * * *
809173 GATCT-TTACTAGAATCCAT-GTTTACCTCATTT-AAGGCATGAACTTATGCTTTTCAAAAATT-
127 GGT-TATCATTCGAATCC-TGGTTTGTCTC-TTTCGAGGCATGAA--GA--CTTTACAAAAATTG
* * * * * * * *
809234 ACTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTA
185 GC-GGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTA
* * * * *
809299 TATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
249 TGTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTT
*
809363 AAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTACGACACCAAAGCAT
313 AAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCAT
809428 TAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATG
378 TAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATG
*
809493 GAGACTTTTACAAGAATCAACGCTTGTCTCCTTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAA
443 GAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAA
* *
809558 GGCAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAAGAAGGAGAATGT
508 GGCAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGT
* * *
809623 GTTTAAAGTCTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATATTTGTCTCATTTAA
573 GTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAA
* * *
809688 GGCATGAACTTAGGCTTTTCAAAAATTAGTGGGAAGAAAGTGATTTTTGCAAAACCAAAGTATCA
638 GGCATGAACTTATGCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCA
* * *
809753 ATACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAATGAAT-GGAAATAG
703 ATACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAG
* *
809817 TATGAGTATTCATATTTGTCCTATTTAAGAGACAAACTTTGATTCTATCAAGAACAGTGGTAAGA
768 TATGAGTATTCATATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGA
* *
809882 AAAGCTTCTCTTGCGGCACCAAAGCATTAATATCATGTATCCTAATGAAGGGAAAGTATTTTTGG
833 AAAGCTTCTCTTGCGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGG
* *
809947 CACCCAATTTTGAAAAGATTGGAGACTATTATGAGAATCAATGCTTGTCTTATTT
898 CACCCAATTTTGAAAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
*
810002 AAAGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
1 AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
* *
810067 CAATAACATTTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTC
66 CAATAACATCTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
* * * *
810132 ACCGTTCGAATCTTGGTTTGTCTCTTTCGAGGCATGGAGACTTTACAAAAATTGGCGGGAA-AAC
131 ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGGGAAGAA-
810196 AGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTG
195 AGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTG
* * *
810261 CCTAATCCTGAAATGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACT
260 CCTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACA
* * *
810326 TTGATTCTATCAATAATGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTA
325 TTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTA
**
810391 TCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATTCTTGATAAGAATGGAGACTTTTACA
390 TCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACA
* *
810450 AGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTTAGGAAAAAAAGGCAAAGAAAA-
455 AGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAA-AAAAG
* * *
810514 GATTTCCACACCAAATAAAACCATAAATATTATTAATCCTA
519 GATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTA
810555 GTGGGAAGAA
Statistics
Matches: 10567, Mismatches: 400, Indels: 117
0.95 0.04 0.01
Matches are distributed among these distances:
944 10 0.00
945 273 0.03
946 475 0.04
947 7 0.00
949 5 0.00
950 1689 0.16
951 1535 0.15
952 5044 0.48
953 2 0.00
954 5 0.00
955 152 0.01
956 859 0.08
957 508 0.05
958 3 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (952 bp):
AAGGGTCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAAAAACCAT
CAATAACATCTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCTCAAAAGGAATGAAGGTT
ATCATTCGAATCCTGGTTTGTCTCTTTCGAGGCATGAAGACTTTACAAAAATTGGCGGGAAGAAA
GCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGC
CTAATCCTAAAATGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACAT
TGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCGACACCAAAGCATTAATGTCATGTAT
CCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAA
GAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAAAAAGGA
TTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAGGGAGAATGTGTTTAAAGTGTCC
AATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTCATTTAAGGCATGAACTTAT
GCTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCC
ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
ATTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTG
CGGCACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATTTTGA
AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCT
Found at i:805097 original size:475 final size:474
Alignment explanation
Indices: 798751--810554 Score: 15884
Period size: 475 Copynumber: 24.8 Consensus size: 474
798741 GGCATGGAGA
* * * * * * * * *
798751 CTTTACAAAAATTGGTGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCT
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* * * *
798816 TATGAGAAGACTATGTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTATGGGTATTCAT
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGAGTATTCAT
*
798880 GTTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
130 ATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
798945 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATT
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATT
* *
799010 CCCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTATCTCATTTAAAGGTCAAACTTTGATT
254 CTCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATT
*
799075 TTAAGGAAAAAAAGGCAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTA
319 TTAAGGAAAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTA
* * * *
799140 ATAGGGAGAATGTGTTTAAAGTGTCCAATTGAAAAATAAATGGAGATCCTTACTAGAATACATGT
383 ATAAGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGT
*
799205 TTATCTCATTTAAGGCATGAACTTATG
448 TTATCTCATTTAAGGCATGAACTTAGG
* * * *
799232 CTTTTCAAAAATTACTAGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATATCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
*
799297 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTATTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
* * * *
799362 TTTATCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTGC
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTGC
* * * * * * * ** **
799427 GGCACCAAAGTATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATT-TTAA
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCC-ATTCTCGA
* * * * * * * * * *
799491 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCTAAGGGTCAAACTTTGATTTTTAT
259 TAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAG
* * * ** * * * *
799556 GAAAATAGGGCAAAGAAAA-GATTTCCATGCCAAAAAAACCATCAATAACATCT-ATCCCAATGA
324 GAAAAAAAGG-AAAAAAAAGGATTTCCACACCAAGAAAACCATCAATATCAT-TAATCCTAATAA
* * * ** * ** * * *
799619 GAAGAATGTGTTCATAGTG-CCTAATCT-CAAAAGGAATGAAGGTTATCATTCGAATCC-TGGTT
387 GGAGAATGTGTTTAAAGTGTCC-AAT-TGCAAAATAAATGAAGATCCTTACTAGAATCCAT-GTT
* *
799681 TGTCTC-TTTCAAGGCATG-A---AGA
449 TATCTCATTT-AAGGCATGAACTTAGG
* * * * * * * * * * * *
799703 CTTTACAAAAATTGGCGAGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGCATCCT
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* * * *
799768 TATGAGAAGACTATGTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTATGGGTATTCAT
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGAGTATTCAT
*
799832 GTTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
130 ATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
*
799897 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATT
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATT
*
799962 CCCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATT
254 CTCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATT
* *
800027 TTAAAGAAAAAAAGGCAAAAAAAGGATTTCCACACCAAGGAAAACCATCAATATCATTAATCCTA
319 TTAAGGAAAAAAAGGAAAAAAAAGGATTTCCACACCAA-GAAAACCATCAATATCATTAATCCTA
* *
800092 ATAGGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGT
383 ATAAGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGT
*
800157 TTATCTCATTTAAGGCATGAACTTATG
448 TTATCTCATTTAAGGCATGAACTTAGG
** *
800184 CTTTTCAAAAATTTCTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* * *
800249 TATGAAAAGACTATATTTATGGTTCCTATTCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
* * ** *
800314 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATTAATAATAGTGGTAAGAAAAGCTTCTCTTGC
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTGC
* * * * * * ** *
800379 GGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATT-TTGA
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCC-ATTCTCGA
* * * * * * * * * *
800443 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCTAAGGGTCAAACTTTGATTTTTAT
259 TAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAG
* * * * *** * * *
800508 CAAAATAGGGCAAAGAAAA-GATTTCCGTGCCAAAAAAACCATCAATAACATCT-ATCCCAATGA
324 GAAAAAAAGG-AAAAAAAAGGATTTCCACACCAAGAAAACCATCAATATCAT-TAATCCTAAT-A
* * ** * ** * * *
800571 A-AAGAATGTGTTTATAGTG-CCTAATCT-CAAAAGGAATGAAGGTTATCATTCGAATCC-TGGT
386 AGGAGAATGTGTTTAAAGTGTCC-AAT-TGCAAAATAAATGAAGATCCTTACTAGAATCCAT-GT
* * * *
800632 TTGTCTC-TTTCGAGGCATG----GAGA
448 TTATCTCATTT-AAGGCATGAACTTAGG
* * * * * * * * * *
800655 CTTTACAAAAATTGGCGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCT
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* * *
800720 TATGAGAAGACTATGTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTAT-AGGTATTCA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGA-GTATTCA
* * *
800783 TGTTTGTCTCATTTAAGAGACAAACATTGATTCTATTAATAACGGTGGGAGAAAAGCTTCTCTTG
129 TATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTG
*
800848 CGACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCAT
194 CGACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCAT
* *
800913 TCCCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTTAAACTTTGAT
253 TCTCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGAT
*
800978 TTTAAGGAAAAAAAGGCAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCT
318 TTTAAGGAAAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCT
* *
801043 AATAGGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATG
382 AATAAGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATG
* *
801108 TTTATCTCATTTAAGGCAAGAACTTATG
447 TTTATCTCATTTAAGGCATGAACTTAGG
* * *
801136 CTTTTCAAAAATTATTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCGTGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
*
801201 TATGAGAAGACTATATTTATGGTGCCTAATCTCAAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
* * *
801266 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTGC
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTGC
* * * * * * ** **
801331 GGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATT-TTAA
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCC-ATTCTCGA
* * * * * * * * * *
801395 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCTAAGGGTCAAACTTTGATTTTTAT
259 TAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAG
* * * ** * * * *
801460 GAAAATAGGGCAAAGAAAA-GATTTCCATGCCAAAAAAACCATCAATAACATCT-ATCCCAATGA
324 GAAAAAAAGG-AAAAAAAAGGATTTCCACACCAAGAAAACCATCAATATCAT-TAATCCTAATAA
* * * ** * ** * * *
801523 GAAGAATGTGTTCATAGTG-CCTAATCT-CAAAAGGAATGAAGGTTATCATTCGAATCC-TGGTT
387 GGAGAATGTGTTTAAAGTGTCC-AAT-TGCAAAATAAATGAAGATCCTTACTAGAATCCAT-GTT
* * *
801585 TGTCTC-TTTCGAGGCATG-A---AGA
449 TATCTCATTT-AAGGCATGAACTTAGG
* * * * * * * * * * * *
801607 CTTTACAAAAATTGGCGAGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGCATCCT
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* * * *
801672 TATGAGAAGACTATGTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTATGGGTATTCAT
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGAGTATTCAT
*
801736 GTTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
130 ATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
*
801801 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCATT
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATT
* *
801866 CCCGATAAGAATGGAGACTTTTACAAGAATCAACGTTTGTCTCATTTAAAGGTCAAACTTTGATT
254 CTCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATT
* **
801931 TTAAAGAAAAAAAGGCGAAAAAAGGATTTCCACACCAAGGAAAACCATCAATATCATTAATCCTA
319 TTAAGGAAAAAAAGGAAAAAAAAGGATTTCCACACCAA-GAAAACCATCAATATCATTAATCCTA
* *
801996 ATAGGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGT
383 ATAAGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGT
*
802061 TTATCTCATTTAAGGCATGAACTTATG
448 TTATCTCATTTAAGGCATGAACTTAGG
** *
802088 CTTTTCAAAAATTTCTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* * *
802153 TATGAAAAGACTATATTTATGGTTCCTATTCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
* * ** *
802218 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATTAATAATAGTGGTAAGAAAAGCTTCTCTTGC
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTGC
* * * * * * ** *
802283 GGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATT-TTGA
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCC-ATTCTCGA
* * * * * * * * * *
802347 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCTAAGGGTCAAACTTTGATTTTTAT
259 TAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAG
* * * * ** * * *
802412 CAAAATAGGGCAAAGAAAA-GATTTCCATGCCAAAAAAACCATCAATAACATCT-ATCCCAATGA
324 GAAAAAAAGG-AAAAAAAAGGATTTCCACACCAAGAAAACCATCAATATCAT-TAATCCTAAT-A
* * ** * ** * * *
802475 A-AAGAATGTGTTTATAGTG-CCTAATCT-CAAAAGGAATGAAGGTTATCATTCGAATCC-TGGT
386 AGGAGAATGTGTTTAAAGTGTCC-AAT-TGCAAAATAAATGAAGATCCTTACTAGAATCCAT-GT
* * * *
802536 TTGTCTC-TTTCGAGGCATG----GAGA
448 TTATCTCATTT-AAGGCATGAACTTAGG
* * * * * * * * * *
802559 CTTTACAAAAATTGGCGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCT
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* * *
802624 TATGAGAAGACTATGTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTAT-AGGTATTCA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGA-GTATTCA
* *
802687 TGTTTGTCTCATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTG
129 TATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTG
*
802752 CGACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCCAT
194 CGACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCAT
* *
802817 TCCCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTTAAACTTTGAT
253 TCTCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGAT
*
802882 TTTAAGGAAAAAAAGGCAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCT
318 TTTAAGGAAAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCT
* *
802947 AATAGGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATG
382 AATAAGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATG
* *
803012 TTTATCTCATTTAAGGCAAGAACTTATG
447 TTTATCTCATTTAAGGCATGAACTTAGG
* * *
803040 CTTTTCAAAAATTATTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCGTGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
*
803105 TATGAGAAGACTATATTTATGGTGCCTAATCTCAAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
* * *
803170 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAGTGGTAAGAAAAGCTTCTCTTGC
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTGC
* * * * * * ** *
803235 GGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATT-TTGA
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCC-ATTCTCGA
* * * * * * * * * *
803299 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCTAAGGGTCAAACTTTGATTTTTAT
259 TAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAG
*** * ** * * * *
803364 GAAAATTGGGCAAAGAAAA-GATTTCCATGCCAAAAAAACCATCAATAACATCT-ATCCCAATGA
324 GAAAAAAAGG-AAAAAAAAGGATTTCCACACCAAGAAAACCATCAATATCAT-TAATCCTAATAA
* * ** * ** * * *
803427 GAAGAATGTGTTTATAGTG-CCTAATCT-CAAAAGGAATGAAGGTTATCATTCGAATCC-TGGTT
387 GGAGAATGTGTTTAAAGTGTCC-AAT-TGCAAAATAAATGAAGATCCTTACTAGAATCCAT-GTT
* * * *
803489 TGTCTC-TTTCGAGGCATG----GAGA
449 TATCTCATTT-AAGGCATGAACTTAGG
* * * * * * * * * * *
803511 CTTTACAAAAATTGGCGGGAAGAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGCATCCT
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* * * *
803576 TATGAGAAGACTATGTTTGTGGTGCCTAATC-CTAAAATGAATGGGGATTAGTATGGGTATTCAT
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAA-GAATGGGGATTAGTATGAGTATTCAT
*
803640 GTTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
130 ATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
* **
803705 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGGTTCCTTTT
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATT
*
803770 CCCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATT
254 CTCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATT
803835 TTAAGGAAAAAAAGGCAAAAAAAA-GATTTCCACACCAAAGAAAACCATCAATATCATTAATCCT
319 TTAAGGAAAAAAAGG-AAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCT
* * *
803899 AATAGGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAACTGGAGATCCTTACTAGAATCCATG
382 AATAAGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATG
* *
803964 TTTATCTCATATAAGGCATGAACTTATG
447 TTTATCTCATTTAAGGCATGAACTTAGG
* *
803992 CTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* *
804057 TATGAGAAGACTATATTTATGGTGCCTAGTCTCGAAAAGAATAGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
* ** * *
804122 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACAATGGTAATAAAAGCTTCTCTTGC
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTGC
* * * * * * ** *
804187 GGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCCAATT-TTGA
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCC-ATTCTCGA
* * * * * * * * * *
804251 AAAGATTGGAGACTATTACGAGAATCAATGCTTGTCTTATCTAAGGGTCAAACTTTGATTTTTAT
259 TAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAG
* * * *** * * * *
804316 GAAAATAGGGCAAAGAAAA-GATTTCCGTGCCAAAAAAACCATCAATAACATCT-ATCCCAATGA
324 GAAAAAAAGG-AAAAAAAAGGATTTCCACACCAAGAAAACCATCAATATCAT-TAATCCTAATAA
* * ** * ** * * *
804379 GAAGAATGTGTTTATAGTG-CCTAATCT-CAAAAGGAATGAAGGTTATCATTCGAATCC-TGGTT
387 GGAGAATGTGTTTAAAGTGTCC-AAT-TGCAAAATAAATGAAGATCCTTACTAGAATCCAT-GTT
* * * *
804441 TGTCTC-TTTCGAGGCATG----GAGA
449 TATCTCATTT-AAGGCATGAACTTAGG
* * * * * * * * * * * * *
804463 CTGTACAAAAATTGGCGGGAAAAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGCATCCT
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
* * * * *
804528 TATGAGAAGACTATGTTTGTGGTGCCTAATC-CTAAAGTGAATGGGGATTAGTATGGGTATTCAT
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAA-AGAATGGGGATTAGTATGAGTATTCAT
*
804592 GTTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
130 ATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGC
* *
804657 GACACCAAAGCATTAATGTCATGTATCCTATGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGAT
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGAT
804722 AAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGG
260 AAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGG
804787 AAAAAAAGGAAAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAATAAGG
325 AAAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAATAAGG
* * *
804852 AGAATATGTTTAAAGTGTCCAATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTTTACCT
389 AGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATCT
*
804917 CATTTAAGGCATTAACTTAGG
454 CATTTAAGGCATGAACTTAGG
804938 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
*
805003 AATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
*
805068 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCA
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
*
805133 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCCCGATA
196 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
805198 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
261 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
805263 AAAAAAGGAAAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAATAAGGA
326 AAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAATAAGGA
* *
805328 GAATGTGTTTAAAGTGTCCAATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTTTACCTC
390 GAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATCTC
805393 ATTTAAGGCATGAACTTAGG
455 ATTTAAGGCATGAACTTAGG
805413 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
805478 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
*
805543 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACAGTGGGAGAAAAGCTTCTCTTGCG
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
805608 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
196 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
*
805673 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACATTGATTTTAAGGA
261 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
* *
805738 AAAAAAGGTAAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCACTAATCCTAATAGGG
326 AAAAAAGG-AAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAATAAGG
*
805803 AGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCT
389 AGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATCT
*
805868 CATTTAAGGCATGAACTTATG
454 CATTTAAGGCATGAACTTAGG
* *
805889 CTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
805954 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
*
806019 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCA
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
*
806084 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCCCGATA
196 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
806149 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
261 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
806214 AAAAAAGGAAAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAATAAGGA
326 AAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAATAAGGA
* *
806279 GAATGTGTTTAAAGTGTCCAATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTTTACCTC
390 GAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATCTC
806344 ATTTAAGGCATGAACTTAGG
455 ATTTAAGGCATGAACTTAGG
806364 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
806429 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
*
806494 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACAGTGGGAGAAAAGCTTCTCTTGCG
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
806559 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
196 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
*
806624 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACATTGATTTTAAGGA
261 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
* * *
806689 AAAAAAGGTAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCACTAATCCTAATAGGGA
326 AAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAATAAGGA
*
806754 GAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTC
390 GAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATCTC
*
806819 ATTTAAGGCATGAACTTATG
455 ATTTAAGGCATGAACTTAGG
* *
806839 CTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
806904 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
*
806969 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCA
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
*
807034 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCCCGATA
196 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
807099 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
261 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
807164 AAAAAAGGAAAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAATAAGGA
326 AAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAATAAGGA
* *
807229 GAATGTGTTTAAAGTGTCCAATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTTTACCTC
390 GAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATCTC
*
807294 TTTTAAGGCATGAACTTAGG
455 ATTTAAGGCATGAACTTAGG
807314 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
807379 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
*
807444 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACAGTGGGAGAAAAGCTTCTCTTGCG
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
807509 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
196 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
*
807574 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACATTGATTTTAAGGA
261 AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
* * *
807639 AAAAAAGGTAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCACTAATCCTAATAGGGA
326 AAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAATAAGGA
*
807704 GAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATGTTTATCTC
390 GAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATCTC
*
807769 ATTTAAGGCATGAACTTATG
455 ATTTAAGGCATGAACTTAGG
* *
807789 CTTTTCAAAAATTACTGGGAAGAAAGTGTTTTTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
807854 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
807919 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
* *
807984 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGCTTTTGTTTCCCATTC
196 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATTC
*
808049 CCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTT
255 TCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTT
808114 TAAGGAAAAAAAGGAAAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAA
320 TAAGGAAAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAA
*
808179 TAAGGAGAATGTGTTTAAAGTGTCCAATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTT
384 TAAGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTT
*
808244 TACCTCATTTAAGGCATGAACTTAGG
449 TATCTCATTTAAGGCATGAACTTAGG
808270 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
808335 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
* * ** *
808400 TTTGTCTTATTTAAGACACAAACTTTGATTCTATCAATAATAGTGGCAAGAAAAGCTTCTCTTGC
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTGC
* * * * * * ** * *
808465 GGCACCAAAGCATCAATATGATGTATCCTAATGAAGGGAATGTATTTTTGGCACCTAATT-TTGA
195 GACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCC-CATTCTCGA
* * * * * *
808529 AAAGATTGGAGACTATTACGAGAATTAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAG
259 TAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAG
808594 GAAAAAAAGGAAAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAATAAG
324 GAAAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAATAAG
* *
808659 GAGAATGTGTTTAAAGTGTCCAATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTTTACC
388 GAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATC
808724 TCATTTAAGGCATGAACTTAGG
453 TCATTTAAGGCATGAACTTAGG
*
808746 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGTAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
*
808811 TATGAGGAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
* *
808876 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGTAGAAAAGCTTCTCTTGCA
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
* *
808941 ACACCAAAGCATTAATGTCATGTATCCTAAAGAAGGGAATGTGTTTTTGGTTCCCATTCCCGATA
196 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
809006 AGAATGGAGACTTTTACAAGAATCAACAG-TTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGG
261 AGAATGGAGACTTTTACAAGAATCAAC-GCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGG
809070 AAAAAAAGGAAAAAAAAGGATTTCCACACCGAAGAAAACCATCAATATCATTAATCCTAATAAGG
325 AAAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAATAAGG
* * * *
809135 AGAATGTGTTTAAAGTGCCCAATTGCATAATAAATGAAGATCTTTACTAGAATCCATGTTTACCT
389 AGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATCT
*
809200 CATTTAAGGCATGAACTTATG
454 CATTTAAGGCATGAACTTAGG
*
809221 CTTTTCAAAAATTACTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
1 CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
809286 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
66 TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
*
809351 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTACG
131 TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
809416 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTC
196 ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATTC
* *
809481 CCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCCTTTAAAGGTCAAACTTTGATTT
255 TCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTT
*
809546 TAAGGAAAAAAAGGCAAAAAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAA
320 TAAGGAAAAAAAGGAAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTAA
* * * *
809611 GAAGGAGAATGTGTTTAAAGTCTCCAATTGCAAAATAAATGGAGATCCTTACTAGAATCCATATT
384 TAAGGAGAATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTT
*
809676 TGTCTCATTTAAGGCATGAACTTAGG
449 TATCTCATTTAAGGCATGAACTTAGG
809702 CTTTTCAAAAATTAGTGGGAAGAAAGTGATTT-TTGCAAAACCAAAGTATCAATACCATGTATCC
1 CTTTTCAAAAATTAGTGGGAAGAAAGTG-TTTCTTGCAAAACCAAAGTATCAATACCATGTATCC
* * *
809766 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAATGAAT-GGAAATAGTATGAGTATTCAT
65 ATATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCAT
* * * * *
809830 ATTTGTCCTATTTAAGAGACAAACTTTGATTCTATCAAGAACAGTGGTAAGAAAAGCTTCTCTTG
130 ATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGG-GAGAAAAGCTTCTCTTG
* * * * * ** *
809895 CGGCACCAAAGCATTAATATCATGTATCCTAATGAAGGGAAAGTATTTTTGGCACCCAATT-TTG
194 CGACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCC-ATTCTCG
* * * ** * * *
809959 AAAAGATTGGAGACTATTATGAGAATCAATGCTTGTCTTATTTAAAGGTCAAACTTTGATTTTTA
258 ATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAA
* * * * ** * * * *
810024 TGAAAATAGGGCAAAGAAAA-GATTTCCATGCCAAAAAAACCATCAATAACATTTATCCTAATGA
323 GGAAAAAAAGG-AAAAAAAAGGATTTCCACACCAAGAAAACCATCAATATCATTAATCCTAATAA
* * ** * *
810088 GAAGAATGTGTTTATAGTG-CCTAATCT-CAAAAGGAATGAAGGTCACCGTT-C--GAAT-CTTG
387 GGAGAATGTGTTTAAAGTGTCC-AAT-TGCAAAATAAATGAAGAT--CC-TTACTAGAATCCAT-
* * * *
810147 GTTTGTCTC-TTTCGAGGCATG----GAGA
446 GTTTATCTCATTT-AAGGCATGAACTTAGG
* * * * * * * * *
810172 CTTTACAAAAATTGGCGGGAA-AACAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCC
1 CTTTTCAAAAATTAGTGGGAAGAA-AGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCC
* * * *
810236 TTATGAGAAGACTATGTTTGTGGTGCCTAATC-CTGAAATGAATGGGGATTAGTATGAGTATTCA
65 ATATGAGAAGACTATATTTATGGTGCCTAATCTC-GAAAAGAATGGGGATTAGTATGAGTATTCA
* * * *
810300 TGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAATGGTGGAAGAAAAGCTTCTCTTG
129 TATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTG
* *
810365 CGACACCAAAGCATCAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGA
194 CGACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGA
* *
810430 TAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTTAG
259 TAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAG
* * * *
810495 GAAAAAAAGGCAAAGAAAA-GATTTCCACACCAAATAAAACCATAAATATTATTAATCCTA
324 GAAAAAAAGG-AAAAAAAAGGATTTCCACACC-AAGAAAACCATCAATATCATTAATCCTA
810555 GTGGGAAGAA
Statistics
Matches: 9955, Mismatches: 1164, Indels: 418
0.86 0.10 0.04
Matches are distributed among these distances:
469 18 0.00
470 675 0.07
471 1051 0.11
472 16 0.00
473 7 0.00
474 117 0.01
475 3617 0.36
476 1834 0.18
477 450 0.05
478 31 0.00
479 1 0.00
480 77 0.01
481 1664 0.17
482 397 0.04
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (474 bp):
CTTTTCAAAAATTAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCA
TATGAGAAGACTATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATA
TTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTGCG
ACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTCGATA
AGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGA
AAAAAAGGAAAAAAAAGGATTTCCACACCAAGAAAACCATCAATATCATTAATCCTAATAAGGAG
AATGTGTTTAAAGTGTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTATCTCA
TTTAAGGCATGAACTTAGG
Found at i:810885 original size:370 final size:369
Alignment explanation
Indices: 810188--810912 Score: 1026
Period size: 370 Copynumber: 2.0 Consensus size: 369
810178 AAAAATTGGC
* * * *
810188 GGGAAAACAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGT
1 GGGAAAACAGCGTTCCTTGCAAAACCAAAGCATCAATACCATGTATCCATATGAGAAGACTATGT
* * *
810253 TTGTGGTGCCTAATCCTGAAATGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGA
66 TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTGTGTCTTATTTAAGA
** *
810318 GACAAACTTTGATTCTATCAATAATGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCAAT
131 GACAAACTTTGATTCTATCAATAACAGTGGAAGAAAAGCTTCTCTAGCGACACCAAAGCATCAAT
* * * * * *
810383 GTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGATAAGAATGGAGACTTTTA
196 GTCATGTATCCTAAGGAAGGGAATGTATTTTTGGCTCCCAATATTGAAAAGAATGGAGACTATTA
* **
810448 CAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTTAGGAAAAAAAGGCAAAGAAA
261 CAAGAATCAATGCTTCTCTCATTTAAAGGTCAAACTTTGATTTTTAACAAAAAAAGGCAAAGAAA
*
810513 AGATTTCCACACCAAATAAAACCATAAATATTATTAATCCTAGT
326 AGATTTCCACACCAAAGAAAACCATAAATATTATTAATCCTAGT
* * *
810557 GGGAAGAA-AGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGGGAAGACTATG
1 GGGAA-AACAGCGTTCCTTGCAAAACCAAAGCATCAATACCATGTATCCATATGAGAAGACTATG
* * *
810621 TTTATGGTGCCT-ATTCTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTGTGTCTTATTTAG
65 TTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTGTGTCTTATTTAA
* *
810685 GAGACAAACTTTGATTCTATCAATACCAGTGGTAA-AAGAAGCTTCTCTAGCGGCACCAAAGCAT
129 GAGACAAACTTTGATTCTATCAATAACAGTGG-AAGAA-AAGCTTCTCTAGCGACACCAAAGCAT
* * * *
810749 TAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCTCAATATTGAAAAGATTGGAGACT
192 CAATGTCATGTATCCTAAGGAAGGGAATGTATTTTTGGCTCCCAATATTGAAAAGAATGGAGACT
* * * *
810814 ATTACGAGAATCAATGCTTCTCTTATTTAAGGGTCAAACTTTGA-TTTTAACAAAAATAGGGCAA
257 ATTACAAGAATCAATGCTTCTCTCATTTAAAGGTCAAACTTTGATTTTTAACAAAAA-AAGGCAA
** *
810878 AGAAAAGATTTCCATGCCAAAGAAAACCATCAATA
321 AGAAAAGATTTCCACACCAAAGAAAACCATAAATA
810913 ACATCTATCC
Statistics
Matches: 312, Mismatches: 39, Indels: 9
0.87 0.11 0.03
Matches are distributed among these distances:
368 4 0.01
369 148 0.47
370 160 0.51
ACGTcount: A:0.35, C:0.15, G:0.19, T:0.30
Consensus pattern (369 bp):
GGGAAAACAGCGTTCCTTGCAAAACCAAAGCATCAATACCATGTATCCATATGAGAAGACTATGT
TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTGTGTCTTATTTAAGA
GACAAACTTTGATTCTATCAATAACAGTGGAAGAAAAGCTTCTCTAGCGACACCAAAGCATCAAT
GTCATGTATCCTAAGGAAGGGAATGTATTTTTGGCTCCCAATATTGAAAAGAATGGAGACTATTA
CAAGAATCAATGCTTCTCTCATTTAAAGGTCAAACTTTGATTTTTAACAAAAAAAGGCAAAGAAA
AGATTTCCACACCAAAGAAAACCATAAATATTATTAATCCTAGT
Found at i:812001 original size:476 final size:473
Alignment explanation
Indices: 810553--813290 Score: 3408
Period size: 476 Copynumber: 5.8 Consensus size: 473
810543 TTATTAATCC
*
810553 TAGTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGGGAAGACT
1 TAGTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACT
* * * * *
810618 ATGTTTATGGTGCCTATTCTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTGTGTCTTATTT
66 ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
* * * * * *
810683 AGGAGACAAACTTTGATTCTATCAATACCAGTGGTAAAAGAAGCTTCTCTAGCGGCACCAAAGCA
131 AAGAGACAAACTTTGATTCTATCAATAACGGTGGTAGAA-AAGCTTCTCTTGCGACACCAAAGCA
* * * * * *
810748 TTAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCTCAATATTGAAAAGATTGGAGAC
195 TTAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCATTCTTGATAAGAATGGAGAC
* * * * * * *
810813 TATTACGAGAATCAATGCTTCTCTTATTTAAGGGTCAAACTTTGATTTTAA-CAAAAATAGGGCA
260 TTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAA-AAGGCA
** * * *
810877 AAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATCT-ATCCTAATGAGAAGAATGTGTT
324 AAGAAAAGATTTCCACACCAAAGAAAACCATCAATATCAT-TAATCCTAATAAGGAGAATGTGTT
** * * * * *
810941 TGTAGTGCCTAATCTCAAAACAAATGAAGGTCACCGTT-C--GAATCC-TGGTTTGTCTCTTTTG
388 TAAAGTGCCCAAT-TCAAAATAAATGAAGAT--CC-TTACTAGAATCCAT-GTTTGTCTCATTTA
*
811002 AGGCATGAACTTAGACTTTACAAAAAT
448 AGGCATGAACTTAG-CTTTTCAAAAAT
* * * * * * *
811029 TGGTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCAATATCGTCTATCCTTATGAGAAGACT
1 TAGTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACT
* * * * * * *
811094 ATGTTTGTGGTGCCTAATC-CTGAATA-AATGGGGACTAGTATGAGTTTTCATGTTTATCTTATT
66 ATATTTATGGTGCCTAATCTC-GAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATT
*
811157 TAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCA
130 TAAGAGACAAACTTTGATTCTATCAATAACGGTGGTAGAAAAGCTTCTCTTGCGACACCAAAGCA
* * *
811222 TCAATGTCATGTATCCTAATGAAGGGAATGTATGTTTGGTTCCCAATCTTGA-AA-AAGTTGGAG
195 TTAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCATTCTTGATAAGAA--TGGAG
* * * *
811285 ACTGTTACGAGAATCAA----TG---C--TT--AGGTTCAAACTTTGATTTTAAGGAAAATAGGG
258 ACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGG-TCAAACTTTGATTTTAAGGAAAAAAAGG
*****
811339 CAAAGAAAAGATTTTTGTGCCAAAGAAAACCATCAATATCATTAATCCTAATAAGGAGAATGTGT
322 CAAAGAAAAGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAAGGAGAATGTGT
* * **
811404 TTAAAGTGTCCAATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTTTACCTCATTTAAGG
387 TTAAAGTGCCCAATT-CAAAATAAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTAAGG
811469 CATGAACTTAGGCTTTTCAAAAAT
451 CATGAACTTA-GCTTTTCAAAAAT
* *
811493 TAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGGAGACT
1 TAGTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACT
811558 ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
66 ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
* *
811623 AAGAGACAAACATTGATTCTATCAATAACGGTGGTAGAAAAGCTTCTCTTGCAACACCAAAGCAT
131 AAGAGACAAACTTTGATTCTATCAATAACGGTGGTAGAAAAGCTTCTCTTGCGACACCAAAGCAT
* * **
811688 TAATGTCATGTATCCTAAAGAAGGGAATGTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACT
196 TAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCATTCTTGATAAGAATGGAGACT
* *
811753 TTTACAAGAATCAACAG-TTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGAAA
261 TTTACAAGAATCAA-TGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAA
* * * *
811817 AAAAAAGGATTTCCACACCGAAGAAAACCGTCAATTTCATTAATCCTAATAAGGAGAATGTGTTT
325 AGAAAA-GATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAAGGAGAATGTGTTT
* **
811882 AAAGTGCCCAATTGCATAATAAATGAAGATCCTTACTAGAATCCATGTTTACCTCATTTAAGGCA
389 AAAGTGCCCAATT-CAAAATAAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTAAGGCA
811947 TGAACTTATGCTTTTCAAAAAT
453 TGAACTTA-GCTTTTCAAAAAT
* * *
811969 TACTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCAAATGAGAAGACT
1 TAGTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACT
812034 ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
66 ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
* * *
812099 AAGAGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTACGACACCAAAGCAT
131 AAGAGACAAACTTTGATTCTATCAATAACGGTGGTAGAAAAGCTTCTCTTGCGACACCAAAGCAT
* **
812164 TAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATG
196 TAATGTCATGTATCCTAATGAAGGGAA--TGTA----TTTTTGGTTCCCATTCTTGATAAGAATG
* *
812229 GAGACTTTTACAAGAATCAACGCTTGTCTCCTTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAA
255 GAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAA
*
812294 GGCAAA-AAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAAGAAGGAGAATG
320 GGCAAAGAAAA-GATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAAGGAGAATG
* *
812358 TGTTTAAAGT-CTCCAATTTCAAAATAAATGGAGATCCTTACTAGAATCCATATTTGTCTCATTT
384 TGTTTAAAGTGC-CCAA-TTCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTT
812422 AAGGCATGAACTTAGGCTTTTCAAAAAT
447 AAGGCATGAACTTA-GCTTTTCAAAAAT
*
812450 TAGTGGGAAGAAAGTGATTT-TTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGAC
1 TAGTGGGAAGAAAGCG-TTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGAC
* * * *
812514 TATATTTATGGTGCCTAATCTCGAAATGAAT-GGAAATAGTATGAGTATTCATATTTGTCCTATT
65 TATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATT
* * *
812578 TAAGAGACAAACTTTGATTCTATCAAGAACAGTGGTAAGAAAAGCTTCTCTTGCGGCACCAAAGC
130 TAAGAGACAAACTTTGATTCTATCAATAACGGTGGT-AGAAAAGCTTCTCTTGCGACACCAAAGC
* * ** * *
812643 ATTAATATCATGTATCCTAATGAAGGGAAAGTATTTTTGGCACCCAATT-TTGAAAAGATTGGAG
194 ATTAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCC-ATTCTTGATAAGAATGGAG
* ** * * * * * *
812707 ACTATTATGAGAATCAATGCTTGTCTTATTTAAAGGTCAAACATTGATTTTTATGAAAATAGGGC
258 ACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGC
** * * * *
812772 AAAGAAAAGATTTCCATGCCAAA-AAAACCATCAATAACATTTATCCTAATGAGAAGAATGTGTT
323 AAAGAAAAGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAAGGAGAATGTGTT
* * ** * *
812836 TATAGTGCCTAATCTCAAAAGGAATGAAGGTCACCGTT-C--GAAT-CTTGGTTTGTCTC-TTTC
388 TAAAGTGCCCAAT-TCAAAATAAATGAAGAT--CC-TTACTAGAATCCAT-GTTTGTCTCATTT-
* * * *
812896 GAGGCATGGA--GA-CTTTACAAAAAT
447 AAGGCATGAACTTAGCTTTTCAAAAAT
* * * * * * * * *
812920 TGGCGGGAAAAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACT
1 TAGTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACT
* * * *
812985 ATGTTTGTGGTGCCTAATC-CTGAAATGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
66 ATATTTATGGTGCCTAATCTC-GAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATT
* *
813049 TAAGAGACAAACTTTGATTCTATCAATAATGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCA
130 TAAGAGACAAACTTTGATTCTATCAATAACGGTGGTAGAAAAGCTTCTCTTGCGACACCAAAGCA
* * *
813114 TCAATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGATAAGAATGGAGAC
195 TTAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCATTCTTGATAAGAATGGAGAC
* *
813179 TTTTACAAGAATCAATGCTTGTCTCATTGAAAGGTCAAACTTTGATTTTTAGGAAAAAAAGGCAA
260 TTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAA
* * *
813244 AGAAAAGATTTCCACACCAAATAAAACCATAAATATTATTAATCCTA
325 AGAAAAGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTA
813291 GTGGGAAGAA
Statistics
Matches: 1997, Mismatches: 212, Indels: 111
0.86 0.09 0.05
Matches are distributed among these distances:
461 2 0.00
462 3 0.00
463 4 0.00
464 218 0.11
465 169 0.08
466 2 0.00
467 2 0.00
469 8 0.00
470 245 0.12
471 82 0.04
472 3 0.00
473 8 0.00
474 170 0.09
475 193 0.10
476 441 0.22
477 2 0.00
478 3 0.00
479 3 0.00
480 63 0.03
481 277 0.14
482 99 0.05
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.31
Consensus pattern (473 bp):
TAGTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACT
ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
AAGAGACAAACTTTGATTCTATCAATAACGGTGGTAGAAAAGCTTCTCTTGCGACACCAAAGCAT
TAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCATTCTTGATAAGAATGGAGACT
TTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAA
GAAAAGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATAAGGAGAATGTGTTTAA
AGTGCCCAATTCAAAATAAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTAAGGCATGA
ACTTAGCTTTTCAAAAAT
Found at i:812516 original size:957 final size:944
Alignment explanation
Indices: 810553--813290 Score: 3808
Period size: 957 Copynumber: 2.9 Consensus size: 944
810543 TTATTAATCC
* *
810553 TAGTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGGGAAGACT
1 TAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACT
* * * * *
810618 ATGTTTATGGTGCCTATTCTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTGTGTCTTATTT
66 ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
* * * *
810683 AGGAGACAAACTTTGATTCTATCAATACCAGTGGTAAAAGAAGCTTCTCTAGCGGCACCAAAGCA
131 AAGAGACAAACTTTGATTCTATCAATAACAGTGGTAGAA-AAGCTTCTCTTGCGGCACCAAAGCA
* *
810748 TTAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCTCAATATTGAAAAGATTGGAGAC
195 TTAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTC-CCATTTTGAAAAGATTGGAGAC
* * *
810813 TATTACGAGAATCAATGCTTCTCTTATTTAAGGGTCAAACTTTGATTTTAACAAAAATAGGGCAA
259 TATTACGAGAATCAATGCTTGTCTTATTTAAAGGTCAAACTTTGATTTTAAGAAAAA-AGGGCAA
*
810878 AGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATCTATCCTAATGAGAAGAATGTGTTTG
323 AGAAAAGATTTCCATGCC-AAGAAAACCATCAATAACAT-TATCCTAATGAGAAGAATGTGTTTA
810943 TAGTGCCTAATCTCAAAACAAATGAAGGTCACCGTTCGAATCCTGGTTTGTCTCTTTTGAGGCAT
386 TAGTGCCTAATCTCAAAACAAATGAAGGT-ACCGTTCGAATCCTGGTTTGTCTC-TTTGAGGCAT
*
811008 GAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCAATATC
449 GAACTTAG-CTTTACAAAAATTGCTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCAATATC
* * *
811073 GTCTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAATA-AATGGGGACTAGTATGA
513 GTGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGA
* *
811137 GTTTTCATGTTTATCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCT
578 GTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCT
*
811202 TCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATG--TTTGGTTCC
643 TCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAGGAAGGGAATGTATGTTTTTGGTTCC
* * *
811265 CAATCTTGA-AA-AAGTTGGAGACTGTTACGAGAATCAA---TG----C-TT--AGGTTCAAACT
708 CATTCTTGATAAGAA--TGGAGACTTTTACAAGAATCAAGCTTGTCTCCTTTAAAGG-TCAAACT
* * *****
811318 TTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTTGTGCCAAAGAAAACCATCAATATCATTA
770 TTGATTTTAAGGAAAAAAAGGCAAAGAAAAGATTTCCACACCAAAGAAAACCATCAATATCATTA
* * *
811383 ATCCTAATAAGGAGAATGTGTTTAAAGTGTCCAATTGCATAATAAATGAAGATCCTTACTAGAAT
835 ATCCTAAGAAGGAGAATGTGTTTAAAGTCTCCAATTGCAAAATAAATGAAGATCCTTACTAGAAT
*
811448 CCATGTTTACCTCATTTAAGGCATGAACTTAGGCTTTTCAAAAAT
900 CCATATTTACCTCATTTAAGGCATGAACTTAGGCTTTTCAAAAAT
*
811493 TAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGGAGACT
1 TAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACT
811558 ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
66 ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
* * **
811623 AAGAGACAAACATTGATTCTATCAATAACGGTGGTAGAAAAGCTTCTCTTGCAACACCAAAGCAT
131 AAGAGACAAACTTTGATTCTATCAATAACAGTGGTAGAAAAGCTTCTCTTGCGGCACCAAAGCAT
* * * ** * *
811688 TAATGTCATGTATCCTAAAGAAGGGAATGTGTTTTTGGTTCCCATTCCCGATAAGAATGGAGACT
196 TAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCCCATT-TTGAAAAGATTGGAGACT
* * * * * *
811753 TTTACAAGAATCAACAG-TTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGAAA
260 ATTACGAGAATCAA-TGCTTGTCTTATTTAAAGGTCAAACTTTGATTTTAA-GAAAAAAGGGCAA
* ** * ** * *
811817 AAAAAAGGATTTCCACACCGAAGAAAACCGTCAATTTCATTAATCCTAATAAGGAGAATGTGTTT
323 AGAAAA-GATTTCCATGCC-AAGAAAACCATCAATAACATT-ATCCTAATGAGAAGAATGTGTTT
* * * * * ** *
811882 AAAGTGCCCAAT-TGCATAATAAATGAAGAT-CC-TTACTAGAATCCAT-GTTTACCTCATTTAA
385 ATAGTGCCTAATCT-CAAAACAAATGAAGGTACCGTT-C--GAATCC-TGGTTTGTCTC-TTTGA
* * * * *
811943 GGCATGAACTTATGCTTTTCAAAAATTACTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCA
444 GGCATGAACTTA-GCTTTACAAAAATTGCTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCA
* * ** * *
812008 ATACCATGTATCCAAATGAGAAGACTATATTTATGGTGCCTAAT-CTCGAAAAGAATGGGGATTA
508 ATATCGTGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCT-GAAAAGAATGGGGATTA
* * *
812072 GTATGAGTATTCATATTTGTCTTATTTAAGAGACAAACATTGATTCTATCAATAACGGTGGGAGA
572 GTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGA
* *
812137 AAAGCTTCTCTTACGACACCAAAGCATTAATGTCATGTATCCTAAGGAAGGGAATTTGTATTTGT
637 AAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAGGAAGGGAA--TGTA--TGT
**
812202 TTTTGGTTCCCATTCCCGATAAGAATGGAGACTTTTACAAGAATCAACGCTTGTCTCCTTTAAAG
698 TTTTGGTTCCCATTCTTGATAAGAATGGAGACTTTTACAAGAATCAA-GCTTGTCTCCTTTAAAG
812267 GTCAAACTTTGATTTTAAGGAAAAAAAGGCAAA-AAAAGGATTTCCACACCAAAGAAAACCATCA
762 GTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAGAAAA-GATTTCCACACCAAAGAAAACCATCA
* *
812331 ATATCATTAATCCTAAGAAGGAGAATGTGTTTAAAGTCTCCAATTTCAAAATAAATGGAGATCCT
826 ATATCATTAATCCTAAGAAGGAGAATGTGTTTAAAGTCTCCAATTGCAAAATAAATGAAGATCCT
**
812396 TACTAGAATCCATATTTGTCTCATTTAAGGCATGAACTTAGGCTTTTCAAAAAT
891 TACTAGAATCCATATTTACCTCATTTAAGGCATGAACTTAGGCTTTTCAAAAAT
812450 TAGTGGGAAGAAAGTGATTT-TTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGAC
1 TAGTGGGAAGAAAGTG-TTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGAC
* * * *
812514 TATATTTATGGTGCCTAATCTCGAAATGAAT-GGAAATAGTATGAGTATTCATATTTGTCCTATT
65 TATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATT
*
812578 TAAGAGACAAACTTTGATTCTATCAAGAACAGTGGTAAGAAAAGCTTCTCTTGCGGCACCAAAGC
130 TAAGAGACAAACTTTGATTCTATCAATAACAGTGGT-AGAAAAGCTTCTCTTGCGGCACCAAAGC
* * *
812643 ATTAATATCATGTATCCTAATGAAGGGAAAGTATTTTTGGCACCCAATTTTGAAAAGATTGGAGA
194 ATTAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCCC-ATTTTGAAAAGATTGGAGA
* * * *
812708 CTATTATGAGAATCAATGCTTGTCTTATTTAAAGGTCAAACATTGATTTTTATGAAAATAGGGCA
258 CTATTACGAGAATCAATGCTTGTCTTATTTAAAGGTCAAACTTTGA-TTTTAAGAAAAAAGGGCA
*
812773 AAGAAAAGATTTCCATGCCAAAAAAACCATCAATAACATTTATCCTAATGAGAAGAATGTGTTTA
322 AAGAAAAGATTTCCATGCCAAGAAAACCATCAATAACA-TTATCCTAATGAGAAGAATGTGTTTA
** *
812838 TAGTGCCTAATCTCAAAAGGAATGAAGGTCACCGTTCGAATCTTGGTTTGTCTCTTTCGAGGCAT
386 TAGTGCCTAATCTCAAAACAAATGAAGGT-ACCGTTCGAATCCTGGTTTGTCTCTTT-GAGGCAT
* * * *
812903 GGA--GA-CTTTACAAAAATTGGC-GGGAAAAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATC
449 GAACTTAGCTTTACAAAAATT-GCTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCAATATC
*
812964 GTGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAATGAATGGGGATTAGTATGA
513 GTGTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGA
*
813029 GTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAATGGTGGAAGAAAAGCT
578 GTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCT
813094 TCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAGGAAGGGAATG--TGTTTTTGGTTCC
643 TCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAGGAAGGGAATGTATGTTTTTGGTTCC
* *
813157 CATTCTTGATAAGAATGGAGACTTTTACAAGAATCAATGCTTGTCTCATTGAAAGGTCAAACTTT
708 CATTCTTGATAAGAATGGAGACTTTTACAAGAATCAA-GCTTGTCTCCTTTAAAGGTCAAACTTT
* * * *
813222 GATTTTTAGGAAAAAAAGGCAAAGAAAAGATTTCCACACCAAATAAAACCATAAATATTATTAAT
772 GATTTTAAGGAAAAAAAGGCAAAGAAAAGATTTCCACACCAAAGAAAACCATCAATATCATTAAT
813287 CCTA
837 CCTA
813291 GTGGGAAGAA
Statistics
Matches: 1574, Mismatches: 176, Indels: 91
0.85 0.10 0.05
Matches are distributed among these distances:
937 2 0.00
938 6 0.00
939 131 0.08
940 347 0.22
941 123 0.08
943 4 0.00
945 135 0.09
946 4 0.00
947 35 0.02
948 2 0.00
949 4 0.00
951 211 0.13
952 3 0.00
953 1 0.00
954 4 0.00
955 79 0.05
956 83 0.05
957 384 0.24
958 16 0.01
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.31
Consensus pattern (944 bp):
TAGTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACT
ATATTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTT
AAGAGACAAACTTTGATTCTATCAATAACAGTGGTAGAAAAGCTTCTCTTGCGGCACCAAAGCAT
TAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCCCATTTTGAAAAGATTGGAGACTA
TTACGAGAATCAATGCTTGTCTTATTTAAAGGTCAAACTTTGATTTTAAGAAAAAAGGGCAAAGA
AAAGATTTCCATGCCAAGAAAACCATCAATAACATTATCCTAATGAGAAGAATGTGTTTATAGTG
CCTAATCTCAAAACAAATGAAGGTACCGTTCGAATCCTGGTTTGTCTCTTTGAGGCATGAACTTA
GCTTTACAAAAATTGCTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCAATATCGTGTATCC
TTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCAT
GTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGC
GACACCAAAGCATCAATGTCATGTATCCTAAGGAAGGGAATGTATGTTTTTGGTTCCCATTCTTG
ATAAGAATGGAGACTTTTACAAGAATCAAGCTTGTCTCCTTTAAAGGTCAAACTTTGATTTTAAG
GAAAAAAAGGCAAAGAAAAGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAAGAAG
GAGAATGTGTTTAAAGTCTCCAATTGCAAAATAAATGAAGATCCTTACTAGAATCCATATTTACC
TCATTTAAGGCATGAACTTAGGCTTTTCAAAAAT
Found at i:813642 original size:370 final size:369
Alignment explanation
Indices: 812924--813648 Score: 1024
Period size: 370 Copynumber: 2.0 Consensus size: 369
812914 AAAAATTGGC
* * * *
812924 GGGAAAAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGT
1 GGGAAAAAAGCGTTCCTTGCAAAACCAAAGCATCAATACCATGTATCCATATGAGAAGACTATGT
* * *
812989 TTGTGGTGCCTAATCCTGAAATGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGA
66 TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTGTGTCTTATTTAAGA
** *
813054 GACAAACTTTGATTCTATCAATAATGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCAAT
131 GACAAACTTTGATTCTATCAATAACAGTGGAAGAAAAGCTTCTCTAGCGACACCAAAGCATCAAT
* * * * * *
813119 GTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGATAAGAATGGAGACTTTTA
196 GTCATGTATCCTAAGGAAGGGAATGTATTTTTGGCTCCCAATATTGAAAAGAATGGAGACTATTA
* **
813184 CAAGAATCAATGCTTGTCTCATTGAAAGGTCAAACTTTGATTTTTAGGAAAAAAAGGCAAAGAAA
261 CAAGAATCAATGCTTCTCTCATTGAAAGGTCAAACTTTGATTTTTAACAAAAAAAGGCAAAGAAA
*
813249 AGATTTCCACACCAAATAAAACCATAAATATTATTAATCCTAGT
326 AGATTTCCACACCAAAGAAAACCATAAATATTATTAATCCTAGT
* * * *
813293 GGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGGGAAGACTATGT
1 GGGAAAAAAGCGTTCCTTGCAAAACCAAAGCATCAATACCATGTATCCATATGAGAAGACTATGT
* * *
813358 TTATGGTGCCT-ATTCTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTGTGTCTTATTTAGG
66 TTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTGTGTCTTATTTAAG
* * *
813422 AGACAAACTTTGATTCTATCAATACCAGTGGTAA-AAGAAGCTTCTCTAGCGGCACCAAAGCATT
130 AGACAAACTTTGATTCTATCAATAACAGTGG-AAGAA-AAGCTTCTCTAGCGACACCAAAGCATC
* * *
813486 AATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCTCAATATTGAAAAGATTGGAGACTA
193 AATGTCATGTATCCTAAGGAAGGGAATGTATTTTTGGCTCCCAATATTGAAAAGAATGGAGACTA
* * * * *
813551 TTACGAGAATCAATGCTTCTCTTATTTAAGGGTCAAACTTTGA-TTTTAACAAAAATAGGGCAAA
258 TTACAAGAATCAATGCTTCTCTCATTGAAAGGTCAAACTTTGATTTTTAACAAAAA-AAGGCAAA
** *
813615 GAAAAGATTTCCATGCCAAAGAAAACCATCAATA
322 GAAAAGATTTCCACACCAAAGAAAACCATAAATA
813649 ACATCTATCC
Statistics
Matches: 311, Mismatches: 41, Indels: 7
0.87 0.11 0.02
Matches are distributed among these distances:
368 4 0.01
369 150 0.48
370 157 0.50
ACGTcount: A:0.35, C:0.15, G:0.19, T:0.30
Consensus pattern (369 bp):
GGGAAAAAAGCGTTCCTTGCAAAACCAAAGCATCAATACCATGTATCCATATGAGAAGACTATGT
TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTGTGTCTTATTTAAGA
GACAAACTTTGATTCTATCAATAACAGTGGAAGAAAAGCTTCTCTAGCGACACCAAAGCATCAAT
GTCATGTATCCTAAGGAAGGGAATGTATTTTTGGCTCCCAATATTGAAAAGAATGGAGACTATTA
CAAGAATCAATGCTTCTCTCATTGAAAGGTCAAACTTTGATTTTTAACAAAAAAAGGCAAAGAAA
AGATTTCCACACCAAAGAAAACCATAAATATTATTAATCCTAGT
Found at i:815410 original size:945 final size:936
Alignment explanation
Indices: 813292--815560 Score: 2874
Period size: 945 Copynumber: 2.4 Consensus size: 936
813282 TTAATCCTAG
*
813292 TGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGGGAAGACTATG
1 TGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTATG
* * * *
813357 TTTATGGTGCCTATTCTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTGTGTCTTATTTAGG
66 TTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* * * *
813422 AGACAAACTTTGATTCTATCAATACCAGTGGTAA-AAGAAGCTTCTCTAGCGGCACCAAAGCATT
131 AGACAAACTTTGATTCTATCAATAACGGTGG-AAGAA-AAGCTTCTCTTGCGACACCAAAGCATT
* * * * * * * * *
813486 AATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCTCAATATTGAAAAGATTGGAGACTA
194 AATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGATAAGAATGGAGACTT
* * * * * *
813551 TTACGAGAATCAATGCTTCTCTTATTTAAGGGTCAAACTTTGATTTTAA-CAAAAATAGGGCAAA
259 TTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAA-AAGGCAAA
** * *
813615 GAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATCT-ATCCTAATGAGAAGAATGTGTTTG
323 GAAAAGATTTCCACACCAAAGAAAACCATCAATATCAT-TAATCCTAATGAGAAGAATGTGTTTA
* * * * * *
813679 TAGTGCCTAATCTCAAAACAAATAAAGGTCACCGTTCGAATCCTGGTTTGTCTCTTTTGAGGCAT
387 AAGTGCCCAATCTCAAAACAAATAAAGAT-ACCGTTCGAATCCTGATTTGTCTCATTTAAGGCAT
* *
813744 GAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCAATATC
451 GAACTTAGACTTTACAAAAATTAGTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCAATACC
* * * * * *
813809 GTCTATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAATAAATGGGGACTAGTATGAG
516 ATCTATCCATATGAGAAGACTATATTTATGGTGCCTAATCCTGAATAAATGGGAAATAGTATGAG
* * * * *
813874 TTTTCATGTTTATCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTT
581 TATTCATATTTATCCTATTTAAGAGACAAACTTTGATTCTATCAAGAACAGTGGAAGAAAAGCTT
* * **
813939 CTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATGTTTGGTTCCCAA
646 CTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAAGGGAAAGTATGTTTGGCACCCAA
*
814004 TCTTGAAAAAGTTGGAGACTGTTACGAGAATCAATGCTTAGGTTCAAACTTTGATTTTAAGGAAA
711 TCTTGAAAAAGTTGGAGACTATTACGAGAATCAATGCTTAGGTTCAAACTTTGATTTTAAGGAAA
*** * *
814069 ATAGGGCAAAGAAAAGATTTTTGTGCCAAAGAAAACCATCAATATCATTAATCCTAATAAGGAGA
776 ATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTAATCCTAATAAGAAGA
* * ***
814134 ATGTGTTTAAAGTGCCCAATTGCATAATAAATGAAGATCTTTACTAGAATCCATGTTTACCTCAT
841 ATGTGTTTAAAGTGCCCAATTGCAAAAGAAATGAAGATCACCACTAGAATCCATGTTTACCTCAT
* *
814199 TTAAGGCATGAACTTATGCTTTTCAAAAATTAC
906 TTAAGGCATGAAC-GA-GCTTTACAAAAATTAC
* *
814232 TGGGAAGAAAGTGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTATA
1 TGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTATG
*
814297 TTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATATTTGTCTTATTTAAG
66 TTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* * *
814362 AGACAAACATTGATTCTATCAATAACGGTGGGAGAAAAGCTTCTCTTACGACACCAAAGCATTAA
131 AGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATTAA
**
814427 TGTCATGTATCCTAAGGAAGGGAATTTGTATTTGTTTTTGGTTCCCATTCCCGATAAGAATGGAG
196 TGTCATGTATCCTAAGGAAGGGAA--TG----TGTTTTTGGTTCCCATTCTTGATAAGAATGGAG
* *
814492 ACTTTTACAAGAATCAACGCTTGTCTCCTTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGC
255 ACTTTTACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGC
*
814557 AAA-AAAAGGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAA-GAAGGAGAATGTG
320 AAAGAAAA-GATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATG-AGAAGAATGTG
* **
814620 TTTAAAGT-CTCCAAT-TGCAAAATAAATGGAGAT-CC-TTACTAGAATCCAT-ATTTGTCTCAT
383 TTTAAAGTGC-CCAATCT-CAAAACAAATAAAGATACCGTT-C--GAATCC-TGATTTGTCTCAT
* * * *
814680 TTAAGGCATGAACTTAGGCTTTTCAAAAATTAGTGGGAAGAAAGTGATT-TTTGCAAAACCAAAG
442 TTAAGGCATGAACTTAGACTTTACAAAAATTAGTGGGAAGAAAGCG-TTCCTTGCAAAACCAAAG
* * *
814744 TATCAATACCATGTATCCATATGAGAAGACTATATTTATGGTGCCTAAT-CTCGAAATGAAT-GG
506 CATCAATACCATCTATCCATATGAGAAGACTATATTTATGGTGCCTAATCCT-G-AATAAATGGG
*
814807 AAATAGTATGAGTATTCATATTTGTCCTATTTAAGAGACAAACTTTGATTCTATCAAGAACAGTG
569 AAATAGTATGAGTATTCATATTTATCCTATTTAAGAGACAAACTTTGATTCTATCAAGAACAGTG
* *
814872 GTAAGAAAAGCTTCTCTTGCGGCACCAAAGCATTAATATCATGTATCCTAATGAAGGGAAAGTAT
634 G-AAGAAAAGCTTCTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAAGGGAAAGTAT
* * *
814937 TTTTGGCACCCAATTTTG-AAAAGATTGGAGACTATTATGAGAATCAATGCTTGTCTTATTTAAA
698 GTTTGGCACCCAATCTTGAAAAAG-TTGGAGACTATTACGAGAATCAA----TG-C----TT--A
* *
815001 GG-TCAAACTTTGATTTTTATGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAA-AAAACCATC
751 GGTTCAAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAACCATC
* * * * * *
815064 AATAACATTTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCT-CAAAAGGAATGAAGGTC
816 AATAACATTAATCCTAATAAGAAGAATGTGTTTAAAGTGCCCAAT-TGCAAAAGAAATGAAGATC
** * * ** * * *
815128 ACCGTTCGAAT-CTTGGTTTGTCTC-TTTCGAGGCATGGA-GA-CTTTACAAAAATTGGC
880 ACCACTAGAATCCAT-GTTTACCTCATTT-AAGGCATGAACGAGCTTTACAAAAATT-AC
* * * * * * *
815184 -GGGAAAAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATG
1 TGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTATG
* *
815248 TTTGTGGTGCCTAATC-CTGAAATGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
66 TTTATGGTGCCTAATCTC-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
* *
815312 GAGACAAACTTTGATTCTATCAATAATGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCA
130 GAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATTA
815377 ATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGATAAGAATGGAGACTTT
195 ATGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGATAAGAATGGAGACTTT
*
815442 TACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTTAGGAAAAAAAGGCAAAGA
260 TACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAGA
* * * * *
815507 AAAGATTTCCACACCAAATAAAACCATAAATATTATTAATCCTAGTGGGAAGAA
325 AAAGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATGAGAAGAA
815561 AGCGTTTCTT
Statistics
Matches: 1153, Mismatches: 136, Indels: 75
0.85 0.10 0.05
Matches are distributed among these distances:
939 50 0.04
940 152 0.13
941 2 0.00
942 2 0.00
943 3 0.00
944 10 0.01
945 463 0.40
946 113 0.10
949 2 0.00
950 3 0.00
951 212 0.18
952 1 0.00
953 1 0.00
954 5 0.00
955 83 0.07
956 48 0.04
957 3 0.00
ACGTcount: A:0.35, C:0.15, G:0.19, T:0.31
Consensus pattern (936 bp):
TGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGAGAAGACTATG
TTTATGGTGCCTAATCTCGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
AGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATTAA
TGTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGATAAGAATGGAGACTTTT
ACAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTAAGGAAAAAAAGGCAAAGAA
AAGATTTCCACACCAAAGAAAACCATCAATATCATTAATCCTAATGAGAAGAATGTGTTTAAAGT
GCCCAATCTCAAAACAAATAAAGATACCGTTCGAATCCTGATTTGTCTCATTTAAGGCATGAACT
TAGACTTTACAAAAATTAGTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCAATACCATCTA
TCCATATGAGAAGACTATATTTATGGTGCCTAATCCTGAATAAATGGGAAATAGTATGAGTATTC
ATATTTATCCTATTTAAGAGACAAACTTTGATTCTATCAAGAACAGTGGAAGAAAAGCTTCTCTT
GCGACACCAAAGCATCAATATCATGTATCCTAATGAAGGGAAAGTATGTTTGGCACCCAATCTTG
AAAAAGTTGGAGACTATTACGAGAATCAATGCTTAGGTTCAAACTTTGATTTTAAGGAAAATAGG
GCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTAATCCTAATAAGAAGAATGTG
TTTAAAGTGCCCAATTGCAAAAGAAATGAAGATCACCACTAGAATCCATGTTTACCTCATTTAAG
GCATGAACGAGCTTTACAAAAATTAC
Found at i:815902 original size:370 final size:369
Alignment explanation
Indices: 815184--815908 Score: 1042
Period size: 370 Copynumber: 2.0 Consensus size: 369
815174 AAAAATTGGC
* * * *
815184 GGGAAAAAAGCGTTCCTTGCAAAGCCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGT
1 GGGAAAAAAGCGTTCCTTGCAAAACCAAAGCATCAATACCATGTATCCATATGAGAAGACTATGT
* * *
815249 TTGTGGTGCCTAATCCTGAAATGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGA
66 TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTGTGTCTTATTTAAGA
** *
815314 GACAAACTTTGATTCTATCAATAATGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCAAT
131 GACAAACTTTGATTCTATCAATAACAGTGGAAGAAAAGCTTCTCTAGCGACACCAAAGCATCAAT
* * * * * *
815379 GTCATGTATCCTAAGGAAGGGAATGTGTTTTTGGTTCCCATTCTTGATAAGAATGGAGACTTTTA
196 GTCATGTATCCTAAGGAAGGGAATGTATTTTTGGCTCCCAATATTGAAAAGAATGGAGACTATTA
* **
815444 CAAGAATCAATGCTTGTCTCATTTAAAGGTCAAACTTTGATTTTTAGGAAAAAAAGGCAAAGAAA
261 CAAGAATCAATGCTTCTCTCATTTAAAGGTCAAACTTTGATTTTTAACAAAAAAAGGCAAAGAAA
*
815509 AGATTTCCACACCAAATAAAACCATAAATATTATTAATCCTAGT
326 AGATTTCCACACCAAAGAAAACCATAAATATTATTAATCCTAGT
* * * *
815553 GGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGGGAAGACTATGT
1 GGGAAAAAAGCGTTCCTTGCAAAACCAAAGCATCAATACCATGTATCCATATGAGAAGACTATGT
* *
815618 TTATGGTGCCTAAT-CTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTGTGTCTTATTTAGG
66 TTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTGTGTCTTATTTAAG
* * *
815682 AGACAAACTTTGATTCTATCAATACCAGTGGTAA-AAGAAGCTTCTCTAGCGGCACCAAAGCATT
130 AGACAAACTTTGATTCTATCAATAACAGTGG-AAGAA-AAGCTTCTCTAGCGACACCAAAGCATC
* * *
815746 AATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCTCAATATTGAAAAGATTGGAGACTA
193 AATGTCATGTATCCTAAGGAAGGGAATGTATTTTTGGCTCCCAATATTGAAAAGAATGGAGACTA
* * * *
815811 TTACGAGAATCAATGCTTCTCTTATTTAAGGGTCAAACTTTGA-TTTTAACAAAAATAGGGCAAA
258 TTACAAGAATCAATGCTTCTCTCATTTAAAGGTCAAACTTTGATTTTTAACAAAAA-AAGGCAAA
** *
815875 GAAAAGATTTCCATGCCAAAGAAAACCATCAATA
322 GAAAAGATTTCCACACCAAAGAAAACCATAAATA
815909 ACATCTATCC
Statistics
Matches: 313, Mismatches: 39, Indels: 7
0.87 0.11 0.02
Matches are distributed among these distances:
368 2 0.01
369 153 0.49
370 158 0.50
ACGTcount: A:0.35, C:0.15, G:0.19, T:0.30
Consensus pattern (369 bp):
GGGAAAAAAGCGTTCCTTGCAAAACCAAAGCATCAATACCATGTATCCATATGAGAAGACTATGT
TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTGTGTCTTATTTAAGA
GACAAACTTTGATTCTATCAATAACAGTGGAAGAAAAGCTTCTCTAGCGACACCAAAGCATCAAT
GTCATGTATCCTAAGGAAGGGAATGTATTTTTGGCTCCCAATATTGAAAAGAATGGAGACTATTA
CAAGAATCAATGCTTCTCTCATTTAAAGGTCAAACTTTGATTTTTAACAAAAAAAGGCAAAGAAA
AGATTTCCACACCAAAGAAAACCATAAATATTATTAATCCTAGT
Found at i:816272 original size:474 final size:475
Alignment explanation
Indices: 815551--817952 Score: 3045
Period size: 474 Copynumber: 5.1 Consensus size: 475
815541 ATTAATCCTA
* * * * *
815551 GTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGGGAAGACTAT
1 GTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAT
* *
815616 GTTTATGGTGCCTAAT-CTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTGTGTCTTATTTA
66 GTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * * *
815680 GGAGACAAACTTTGATTCTATCAATACCAGTGGTAA-AAGAAGCTTCTCTAGCGGCACCAAAGCA
130 AGAGACAAACTTTGATTCTATCAATAACGGTGG-AAGAA-AAGCTTCTCTTGCGACACCAAAGCA
* * * *
815744 TTAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGCTCTCAATATTGAAAAGATTGGAGAC
193 TCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGAC
* * *
815809 TATTACGAGAATCAATGCTTCTCTTATTTAAGGGTCAAACTTTGATTTTAACAAAAATAGGGCAA
258 TGTTACGAGAATCAATGCTTATCTTATTTAAGGGTCAAACTTTGATTTTAACGAAAATAGGGCAA
* *
815874 AGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATCTATCCTAATGAGAAGAATGTGTTTG
323 AGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGAAGAATGTGTTTA
* ** * *
815939 TAGTGCCTAATCTCAAAACAAATGAAGGTCACCGTTCGAATCCTGGTTTGTCTCTTTTGAGGCAT
388 TAGTGCCTAATCTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCAC
816004 GAACTTAGACTTTACAAAAATTG
453 GAACTTAGACTTTACAAAAATTG
* *
816027 GTGGGAAGAAAGCGTTCCTTGCAAAACCAAAGCATCAATATCGTCTATCCTTATGAGAAGACTAT
1 GTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAT
* * * * *
816092 GTTTGTGGTGCCTAATCCTGAATA-AATGGGGACTAGTATGAGTTTTCATGTTTATCTTATTTAA
66 GTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
816156 GAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCA
131 GAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCA
*
816221 ATGTCATGTATCCTAATGAAGGGAATGTATGTTTGGTTCCCAATCTTGAAAA-AGTTGGAGACTG
196 ATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGA-TTGGAGACTG
* *
816285 TTACGAGAATCAATG-----C----TT-AGGTTCAAACTTTGATTTTAAGGAAAATAGGGCAAAG
260 TTACGAGAATCAATGCTTATCTTATTTAAGGGTCAAACTTTGATTTTAACGAAAATAGGGCAAAG
*** * *
816340 AAAAGATTTTTGTGCCAAAGAAAACCATAAATAACATTTATCCTAATGAGGAGAATGTGTTTATA
325 AAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGAAGAATGTGTTTATA
* * * *
816405 GTGCCTAATCTCAAAACCAATGAAGATCATTGTTTGAATCCTTGTTTGTCTCTTTTGTGGCAGGA
390 GTGCCTAATCTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCACGA
* *
816470 ACTTAGGCTTTTCAAAAATTG
455 ACTTAGACTTTACAAAAATTG
* * * * ** *
816491 GTGGCAAGAAAGTGTTTCTTGCGAAACTAAAGCATCAATGCCATGTATCCTTATGAGAAGACTAT
1 GTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAT
* * * *
816556 GTTCATGGTGGCTAATCCTGAAAAGAATGGGGCTTAGTATAAGTATTCATGTTTGTCTTATTTAA
66 GTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
* ** * * * * * **
816621 TAGACAAACTTTGATTCTATCAATAATAGTGGAAAGAAAAACCTTCTTTTTCAACCCCAAAAAAT
131 GAGACAAACTTTGATTCTATCAATAACGGTGG-AAG-AAAAGCTTCTCTTGCGACACCAAAGCAT
* ** * *
816686 CAATGTCATGTATCCTATTGAAGGGAATGTGCTTTTGGTTCCCAATCTTGAAAAGTTTGGAGATT
194 CAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGACT
* * * * * *
816751 GTCATGAGAATCAATGCTTATCTTATTTAAGGGTCAAACTTTGATTTTGAGGGAAATAGGACAAA
259 GTTACGAGAATCAATGCTTATCTTATTTAAGGGTCAAACTTTGATTTTAACGAAAATAGGGCAAA
* * * * * * *
816816 AAAAAGCTTTCCCTACCAAAGAAAACCATCAATAACATTTACCCTAAAGAGCAGAATGTGTTTAT
324 GAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGAAGAATGTGTTTAT
** * * * **
816881 AGTGCCTAATCTCAAAAGGAATGAAGATCATTGTTGGAATGCTTGTTTGTCTCATTTGAGGTGCG
389 AGTGCCTAATCTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCACG
*
816946 AGCTTAGACTTTACAAAAATTG
454 AACTTAGACTTTACAAAAATTG
* * *
816968 GTGGGAAGAAAGCATTTCTTGCAAAACCAAAGCGTCATTATCGTGTATCCTTATGAGAAGACTAT
1 GTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAT
* * * * * *
817033 GTTTGTGGTGCCTAATCCCGAAATA-AATAGGGATTAGTGTGAGCATTCATGTTTGTCTTTTTTA
66 GTTTATGGTGCCTAATCCTGAAA-AGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * *
817097 GGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTACTACCCCAAAGCATC
130 AGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATC
* * * ** * *
817162 AATGCCATGTATCCTAGTGAGGGGAATGCGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTT
195 AATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGACTG
* * *
817227 TTACGAGAATCAATG-TTGTCTCATTTAAGGGTCAAACTTTTATTTTAATC-AAAATAGGGCAAA
260 TTACGAGAATCAATGCTTATCTTATTTAAGGGTCAAACTTTGATTTTAA-CGAAAATAGGGCAAA
* * ** *
817290 GAAAAGATTTCCTTGCTAAAGAAAACCATCAATTTCATTTATCCTAATGA-AGATAATGTGTTTA
324 GAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGA-AGAATGTGTTTA
* * * * ** * * * *
817354 TGGTGCCAAATCACAACATGAATGAAGATC--TGTACTTGAATCCATGTTTATCTCATTTGAGGC
388 TAGTGCCTAATCTCAAAACAAATGAAGATCATTGT--TCGAATCCTTGTTTGTCTCTTTTGAGGC
* **
817417 ACGAACTTGGACTTTTGAAAAATTG
451 ACGAACTTAGACTTTACAAAAATTG
* * *
817442 GTGGGAAGAAAGTGTTTCTTGCAAAACCAAAGCATCAATATCGAGTATCCTTATGAGAAAACTAT
1 GTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAT
* *
817507 GTTTATGGTGCCTAATCCTTG-AAAGAATGGGGATTGGTATGAGTATTCATGTCTGTCTTATTTA
66 GTTTATGGTGCCTAATCC-TGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* *
817571 AGAGACAAACTTTGATTTTATCAATAACGGTGGAAGAAAAGCTTCTCTTGC-ATCAGCAAAGCAT
130 AGAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGA-CACCAAAGCAT
* * * *
817635 CAATGTCATGTATCCTAATGAAGAGAATGTATTTTTTGTTCCTAATCTTCAAAAGATTGGAGACT
194 CAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGACT
* *
817700 GTTATG-GAAATCAATGCTTATCTTATTTAAGGGCCAAACTTTGATTTT-ACGGAAAATAGGGCA
259 GTTACGAG-AATCAATGCTTATCTTATTTAAGGGTCAAACTTTGATTTTAAC-GAAAATAGGGCA
* * * * *
817763 AAGAAAAGATTTCCATGCCAAAGAAAACCAACAATAATATTTATCTTAATGAGGAGAATATGTTT
322 AAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGAAGAATGTGTTT
* *
817828 ATAGTGCCCAATCTCAAAACAAATTAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCA
387 ATAGTGCCTAATCTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCA
* *
817893 CGAACTTAGACTTTATAAAATTTG
452 CGAACTTAGACTTTACAAAAATTG
* * *
817917 GAGGGAA-AAAACTGTTTTTTGCAAAACCAAAGCATC
1 GTGGGAAGAAAGC-GTTTCTTGCAAAACCAAAGCATC
817953 TGATGACAAC
Statistics
Matches: 1648, Mismatches: 245, Indels: 67
0.84 0.12 0.03
Matches are distributed among these distances:
464 244 0.15
465 66 0.04
466 3 0.00
467 93 0.06
469 1 0.00
472 4 0.00
473 5 0.00
474 498 0.30
475 348 0.21
476 82 0.05
477 303 0.18
478 1 0.00
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (475 bp):
GTGGGAAGAAAGCGTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAT
GTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
GAGACAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCA
ATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGATTGGAGACTGT
TACGAGAATCAATGCTTATCTTATTTAAGGGTCAAACTTTGATTTTAACGAAAATAGGGCAAAGA
AAAGATTTCCATGCCAAAGAAAACCATCAATAACATTTATCCTAATGAGAAGAATGTGTTTATAG
TGCCTAATCTCAAAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCACGAA
CTTAGACTTTACAAAAATTG
Found at i:817620 original size:158 final size:155
Alignment explanation
Indices: 815554--817655 Score: 491
Period size: 158 Copynumber: 13.3 Consensus size: 155
815544 AATCCTAGTG
* * * * *
815554 GGAAG-AAAGCGTTTCTTGCAAAACCAAAGTATCAATACCATGTATCCATATGGGAAGACTATGT
1 GGAAGAAAAGC-TTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAA-AATATGT
* * * * * *
815618 TTATGGTGCCTAAT-CTCGAAAAGAATGGGGATTAGTTTGAGTATTCATGTGTGTCTTATTTAGG
64 TTATGGTGCCTAATCCT-GAAATGAATGGAGATT-GTATGAG-ATTCATGTTTGTCTCATTTAAG
* * *
815682 AGACAAACTTTGATTCTATCAAT-ACCAGT
126 AGACAAACTTTGATTTTATCAATAATCGGT
* *** * * * ** *
815711 GGTAA-AAGAAGCTTCTCTAGCGGCACCAAAGCATTAATGTCATGTATCCTAATGAAGGGAATGT
1 GG-AAGAA-AAGCTT-TCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATG-AGAAAATAT
* * ** * * * * * * *
815775 ATTT-TTG-GCTCTCAATATTGAAAAGATTGGAGACTAT-TACGAGAATCAATGCTTCTCTTATT
62 GTTTATGGTGC-CT-AATCCTGAAATGAATGGAGA-T-TGTATGAGATTC-ATGTTTGTCTCATT
* * * * *
815837 TAAGGGTCAAACTTTGATTTTAACAAAAATAGG-
122 TAAGAGACAAACTTTGATTTTATCAATAATCGGT
* * * * ** * * * * *
815870 GCAAAGAAAAGATTTCCATGCCAAAGAAAACCATCAATAACATCTATCCTAATGAGAAGAATGTG
1 G-GAAGAAAAGCTTT-CTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAA-AATATG
* * ** ** ** *
815935 TTTGTAGTGCCTAATCTCAAAACAAATGAA-GGTCACCGT-TCGA-A-TCCTGGTTTGTCTC-TT
63 TTTATGGTGCCTAATC-C---TGAAATGAATGGAGATTGTAT-GAGATTCAT-GTTTGTCTCATT
* * * * * *
815995 T-TGAGGCATGAACTTAGACTTTA-CAAAAATTGGT
122 TAAGAGACA--AACTTTGATTTTATCAATAATCGGT
* * * *
816029 GGGAAG-AAAGCGTTCCTTGCAAAACCAAAGCATCAATATCGTCTATCCTTATGAGAAGACTATG
1 -GGAAGAAAAGC-TTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAA-AATATG
* * * * * * *
816093 TTTGTGGTGCCTAATCCTG-AATAAATGGGGACTAGTATGAGTTTTCATGTTTATCTTATTTAAG
63 TTTATGGTGCCTAATCCTGAAATGAATGGAGA-TTGTATGAG-ATTCATGTTTGTCTCATTTAAG
*
816157 AGACAAACTTTGATTCTATCAATAA-CGGT
126 AGACAAACTTTGATTTTATCAATAATCGGT
* * * * **
816186 GGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTAT
1 GGAAGAAAAGCTT-TCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATG-A--GAAAATAT
* * * * * * *
816251 G-TT-TGGTTCCCAATCTTGAAA--AAGTTGGAGACTGTTACGAGAATCA---ATG---C--TT-
62 GTTTATGGTGCCTAATCCTGAAATGAA--TGGAGATTG-TATGAGATTCATGTTTGTCTCATTTA
* ** *
816303 AG-GTTCAAACTTTGATTTTAAGGAA-AATAGG-
124 AGAG-ACAAACTTTGATTTT-ATCAATAATCGGT
* * * * ** * * * * * * *
816334 GCAAAGAAAAGATTTTTGTGCCAAAGAAAACCATAAATAACATTTATCCTAATGAGGAGAATGTG
1 G-GAAGAAAAGCTTTCT-TGCAAAACCAAAGCATCAATATCATGTATCCTTATGA-GAAAATATG
* * ** * * * *
816399 TTTATAGTGCCTAAT-CTCAAAACCAATGAAGATCATTGTTTGA-ATCCTTGTTTGTCTC-TTT-
63 TTTATGGTGCCTAATCCT-GAAATGAATG--GA-GATTGTATGAGATTCATGTTTGTCTCATTTA
* * * * ** * *
816460 TGTGGCAGGAACTTAGGCTTT-TCAAAAATTGGT
124 AGAGACA--AACTTTGATTTTATCAATAATCGGT
* * * ** *
816493 GGCAAG-AAAGTGTTTCTTGCGAAACTAAAGCATCAATGCCATGTATCCTTATGAGAAGACTATG
1 GG-AAGAAAAG-CTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAA-AATATG
* * * * * * * *
816557 TTCATGGTGGCTAATCCTGAAAAGAATGGGGCTTAGTATAAGTATTCATGTTTGTCTTATTTAAT
63 TTTATGGTGCCTAATCCTGAAATGAATGGAGATT-GTATGAG-ATTCATGTTTGTCTCATTTAAG
* *
816622 AGACAAACTTTGATTCTATCAATAAT-AGT
126 AGACAAACTTTGATTTTATCAATAATCGGT
* * * ** ** * ** *
816651 GGAAAGAAAAACCTTCTTTTTCAACCCCAAAAAATCAATGTCATGTATCC-TATTGAAGGGAATG
1 GG-AAG-AAAAGCTT-TCTTGCAAAACCAAAGCATCAATATCATGTATCCTTA-TG-AGAAAATA
* * * * ** * * * *
816715 TGCTTT-TGGTTCCCAATCTTGAAAAGTTTGGAGATTGTCATGAGAATCAATGCTTATCTTATTT
61 TG-TTTATGGTGCCTAATCCTGAAATGAATGGAGATTGT-ATGAGATTC-ATGTTTGTCTCATTT
* * *** * *
816779 AAGGGTCAAACTTTGATTTTGAGGGA-AATAGGA
123 AAGAGACAAACTTTGATTTT-ATCAATAATCGGT
** * * * * ** * * * * * * * *
816812 CAAAAAAAAGCTTTCCCTACCAAAGAAAACCATCAATAACATTTACCCTAAAGAGCAGAATGTGT
1 GGAAGAAAAGCTTT-CTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAG-AAAATATGT
* * * * * * *
816877 TTATAGTGCCTAAT-CTCAAAAGGAATGAAGATCATTGT-TG-GAATGCTTGTTTGTCTCATTTG
64 TTATGGTGCCTAATCCT-GAAATGAATG--GA-GATTGTATGAG-ATTCATGTTTGTCTCATTTA
* * * * * * *
816939 AG-GTGCGAGCTTAGACTTTA-CAAAAATTGGT
124 AGAG-ACAAACTTTGATTTTATCAATAATCGGT
* * * *
816970 GGGAAG-AAAGCATTTCTTGCAAAACCAAAGCGTCATTATCGTGTATCCTTATGAGAAGACTATG
1 -GGAAGAAAAGC-TTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAA-AATATG
* * * * ** *
817034 TTTGTGGTGCCTAATCCCGAAATAAATAGG-GATTAGTGTGAGCATTCATGTTTGTCTTTTTTAG
63 TTTATGGTGCCTAATCCTGAAATGAAT-GGAGATT-GTATGAG-ATTCATGTTTGTCTCATTTAA
*
817098 GAGACAAACTTTGATTCTATCAATAA-CGGT
125 GAGACAAACTTTGATTTTATCAATAATCGGT
* * ** ** ** **
817128 GGAAGAAAAGCTTCTCTTACTACCCCAAAGCATCAATGCCATGTATCC-TAGTGAGGGGAATGCG
1 GGAAGAAAAGCTT-TCTTGCAAAACCAAAGCATCAATATCATGTATCCTTA-TGA-GAAAATATG
* * * * * * * *
817192 TTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTTTTACGAGAATCAATG-TTGTCTCATTTAAG
63 TTTATGGTGCCTAATCCTGAAATGAATGGAGA-TTGTATGAGATTC-ATGTTTGTCTCATTTAAG
* * * *
817256 GGTCAAACTTTTATTTTAATCAA-AATAGG-
126 AGACAAACTTTGATTTT-ATCAATAATCGGT
* * * ** * * * * * *
817285 GCAAAGAAAAGATTTCCTTGCTAAAGAAAACCATCAATTTCATTTATCCTAATGAAGATAATGTG
1 G-GAAGAAAAGCTTT-CTTGCAAAACCAAAGCATCAATATCATGTATCCTTATG-AGAAAATATG
* * * *
817350 TTTATGGTGCCAAATCAC--AACATGAATGAAGATCTGTACTTGA-ATCCATGTTTATCTCATTT
63 TTTATGGTGCCTAATC-CTGAA-ATGAATGGAGAT-TGTA--TGAGATTCATGTTTGTCTCATTT
* * * * * * *
817412 GAG-GCACGAACTTGGACTTT-TGAAAAATTGGT
123 AAGAG-ACAAACTTTGATTTTATCAATAATCGGT
*
817444 GGGAAG-AAAGTGTTTCTTGCAAAACCAAAGCATCAATATCGA-GTATCCTTATGAGAAAACTAT
1 -GGAAGAAAAG-CTTTCTTGCAAAACCAAAGCATCAATATC-ATGTATCCTTATGAGAAAA-TAT
* * *
817507 GTTTATGGTGCCTAATCCTTGAAA-GAATGGGGATTGGTATGAGTATTCATGTCTGTCTTATTTA
62 GTTTATGGTGCCTAATCC-TGAAATGAATGGAGATT-GTATGAG-ATTCATGTTTGTCTCATTTA
817571 AGAGACAAACTTTGATTTTATCAATAA-CGGT
124 AGAGACAAACTTTGATTTTATCAATAATCGGT
** * * *
817602 GGAAGAAAAGCTTCTCTTGCATCAGCAAAGCATCAATGTCATGTATCCTAATGA
1 GGAAGAAAAGCTT-TCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGA
817656 AGAGAATGTA
Statistics
Matches: 1362, Mismatches: 432, Indels: 301
0.65 0.21 0.14
Matches are distributed among these distances:
147 7 0.01
148 24 0.02
149 57 0.04
150 2 0.00
151 7 0.01
152 3 0.00
153 7 0.01
154 4 0.00
155 9 0.01
156 21 0.02
157 159 0.12
158 577 0.42
159 334 0.25
160 123 0.09
161 15 0.01
162 8 0.01
163 5 0.00
ACGTcount: A:0.33, C:0.15, G:0.20, T:0.31
Consensus pattern (155 bp):
GGAAGAAAAGCTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAAAATATGTTT
ATGGTGCCTAATCCTGAAATGAATGGAGATTGTATGAGATTCATGTTTGTCTCATTTAAGAGACA
AACTTTGATTTTATCAATAATCGGT
Found at i:822928 original size:9 final size:9
Alignment explanation
Indices: 822914--823016 Score: 68
Period size: 9 Copynumber: 11.1 Consensus size: 9
822904 ATCTTTCTAT
822914 TATCTCTCC
1 TATCTCTCC
822923 TATCTCTCC
1 TATCTCTCC
*
822932 T-TCTAT-C
1 TATCTCTCC
* *
822939 -ATCCCTTC
1 TATCTCTCC
*
822947 TATCTCTAC
1 TATCTCTCC
822956 TATCTCTCC
1 TATCTCTCC
822965 TATCTCTCTTC
1 TATCTCTC--C
*
822976 ATATCATCCCTTC
1 -TATC-T--CTCC
*
822989 TATCTCTAC
1 TATCTCTCC
*
822998 TATCTCTCT
1 TATCTCTCC
823007 TATCTCTCC
1 TATCTCTCC
823016 T
1 T
823017 CATATCATCC
Statistics
Matches: 74, Mismatches: 11, Indels: 18
0.72 0.11 0.17
Matches are distributed among these distances:
7 4 0.05
8 5 0.07
9 51 0.69
11 2 0.03
12 8 0.11
13 2 0.03
15 2 0.03
ACGTcount: A:0.15, C:0.39, G:0.00, T:0.47
Consensus pattern (9 bp):
TATCTCTCC
Found at i:822935 original size:24 final size:24
Alignment explanation
Indices: 822908--822995 Score: 73
Period size: 24 Copynumber: 3.9 Consensus size: 24
822898 TCCCTTATCT
* *
822908 TTCTATTATCTCTCCTATCTCTCC
1 TTCTATCATCCCTCCTATCTCTCC
*
822932 TTCTATCATCCCTTCTA--TCT-C
1 TTCTATCATCCCTCCTATCTCTCC
*
822953 TACTATC-T--CTCCTATCTCT-C
1 TTCTATCATCCCTCCTATCTCTCC
*
822973 TTCATATCATCCCTTCTATCTCT
1 TTC-TATCATCCCTCCTATCTCT
822996 ACTATCTCTC
Statistics
Matches: 51, Mismatches: 7, Indels: 12
0.73 0.10 0.17
Matches are distributed among these distances:
18 5 0.10
20 7 0.14
21 11 0.22
22 4 0.08
24 24 0.47
ACGTcount: A:0.15, C:0.38, G:0.00, T:0.48
Consensus pattern (24 bp):
TTCTATCATCCCTCCTATCTCTCC
Found at i:823046 original size:42 final size:42
Alignment explanation
Indices: 822893--823028 Score: 202
Period size: 42 Copynumber: 3.2 Consensus size: 42
822883 CTCCTTTTCC
* * * *
822893 TATCATCCCTTATCTTTCTATTATCTCTCCTATCTCTCCTTC-
1 TATCATCCCTTCTATCTCTACTATCTCTCCTATCTCTCC-TCA
*
822935 TATCATCCCTTCTATCTCTACTATCTCTCCTATCTCTCTTCA
1 TATCATCCCTTCTATCTCTACTATCTCTCCTATCTCTCCTCA
*
822977 TATCATCCCTTCTATCTCTACTATCTCTCTTATCTCTCCTCA
1 TATCATCCCTTCTATCTCTACTATCTCTCCTATCTCTCCTCA
823019 TATCATCCCT
1 TATCATCCCT
823029 CATATTTCTT
Statistics
Matches: 86, Mismatches: 7, Indels: 2
0.91 0.07 0.02
Matches are distributed among these distances:
41 2 0.02
42 84 0.98
ACGTcount: A:0.16, C:0.38, G:0.00, T:0.46
Consensus pattern (42 bp):
TATCATCCCTTCTATCTCTACTATCTCTCCTATCTCTCCTCA
Found at i:823811 original size:20 final size:21
Alignment explanation
Indices: 823786--823828 Score: 61
Period size: 21 Copynumber: 2.1 Consensus size: 21
823776 AATGCTGGTT
823786 TTTC-TTGTCTTTTTGCATTC
1 TTTCTTTGTCTTTTTGCATTC
* *
823806 TTTCTTTTTCTTTTTGTATTC
1 TTTCTTTGTCTTTTTGCATTC
823827 TT
1 TT
823829 AAAAAAAACT
Statistics
Matches: 20, Mismatches: 2, Indels: 1
0.87 0.09 0.04
Matches are distributed among these distances:
20 4 0.20
21 16 0.80
ACGTcount: A:0.05, C:0.16, G:0.07, T:0.72
Consensus pattern (21 bp):
TTTCTTTGTCTTTTTGCATTC
Found at i:824058 original size:15 final size:16
Alignment explanation
Indices: 824035--824067 Score: 50
Period size: 15 Copynumber: 2.1 Consensus size: 16
824025 CATAATCATT
*
824035 AATGCAAGAA-TAGAA
1 AATGAAAGAAGTAGAA
824050 AATGAAAGAAGTAGAA
1 AATGAAAGAAGTAGAA
824066 AA
1 AA
824068 AATAACAAAA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
15 9 0.56
16 7 0.44
ACGTcount: A:0.64, C:0.03, G:0.21, T:0.12
Consensus pattern (16 bp):
AATGAAAGAAGTAGAA
Found at i:826378 original size:475 final size:474
Alignment explanation
Indices: 824973--834579 Score: 11912
Period size: 475 Copynumber: 20.2 Consensus size: 474
824963 ACGCCAACGG
* *
824973 AAACCATTGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTAGGCTTTTC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* *
825038 AAAAATTGGTGGGAAGAAAGTGCTTT-TTGCGAAACCAAAGCATCAATACCATGTATCCTTATAA
65 AAAAATTGGTGGGAAGAAAGCG-TTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGA
* * **
825102 GAAGACTATGTTTATGGTACCTAATCCTGAAAACAATATGGATTAGTATGAGTATTCATGTTTGT
129 GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT
* *
825167 CTTATTTAAGAG-TAAAACTTTGATTCTATCAATAACGGCGGAAGAAAAGCTTCTCTTACGACAC
194 CTTATTTAAGAGAT-AAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAC
* *
825231 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCTAATCTTGAAAAAAA
258 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
** * * *
825296 TGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTCGATTTAAACGAAAAT
323 TGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
* * *
825361 AGGGCAAA-AAGAAGATTTCCATGCCAAAAAAAACCATCGATATCATTTATCCTAATGAGGAGAA
388 AGGGCAAAGAA-AAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAA
* * **
825425 TGTGCTTATAGTGCTTAATGACA
452 TGTGTTTATAGTGCCTAATCTCA
** * ** ** * * * * * *
825448 AAATGAATGAAGATCCTT-ACCAGAATCAATATTTGTGTCATTTAAGGCAAGAACTTTGTCTTTT
1 AAACCAATGAAGATCATTGTTC-GAATCCTTGTTTGTCTCTTTTAA-GCATGAACTTAGGCTTTT
* * * *
825512 GAAAAATTCGTGGGAAGAAAGCGTTTCTTGTGAAACCAAAGCATCAATACCATGTATCCTTGTGA
64 CAAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGA
* *
825577 GAAAACTATGTTTATAGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT
129 GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT
* * * * * **
825642 TTTATTTAAGAGATAAACTTTGATTCTATCAATAACAGTGGAAAGAAAAACTTTTCTTGTGATGC
194 CTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTTGCGACAC
* * * * * ** * *
825707 CAAAACATCAATGTCATGTATCTTAAAGAAAGAAATGAATTTTTGGTTCCTAATCTTGAAAAGAT
258 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
* * * * *
825772 TGGATACTGTTATGAGAATCAATGCTTGTCTTATTTACGGGTCAAACTTTGATTTTATGGAAAAT
323 TGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
* * * * * **
825837 AGGGTAAAGAAAAGA-ATTCTATGCTAAAGAAAACCATCAATAACATTTATCCTAATAAAAAGAA
388 AGGGCAAAGAAAAGATTTTC-ATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAA
** *
825901 TGTGTTTATAGTGCCCGATCTAA
452 TGTGTTTATAGTGCCTAATCTCA
* * * ** * *
825924 AAACAAATGACGATCATTGCTCGAATAGTTGTTTGTCTCTTTTAAGCAATGAACTTAGACTTTAC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTAAGC-ATGAACTTAGGCTTTTC
* * * * * * * * * * *
825989 AAAAATTGGAGGGAAGAAACCATATCCTGCAAAACAAAAGCAACAATATCGTGTATCCTTATGTG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * * * * *
826054 AAGACTATGTTTGTGGTGCCTAAT-CTAGAAATGAGTGGGGATTAGCATGAGCATTCAAGTTTGT
130 AAGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT
* * * * * ** *
826118 CTTTTTTAAGAGATAAACTTTGATTCTATCAATAACGATGGAAGAAATGGTTTTCTCACAACACC
194 CTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACC
* * *
826183 AAAGCATCAATGTCATGTATCCTAACGAAGGGAGTGTGTTTTTGGTTCCCAATCTTGAAGAGAAT
259 AAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAAT
* * *
826248 GGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAAGTTTGATTTTATGGAAAATA
324 GGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATA
* * * * *
826313 GGGCAAAGAAAAGATTTTCACGCTAAAGGAAACCGTCAATATCGTTTATCCTAATGAGGAGAATG
389 GGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATG
* *
826378 TATTTATAGTTCCTAATCTCA
454 TGTTTATAGTGCCTAATCTCA
* * *
826399 CAACCAATGAAGATCATTGTTTGAATCCTTGTTTGTCTCTTTTAAGGCATGAACTTAGGCTTTTT
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTAA-GCATGAACTTAGGCTTTTC
* ** **
826464 AAAAATTAGCAGGAAGAAAGTTTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
*
826529 AAGACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
130 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* *
826594 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTTTCCTGCGACACCA
195 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCA
* * * *
826659 AAGCATCAATGTCATATGTCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAATGATTG
260 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATG
* * * *
826724 GAGACTGTTACGAGAATCAATGCTTGTCTTATTTAA-GGTCAAAGTTTGATTTTAAGGAAAATAG
325 GAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
* * * * * *
826788 GGTAAAGAAATGA-TTTCTATGCAAAAGAAAACCATCAATAACATTTATCCTAATAAAGAGAATG
390 GGCAAAGAAAAGATTTTC-ATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATG
**
826852 TGTTTATAGTGCCCGATCTCAA
454 TGTTTATAGTGCCTAATCTC-A
* * * *
826874 AAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTAAACGATGAACTTAGACTTTGC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTAAGC-ATGAACTTAGGCTTTTC
* * * * * *
826939 AAAAATTGGAGGGAAGAAACCGTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTATGCA
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATG-A
* * * *** * *
827004 -AAGACTATGTTTGTGGTGCCT-ATTCTGGAAATGCGCGGGGATTAGTATGAGCATTCAAGTTTG
129 GAAGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTG
* * * * *
827067 TCTTTTTTAGGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGGTTCTCTCGCAACAC
193 TCTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAC
* * *
827132 CAAAGCATCAATGTCATGAATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAG
258 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
* * * **
827197 TGGAGACTTTTATGAGAATCAATGCTTTTCTCATTTAAAGGTCTAGGTTTGATTTTAAGGAAAAT
323 TGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
* ** * *
827262 AGGGCAAAGAAAAGATTTCCACACCAAAGGAAACCATCAATATCATTTATCCTAATGAGCAGAAT
388 AGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAAT
* *
827327 ATGTTTATAGTGCCAAATCTCA
453 GTGTTTATAGTGCCTAATCTCA
** * *
827349 AAACCAATCCAGATCATTGTTCGAATCCTTGTTTATCACTTTTAAGGCATGAACTTAGGCTTTTC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTAA-GCATGAACTTAGGCTTTTC
* * **
827414 AAAAATTGGTGGGAAGAAAGTGTTTCTTGCAAAAATAAAGCATCAATACCATGTATCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * * * *
827479 AACACTATGTTTGTGGTACCTAATCCTGAAAAAAATGTGGATTAGTATGAGTATTCATGTTTGTC
130 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* *
827544 TTATTTAAGAGATAAACTTTGATTCTATCAATAACAGTGGAAGAAAAGCTTCTCTTACGACACCA
195 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCA
* * * * * *
827609 AAGCATCAATGTCATGTGTCCTAATGAAGGGGATGTGTTTTTCGTTCCCAAACTTGAAATGATTG
260 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATG
* * * *
827674 GAGACTGTTACGAGAATCAATGCTTGTCTTATTTAA-GGTCAAAGTTTGATTTTAAGGAAAATAG
325 GAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
* * * * *
827738 GGTAAAGAAATGA-TTTCTATGCCAAAGAAAACCATCAATAACATTTATCCTAATAAAGAGAATG
390 GGCAAAGAAAAGATTTTC-ATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATG
**
827802 TGTTTATAGTGCCCGATCTCAA
454 TGTTTATAGTGCCTAATCTC-A
* * * * *
827824 AAACAAATGAAGATCATTGTTCGAATCCTTCTTTGTCTCTTTTAAAGGATGAACTTAGACTTTGC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* * * * * * *
827889 AAAAATTGGAGGGAAGAAACCGTTTCTTGCAAAACCAAAGCAGCAATATCGTGTATCCTTATGCG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * ** * *
827954 AAGACTATGTTTGTGGTGCCTAAT-CTGGAAATGAGCGGGGATTAGTATGAGCATTCAAGTTTGT
130 AAGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT
* * * * ** *
828018 CTTTTTTAGGAGATAAACTTTGATTCTATCAATAACGGGGGAAGAAAAGGTTCTCTCACAACACC
194 CTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACC
* *
828083 AAAGCATCAATGTCATGAATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAAT
259 AAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAAT
* * * * **
828148 GGAGACTTTTATGAGAATCAATGCTTTTCTCTTTTAAAGGTCTAGGTTTGATTTTAAGGAAAATA
324 GGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATA
* ** * * *
828213 GGGCAAAGAAAAGATTTCCACACCAAAGGAAACCATCAATATCATTTATCCTAATGAGCAGAATA
389 GGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATG
828278 TGTTTATAGTGCCTAATCTCA
454 TGTTTATAGTGCCTAATCTCA
** * * * *
828299 AAACCAATCCAGATCATTGTTTGAATCCTTGTTTATCACTTTTGAGGCATGAACTTAGGCTTTTC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* * **
828364 AAAAATTGGCGGGAAGAAAGTGTTTCTTGCGAAAATAAAGCATCAATACCATGTATCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * * * * *
828429 AACACTATGTTTGTGGTACCTAATCTTGAAAAAAATGTGGATTAGTATGAGTATTCATGTTTGTC
130 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
828494 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCA
195 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCA
* * * * * *
828559 AAGCATCAATGTCATGTGTCCTAATGAAGGGGATGTGTTTTTCGTTCCCAAACTTGAAATGATTG
260 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATG
* * * * *
828624 GAGACTGTTACGAGAATCAATGCTTGTCTTATTTAA-GGTTAAAGTTTGATTTTAAGGAAAATAG
325 GAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
* * * * *
828688 GGTAAAGAAATGA-TTTCTATGCCAATGAAAACCATCAATAACATTTATCCTAATGAAGAGAATG
390 GGCAAAGAAAAGATTTTC-ATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATG
**
828752 TGTTTATAGTGCCCGATCTCA
454 TGTTTATAGTGCCTAATCTCA
* * * * * * ** * *
828773 AAACAAATGAAAATCATTGTTCAAATGCTTGTTTGTCTCTTTTGAGGGACAAACTTAGACTTTAC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* * * * * * * *
828838 AAAAATTGGAGGGAAGAAA-CTGTTTCTTGCAAAACCAAAGGAACAATATCGTGTATCCCTATGC
65 AAAAATTGGTGGGAAGAAAGC-GTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGA
* * ** * *
828902 GAAGACTATGCTTGTGGTGCCTAAT-CTAGAAATA-AGCGGGGATTAGTATGAGCATTCAAGTTT
129 GAAGACTATGTTTATGGTGCCTAATCCT-GAAA-AGAATGGGGATTAGTATGAGTATTCATGTTT
* * * * * *
828965 GTCTTTTTTAAGAGATAAACTTTAATTCTATCAATAATGGTGGAAGAAAAGGTTCTCTCGCAACA
192 GTCTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACA
*
829030 CCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGA
257 CCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGA
* * **
829095 GTGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCTAGGTTTGATTTTAAGGAAAA
322 ATGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAA
* * ** * * *
829160 TAGGGTAAAGAAAAGATTTCCACACCAAAGGAAACCATCAATATTATTTATCCTAATGAGCAGAA
387 TAGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAA
* *
829225 TATGTTTATAGTTCCTAATCTCA
452 TGTGTTTATAGTGCCTAATCTCA
** * *
829248 AAACCAATCCAGATCATTATTCGAATCCTTGTTTATCTCTTTTAAGGCATGAACTTAGGCTTTTC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTAA-GCATGAACTTAGGCTTTTC
* * *
829313 AAAAATTGGAGGGAAGAAAGTGTTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * * * *
829378 AACACTATGTTTATGGTACCTAATCCTGAAAAAAATGTGGATTAATATGAGTATTCATGTTTGTC
130 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* * * * * *
829443 TAATTTAAGAGATAAACTTCGATTCTATCAATAATGGTGGAAGAAAAGCTACTCTCGCAACACCA
195 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCA
* * *
829508 AAGCATCAATGTCATGTATCCTAATGAAAGG-ATGTGTTTTTGGTTACCAATCTTGAAGAGAATG
260 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATG
* * ** *
829572 GAGACTTTTTTGAGAATCGATGCTTGTCTCATTTAAGGGTCTCAGTTTGATTTTAAGGAAAATAG
325 GAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAG
* *
829637 GGCAAAGAAAAGATTTTCACGCCAAAGTAAACCATCAATATCATTTATCCTAATGAGGAGAATGT
390 GGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGT
*
829702 GTTTATAGTGCCTAATCTTA
455 GTTTATAGTGCCTAATCTCA
* * *
829722 AAACGAATGAAGATCATTGTTCGATTCCTTGTTTGTCTCTTTTAAGGCATAAACTTAGGCTTTTC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTAA-GCATGAACTTAGGCTTTTC
* *
829787 AAAAATTGGTGGGAAGAAAGCGTTTCTTGTGAAACCAAAGCATCAATACCATGTATCCTTATGGG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * *
829852 AAGACTATGTTTATGGTACCTAAT-CTCGAAAAGAATGGAGATTAGTATGTGTATTCATGTTTGT
130 AAGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT
* * * *
829916 CTTATTTAAGAGATAAACTTTCATTCTATCAATAACAGTGGAAGAAAA-CTCCT-TTCGCAACAC
194 CTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTT-GCGACAC
* * * *
829979 CAAAACATCAATGTCATGTATCCTAAGGAAGGGAAAGTGTTTTCGGTTCCCAATCTTGAAAAGAA
258 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
* * *
830044 TGGAGACTTTTATGAGAATCAGTGCTTGTCTCATTTAAGGGTCAAACTTGGATTTTCAGGAAAAT
323 TGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
* * * *
830109 AGAGCAAAGAAAAGATTTTCATGCCAAAGGAAACCATCAATATCATTTATCCTAACGAGGAGATT
388 AGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAAT
*
830174 ATGTTTATAGTGCCTAATCTCA
453 GTGTTTATAGTGCCTAATCTCA
* * * * * *
830196 AAACCAATAAAGATCATTGCTCGAATCCATGTTTGTCTCTTTTGAGGCACGAGCTTAGGCTTTTC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* **
830261 AAAAATTTGTGGGAAGAAAGTATTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* *
830326 AAGACTATGTTTATGGTACCCAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
130 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* * * * * *
830391 TTGTTTAAGAGACAAACTTTGATTTTATCATTAACGGTGAAAAAAAAGCTTCTCTTGCGACACCA
195 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCA
* * * *
830456 AAGCATCAATGACATGTATCCTAATGAAGGAAATGAGTTTTT-GTATCCTAATCTTGAAAAGAAT
260 AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGT-TCCCAATCTTGAAAAGAAT
* * * * * *
830520 GGGGACTTTTACGAGAATCAATGCATGTGTCATTTAA-TGT-ATGAACTTTGGTTTTAAGGAAAA
324 GGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCA--AACTTTGATTTTAAGGAAAA
* * *
830583 TAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAA
387 TAGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAA
*
830648 TATGTTTATAGTGCCTAATCTCA
452 TGTGTTTATAGTGCCTAATCTCA
* * * *
830671 AAACCAATAAAGATCATTGCTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAGCTTAGGCTTTTC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* ** *
830736 AAAAATTTGTGGGAAGAAAGTATTTCTTGCGAAACCAAAGCATGAATACCATGTATCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * * ** * * * * *
830801 AAAACTATGTTTTTGGCGCCTAATCCTGAAAAGTCTAGGGCTTAG-ATTGGGCATTCATGTTTGC
130 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTA-TGAGTATTCATGTTTGT
* * * *
830865 CTTATTTAA-AGGATAAACCTTGATTCTATCAAAAACGGTGGAAGAGAAGCTTCTCTTGCGATAC
194 CTTATTTAAGA-GATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAC
*
830929 CAAAGCATCAATGTCATTTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
258 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
*
830994 TGGAGACTTTCATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
323 TGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
* * * * *
831059 AAGGCAAAGTAAAGATTTCCATGCCAAAGGAAACCATCAATATCATTTATCCTAATGAGGAGAAC
388 AGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAAT
*
831124 GTGTTTGTAGTGCCTAATCTCA
453 GTGTTTATAGTGCCTAATCTCA
* * * * *
831146 AAACCAATGAAGATCATTGTCCGAATCCTTGTTTGTCTTTTTTGAGGCATGAACTTGGGCTTTTG
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* * * *
831211 AAAAATTGGTGGGAAGAAAGTGTTTCTTACTAAACCAAAGCGTCAATACCATGTATCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * *
831276 AAGACTGTGTTTGTGGTGCCTAATCCT-AAAATGAATGGGGATTAGTATGAGTATTCACGTTTGT
130 AAGACTATGTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTGT
* * * * * *
831340 TTTGTTTAAGAGACAAACTTTAATTCTATCAATAACGGTGGAAGAAAAGCTTCACTTGCGACATC
194 CTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACC
* * * *
831405 AAAGCATCAATGTCATGTATCCTAACGAAGGGAATGTGCTTTCGGCTCCCAATCTTGAAAAGAAT
259 AAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAAT
* * *
831470 GGAGACTTTTATGATAATCAATGCTTGTCTCATATAAGGGTCAAACTTTGATTTAAAGGAAAATA
324 GGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATA
* *
831535 GGGCAAAGAGAAGATTTTCATGGCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATG
389 GGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATG
831600 TGTTTATAGTGCCTAAT-TACA
454 TGTTTATAGTGCCTAATCT-CA
** ** ** * * * *
831621 AAATGAATGAAGATCCCTACTAGAAT-CTATGTTTGTGTCATTCAAGGCATGAACTTAGGCTTTT
1 AAACCAATGAAGATCATTGTTCGAATCCT-TGTTTGTCTCTTTTAA-GCATGAACTTAGGCTTTT
* * ** * *
831685 CAAATATTGGTGGGAAGAAAGCGTTTTTTATGAAACCAAAGCATCAATACCATGTATGCTTGTGA
64 CAAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGA
* * * * *
831750 GAAGATTATGTTTATAGTACCTAATCCT-AAAAGGAATGGGGATTAGTATGAGCATTCATATTTG
129 GAAGACTATGTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTG
* * * * *
831814 TCTTATTTAATAGAAAAACTTTGATTCTATCAATAACAGTGGAAAGAAAAGCTTTTCTTGCAACA
193 TCTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTTGCGACA
* ** * **
831879 CCAAAGCGTCAATGTCATGTATGTTAATGAAGGGAATGTATTTTTGGTTCTTAATCTTGAAAAG-
257 CCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGA
* * * *
831943 ATGGGAGACTGTTATGAGAATCATTGCTTGTCTTATTTAAGGGTCAAACTTTGATTTTAAGGAGA
322 AT-GGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAA
* * * * *
832008 ATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAATCCTTCAATAACATTTATCCTAATGAGGAAA
386 ATAGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGA
* * *
832073 ATGTATTTATAGTG-CTCGATATCA
451 ATGTGTTTATAGTGCCT-AATCTCA
* * * * * * * *
832097 AAACAAATGAAGATCATTGTTCGAATCCTCGTTTGTCTCCTTTGAGGGACGAACTT-CGATTTTA
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCT-CTTTTAAGCATGAACTTAGGCTTTT-
* * * * * * * * *
832161 CAAAAATTTGAGGGAAGCAATCGTTTCTTGCCAAACCAAAGCAACAATATCTTGTATCCTTATGT
64 CAAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGA
* * * * * * * ** *
832226 GAAGACTATATTTGTGGTGCGTAATCTTGAAATGAGTGGGGATTAGTATGAGCATTCAACTTTCT
129 GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT
* * * * * * * *
832291 CTTTTTTAAGAGACAAA-TATTGATTCTATTAAAAACGATGGAAGAAACGCTTCTCTCGAGACAC
194 CTTATTTAAGAGATAAACT-TTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAC
832355 CAAAGCATCAATGTCATGTAT-CTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
258 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
*
832419 TGGAGACTTTTATGAGAATCAATGCTTGCCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
323 TGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
* * *
832484 AGGGCAAAGAAAAGATTTTCACGCCAAAGGAAACCATCAATATCATTTATCATAATGAGGAGAAT
388 AGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAAT
* *
832549 ATGTTTATAGTGCCTAATTTCA
453 GTGTTTATAGTGCCTAATCTCA
* * *
832571 AAACCAATAAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAGGCATGAACTTCGGCTTTTC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* **
832636 AAAAATTGGTGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACGGTGTATCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
** * *
832701 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGTCTGGGGCTTAGTATGAGTATCCATGTTTGTC
130 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* ** * * * *
832766 TTATTTAAGAGATAAACTTTGATTCTATCAATAATAGCAGAAAGAAAACCTTCTCGTGTGACGA-
195 TTATTTAAGAGATAAACTTTGATTCTATCAATAA-CGGTGGAAGAAAAGCTTCTCTTGCGAC-AC
*
832830 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAA
258 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
**
832895 TGGAGACTTTTACAAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
323 TGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
* * * * * *
832960 GGGGAAAAGAAAAGATTTCCATGCCAAAGAAAACTATCAATATTCATTTATCCTAATAAGGAAAA
388 AGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATA-TCATTTATCCTAATGAGGAGAA
*
833025 TGTGTTTATAGCGCCTAATCTCA
452 TGTGTTTATAGTGCCTAATCTCA
* *
833048 AAACCAGTGAAGATCATTATTCGAATCCTTGTTTGTCTCTTTTAAAGCATGAACTTAGGCTTTTC
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* * * *
833113 AAAAATTGGTGGGAAGAAAGCGTTTCTTGTGAAACCAAAGCATCAATACTAGGTGTCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * * * * *
833178 AA-ACTATGTTTATGGTGCCTAATCTTGAAAAAAATAGGGATTCGCATGAGTATTCATGTTTATC
130 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* * * * * *
833242 TTATTTAAGAG--AAATTTTGATTCTATCAATAACAGTGGAAAAAAAAGCTTCTCTTACAACACT
195 TTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTTGCGACACC
* * * * * *
833305 AAAGCATCAATGTTATGTAACCTAATGAAGGGAATGTATTTTTGGTTCTCAATCTTGAAGAGATT
259 AAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAAT
* * * *
833370 GAAGACTGTTATGAGAATCAATGCTTGTTCTTATTTAAGGGTTAAACTTTGATTTTAAGGAAAAT
324 GGAGACTTTTATGAGAATCAATGCTTG-TCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
* * * *
833435 AGGGCGAAGAAAAG-TTTTCTATGCCAGAA-AAAACCATCAATTTCATTTATCTTAATAAGGAGA
388 AGGGCAAAGAAAAGATTTTC-ATGCCA-AAGAAAACCATCAATATCATTTATCCTAATGAGGAGA
833498 ATGTGTTTATAGTGCCTAAT-TGCA
451 ATGTGTTTATAGTGCCTAATCT-CA
** * * * * * * * *
833522 AAATGAATGAAGATCCTTGCTAGAAT-CTATGTTTATGTCATTCAATGCATGAACTTAGGCTTTG
1 AAACCAATGAAGATCATTGTTCGAATCCT-TGTTTGTCTCTTTTAA-GCATGAACTTAGGCTTTT
* * * * * * *
833586 CAAAAATTGGTGGGAAGAAAGCGTTTCCTGTGAATCCAAGGTATCAATACCGTGTATCCTTGTGA
64 CAAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGA
* * * * *
833651 GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTACTATAAGCATTCATGTATAT
129 GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGT
* * * *
833716 CTTATTTAAGAGATAAACTTTGATTCTATCAATACCAGTGGAAAGAAAAGCTTTTCTTGCAACAC
194 CTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGG-AAGAAAAGCTTCTCTTGCGACAC
* * *
833781 CAAAGCATCAATGTCATGTATCTTAATGAAAGGGAATGTATTTTTGGTTCCTAATCTTGAAAAG-
258 CAAAGCATCAATGTCATGTATCCTAATG-AAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGA
* ** * * * * * *
833845 ATGGGAAACAGTTACGAGAATCAAAGCTTGTCTTATTTAAAGGTCAACCTTTGATTTTAAGGAGA
322 AT-GGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAA
* * *
833910 ATAGGGCAAAGAAAAGATTTCCATGCCAAAGAAAATCACCAATATCATTTATCCTAATGAGGAGA
386 ATAGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGA
** *
833975 ACATG--T-T--TG--T-AGCTCA
451 ATGTGTTTATAGTGCCTAATCTCA
* ** * * * *
833991 AAACCAATAAAGATCATTGTTCGAAAACTTGTTTGTCACTTTTGAGGCATGAACTTTGGCTTTTG
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTT-AAGCATGAACTTAGGCTTTTC
* * *
834056 AAAAATTGGAGGGAAGAAAGTGTTTCTTGCGAAACCAAAGCATCAATACCATATATCCTTATGAG
65 AAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAG
* * *
834121 AAGACTGTG-TTAGTGGTGCCTAATCGT-AAAATGAATGGGGATTAGTATGAGTATTCAAGTTTG
130 AAGACTATGTTTA-TGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGAGTATTCATGTTTG
* * * * *
834184 TCTTATTTAAGAGATAAAATATGATTCTATCAACAACGGTGGAAGAGAAGCTTCTCTTGCGGCAC
193 TCTTATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACAC
* * * *
834249 CAAAGCATCAATGTCATGTATCCTAACGAAGGGAATGCGCTTTTGGTTCTCAATCTTGAAAAGAA
258 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA
** *
834314 TGGAGACTTCAATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTAAAGGAAAAT
323 TGGAGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAAT
* * *
834379 AAGGCAAAGAGAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAAAGAGGAGAAT
388 AGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAAT
*
834444 GTGTTTATAGTGTCTAATCTCCA
453 GTGTTTATAGTGCCTAATCT-CA
* * * *
834467 AAA-CAATAAAGATCATTGTTCGAATCCTTGCTTGTC-CGATTTGAGGCATGAACTTAGGCTTTT
1 AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTC--TTTTAAGCATGAACTTAGGCTTTT
*
834530 CAAAAATTGGTGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAATAC
64 CAAAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATAC
834580 TGAAAGCTTA
Statistics
Matches: 7830, Mismatches: 1191, Indels: 222
0.85 0.13 0.02
Matches are distributed among these distances:
467 142 0.02
468 54 0.01
469 186 0.02
470 6 0.00
472 5 0.00
473 66 0.01
474 1988 0.25
475 3817 0.49
476 1174 0.15
477 334 0.04
478 58 0.01
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (474 bp):
AAACCAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTAAGCATGAACTTAGGCTTTTCA
AAAATTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGA
AGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCT
TATTTAAGAGATAAACTTTGATTCTATCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAA
AGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGG
AGACTTTTATGAGAATCAATGCTTGTCTCATTTAAGGGTCAAACTTTGATTTTAAGGAAAATAGG
GCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTG
TTTATAGTGCCTAATCTCA
Found at i:826647 original size:158 final size:155
Alignment explanation
Indices: 825036--834369 Score: 2009
Period size: 158 Copynumber: 59.0 Consensus size: 155
825026 CTTAGGCTTT
* * *
825036 TCAAAAATTGGTGGGAAGAAAGTGC-TTT-TTGCGAAACCAAAGCATCAATACCATGTATCCTTA
1 TCAAAAA-TGGT-GGAAGAAA-AGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * *
825099 TAAGAAGACTATGTTTATGGTACCTAATCCTGAAAACAATATG-GATTAGTATGAGTATTCATGT
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAAT-GGAGATTAGTATGAG-ATTCATGT
825163 TTGTCTTATTTAA-GAGTAAAACTTTGATTCTA
126 TTGTCTTATTTAAGGA-T-AAACTTTGATT-TA
* * * * * * *
825195 TCAATAACGGCGGAAGAAAAGCTTCTCTTACGACACCAAAGCATCAATGTCATGTATCCTAATGA
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
* * * * * * * ** * *
825260 -AGGGAATGTGTTTTTGGTTCCTAATCTTGAAAAAAATGGAGACTT-TTACAAGAATCAATGCTT
66 GA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATGTTT
* * *
825323 GTCTCATTTAAGGGTCAAACTTCGATTTAA
128 GTCTTATTTAAGGAT-AAACTTTGATTT-A
* * * * * * * * ** * * *
825353 ACGAAAATAGG-GCAAAAAGAAGATTTCCATGCCAAAAAAAACCATCGATATCATTTATCCTAAT
1 TCAAAAAT-GGTGGAAGAA-AAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * * * * * * *** ** * *
825417 GAGGAGAATGTGCTTATAGTGCTTAATGAC--AAAATGAATGAAGATCCTTACCAGAATCAATAT
64 GAGAAGAATATGTTTATGGTGCCTAAT-CCTGAAAA-GAATGGAGATTAGTATGAGATTC-ATGT
* * *
825480 TTGTGTCATTTAAGGCA-AGAACTTTG-TCTTT
126 TTGTCTTATTTAAGG-ATA-AACTTTGAT-TTA
* * * * * **
825511 TGAAAAATTCGTGGGAAG-AAAGCGTTTCTTGTGAAACCAAAGCATCAATACCATGTATCCTTGT
1 TCAAAAA-TGGT-GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* *
825575 GAGAA-AACTATGTTTATAGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTT
64 GAGAAGAA-TATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGAG-ATTCATGTT
*
825639 TGTTTTATTTAAGAGATAAACTTTGATTCTA
127 TGTCTTATTTAAG-GATAAACTTTGATT-TA
* ** * * ** * * * *
825670 TCAATAACAGTGGAAAGAAAAACTTTTCTTGTGATGCCAAAACATCAATGTCATGTATCTTAAAG
1 TCAAAAATGGTGG-AAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATG
* * * * * * * *
825735 A-AAGAA-ATGAATTTTTGGTTCCTAATCTTGAAAAGATTGGATACT-GTTATGAGAATCAATGC
65 AGAAGAATATG--TTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGAGATTC-ATGT
* *
825797 TTGTCTTATTTACGGGTCAAACTTTGATTTTA
126 TTGTCTTATTTAAGGAT-AAACTTTGA-TTTA
** * ** * ** * * *
825829 TGGAAAATAGG-GTAAAGAAAAG-AATTCTATGCTAAAGAAAACCATCAATAACATTTATCCTAA
1 TCAAAAAT-GGTG-GAAGAAAAGCTTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * ** * * * * * ***
825892 TAAAAAGAATGTGTTTATAGTGCCCGAT-CTAAAAACAAAT-GACGATCATTGCTCGA-ATAGTT
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGA-GATTAGT-AT-GAGATTCAT
* * *
825954 GTTTGTCTCT-TTTAAGCAATGAACTTAGACTTTA
124 GTTTGTCT-TATTTAAG-GATAAACTTTGA-TTTA
* * * * * * * * * *
825988 -CAAAAATTGGAGGGAAG-AAACCATATCCTGCAAAACAAAAGCAACAATATCGTGTATCCTTAT
1 TCAAAAA-TGG-TGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * * * * * * *
826051 GTGAAGACTATGTTTGTGGTGCCTAAT-CTAGAAATGAGTGGGGATTAGCATGAGCATTCAAGTT
64 GAGAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGAG-ATTCATGTT
*
826115 TGTCTTTTTTAAGAGATAAACTTTGATTCTA
127 TGTCTTATTTAAG-GATAAACTTTGATT-TA
* * * * * ** * *
826146 TCAATAACGATGGAAGAAATGGTTTTCTCAC-AACACCAAAGCATCAATGTCATGTATCCTAACG
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATG
* * * * * * * * * * *
826210 A-AGGGAGTGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTT-TTATGAGAATCAATGCT
65 AGA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATGTT
* * * *
826273 TGTCTCATTTAAGGGTCTAAGTTTGATTTTA
127 TGTCTTATTTAAGGAT-AAACTTTGA-TTTA
** * * ** * ** * * * *
826304 TGGAAAATAGG-GCAAAGAAAAGATTTTCACGCTAAAGGAAACCGTCAATATCGTTTATCCTAAT
1 TCAAAAAT-GGTG-GAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * * * * * ** * * * * *
826368 GAGGAGAATGTATTTATAGTTCCTAAT-CTCACAACCAATGAAGATCATTGTTTGA-ATCCTTGT
64 GAGAAGAATATGTTTATGGTGCCTAATCCTGA-AAAGAATGGAGAT--TAGTATGAGATTCATGT
* * *
826431 TTGTCTCT-TTTAAGGCATGAACTTAGGCTTT-
126 TTGTCT-TATTTAAGG-ATAAACTT-TGATTTA
* ** * * *
826462 TTAAAAATTAGCAGGAAG-AAAGTTTTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTAT
1 TCAAAAA-T-GGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * *
826526 GAGAAGACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTT
64 GAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGAG-ATTCATGTTT
826591 GTCTTATTTAAGAGATAAACTTTGATTCTA
128 GTCTTATTTAAG-GATAAACTTTGATT-TA
* * * * * * *
826621 TCAATAACGGTGGAAGAAAAGCTTTTCCTGCGACACCAAAGCATCAATGTCATATGTCCTAATGA
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
* * * * * * * * * * * *
826686 -AGGGAATGTGTTTTTGGTTCCCAATCTTGAAATGATTGGAGACT-GTTACGAGAATCAATGCTT
66 GA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGAGATTC-ATGTTT
*
826749 GTCTTATTTAAGG-TCAAAGTTTGATTT-
128 GTCTTATTTAAGGAT-AAACTTTGATTTA
* * * * * ** * * *
826776 TAAGGAAAATAGG-GTAAAGAAATG-ATTTCTATGCAAAAGAAAACCATCAATAACATTTATCCT
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCCT
* * * ** * * * *
826839 AAT-AAAGAGAATGTGTTTATAGTGCCCGAT-CTCAAAAACAAATGAAGATCATTGT-TCGA-AT
61 AATGAGA-AGAATATGTTTATGGTGCCTAATCCT-GAAAA-GAATGGAGAT--TAGTAT-GAGAT
* * * * *
826900 CCTTGTTTGTCTCT-TTTAAACGATGAACTTAGACTTT-
120 TCATGTTTGTCT-TATTT-AAGGATAAACTTTGA-TTTA
* * * * * * * *
826937 GCAAAAATTGGAGGGAAG-AAACCGTTTCTTGCAAAACCAAAGCAACAATATCGTGTATCCTTAT
1 TCAAAAA-TGG-TGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * * * *** * *
827001 GCA-AAGACTATGTTTGTGGTGCCT-ATTCTGGAAATGCGCGGGGATTAGTATGAGCATTCAAGT
64 G-AGAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGAG-ATTCATGT
* *
827064 TTGTCTTTTTTAGGAGATAAACTTTGATTCTA
126 TTGTCTTATTTAAG-GATAAACTTTGATT-TA
* * * * * * *
827096 TCAATAACGGTGGAAGAAAAGGTTCTCTCGC-AACACCAAAGCATCAATGTCATGAATCCTAATG
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATG
* * * * * * * * * *
827160 A-AGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAGTGGAGACTT-TTATGAGAATCAATGCT
65 AGA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATG-T
* * **
827223 TT-TCTCATTTAAAGG-TCTAGGTTTGATTT-
126 TTGTCTTATTT-AAGGAT-AAACTTTGATTTA
* * * * *** * ** * *
827252 TAAGGAAAATAGG-GCAAAGAAAAGATTTCCACACCAAAGGAAACCATCAATATCATTTATCCTA
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * * ** * * *
827316 ATGAGCAGAATATGTTTATAGTGCCAAAT-CTCAAAACCAATCCAGATCATTGT-TCGA-ATCCT
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGAT--TAGTAT-GAGATTCA
* * * * *
827378 TGTTTATCACT-TTTAAGGCATGAACTTAGGCTTT-
123 TGTTTGTC-TTATTTAAGG-ATAAACTT-TGATTTA
* ** * *
827412 TCAAAAATTGGTGGGAAG-AAAG-TGTTTCTTGCAAAAATAAAGCATCAATACCATGTATCCTTA
1 TCAAAAA-TGGT-GGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * *
827475 TGAGAACACTATGTTTGTGGTACCTAATCCTGAAAAAAATGTG-GATTAGTATGAGTATTCATGT
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATG-GAGATTAGTATGAG-ATTCATGT
827539 TTGTCTTATTTAAGAGATAAACTTTGATTCTA
126 TTGTCTTATTTAAG-GATAAACTTTGATT-TA
* ** * * * * *
827571 TCAATAACAGTGGAAGAAAAGCTTCTCTTACGACACCAAAGCATCAATGTCATGTGTCCTAATGA
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
* * * * * * * * * * * * * * *
827636 -AGGGGATGTGTTTTTCGTTCCCAAACTTGAAATGATTGGAGACT-GTTACGAGAATCAATGCTT
66 GA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGAGATTC-ATGTTT
*
827699 GTCTTATTTAAGG-TCAAAGTTTGATTT-
128 GTCTTATTTAAGGAT-AAACTTTGATTTA
* * * * * ** * * *
827726 TAAGGAAAATAGG-GTAAAGAAATG-ATTTCTATGCCAAAGAAAACCATCAATAACATTTATCCT
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCCT
* * * ** * * * *
827789 AAT-AAAGAGAATGTGTTTATAGTGCCCGAT-CTCAAAAACAAATGAAGATCATTGT-TCGA-AT
61 AATGAGA-AGAATATGTTTATGGTGCCTAATCCT-GAAAA-GAATGGAGAT--TAGTAT-GAGAT
* * * * *
827850 CCTTCTTTGTCTCT-TTTAAAGGATGAACTTAGACTTT-
120 TCATGTTTGTCT-TATTT-AAGGATAAACTTTGA-TTTA
* * * * * * * *
827887 GCAAAAATTGGAGGGAAG-AAACCGTTTCTTGCAAAACCAAAGCAGCAATATCGTGTATCCTTAT
1 TCAAAAA-TGG-TGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * * * ** * *
827951 GCGAAGACTATGTTTGTGGTGCCTAAT-CTGGAAATGAGCGGGGATTAGTATGAGCATTCAAGTT
64 GAGAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGAG-ATTCATGTT
* *
828015 TGTCTTTTTTAGGAGATAAACTTTGATTCTA
127 TGTCTTATTTAAG-GATAAACTTTGATT-TA
* * * * * ** * *
828046 TCAATAACGGGGGAAGAAAAGGTTCTCTCAC-AACACCAAAGCATCAATGTCATGAATCCTAATG
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATG
* * * * * * * * *
828110 A-AGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAATGGAGACTT-TTATGAGAATCAATGCT
65 AGA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATG-T
* **
828173 TT-TCTCT-TTTAAAGG-TCTAGGTTTGATTT-
126 TTGTCT-TATTT-AAGGAT-AAACTTTGATTTA
* * * * *** * ** * *
828202 TAAGGAAAATAGG-GCAAAGAAAAGATTTCCACACCAAAGGAAACCATCAATATCATTTATCCTA
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * ** * * * *
828266 ATGAGCAGAATATGTTTATAGTGCCTAAT-CTCAAAACCAATCCAGATCATTGTTTGA-ATCCTT
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGAT--TAGTATGAGATTCAT
* * * * * *
828329 GTTTATCACT-TTTGAGGCATGAACTTAGGCTTT-
124 GTTTGTC-TTATTTAAGG-ATAAACTT-TGATTTA
* ** * *
828362 TCAAAAATTGGCGGGAAG-AAAG-TGTTTCTTGCGAAAATAAAGCATCAATACCATGTATCCTTA
1 TCAAAAA-TGG-TGGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * * *
828425 TGAGAACACTATGTTTGTGGTACCTAATCTTGAAAAAAATGTG-GATTAGTATGAGTATTCATGT
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATG-GAGATTAGTATGAG-ATTCATGT
828489 TTGTCTTATTTAAGAGATAAACTTTGATTCTA
126 TTGTCTTATTTAAG-GATAAACTTTGATT-TA
* * * * * *
828521 TCAATAACGGTGGAAGAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTGTCCTAATGA
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
* * * * * * * * * * * * * * *
828586 -AGGGGATGTGTTTTTCGTTCCCAAACTTGAAATGATTGGAGACT-GTTACGAGAATCAATGCTT
66 GA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGAGATTC-ATGTTT
* *
828649 GTCTTATTTAAGGTTAAAGTTTGATTT-
128 GTCTTATTTAAGGATAAACTTTGATTTA
* * * * * *** * * *
828676 TAAGGAAAATAGG-GTAAAGAAATG-ATTTCTATGCCAATGAAAACCATCAATAACATTTATCCT
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCCT
* * ** * * * * * * * *
828739 AATGA-AGAGAATGTGTTTATAGTGCCCGAT-CTCAAAACAAATGAAAATCATTGT-TCAAATGC
61 AATGAGA-AGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGAT--TAGTATGAGATTC
* * * *
828801 TTGTTTGTCTCT-TTTGAGGGACAAACTTAGACTTTA
122 ATGTTTGTCT-TATTT-AAGGATAAACTTTGA-TTTA
* * * * *
828837 -CAAAAATTGGAGGGAAG-AAA-CTGTTTCTTGCAAAACCAAAGGAACAATATCGTGTATCCCT-
1 TCAAAAA-TGG-TGGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATATCATGTAT-CCTA
* * * * ** * *
828898 ATGCGAAGACTATGCTTGTGGTGCCTAAT-CTAGAAATA-AGCGGGGATTAGTATGAGCATTCAA
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCT-GAAA-AGAATGGAGATTAGTATGAG-ATTCAT
* *
828961 GTTTGTCTTTTTTAAGAGATAAACTTTAATTCTA
124 GTTTGTCTTATTTAAG-GATAAACTTTGATT-TA
* * * * *
828995 TCAATAATGGTGGAAGAAAAGGTTCTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATG
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATG
* * * * * * * * * * *
829059 A-AGGGAATGTGTTTTTGGTTCCCAATCTTGAAGAGAGTGGAGACTT-TTATGAGAATCAATGCT
65 AGA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATGTT
* * * **
829122 TGTCTCATTTAAGGGTCTAGGTTTGATTT-
127 TGTCTTATTTAAGGAT-AAACTTTGATTTA
* * * * *** * ** * * *
829151 TAAGGAAAATAGG-GTAAAGAAAAGATTTCCACACCAAAGGAAACCATCAATATTATTTATCCTA
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * * ** * * * *
829215 ATGAGCAGAATATGTTTATAGTTCCTAAT-CTCAAAACCAATCCAGATCATTATTCGA-ATCCTT
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGATTAGTA-T-GAGATTCAT
* * * *
829278 GTTTATCTCT-TTTAAGGCATGAACTTAGGCTTT-
124 GTTTGTCT-TATTTAAGG-ATAAACTT-TGATTTA
* * * *
829311 TCAAAAATTGGAGGGAAG-AAAG-TGTTTCTTGCGAAACTAAAGCATCAATACCATGTATCCTTA
1 TCAAAAA-TGG-TGGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * *
829374 TGAGAACACTATGTTTATGGTACCTAATCCTGAAAAAAATGTG-GATTAATATGAGTATTCATGT
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATG-GAGATTAGTATGAG-ATTCATGT
* *
829438 TTGTCTAATTTAAGAGATAAACTTCGATTCTA
126 TTGTCTTATTTAAG-GATAAACTTTGATT-TA
* ** * *
829470 TCAATAATGGTGGAAGAAAAGCTACTCTCGC-AACACCAAAGCATCAATGTCATGTATCCTAATG
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATG
* * * * * * * * * *
829534 A-AAGGATGTGTTTTTGGTTACC-AATCTTGAAGAGAATGGAGACTT-TTTTGAGAATCGATGCT
65 AGAAGAATATGTTTATGG-TGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATGTT
* * ** *
829596 TGTCTCATTTAAGGGTCTCAGTTTGATTT-
127 TGTCTTATTTAAGGAT-AAACTTTGATTTA
* * * ** * ** * *
829625 TAAGGAAAATAGG-GCAAAGAAAAGATTTTCACGCCAAAGTAAACCATCAATATCATTTATCCTA
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * * * * * ** *
829689 ATGAGGAGAATGTGTTTATAGTGCCTAAT-CTTAAAACGAATGAAGATCATTGTTCGATTCCTTG
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGATTAGTATGAGATT-CATG
* *
829753 TTTGTCTCT-TTTAAGGCATAAACTTAGGCTTT-
125 TTTGTCT-TATTTAAGG-ATAAACTT-TGATTTA
* * * *
829785 TCAAAAATTGGTGGGAAG-AAAGCGTTTCTTGTGAAACCAAAGCATCAATACCATGTATCCTTAT
1 TCAAAAA-TGGT-GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * * *
829849 GGGAAGACTATGTTTATGGTACCTAAT-CTCGAAAAGAATGGAGATTAGTATGTGTATTCATGTT
64 GAGAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGAG-ATTCATGTT
*
829913 TGTCTTATTTAAGAGATAAACTTTCATTCTA
127 TGTCTTATTTAAG-GATAAACTTTGATT-TA
* ** * *
829944 TCAATAACAGTGGAAGAAAA-CTCCTTTC--GC-AACACCAAAACATCAATGTCATGTATCCTAA
1 TCAAAAATGGTGGAAGAAAAGCT--TTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAA
* * * * *
830005 -G-GAAGGGAA-AGTGTTT-TCGGTTCCCAATCTTGAAAAGAATGGAGACTT-TTATGAGAATCA
63 TGAGAA--GAATA-TGTTTAT-GGTGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTCA
* * * *
830065 GTGCTTGTCTCATTTAAGGGTCAAACTTGGATTT-
123 -TGTTTGTCTTATTTAAGGAT-AAACTTTGATTTA
* * * * * * ** * *
830099 TCAGGAAAATAGAGCAAAGAAAAGATTTTCATGCCAAAGGAAACCATCAATATCATTTATCCTAA
1 TCA--AAAATGGTG-GAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * * * ** * * * *
830164 CGAGGAGATTATGTTTATAGTGCCTAAT-CTCAAAACCAATAAAGATCATTGCTCGA-ATCCATG
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGATTAGT-AT-GAGATTCATG
* ** * * *
830227 TTTGTCTCT-TTTGAGGCACGAGCTTAGGCTTT-
125 TTTGTCT-TATTTAAGG-ATAAACTT-TGATTTA
* * *
830259 TCAAAAATTTGTGGGAAG-AAAG-TATTTCTTGCGAAACCAAAGCATCAATACCATGTATCCTTA
1 TCAAAAA-TGGT-GGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * *
830322 TGAGAAGACTATGTTTATGGTACCCAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTT
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGAG-ATTCATGTT
* *
830387 TGTCTTGTTTAAGAGACAAACTTTGATTTTA
127 TGTCTTATTTAAG-GATAAACTTTGA-TTTA
** * * * * *
830418 TCATTAACGGTGAAAAAAAAGCTTCTCTTGCGACACCAAAGCATCAATGA-CATGTATCCTAATG
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAAT-ATCATGTATCCTAATG
* * * * * * * *
830482 A-AGGAA-ATGAGTTT-TTGTATCCTAATCTTGAAAAGAATGGGGACTT-TTACGAGAATCAATG
65 AGAAGAATAT--GTTTATGGT-GCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATG
** * * * * *
830543 CATGTGTCATTTAATGTATGAACTTTGGTTT-
125 TTTGTCTTATTTAA-GGATAAACTTTGATTTA
* ** * * * * ** * *
830574 TAAGGAAAATAAGG-CAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATATCATTTATCCTA
1 TCA--AAAAT--GGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * ** * * * * *
830638 ATGAGGAGAATATGTTTATAGTGCCTAAT-CTCAAAACCAATAAAGATCATTGCTCGA-ATCCTT
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGATTAGT-AT-GAGATTCAT
* * * * *
830701 GTTTGTCTCT-TTTGAGGCATGAGCTTAGGCTTT-
124 GTTTGTCT-TATTTAAGG-ATAAACTT-TGATTTA
* * * *
830734 TCAAAAATTTGTGGGAAG-AAAG-TATTTCTTGCGAAACCAAAGCATGAATACCATGTATCCTTA
1 TCAAAAA-TGGT-GGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * ** * *
830797 TGAGAA-AACTATGTTTTTGGCGCCTAATCCTGAAAAGTCTAGG-GCTTAG-ATTGGGCATTCAT
63 TGAGAAGAA-TATGTTTATGGTGCCTAATCCTGAAAAGAAT-GGAGATTAGTA-TGAG-ATTCAT
* *
830859 GTTTGCCTTATTTAAAGGATAAACCTTGATTCTA
124 GTTTGTCTTATTT-AAGGATAAACTTTGATT-TA
* * * * * *
830893 TCAAAAACGGTGGAAGAGAAGCTTCTCTTGCGATACCAAAGCATCAATGTCATTTATCCTAATGA
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
* * * * * * * *
830958 -AGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTT--TCATGAGAATCAATGCT
66 GA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGA-TTAGT-ATGAGATTC-ATGTT
* *
831020 TGTCTCATTTAAGGGTCAAACTTTGATTT-
127 TGTCTTATTTAAGGAT-AAACTTTGATTTA
* ** * * * * * ** * *
831049 TAAGGAAAATAAGG-CAAAGTAAAGATTTCCATGCCAAAGGAAACCATCAATATCATTTATCCTA
1 TCA--AAAAT--GGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* ** * * * * * * ** * *
831113 ATGAGGAGAACGTGTTTGTAGTGCCTAAT-CTCAAAACCAATGAAGATCATTGTCCGA-ATCCTT
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGAT--TAGTATGAGATTCAT
* * * * *
831176 GTTTGTCTTTTTTGAGGCATGAACTTGGGCTTT-
124 GTTTGTCTTATTTAAGG-ATAAACTT-TGATTTA
* * * * * *
831209 TGAAAAATTGGTGGGAAG-AAAG-TGTTTCTTACTAAACCAAAGCGTCAATACCATGTATCCTTA
1 TCAAAAA-TGGT-GGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * *
831272 TGAGAAGACTGTGTTTGTGGTGCCTAATCCT-AAAATGAATGGGGATTAGTATGAGTATTCACGT
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGATTAGTATGAG-ATTCATGT
* * * *
831336 TTGTTTTGTTTAAGAGACAAACTTTAATTCTA
126 TTGTCTTATTTAAG-GATAAACTTTGATT-TA
* * ** * * * *
831368 TCAATAACGGTGGAAGAAAAGCTTCACTTGCGACATCAAAGCATCAATGTCATGTATCCTAACGA
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
* * * * * * * * *
831433 -AGGGAATGTGCTTT-CGGCT-CCCAATCTTGAAAAGAATGGAGACTT-TTATGATAATCAATGC
66 GA-AGAATATG-TTTATGG-TGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATGT
* * *
831494 TTGTCTCATATAAGGGTCAAACTTTGATTTA
126 TTGTCTTATTTAAGGAT-AAACTTTGATTTA
* * * * * ** * *
831525 -AAGGAAAATAGG-GCAAAGAGAAGATTTTCATG-GCAAAGAAAACCATCAATATCATTTATCCT
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCTTGCG-AAACCAAAGCATCAATATCATGTATCCT
* * * * * *** *
831587 AATGAGGAGAATGTGTTTATAGTGCCTAAT--TACAAAATGAATGAAGATCCCTACT-AGAATCT
61 AATGAGAAGAATATGTTTATGGTGCCTAATCCT-GAAAA-GAATGGAGATTAGTA-TGAGATTC-
* * * * * *
831649 ATGTTTGTGTCATTCAAGGCATGAACTTAGGCTTT-
122 ATGTTTGTCTTATTTAAGG-ATAAACTT-TGATTTA
* ** * * **
831684 TCAAATATTGGTGGGAAG-AAAGCGTTTT-TTATGAAACCAAAGCATCAATACCATGTATGCTTG
1 TCAAA-AATGGT-GGAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * *
831747 TGAGAAGATTATGTTTATAGTACCTAATCCT-AAAAGGAATGGGGATTAGTATGAGCATTCATAT
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGATTAGTATGAG-ATTCATGT
* *
831811 TTGTCTTATTTAATAGAAAAACTTTGATTCTA
126 TTGTCTTATTTAA-GGATAAACTTTGATT-TA
* ** * * **
831843 TCAATAACAGTGGAAAGAAAAGCTTTTCTTGC-AACACCAAAGCGTCAATGTCATGTATGTTAAT
1 TCAAAAATGGTGG-AAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAAT
* * * * * * * * *
831907 GA-AGGGAATGTATTTTTGGTTCTTAATCTTGAAAAG-ATGGGAGACT-GTTATGAGAATCATTG
64 GAGA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAAT-GGAGATTAG-TATGAGATTCA-TG
* *
831969 CTTGTCTTATTTAAGGGTCAAACTTTGATTT-
125 TTTGTCTTATTTAAGGAT-AAACTTTGATTTA
* * * * * * * * * *
832000 T-AAGGAGAATAGG-GCAAAGAAAAGATTTCCATGCCAAA-GAAATCCTTCAATAACATTTATCC
1 TCAA--A-AAT-GGTG-GAAGAAAAGCTTTTCTTGCGAAACCAAA-GCATCAATATCATGTATCC
* * * * * * * * * ** *
832062 TAATGAGGAA-AATGTATTTATAGTGCTCGATAT-C--AAAACAAATGAAGATCATTGTTCGAAT
60 TAATGA-GAAGAATATGTTTATGGTGC-CTA-ATCCTGAAAA-GAATGGAGATTAGTATGAGATT
* ** * ** *
832123 CCTCGTTTGTCTCCTTTGAGGGACGAACTTCGATTT-
121 CAT-GTTTGTCTTATTT-AAGGATAAACTTTGATTTA
* * * * * * *
832159 TACAAAAATTTGAG-GGAAG-CAATCGTTTCTTGCCAAACCAAAGCAACAATATCTTGTATCCTT
1 T-CAAAAA--TG-GTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * * * * * * **
832222 ATGTGAAGACTATATTTGTGGTGCGTAATCTTGAAATGAGTGGGGATTAGTATGAGCATTCAACT
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGAG-ATTCATGT
* * *
832287 TTCTCTTTTTTAAGAGACAAA-TATTGATTCTA
126 TTGTCTTATTTAAG-GATAAACT-TTGATT-TA
* * * * * * * * *
832319 TTAAAAACGATGGAAGAAACGCTTCTCTCGAGACACCAAAGCATCAATGTCATGTAT-CTAATGA
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
* * * * * * * * *
832383 -AGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTT-TTATGAGAATCAATGCTT
66 GA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATGTTT
* * *
832446 GCCTCATTTAAGGGTCAAACTTTGATTT-
128 GTCTTATTTAAGGAT-AAACTTTGATTTA
* * * ** * ** * * *
832474 TAAGGAAAATAGG-GCAAAGAAAAGATTTTCACGCCAAAGGAAACCATCAATATCATTTATCATA
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * * ** * * *
832538 ATGAGGAGAATATGTTTATAGTGCCTAAT-TTCAAAACCAATAAAGATCATTGT-TCGA-ATCCT
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGAT--TAGTAT-GAGATTCA
* * * *
832600 TGTTTGTCTCT-TTTGAGGCATGAACTTCGGCTTT-
123 TGTTTGTCT-TATTTAAGG-ATAAACTT-TGATTTA
* *
832634 TCAAAAATTGGTGGGAAG-AAAG-TGTTTCTTGCGAAACCAAAGCATCAATA-CGGTGTATCCTT
1 TCAAAAA-TGGT-GGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATATC-ATGTATCCTA
* ** * * *
832696 ATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGTCTGGGGCTTAGTATGAGTATCCATGT
62 ATGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGAG-ATTCATGT
832761 TTGTCTTATTTAAGAGATAAACTTTGATTCTA
126 TTGTCTTATTTAAG-GATAAACTTTGATT-TA
* ** * * * * * * *
832793 TCAATAATAGCAGAAAGAAAACCTTCTCGTGTGACGA-CAAAGCATCAATGTCATGTATCCTAAT
1 TCAAAAAT-GGTGGAAGAAAAGCTTTTCTTGCGA-AACCAAAGCATCAATATCATGTATCCTAAT
* * * * * * * * ** * *
832857 GA-AGGGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGACTT-TTACAAGAATCAATGC
64 GAGA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGA-TTAGTATGAGATTC-ATGT
* *
832920 TTGTCTCATTTAAGGGTCAAACTTTGATTT-
126 TTGTCTTATTTAAGGAT-AAACTTTGATTTA
* * * * * * * *
832950 TAAGGAAAATGG-GGAAAAGAAAAGATTTCCATGCCAAA-GAAAACTATCAATATTCATTTATCC
1 TCA--AAAATGGTGG--AAGAAAAGCTTTTCTTGCGAAACCAAAGC-ATCAATA-TCATGTATCC
* * * * * * * * * * *
833013 TAATAAGGAA-AATGTGTTTATAGCGCCTAAT-CTCAAAACCAGTGAAGATCATTATTCGA-ATC
60 TAATGA-GAAGAATATGTTTATGGTGCCTAATCCTGAAAA-GAATGGAGATTAGTA-T-GAGATT
* * * * *
833075 CTTGTTTGTCTCT-TTTAAAGCATGAACTTAGGCTTT-
121 CATGTTTGTCT-TATTT-AAGGATAAACTT-TGATTTA
* * * * *
833111 TCAAAAATTGGTGGGAAG-AAAGCGTTTCTTGTGAAACCAAAGCATCAATA-CTAGGTGTCCTTA
1 TCAAAAA-TGGT-GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC-ATGTATCCTAA
* * * * *
833174 TGAGAA-ACTATGTTTATGGTGCCTAATCTTGAAAAAAATAGG-GATTCGCATGAGTATTCATGT
63 TGAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAAT-GGAGATTAGTATGAG-ATTCATGT
* * *
833237 TTATCTTATTTAA-GAGAAATTTTGATTCTA
126 TTGTCTTATTTAAGGATAAACTTTGATT-TA
* ** * * * * * * *
833267 TCAATAACAGTGGAAAAAAAAGCTTCTCTTAC-AACACTAAAGCATCAATGTTATGTAACCTAAT
1 TCAAAAATGGTGG-AAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAAT
* * * * * * * * * * *
833331 GA-AGGGAATGTATTTTTGGT-TCTCAATCTTGAAGAGATTGAAGACT-GTTATGAGAATCAATG
64 GAGA-AGAATATGTTTATGGTGCCT-AATCCTGAAAAGAATGGAGATTAG-TATGAGATTC-ATG
* *
833393 CTTGTTCTTATTTAAGGGTTAAACTTTGATTT-
125 TTTG-TCTTATTTAA-GGATAAACTTTGATTTA
* * * *
833425 TAAGGAAAATAGG-GCGAAGAAAAG-TTTTCTATGCCAGAAA--AAACCATCAATTTCATTTATC
1 TCA--AAAAT-GGTG-GAAGAAAAGCTTTTCT-TG-C-GAAACCAAAGCATCAATATCATGTATC
* * * * * * *
833486 TTAATAAGGAGAATGTGTTTATAGTGCCTAAT--TGCAAAATGAATGAAGATCCTTGCTA-GA-A
59 CTAATGAGAAGAATATGTTTATGGTGCCTAATCCTG-AAAA-GAATGGAGAT--TAG-TATGAGA
* * * * * * * *
833547 -TCTATGTTTATGTCATTCAATGCATGAACTTAGGCTTT-
119 TTC-ATGTTTGTCTTATTTAA-GGATAAACTT-TGATTTA
* * * * * * * * * **
833585 GCAAAAATTGGTGGGAAG-AAAGCGTTTCCTGTGAATCCAAGGTATCAATACCGTGTATCCTTGT
1 TCAAAAA-TGGT-GGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * * * *
833649 GAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTACTATAAGCATTCATGTAT
64 GAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGAG-ATTCATGTTT
*
833714 ATCTTATTTAAGAGATAAACTTTGATTCTA
128 GTCTTATTTAAG-GATAAACTTTGATT-TA
* *** * *
833744 TCAATACCAGTGGAAAGAAAAGCTTTTCTTGC-AACACCAAAGCATCAATGTCATGTATCTTAAT
1 TCAAAAATGGTGG-AAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAAT
* * * * * ** * * *
833808 GA-AAGGGAATGTATTTTTGGTTCCTAATCTTGAAAAG-ATGG-GAAACAGTTACGAGAATCAAA
64 GAGAA--GAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAG-ATTAG-TATGAGATTC-AT
* *
833870 GCTTGTCTTATTTAAAGG-TCAACCTTTGATTT-
124 GTTTGTCTTATTT-AAGGAT-AAACTTTGATTTA
* * * * * ** * * *
833902 T-AAGGAGAATAGG-GCAAAGAAAAGATTTCCATGCCAAAGAAAATCACCAATATCATTTATCCT
1 TCAA--A-AAT-GGTG-GAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCT
* * * * * * **
833965 AATGAGGAGAACATG-TT-T-GTAGCTCAAAACC--AATA-AA--GATCATT-GT-TCGA-AAAC
61 AATGAGAAGAATATGTTTATGGT-GC-CTAATCCTGAAAAGAATGGA-GATTAGTAT-GAGATTC
* * * * *
834019 TTGTTTGTCACT-TTTGAGGCATGAACTTTGGCTTT-
122 ATGTTTGTC-TTATTTAAGG-ATAAACTTT-GATTTA
* * * * *
834054 TGAAAAATTGGAGGGAAG-AAAG-TGTTTCTTGCGAAACCAAAGCATCAATACCATATATCCTTA
1 TCAAAAA-TGG-TGGAAGAAAAGCT-TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * *
834117 TGAGAAGACTGTG-TTAGTGGTGCCTAATCGT-AAAATGAATGGGGATTAGTATGAGTATTCAAG
63 TGAGAAGAATATGTTTA-TGGTGCCTAATCCTGAAAA-GAATGGAGATTAGTATGAG-ATTCATG
* *
834180 TTTGTCTTATTTAAGAGATAAAATATGATTCTA
125 TTTGTCTTATTTAAG-GATAAACTTTGATT-TA
* * * * ** * *
834213 TCAACAACGGTGGAAGAGAAGCTTCTCTTGCGGCACCAAAGCATCAATGTCATGTATCCTAACGA
1 TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
* ** * * *
834278 -AGGGAATGCGCTTT-TGGT-TCTCAATCTTGAAAAGAATGGAGACTTCA--ATGAGAATCAATG
66 GA-AGAATATG-TTTATGGTGCCT-AATCCTGAAAAGAATGGAGA-TT-AGTATGAGATTC-ATG
* * *
834338 CTTGTCTCATTTAAGGGTCAAACTTTGATTTA
125 TTTGTCTTATTTAAGGAT-AAACTTTGATTTA
834370 AAGGAAAATA
Statistics
Matches: 6454, Mismatches: 2029, Indels: 1386
0.65 0.21 0.14
Matches are distributed among these distances:
149 1 0.00
150 51 0.01
151 23 0.00
152 17 0.00
153 7 0.00
154 9 0.00
155 37 0.01
156 162 0.03
157 656 0.10
158 3057 0.47
159 1879 0.29
160 457 0.07
161 82 0.01
162 11 0.00
163 5 0.00
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (155 bp):
TCAAAAATGGTGGAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
GAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGAGATTCATGTTTGTC
TTATTTAAGGATAAACTTTGATTTA
Found at i:835349 original size:20 final size:20
Alignment explanation
Indices: 835324--835375 Score: 79
Period size: 19 Copynumber: 2.6 Consensus size: 20
835314 TACAAGCCAA
**
835324 TGTATCGATACAATTTTTGG
1 TGTATCGATACAATACTTGG
835344 TGTATCGATAC-ATACTTGG
1 TGTATCGATACAATACTTGG
835363 TGTATCGATACAA
1 TGTATCGATACAA
835376 GTTTGGCTAC
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
19 17 0.59
20 12 0.41
ACGTcount: A:0.29, C:0.13, G:0.19, T:0.38
Consensus pattern (20 bp):
TGTATCGATACAATACTTGG
Found at i:835381 original size:19 final size:18
Alignment explanation
Indices: 835324--835381 Score: 71
Period size: 19 Copynumber: 3.0 Consensus size: 18
835314 TACAAGCCAA
835324 TGTATCGATACAATTTTTGG
1 TGTATCGATACAA--TTTGG
*
835344 TGTATCGATACATACTTGG
1 TGTATCGATACA-ATTTGG
835363 TGTATCGATACAAGTTTGG
1 TGTATCGATACAA-TTTGG
835382 CTACTGCCAA
Statistics
Matches: 34, Mismatches: 2, Indels: 5
0.83 0.05 0.12
Matches are distributed among these distances:
18 1 0.03
19 20 0.59
20 12 0.35
21 1 0.03
ACGTcount: A:0.26, C:0.12, G:0.22, T:0.40
Consensus pattern (18 bp):
TGTATCGATACAATTTGG
Found at i:837474 original size:21 final size:20
Alignment explanation
Indices: 837445--837487 Score: 59
Period size: 20 Copynumber: 2.1 Consensus size: 20
837435 GGCTAGTGTG
*
837445 GGGACTGCCCGGTTGCGACCT
1 GGGACTG-CCGGTCGCGACCT
*
837466 GGGAGTGCCGGTCGCGACCT
1 GGGACTGCCGGTCGCGACCT
837486 GG
1 GG
837488 TGGTGCTGCC
Statistics
Matches: 20, Mismatches: 2, Indels: 1
0.87 0.09 0.04
Matches are distributed among these distances:
20 14 0.70
21 6 0.30
ACGTcount: A:0.09, C:0.30, G:0.44, T:0.16
Consensus pattern (20 bp):
GGGACTGCCGGTCGCGACCT
Found at i:837946 original size:13 final size:13
Alignment explanation
Indices: 837928--837966 Score: 69
Period size: 13 Copynumber: 3.0 Consensus size: 13
837918 ATAATCCCCC
*
837928 TGTATCGATACAG
1 TGTATCGATACAA
837941 TGTATCGATACAA
1 TGTATCGATACAA
837954 TGTATCGATACAA
1 TGTATCGATACAA
837967 AGAAAAATGT
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
13 25 1.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:844147 original size:13 final size:13
Alignment explanation
Indices: 844129--844154 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
844119 CAATTTTTGG
844129 TGTATCGATACAT
1 TGTATCGATACAT
844142 TGTATCGATACAT
1 TGTATCGATACAT
844155 ACTTGGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:844171 original size:32 final size:33
Alignment explanation
Indices: 844109--844172 Score: 94
Period size: 32 Copynumber: 2.0 Consensus size: 33
844099 TACAAGCCAA
** *
844109 TGTATCGATACAATTTTTGGTGTATCGATACAT
1 TGTATCGATACAATACTTGGTGTATAGATACAT
844142 TGTATCGATAC-ATACTTGGTGTATAGATACA
1 TGTATCGATACAATACTTGGTGTATAGATACA
844173 AGTTTGGCTA
Statistics
Matches: 28, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
32 17 0.61
33 11 0.39
ACGTcount: A:0.30, C:0.12, G:0.19, T:0.39
Consensus pattern (33 bp):
TGTATCGATACAATACTTGGTGTATAGATACAT
Found at i:845920 original size:475 final size:478
Alignment explanation
Indices: 844548--846695 Score: 2762
Period size: 476 Copynumber: 4.5 Consensus size: 478
844538 GATCCTAACA
* *
844548 AATACCATGTGTCCTTATGAGAAGACTATGTTTATGGTGCGTAATCTTGAAAAGAATAGGGATTA
1 AATACCATGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTA
* * * *
844613 GCATGAGTATTCATGTTTGCCTTATTTAGGAGACAAACTTTGATTCTATCAATAACAGTTGAAAG
66 GCATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCAATAACAGTGGAAAG
* * * * * * *
844678 AAAAGCTTCTCTTGCAACACCAAACCATTAATGTCATGTAACCTAATGAAGGGAATTTACTTTCT
131 AAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT-GTTTTT
* * * *
844743 -GTTCCCAATCTTGAAAAGATTGAAGACTGTTACGAGAATCAACGCTTGTTCTTATTTAAGGGTC
195 GGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGTTCTCATTTAAGGGTC
* * * *
844807 AAACTTTGATTTTAAGAAAAATAAGGCAAAGAAAAG-TTTTATATGCCAAAGAAAACCATCAA-T
260 AAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTT-CATGCCAAAGAAAACCATCAATT
** * * * *
844870 CACATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAATAAAGATCATTG
324 TTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTG
*
844935 TTCGAATCCTTGTTTGTCTCTTTTG-AGGCATGAACCTAGGCTTTTCAAAAATTGGTGGGAAGAA
389 TTCGAATCCTTGTTTGTCTC-TTTGAAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAA
* *
844999 AGTGTTTCTTGCGAAACCAAAGCATT
453 AGCGTTTCTTGCGAAACCAAAGCATC
* * * * ** * *
845025 AATACCATGTATCCTTATGGGAAGACTATCTTTATGGTGCCTAATCCTGAAAAGTCTGCGGCTTA
1 AATACCATGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTA
* * * * * * * *
845090 GTATGAGTACTCTTGTTCGACTTATTTAGGAGATAAACGTTGATTCT-TCCAATAACAGGGGAAA
66 GCATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTAT-CAATAACAGTGGAAA
* * * * *
845154 CAAAACCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAGGGGAATGTGTTTTT
130 GAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTT
* * * *
845219 GGTTCCCAAT-TTAGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTG-CCTCATTTAAGTGT
195 GGTTCCCAATCTT-GAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGTTCTCATTTAAGGGT
* *
845282 CAAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATAAATT
259 CAAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATT
*
845347 TTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAGTCTCAAAACCAATGAAGATCATTG
324 TTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTG
845412 TTCGAATCCTTGTTTGTCTCTTTTGAA-GCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAA
389 TTCGAATCCTTGTTTGTCTC-TTTGAAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAA
845476 AGCGTTTCTTGCGAAACCAAAGCATC
453 AGCGTTTCTTGCGAAACCAAAGCATC
*
845502 AATACTATGTGTCCTTATGAGAA-ACTATGTTTATGGTGCCTAATCTCT-AAAAGAATGGGGATT
1 AATACCATGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAATCT-TGAAAAGAATGGGGATT
* ** * *
845565 AGCATGAGTATTCATGCTTGTCTTATTTAAGAGGCAAAATTTGATTCTATCAATAACAATGGAAA
65 AGCATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCAATAACAGTGGAAA
* * *
845630 -AAAAGCTTCTCTTGCGACACTAAAGCATCAATGTCATGTAACCTAATGAAGGGAATGTATTTTT
130 GAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTT
* * * * *
845694 GGTTCTCAATCTTGAAGAG-ATTGACGACTGTTACGAGAATCAATGCTTGTTCTTATTTAGGGGT
195 GGTTCCCAATCTTGAAAAGAATGGA-GACTGTTACGAGAATCAATGCTTGTTCTCATTTAAGGGT
* * * *
845758 TAAACTTTAATTTTAAGGAAAATAGGGAAAAGAAAAG-CTTTCTATGCCAAAAAAAACCATCAA-
259 CAAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTC-ATGCCAAAGAAAACCATCAAT
* * ** *
845821 TTTCATTTAT-CTCAATGAGGAGAATGTGTTTATAGTGCCTAAT-TACAAAATGAATGAAGATCC
323 TTTCATTTATCCT-AATAAGGAAAATGTGTTTATAGTGCCTAATCT-CAAAACCAATGAAGATCA
** * * * * *
845884 TTACTAGAAT-CTATGTTTATGTCTTTCAATGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAA
386 TTGTTCGAATCCT-TGTTTGTCTCTTTGAAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAA
* *
845948 GAAAGCATTTCTTGTGAAACCAAAGCATC
450 GAAAGCGTTTCTTGCGAAACCAAAGCATC
* * * * *
845977 AATACCATGTATCCTTGTGAGAAGACTATGTTTATGGTACCTAATGC-AGAAAAGAGTGGGGATT
1 AATACCATGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAAT-CTTGAAAAGAATGGGGATT
* * *
846041 AGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCGATAAC-GATGG-A
65 AGCATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCAATAACAG-TGGAA
* * * * *
846104 AGAAAAGCTTCTATCGCAACACCAAAGCATCAATGTCATGTATCCTAATAAAGGGAATATGTTTT
129 AGAAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTT
* * * * *
846169 TGGTTCCCAAT-TATGAAGAGAATAGAGACTTTTATGAGAATCAATGCCTG-TCTCATTTAAGGG
194 TGGTTCCCAATCT-TGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGTTCTCATTTAAGGG
* * *
846232 TCAAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCTAAAGAAAACCCTTAAT
258 TCAAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAAT
*
846297 TTTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAATCTCAAAACAAATGAAGATCATT
323 TTTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATT
* * * * *
846362 GTTCGAATCCTTGTTTGTCTCTTTGGAGGCATGAACTTAGGCTTTTGAAAACTTGCTGGGAAAAA
388 GTTCGAATCCTTGTTTGTCTCTTTGAAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAA
* *
846427 AGCGTTTCTTGCGAAAACAATGCATC
453 AGCGTTTCTTGCGAAACCAAAGCATC
* ** * *
846453 AAAAGTATGTG-CCTTATGAGAA-ACTATGTTTATGGTGCCTAATCTTCAAATGAATGGGGATTA
1 AATACCATGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTA
* * * *
846516 GCATGAGTATTCTTGTTTGTCTTATTTCAGAGATAAACTTTGATTCTATCAATAATAGTAGAAAG
66 GCATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCAATAACAGTGGAAAG
* * * * *
846581 AAAACCTTCTCGTGTGACACCAAAGCATCAATGTCACGTATCCTAATGAAAGGAATGTGTTTTTG
131 AAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTG
* *
846646 GTTCCCAATCTTGAAAAGAATGGAGACT-TCTGCAAGAATCAATGCTTGTT
196 GTTCCCAATCTTGAAAAGAATGGAGACTGT-TACGAGAATCAATGCTTGTT
846696 GTAGACACCT
Statistics
Matches: 1436, Mismatches: 201, Indels: 69
0.84 0.12 0.04
Matches are distributed among these distances:
473 1 0.00
474 101 0.07
475 418 0.29
476 538 0.37
477 377 0.26
478 1 0.00
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (478 bp):
AATACCATGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTA
GCATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCAATAACAGTGGAAAG
AAAAGCTTCTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTG
GTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGTTCTCATTTAAGGGTCA
AACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCCAAAGAAAACCATCAATTTT
CATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAATCTCAAAACCAATGAAGATCATTGTT
CGAATCCTTGTTTGTCTCTTTGAAGGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGC
GTTTCTTGCGAAACCAAAGCATC
Found at i:846615 original size:951 final size:951
Alignment explanation
Indices: 844554--846695 Score: 3030
Period size: 951 Copynumber: 2.2 Consensus size: 951
844544 AACAAATACC
* * *
844554 ATGTGTCCTTATGAGAAGACTATGTTTATGGTGCGTAATCTTGAAAAGAATAGGGATTAGCATGA
1 ATGTGTCCTTATGAGAA-ACTATGTTTATGGTGCCTAATCTTCAAAAGAATGGGGATTAGCATGA
* *
844619 GTATTCATGTTTGCCTTATTTAGGAGACAAACTTTGATTCTATCAATAACAGTTGAAAGAAAAGC
65 GTATTCATGTTTGTCTTATTTA-GAGACAAACTTTGATTCTATCAATAACAGTAGAAAGAAAAGC
* * * * *
844684 TTCTCTTGCAACACCAAACCATTAATGTCATGTAACCTAATGAAGGGAATTTACTTTCT-GTTCC
129 TTCTCTTGCGACACCAAAGCATCAATGTCATGTAACCTAATGAAGGGAATGTA-TTTTTGGTTCC
*
844748 CAATCTTGAAAAGATTGAAGACTGTTACGAGAATCAACGCTTGTTCTTATTTAAGGGTCAAACTT
193 CAATCTTGAAAAGATTG-AGACTGTTACGAGAATCAATGCTTGTTCTTATTTAAGGGTCAAACTT
* * * *
844813 TGATTTTAAGAAAAATAAGGCAAAGAAAAGTTTTATATGCCAAAGAAAACCATCAATCACATTTA
257 TAATTTTAAGAAAAATAAGGAAAAGAAAAGCTTTATATGCCAAAAAAAACCATCAATCACATTTA
** *
844878 TCCTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAATAAAGATCATTGTTCGAATC
322 TCCTAATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAATAAAGATCATTACTAGAATC
* ** **
844943 CTTGTTTGTCTCTTTTGAGGCATGAACCTAGGCTTTTCAAAAATTGGTGGGAAGAAAGTGTTTCT
387 CTTGTTTATCTCTTTCAAGGCATGAACCTAGGCTTTTCAAAAATTGGTGGGAAGAAAGCATTTCT
* * * *
845008 TGCGAAACCAAAGCATTAATACCATGTATCCTTATGGGAAGACTATCTTTATGGTGCCTAATCCT
452 TGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATCTTTATGGTACCTAATCCA
* * * * *
845073 GAAAAGTCTGCGGCTTAGTATGAGTACTCTTGTTCGACTTATTTAGGAGATAAACGTTGATTCTT
517 GAAAAGACTGCGGATTAGTATGAGCACTCATGTTCGACTTATTTAAGAGATAAACGTTGATTCTT
* * * ** *
845138 CCAATAACAGGGGAAACAAAACCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATG
582 CCAATAACAGGGGAAACAAAACCTTCTATCGCAACACCAAAGCATCAATGTCATGTATCCTAATA
* * * *
845203 AGGGGAATGTGTTTTTGGTTCCCAATTTAGAAAAGAATGGAGACTTTTACAAGAATCAATGCTTG
647 AAGGGAATATGTTTTTGGTTCCCAATTTAGAAAAGAATAGAGACTTTTACAAGAATCAATGCCTG
* *
845268 CCTCATTTAAGTGTCAAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCCAAA
712 CCTCATTTAAGGGTCAAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCCAAA
* *
845333 GAAAACCATAAATTTTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAGTCTCAAAACC
777 GAAAACCATAAATTTTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAATCTCAAAACA
*
845398 AATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTTGAAGCATGAACTTAGGCTTTTCAAAAA
842 AATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTGGAAGCATGAACTTAGGCTTTTCAAAAA
* * * *
845463 TTGGTGGGAAGAAAGCGTTTCTTGCGAAACCAAAGCATCAATACT
907 TTGCTGGGAAAAAAGCGTTTCTTGCGAAAACAAAGCATCAAAACT
845508 ATGTGTCCTTATGAGAAACTATGTTTATGGTGCCTAATC-TCTAAAAGAATGGGGATTAGCATGA
1 ATGTGTCCTTATGAGAAACTATGTTTATGGTGCCTAATCTTC-AAAAGAATGGGGATTAGCATGA
* * * * *
845572 GTATTCATGCTTGTCTTATTTAAGAGGCAAAATTTGATTCTATCAATAACAATGGAAA-AAAAGC
65 GTATTCATGTTTGTCTTATTT-AGAGACAAACTTTGATTCTATCAATAACAGTAGAAAGAAAAGC
* *
845636 TTCTCTTGCGACACTAAAGCATCAATGTCATGTAACCTAATGAAGGGAATGTATTTTTGGTTCTC
129 TTCTCTTGCGACACCAAAGCATCAATGTCATGTAACCTAATGAAGGGAATGTATTTTTGGTTCCC
* * *
845701 AATCTTGAAGAGATTGACGACTGTTACGAGAATCAATGCTTGTTCTTATTTAGGGGTTAAACTTT
194 AATCTTGAAAAGATTGA-GACTGTTACGAGAATCAATGCTTGTTCTTATTTAAGGGTCAAACTTT
* * * **
845766 AATTTTAAGGAAAATAGGGAAAAGAAAAGCTTTCTATGCCAAAAAAAACCATCAATTTCATTTAT
258 AATTTTAAGAAAAATAAGGAAAAGAAAAGCTTTATATGCCAAAAAAAACCATCAATCACATTTAT
* ** * *
845831 -CTCAATGAGGAGAATGTGTTTATAGTGCCTAAT-TACAAAATGAATGAAGATCCTTACTAGAAT
323 CCT-AATGAGGAGAATATGTTTATAGTGCCTAATCT-CAAAACCAATAAAGATCATTACTAGAAT
* * *
845894 -CTATGTTTATGTCTTTCAATGCATGAACTTAGGCTTTTCAAAAATTGGTGGGAAGAAAGCATTT
386 CCT-TGTTTATCTCTTTCAAGGCATGAACCTAGGCTTTTCAAAAATTGGTGGGAAGAAAGCATTT
* * * *
845958 CTTGTGAAACCAAAGCATCAATACCATGTATCCTTGTGAGAAGACTATGTTTATGGTACCTAATG
450 CTTGCGAAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATCTTTATGGTACCTAATC
* * * * * *
846023 CAGAAAAGAGTGGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTC
515 CAGAAAAGACTGCGGATTAGTATGAGCACTCATGTTCGACTTATTTAAGAGATAAACGTTGATTC
* * * *
846088 TAT-CGATAAC-GATGG-AAGAAAAGCTTCTATCGCAACACCAAAGCATCAATGTCATGTATCCT
580 T-TCCAATAACAG-GGGAAACAAAACCTTCTATCGCAACACCAAAGCATCAATGTCATGTATCCT
* **
846150 AATAAAGGGAATATGTTTTTGGTTCCCAA-TTATGAAGAGAATAGAGACTTTTATGAGAATCAAT
643 AATAAAGGGAATATGTTTTTGGTTCCCAATTTA-GAAAAGAATAGAGACTTTTACAAGAATCAAT
*
846214 GCCTGTCTCATTTAAGGGTCAAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATG
707 GCCTGCCTCATTTAAGGGTCAAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATG
* * *
846279 CTAAAGAAAACCCTTAATTTTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAATCTCA
772 CCAAAGAAAACCATAAATTTTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAATCTCA
* *
846344 AAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTGGAGGCATGAACTTAGGCTTTTG
837 AAACAAATGAAGATCATTGTTCGAATCCTTGTTTGTCTCTTTGGAAGCATGAACTTAGGCTTTTC
* * *
846409 AAAACTTGCTGGGAAAAAAGCGTTTCTTGCGAAAACAATGCATCAAAAGT
902 AAAAATTGCTGGGAAAAAAGCGTTTCTTGCGAAAACAAAGCATCAAAACT
*
846459 ATGTG-CCTTATGAGAAACTATGTTTATGGTGCCTAATCTTCAAATGAATGGGGATTAGCATGAG
1 ATGTGTCCTTATGAGAAACTATGTTTATGGTGCCTAATCTTCAAAAGAATGGGGATTAGCATGAG
* * * *
846523 TATTCTTGTTTGTCTTATTTCAGAGATAAACTTTGATTCTATCAATAATAGTAGAAAGAAAACCT
66 TATTCATGTTTGTCTTATTT-AGAGACAAACTTTGATTCTATCAATAACAGTAGAAAGAAAAGCT
* * * * * *
846588 TCTCGTGTGACACCAAAGCATCAATGTCACGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCA
130 TCTCTTGCGACACCAAAGCATCAATGTCATGTAACCTAATGAAGGGAATGTATTTTTGGTTCCCA
* * *
846653 ATCTTGAAAAGAATGGAGACT-TCTGCAAGAATCAATGCTTGTT
195 ATCTTGAAAAG-ATTGAGACTGT-TACGAGAATCAATGCTTGTT
846696 GTAGACACCT
Statistics
Matches: 1052, Mismatches: 122, Indels: 31
0.87 0.10 0.03
Matches are distributed among these distances:
950 107 0.10
951 432 0.41
952 402 0.38
953 93 0.09
954 18 0.02
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (951 bp):
ATGTGTCCTTATGAGAAACTATGTTTATGGTGCCTAATCTTCAAAAGAATGGGGATTAGCATGAG
TATTCATGTTTGTCTTATTTAGAGACAAACTTTGATTCTATCAATAACAGTAGAAAGAAAAGCTT
CTCTTGCGACACCAAAGCATCAATGTCATGTAACCTAATGAAGGGAATGTATTTTTGGTTCCCAA
TCTTGAAAAGATTGAGACTGTTACGAGAATCAATGCTTGTTCTTATTTAAGGGTCAAACTTTAAT
TTTAAGAAAAATAAGGAAAAGAAAAGCTTTATATGCCAAAAAAAACCATCAATCACATTTATCCT
AATGAGGAGAATATGTTTATAGTGCCTAATCTCAAAACCAATAAAGATCATTACTAGAATCCTTG
TTTATCTCTTTCAAGGCATGAACCTAGGCTTTTCAAAAATTGGTGGGAAGAAAGCATTTCTTGCG
AAACCAAAGCATCAATACCATGTATCCTTATGAGAAGACTATCTTTATGGTACCTAATCCAGAAA
AGACTGCGGATTAGTATGAGCACTCATGTTCGACTTATTTAAGAGATAAACGTTGATTCTTCCAA
TAACAGGGGAAACAAAACCTTCTATCGCAACACCAAAGCATCAATGTCATGTATCCTAATAAAGG
GAATATGTTTTTGGTTCCCAATTTAGAAAAGAATAGAGACTTTTACAAGAATCAATGCCTGCCTC
ATTTAAGGGTCAAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCCAAAGAAA
ACCATAAATTTTCATTTATCCTAATAAGGAAAATGTGTTTATAGTGCCTAATCTCAAAACAAATG
AAGATCATTGTTCGAATCCTTGTTTGTCTCTTTGGAAGCATGAACTTAGGCTTTTCAAAAATTGC
TGGGAAAAAAGCGTTTCTTGCGAAAACAAAGCATCAAAACT
Found at i:847005 original size:19 final size:19
Alignment explanation
Indices: 846981--847048 Score: 85
Period size: 19 Copynumber: 3.9 Consensus size: 19
846971 AATTCAACAA
846981 TTTGTATCGATACATAAGT
1 TTTGTATCGATACATAAGT
847000 TTTGTATCGATAC--AA--
1 TTTGTATCGATACATAAGT
847015 --TGTATCGATACATAAGT
1 TTTGTATCGATACATAAGT
*
847032 ATTGTATCGATACATAA
1 TTTGTATCGATACATAA
847049 TTAGCTACTG
Statistics
Matches: 43, Mismatches: 0, Indels: 12
0.78 0.00 0.22
Matches are distributed among these distances:
13 11 0.26
15 2 0.05
17 2 0.05
19 28 0.65
ACGTcount: A:0.35, C:0.12, G:0.15, T:0.38
Consensus pattern (19 bp):
TTTGTATCGATACATAAGT
Found at i:847020 original size:13 final size:13
Alignment explanation
Indices: 847002--847026 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
846992 ACATAAGTTT
847002 TGTATCGATACAA
1 TGTATCGATACAA
847015 TGTATCGATACA
1 TGTATCGATACA
847027 TAAGTATTGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:847024 original size:32 final size:32
Alignment explanation
Indices: 846983--847045 Score: 117
Period size: 32 Copynumber: 2.0 Consensus size: 32
846973 TTCAACAATT
*
846983 TGTATCGATACATAAGTTTTGTATCGATACAA
1 TGTATCGATACATAAGTATTGTATCGATACAA
847015 TGTATCGATACATAAGTATTGTATCGATACA
1 TGTATCGATACATAAGTATTGTATCGATACA
847046 TAATTAGCTA
Statistics
Matches: 30, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
32 30 1.00
ACGTcount: A:0.35, C:0.13, G:0.16, T:0.37
Consensus pattern (32 bp):
TGTATCGATACATAAGTATTGTATCGATACAA
Found at i:847695 original size:55 final size:55
Alignment explanation
Indices: 847587--848025 Score: 740
Period size: 55 Copynumber: 8.0 Consensus size: 55
847577 GATGCTTTTT
*
847587 CCTTTCAAAGCCCAAACAAGTTGGTGGCACTTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCA-TTTTCCAGTCCTCAAAGAGCAGGACA
*
847643 CCTCTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
*
847698 CCTTTCAAAGCCCACCCAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
*
847753 CCTTTCAAAGCCCACCCAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
*
847808 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGATA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
*
847863 CCTTTCAAAGCCCACCCAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
847918 CCTCTT-AAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCT-TTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
* * *
847973 CCTCTT-AAAGCCCACACAAGTTGGTGGCACCTTT-CAGTCCCCAAAGAGTAGGA
1 CCT-TTCAAAGCCCACACAAGTTGGTGGCA-TTTTCCAGTCCTCAAAGAGCAGGA
848026 TGCTTGTTGT
Statistics
Matches: 369, Mismatches: 12, Indels: 5
0.96 0.03 0.01
Matches are distributed among these distances:
55 337 0.91
56 32 0.09
ACGTcount: A:0.28, C:0.30, G:0.20, T:0.22
Consensus pattern (55 bp):
CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
Found at i:848343 original size:19 final size:19
Alignment explanation
Indices: 848319--848388 Score: 80
Period size: 19 Copynumber: 4.0 Consensus size: 19
848309 AATTCAACAA
848319 TTTGTATCGATACATAATT
1 TTTGTATCGATACATAATT
848338 TTTGTATCGATAC--AA--
1 TTTGTATCGATACATAATT
*
848353 --TGTATCGATACATAAGT
1 TTTGTATCGATACATAATT
*
848370 ATTGTATCGATACATAATT
1 TTTGTATCGATACATAATT
848389 AGCTACTGCC
Statistics
Matches: 44, Mismatches: 1, Indels: 12
0.77 0.02 0.21
Matches are distributed among these distances:
13 11 0.25
15 2 0.05
17 2 0.05
19 29 0.66
ACGTcount: A:0.34, C:0.11, G:0.13, T:0.41
Consensus pattern (19 bp):
TTTGTATCGATACATAATT
Found at i:848358 original size:13 final size:13
Alignment explanation
Indices: 848340--848364 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
848330 ACATAATTTT
848340 TGTATCGATACAA
1 TGTATCGATACAA
848353 TGTATCGATACA
1 TGTATCGATACA
848365 TAAGTATTGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:848362 original size:32 final size:32
Alignment explanation
Indices: 848321--848383 Score: 108
Period size: 32 Copynumber: 2.0 Consensus size: 32
848311 TTCAACAATT
* *
848321 TGTATCGATACATAATTTTTGTATCGATACAA
1 TGTATCGATACATAAGTATTGTATCGATACAA
848353 TGTATCGATACATAAGTATTGTATCGATACA
1 TGTATCGATACATAAGTATTGTATCGATACA
848384 TAATTAGCTA
Statistics
Matches: 29, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
32 29 1.00
ACGTcount: A:0.35, C:0.13, G:0.14, T:0.38
Consensus pattern (32 bp):
TGTATCGATACATAAGTATTGTATCGATACAA
Found at i:849033 original size:55 final size:55
Alignment explanation
Indices: 848925--849583 Score: 1017
Period size: 55 Copynumber: 12.0 Consensus size: 55
848915 GATGCTTTTT
*
848925 CCTTTCAAAGCCCAAACAAGTTGGTGGCACTTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCA-TTTTCCAGTCCTCAAAGAGCAGGACA
*
848981 CCTCTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
*
849036 CCTTTCAAAGCCCACCCAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
*
849091 CCTTTCAAAGCCCACCCAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
*
849146 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGATA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
*
849201 CCTTTCAAAGCCCACCCAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
* *
849256 CCTCTT-AAAGCCCACACAAGTTGGTGGCACCTTT-CAGTCCCCAAAGAGCAGGACA
1 CCT-TTCAAAGCCCACACAAGTTGGTGGCA-TTTTCCAGTCCTCAAAGAGCAGGACA
*
849311 CCTTTCAAAGCCCACCCAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
* * *
849366 CCTCTT-AAAGCCCACACAAGTTGGTGCCACCTTT-CAGTCCCCAAAGAGCAGGACA
1 CCT-TTCAAAGCCCACACAAGTTGGTGGCA-TTTTCCAGTCCTCAAAGAGCAGGACA
849421 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
* * * *
849476 CCTCTT-AAAACCCACGCAAGTTGGTGGCACCTTT-CAGTCCTCAAAGAGCAGGACG
1 CCT-TTCAAAGCCCACACAAGTTGGTGGCA-TTTTCCAGTCCTCAAAGAGCAGGACA
* * * *
849531 CCTTTCAAAGCCCACACGAGTTGGTGGCACTTTT-TACTCCTCAATGAGCAGGA
1 CCTTTCAAAGCCCACACAAGTTGGTGGCA-TTTTCCAGTCCTCAAAGAGCAGGA
849584 TACACTTTAT
Statistics
Matches: 560, Mismatches: 32, Indels: 23
0.91 0.05 0.04
Matches are distributed among these distances:
54 12 0.02
55 506 0.90
56 42 0.08
ACGTcount: A:0.28, C:0.31, G:0.20, T:0.21
Consensus pattern (55 bp):
CCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGACA
Found at i:850429 original size:19 final size:19
Alignment explanation
Indices: 850405--850472 Score: 85
Period size: 19 Copynumber: 3.9 Consensus size: 19
850395 AATTCAACAA
850405 TTTGTATCGATACATAAGT
1 TTTGTATCGATACATAAGT
850424 TTTGTATCGATAC--AA--
1 TTTGTATCGATACATAAGT
850439 --TGTATCGATACATAAGT
1 TTTGTATCGATACATAAGT
*
850456 ATTGTATCGATACATAA
1 TTTGTATCGATACATAA
850473 TTAGCTACTG
Statistics
Matches: 43, Mismatches: 0, Indels: 12
0.78 0.00 0.22
Matches are distributed among these distances:
13 11 0.26
15 2 0.05
17 2 0.05
19 28 0.65
ACGTcount: A:0.35, C:0.12, G:0.15, T:0.38
Consensus pattern (19 bp):
TTTGTATCGATACATAAGT
Found at i:850444 original size:13 final size:13
Alignment explanation
Indices: 850426--850450 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
850416 ACATAAGTTT
850426 TGTATCGATACAA
1 TGTATCGATACAA
850439 TGTATCGATACA
1 TGTATCGATACA
850451 TAAGTATTGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:850444 original size:32 final size:32
Alignment explanation
Indices: 850407--850469 Score: 117
Period size: 32 Copynumber: 2.0 Consensus size: 32
850397 TTCAACAATT
*
850407 TGTATCGATACATAAGTTTTGTATCGATACAA
1 TGTATCGATACATAAGTATTGTATCGATACAA
850439 TGTATCGATACATAAGTATTGTATCGATACA
1 TGTATCGATACATAAGTATTGTATCGATACA
850470 TAATTAGCTA
Statistics
Matches: 30, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
32 30 1.00
ACGTcount: A:0.35, C:0.13, G:0.16, T:0.37
Consensus pattern (32 bp):
TGTATCGATACATAAGTATTGTATCGATACAA
Found at i:850530 original size:13 final size:13
Alignment explanation
Indices: 850512--850537 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
850502 CATTTTTCTG
850512 TGTATCGATACAT
1 TGTATCGATACAT
850525 TGTATCGATACAT
1 TGTATCGATACAT
850538 GGATCTTTGT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Done.