Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2250
Parameters: 2 7 7 80 10 50 1000
Length:  36241

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1374--1517
29
4.8
29
75
9
108
34
4
2
57
1.34
1361--1517
31
5.1
31
76
6
142
34
4
2
58
1.32
3163--3211
2
26.0
2
78
12
50
42
2
4
51
1.32
5977--6047
28
2.5
28
77
6
90
30
2
15
50
1.58
8166--8257
41
2.3
41
84
1
123
38
6
4
51
1.48
10588--10646
29
2.0
29
86
0
82
55
8
1
33
1.40
12388--12454
28
2.3
29
84
2
82
25
7
14
52
1.68
12440--12551
57
1.9
57
82
8
138
33
15
8
43
1.75
14019--14054
19
1.9
18
88
5
54
47
0
2
50
1.15
17623--17751
41
3.1
41
93
2
215
41
11
2
44
1.53
19607--19635
3
9.7
3
100
0
58
65
0
0
34
0.93
22190--22236
20
2.5
20
90
10
73
48
0
0
51
1.00
22358--22392
18
1.9
18
88
11
54
28
0
0
71
0.86
22387--22420
17
2.0
17
88
0
50
52
0
0
47
1.00
22401--22450
12
4.4
12
80
9
61
40
0
0
60
0.97
24023--24511
245
2.0
245
96
0
906
19
15
15
49
1.80
31948--32959
28
35.3
28
81
6
892
27
29
17
25
1.97
31952--32922
58
17.0
58
83
7
921
27
29
17
25
1.97
31933--32971
85
12.1
85
82
7
944
27
29
17
25
1.97
31933--32959
113
9.0
112
82
6
949
27
29
17
25
1.97
32981--33103
49
2.6
46
81
7
140
19
27
21
30
1.98

Tables:   1

The End!