Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2251
Parameters: 2 7 7 80 10 50 1000
Length:  66343

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5068--5100
15
2.1
16
88
5
50
63
15
6
15
1.49
7201--7242
18
2.4
19
80
15
54
57
0
0
42
0.99
9131--9159
13
2.3
13
94
5
51
62
0
0
37
0.96
10463--10502
20
2.0
20
85
5
53
50
2
0
47
1.14
10470--10560
44
2.1
43
81
6
103
42
5
3
48
1.42
11412--11462
26
2.0
27
85
14
72
9
11
1
76
1.10
11413--11468
26
2.2
25
81
15
62
14
10
1
73
1.18
11721--11762
16
2.6
16
84
3
57
80
4
4
9
0.99
12655--12704
22
2.4
20
84
15
66
62
0
0
38
0.96
15130--15158
3
9.7
3
100
0
58
31
0
0
68
0.89
16944--16991
21
2.3
20
85
7
60
45
0
2
52
1.12
16942--16996
16
3.4
16
76
2
56
49
0
1
49
1.11
18819--18850
2
16.0
2
100
0
64
50
0
0
50
1.00
20074--20119
20
2.3
20
84
0
56
36
4
45
13
1.63
25643--25703
30
2.0
30
100
0
122
34
16
22
26
1.95
27713--27747
12
2.7
13
91
8
54
0
14
0
85
0.59
28988--29334
32
10.8
32
93
1
543
16
18
33
31
1.93
29320--30158
27
30.7
27
89
2
1241
28
13
33
23
1.93
29320--30158
82
10.2
81
90
2
1277
28
13
33
23
1.93
29320--30158
109
7.7
109
91
1
1272
28
13
33
23
1.93
37964--37999
17
2.1
17
89
0
54
0
16
0
83
0.65
38914--38949
18
2.0
18
100
0
72
44
11
5
38
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40268--40354
22
4.0
22
77
5
79
52
1
10
35
1.43
40498--40546
22
2.2
22
96
0
89
24
4
34
36
1.75
45296--45379
34
2.5
34
86
3
107
25
2
32
40
1.68
45960--46100
22
6.7
22
69
9
78
56
1
7
34
1.37
45978--46096
43
2.9
42
76
7
111
57
1
7
33
1.37
47584--47656
33
2.2
34
87
7
105
38
2
1
57
1.22
48383--48415
2
16.5
2
100
0
66
0
48
0
51
1.00
49677--49741
27
2.4
28
82
10
80
26
4
21
47
1.70
50241--50358
34
3.5
33
85
7
166
42
26
6
24
1.79
59581--59607
2
13.5
2
100
0
54
0
0
48
51
1.00
60254--60312
21
2.9
19
76
14
55
52
0
1
45
1.10
61138--61179
23
1.9
23
85
9
61
19
4
7
69
1.31
61884--61914
2
15.5
2
100
0
62
48
0
0
51
1.00
64726--64755
4
7.5
4
92
0
51
23
3
23
50
1.64

Tables:   1

The End!