Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2252
Parameters: 2 7 7 80 10 50 1000
Length:  43818

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1202--1262
17
3.3
19
71
24
51
45
0
0
54
1.00
1220--1310
12
7.2
13
75
15
68
39
0
1
59
1.05
1252--1307
5
11.4
5
75
24
57
33
0
1
64
1.04
1220--1342
19
6.2
18
74
19
95
37
0
1
60
1.06
1260--1338
41
1.9
42
84
2
106
31
0
2
65
1.06
1255--1337
36
2.3
35
84
11
107
32
0
2
65
1.06
5535--5572
20
1.9
20
84
10
51
44
2
0
52
1.14
5522--6064
175
3.1
171
76
6
536
39
6
6
47
1.56
6385--6425
14
3.2
13
78
21
50
29
0
0
70
0.87
12040--12076
16
2.3
17
81
13
51
64
2
0
32
1.07
12065--12137
20
3.6
19
71
20
58
53
1
0
45
1.09
14260--14288
2
14.5
2
100
0
58
51
0
0
48
1.00
14867--14906
16
2.4
16
87
8
53
70
0
0
30
0.88
19400--19436
2
18.5
2
94
0
65
48
2
0
48
1.15
22555--22590
16
2.2
16
90
9
56
44
0
2
52
1.15
22693--22741
23
2.1
23
88
7
73
38
0
0
61
0.96
23689--23740
2
26.0
2
100
0
104
0
50
0
50
1.00
26381--26429
4
11.8
4
91
8
80
22
4
0
73
1.00
26381--26429
22
2.3
20
93
6
80
22
4
0
73
1.00
27162--27200
19
2.1
19
85
0
51
35
0
2
61
1.10
27738--27797
25
2.3
27
85
11
97
8
16
33
41
1.78
37527--37564
16
2.3
17
86
4
51
31
0
0
68
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39473--39507
2
17.5
2
87
0
52
51
5
0
42
1.25

Tables:   1

The End!