Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2253
Parameters: 2 7 7 80 10 50 1000
Length:  41416

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3110--3185
12
6.9
11
75
15
52
39
2
48
9
1.49
3109--3194
24
3.8
24
72
17
85
41
2
45
10
1.51
3100--3218
42
2.8
42
92
0
193
42
2
46
8
1.47
7182--7231
23
2.2
23
81
0
55
78
2
14
6
1.03
7842--7917
12
6.9
11
75
15
52
39
2
48
9
1.49
7841--7926
24
3.8
24
72
17
85
41
2
45
10
1.51
7832--7950
42
2.8
42
92
0
193
42
2
46
8
1.47
13850--13955
42
2.5
42
89
3
160
39
2
47
10
1.53
16706--16790
28
3.0
28
100
0
170
32
10
10
45
1.73
17361--17446
24
3.8
24
73
17
94
40
2
46
10
1.51
17352--17470
42
2.8
42
90
0
184
42
2
47
8
1.47
21292--21658
159
2.3
159
80
3
409
32
19
11
36
1.88
26661--26730
18
3.6
18
68
26
52
10
44
1
44
1.46
26685--26755
22
3.4
21
75
15
76
9
46
0
43
1.37
26641--26762
40
3.0
40
83
5
154
8
45
1
44
1.43
40639--40690
23
2.4
22
78
15
54
7
44
9
38
1.66

Tables:   1

The End!