Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2257
Parameters: 2 7 7 80 10 50 1000
Length:  5946

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--482
29
17.0
29
87
7
647
27
31
18
22
1.97
1--482
85
5.7
83
84
8
616
27
31
18
22
1.97
981--1056
39
2.0
38
84
2
98
31
13
14
40
1.84
1953--2008
21
2.5
23
85
14
89
17
10
8
62
1.52
1962--2015
21
2.6
21
85
2
65
20
9
9
61
1.54
4291--4885
28
20.9
28
81
7
621
21
17
30
30
1.96
4292--4885
142
4.2
144
83
5
690
21
17
30
30
1.96
4641--4720
32
2.6
31
86
5
108
18
16
33
31
1.93

Tables:   1

The End!