Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2264
Parameters: 2 7 7 80 10 50 1000
Length:  27597

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
941--1293
58
6.1
58
75
5
255
45
15
10
27
1.80
959--1280
116
2.8
116
81
4
310
46
15
10
27
1.79
800--1293
174
2.8
173
79
5
505
45
15
11
27
1.81
7325--7362
20
1.9
20
94
0
67
36
15
7
39
1.77
7405--7468
32
2.0
33
87
3
94
40
17
15
26
1.89
7457--7495
20
1.9
21
94
5
71
25
15
23
35
1.94
10141--10202
32
1.9
33
83
9
83
35
16
11
37
1.84
10268--10298
13
2.4
13
94
0
53
35
16
9
38
1.81
12415--12475
21
2.9
21
87
0
77
65
0
16
18
1.27
12490--12545
21
2.7
21
76
15
62
50
12
16
21
1.78
13597--13661
32
2.0
32
84
3
85
26
16
16
40
1.90
15976--16023
21
2.3
21
82
7
62
62
4
12
20
1.46
19928--19971
13
3.4
13
93
0
79
31
15
15
36
1.90
24997--25197
52
3.9
52
95
1
341
29
17
19
33
1.95
25186--25210
13
1.9
13
100
0
50
36
16
16
32
1.90
25273--25297
13
1.9
13
100
0
50
32
16
16
36
1.90
25355--25396
21
2.0
21
90
0
66
35
14
14
35
1.86
26076--26458
171
2.2
173
92
1
644
37
14
24
24
1.93
26305--26516
52
4.2
52
76
12
208
33
16
25
24
1.96
26412--26501
43
2.1
43
93
0
153
31
17
24
26
1.97
26505--27056
30
19.0
29
84
9
603
23
17
27
31
1.97
26507--27056
89
6.3
86
86
5
655
23
17
27
31
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26512--27060
204
2.7
204
95
0
974
22
17
27
31
1.97

Tables:   1

The End!