Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2268
Parameters: 2 7 7 80 10 50 1000
Length:  47525

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
396--455
24
2.5
23
76
12
59
46
0
3
50
1.18
900--932
16
2.0
17
88
5
50
33
6
6
54
1.50
926--976
22
2.4
21
81
9
68
56
0
0
43
0.99
9687--9729
22
2.0
22
85
0
59
60
30
2
6
1.35
9903--9946
2
22.0
2
95
0
79
50
2
47
0
1.13
10236--10267
15
2.1
15
94
0
55
43
0
0
56
0.99
10241--10275
15
2.4
15
90
4
54
42
0
0
57
0.99
11362--11409
2
24.0
2
100
0
96
50
0
0
50
1.00
17033--17095
20
2.9
22
71
22
60
58
0
0
41
0.98
18525--18556
11
2.9
11
100
0
64
53
0
0
46
1.00
18547--18593
20
2.4
19
79
10
51
34
0
4
61
1.15
18536--18619
25
3.4
25
74
11
82
39
0
2
58
1.11
27089--27152
20
3.1
20
76
24
62
34
1
4
59
1.28
32873--32917
18
2.4
19
81
7
56
48
0
0
51
1.00
33610--33634
2
12.5
2
100
0
50
52
0
0
48
1.00
34080--34136
3
18.7
3
89
3
87
31
1
1
64
1.13
34179--34217
16
2.4
17
86
4
53
61
0
0
38
0.96
34733--34779
24
1.9
25
83
12
62
51
2
0
46
1.13

Tables:   1

The End!