Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2271
Parameters: 2 7 7 80 10 50 1000
Length:  3023

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
183--226
1
44.0
1
86
0
52
90
0
0
9
0.44
183--227
13
3.5
13
87
3
65
88
0
0
11
0.50
182--226
19
2.4
19
92
3
74
88
0
0
11
0.50
183--226
18
2.4
18
89
10
72
90
0
0
9
0.44
226--307
21
4.1
20
85
6
112
37
17
12
32
1.86
226--307
41
2.0
40
88
6
121
37
17
12
32
1.86
343--410
19
3.9
19
74
21
76
36
11
13
38
1.81
345--407
32
2.0
32
93
0
108
36
12
14
36
1.84
345--560
85
2.5
85
94
2
371
34
14
16
35
1.89
430--495
19
3.8
18
73
22
70
37
12
13
36
1.82
428--492
32
2.0
32
93
0
112
38
12
13
35
1.83
535--560
13
2.0
13
100
0
52
30
15
15
38
1.88
515--581
33
2.0
33
88
0
98
25
14
16
43
1.86

Tables:   1

The End!