Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2277
Parameters: 2 7 7 80 10 50 1000
Length:  31822

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5792--5866
20
3.8
20
80
3
80
40
12
13
34
1.81
5789--5866
40
2.0
39
87
2
111
39
12
12
34
1.82
8113--8139
10
2.7
10
100
0
54
77
22
0
0
0.76
12254--12402
52
2.9
51
88
4
226
30
17
18
33
1.94
12391--12415
13
1.9
13
100
0
50
36
16
16
32
1.90
12478--12502
13
1.9
13
100
0
50
32
16
16
36
1.90
12460--12522
33
1.9
33
86
0
90
41
15
11
31
1.83
26317--26428
28
4.0
28
85
6
163
33
32
16
17
1.93
26323--26435
57
2.0
57
96
0
208
31
30
16
21
1.95
26413--26735
33
10.1
33
77
10
321
19
32
13
35
1.90
26381--26713
60
5.3
60
79
8
272
21
32
14
31
1.93
26437--26710
93
2.9
94
80
10
310
20
33
12
33
1.90
26809--26872
21
3.0
21
64
28
53
26
25
18
29
1.98
26749--27250
49
11.1
42
71
19
268
24
23
19
31
1.98
26892--27146
87
2.9
88
85
3
336
25
25
20
29
1.99
26749--27244
273
1.8
267
82
3
625
24
23
19
31
1.98
27063--27344
49
5.7
49
79
5
255
23
25
17
32
1.97
27059--27371
98
3.2
98
80
5
319
23
26
17
32
1.97

Tables:   1

The End!