Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2280
Parameters: 2 7 7 80 10 50 1000
Length:  26823

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--116
52
2.2
52
95
0
203
36
17
17
28
1.93
5735--5769
15
2.4
15
90
4
54
65
0
0
34
0.93
5725--5766
20
2.0
20
86
9
57
69
0
0
30
0.89
5710--5764
21
2.6
22
80
13
71
69
0
0
30
0.89
6622--6671
23
2.3
23
82
6
59
36
0
2
62
1.07
6700--6765
32
2.0
33
85
8
91
42
4
3
50
1.38
6755--6791
15
2.4
16
90
4
58
37
5
0
56
1.22
12544--13055
58
8.9
57
73
7
202
32
15
19
32
1.93
12544--13667
115
9.8
113
74
7
641
32
14
19
32
1.92
12638--13699
57
18.5
57
74
7
641
32
14
19
32
1.92
20436--20508
20
3.7
19
87
7
85
28
15
17
38
1.90
20549--20578
13
2.3
13
94
0
51
36
16
13
33
1.88
24237--24286
23
2.2
23
82
7
57
46
0
0
54
1.00
24641--24681
21
2.1
19
86
9
55
48
2
2
46
1.28
25280--25326
24
2.0
24
83
8
60
42
0
2
55
1.12
26358--26439
16
5.1
15
72
10
56
50
3
6
40
1.45
26470--26499
15
2.0
15
100
0
60
60
0
0
40
0.97

Tables:   1

The End!