Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2290
Parameters: 2 7 7 80 10 50 1000
Length:  23053

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2668--2707
20
2.0
20
95
0
71
40
15
2
42
1.60
4754--4783
2
15.0
2
100
0
60
0
50
0
50
1.00
4925--4955
16
1.9
16
100
0
62
48
0
0
51
1.00
4925--4981
25
2.3
26
75
9
64
45
0
0
54
0.99
4960--5035
16
4.7
16
79
9
91
44
1
2
51
1.23
5351--5396
20
2.2
22
88
7
69
36
0
2
60
1.09
5781--5814
16
2.2
15
89
5
50
58
2
0
38
1.13
5845--5896
24
2.3
23
83
12
63
63
1
3
30
1.23
6961--7199
94
2.5
95
84
6
315
34
12
23
28
1.92
9042--9067
13
2.0
13
100
0
52
38
15
15
30
1.88
9024--9087
32
2.0
33
90
3
103
39
18
14
28
1.90
10733--10788
20
2.6
22
88
5
80
42
12
16
28
1.84
11558--11622
33
2.0
31
82
11
78
46
4
0
49
1.22
11616--11661
22
2.1
22
83
0
56
36
2
6
54
1.39
19634--19690
13
3.9
13
76
24
60
35
14
17
33
1.90
19612--19713
19
6.1
17
71
28
85
35
11
16
36
1.86
19614--19710
32
3.0
32
95
1
167
36
12
16
35
1.86
19752--19776
13
1.9
13
100
0
50
32
16
16
36
1.90
19785--19913
52
2.5
52
97
0
240
34
18
18
28
1.95

Tables:   1

The End!