Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2295
Parameters: 2 7 7 80 10 50 1000
Length:  53872

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6308--6373
34
1.9
34
84
3
87
45
4
12
37
1.62
6387--6493
29
3.7
29
75
19
114
47
2
8
41
1.48
7019--7291
113
2.4
111
81
7
307
36
10
9
43
1.71
7208--7269
33
1.9
33
93
3
108
32
6
4
56
1.46
9005--9060
19
2.9
20
78
10
62
41
1
0
57
1.09
10010--10055
20
2.3
20
84
0
56
32
4
52
10
1.56
12080--12125
21
2.1
22
84
4
58
19
30
19
30
1.97
14578--14623
20
2.3
20
84
0
56
32
4
52
10
1.56
15177--15220
2
22.0
2
85
0
61
52
2
0
45
1.13
15822--15866
2
22.5
2
93
0
72
48
2
2
46
1.26
17661--17703
2
21.5
2
90
0
68
48
0
4
46
1.22
18916--18966
11
4.7
11
75
4
50
82
0
15
1
0.76
18918--18966
21
2.3
21
89
3
71
81
0
16
2
0.78
19186--19260
20
3.8
20
80
0
96
33
13
12
41
1.81
19186--19263
40
2.0
39
89
2
120
33
12
12
41
1.82
26191--26266
20
3.7
20
73
13
73
32
11
11
43
1.78
26167--26267
22
4.8
21
72
17
68
34
10
11
42
1.77
26166--26267
42
2.4
42
90
0
159
35
10
11
42
1.77
26768--27181
58
7.1
58
77
10
407
28
15
13
42
1.84
26774--27176
59
6.9
57
75
12
259
28
15
12
43
1.83
26768--27225
117
3.9
117
79
7
362
29
14
12
43
1.83
29508--29554
24
2.0
24
91
0
76
34
0
12
53
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31712--31758
19
2.5
20
83
10
55
55
0
0
44
0.99
31722--31758
19
1.9
19
89
10
58
56
0
0
43
0.99
32008--32047
2
20.0
2
89
0
62
50
0
0
50
1.00
34151--34207
24
2.5
23
80
8
64
38
1
5
54
1.33
36143--36461
74
4.4
72
80
9
301
52
13
2
31
1.53
36142--36482
147
2.3
145
80
5
382
53
13
2
31
1.53
36766--36811
23
2.0
23
91
8
76
65
13
0
21
1.26
43873--43912
20
2.0
20
100
0
80
35
10
5
50
1.58
44441--44508
29
2.3
29
80
7
77
57
1
4
36
1.28
45688--45720
2
16.5
2
100
0
66
48
0
0
51
1.00
46258--46288
9
3.4
9
100
0
62
19
0
0
80
0.71
48156--48190
2
17.5
2
100
0
70
48
0
0
51
1.00
52903--52959
19
2.9
18
78
14
60
68
5
0
26
1.11
53076--53124
26
1.9
26
87
4
73
0
20
2
77
0.87
53665--53705
17
2.4
17
88
8
57
26
14
9
48
1.75

Tables:   1

The End!