Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2297
Parameters: 2 7 7 80 10 50 1000
Length:  12166

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4949--5008
21
2.9
21
82
5
68
33
23
5
38
1.76
8321--8365
21
2.1
21
84
8
56
33
22
4
40
1.74
8618--8681
3
21.0
3
96
3
119
67
0
0
32
0.91
8664--8723
31
1.9
32
83
10
79
60
8
1
30
1.36
9227--9261
2
17.5
2
100
0
70
51
0
0
48
1.00
9464--9511
14
3.4
14
85
5
62
39
0
0
60
0.97
9453--9513
14
4.4
14
79
6
61
36
1
0
62
1.05
9486--9526
8
5.4
8
85
8
59
43
0
0
56
0.99
9960--10001
21
2.0
21
86
13
61
59
0
0
40
0.97
9947--10114
90
1.9
89
93
3
293
47
1
2
48
1.25
11771--11800
15
1.9
16
93
6
53
3
23
0
73
0.98

Tables:   1

The End!