Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2302
Parameters: 2 7 7 80 10 50 1000
Length:  61595

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--49344
508
96.4
508
92
4
80155
27
25
19
27
1.99
50324--50525
78
2.6
79
82
3
228
29
16
29
24
1.97
50481--50548
28
2.4
28
87
0
91
25
19
32
23
1.97
50537--50706
52
3.3
52
78
9
177
32
12
24
29
1.93
50693--50760
26
2.5
26
86
9
84
23
22
29
25
1.99
50423--50815
104
3.7
104
72
14
291
31
14
26
27
1.95
50751--50878
51
2.4
51
79
11
141
33
10
24
32
1.89
50470--50875
212
1.9
212
88
4
622
31
13
26
28
1.94
50537--50873
106
3.2
102
70
16
258
32
12
25
30
1.92
53232--53257
13
2.0
13
100
0
52
38
15
15
30
1.88
53211--53277
33
2.0
33
88
0
98
43
16
14
25
1.86
53297--53364
19
3.9
18
76
23
83
38
14
11
35
1.83
53319--53343
13
1.9
13
100
0
50
32
16
16
36
1.90
53300--53362
32
2.0
32
96
0
117
36
15
12
34
1.86
53420--53476
21
2.7
21
97
0
105
36
19
10
33
1.86
53481--53528
1
48.0
1
93
0
69
4
2
0
93
0.39
53479--53525
24
2.0
24
100
0
94
8
2
0
89
0.57
54123--54855
55
13.3
54
91
4
1100
20
20
30
29
1.98
55837--55884
1
48.0
1
78
0
51
0
4
6
89
0.58
55837--55882
12
3.8
12
88
5
65
0
4
6
89
0.60

Tables:   1

The End!