Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2303
Parameters: 2 7 7 80 10 50 1000
Length:  30060

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
316--340
2
12.5
2
100
0
50
52
0
0
48
1.00
634--665
14
2.4
14
94
5
57
56
0
0
43
0.99
3966--4309
171
2.0
171
98
0
670
24
26
19
29
1.98
4935--4964
15
2.0
15
93
0
51
36
43
6
13
1.70
5979--6096
60
2.0
60
93
0
200
32
28
16
22
1.96
7001--7030
15
2.0
15
93
0
51
53
16
13
16
1.73
7974--8012
3
13.0
3
100
0
78
33
0
0
66
0.92
8926--8953
3
9.3
3
100
0
56
32
0
0
67
0.91
9059--9123
29
2.3
28
87
10
89
53
0
0
46
1.00
9066--9143
37
2.2
35
86
11
106
51
0
0
48
1.00
9071--9153
29
2.8
29
76
12
78
55
0
0
44
0.99
9087--9169
37
2.2
37
80
4
96
56
0
0
43
0.99
9803--9883
27
3.1
26
69
13
60
46
4
0
48
1.23
11740--11786
21
2.2
21
81
11
51
55
2
2
40
1.24
12720--12768
20
2.6
18
80
6
53
51
0
2
46
1.12
13241--13276
17
2.1
18
89
5
56
50
2
0
47
1.15
13314--13363
20
2.4
21
80
6
57
62
2
0
36
1.07
15456--15589
67
2.0
67
100
0
268
28
13
17
40
1.88
20167--20212
17
2.6
18
76
13
51
54
0
0
45
0.99
21866--21901
19
1.9
19
88
5
56
50
0
0
50
1.00
28777--28881
2
53.5
2
81
7
126
48
4
44
1
1.34

Tables:   1

The End!