Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2304
Parameters: 2 7 7 80 10 50 1000
Length:  38444

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
725--766
21
2.0
21
86
4
59
23
14
11
50
1.76
3685--3715
3
10.7
3
93
6
55
32
0
0
67
0.91
6894--6966
23
3.2
23
64
24
64
50
19
8
21
1.73
6891--6982
45
2.0
45
97
0
175
50
17
7
25
1.72
16533--16578
23
2.0
23
95
0
83
39
6
28
26
1.81
19170--19210
17
2.3
18
84
15
59
36
0
0
63
0.95
19203--19253
20
2.6
20
87
3
68
58
0
0
41
0.98
19352--19391
21
2.0
20
90
9
64
27
5
7
60
1.45
22705--22772
1
68.0
1
76
0
55
2
8
1
86
0.73
22710--22771
8
7.8
8
78
10
65
1
9
1
87
0.69
23480--23525
23
2.1
22
88
11
69
30
0
2
67
1.03
25366--25394
12
2.5
12
94
5
51
10
24
6
58
1.55
27956--28209
136
1.9
136
92
3
431
26
12
19
41
1.87
29215--29253
8
5.0
8
87
6
53
84
0
12
2
0.72
29215--29253
15
2.5
15
91
4
60
84
0
12
2
0.72
30734--30760
2
13.5
2
100
0
54
48
0
51
0
1.00
32451--32485
2
17.5
2
87
0
52
42
0
2
54
1.15
32629--32670
2
21.0
2
95
0
75
50
2
0
47
1.14
36279--37280
57
17.8
57
83
8
1189
28
32
17
21
1.96
36279--37258
28
34.9
28
84
6
1177
27
32
18
21
1.96
37885--37955
20
3.6
19
82
3
79
38
12
8
40
1.74

Tables:   1

The End!