Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2310
Parameters: 2 7 7 80 10 50 1000
Length:  38948

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
678--702
12
2.1
12
100
0
50
32
16
16
36
1.90
658--720
31
2.0
31
87
6
92
30
15
15
38
1.89
741--815
21
3.7
21
76
7
91
29
17
12
41
1.85
741--833
40
2.3
41
94
3
170
30
18
12
38
1.88
762--833
20
3.6
20
77
7
92
31
19
13
34
1.91
1435--1480
16
2.8
16
93
6
74
30
39
2
28
1.69
2969--3006
20
1.9
20
89
10
60
47
0
0
52
1.00
3011--3071
27
2.3
27
80
13
72
47
1
3
47
1.28
3265--3292
7
4.0
7
100
0
56
57
0
0
42
0.99
3733--3757
13
1.9
13
100
0
50
48
0
0
52
1.00
4095--4137
18
2.4
18
76
3
52
48
0
2
48
1.14
4106--4146
21
1.9
22
90
5
66
48
0
0
51
1.00
4284--4336
18
2.9
17
78
18
54
45
0
1
52
1.11
4398--4437
14
2.9
14
85
3
55
52
0
2
45
1.14
4690--4748
23
2.6
22
81
10
66
45
0
0
54
0.99
4713--4779
34
2.0
33
82
11
82
44
1
0
53
1.09
13565--14252
350
2.0
350
98
0
1331
27
20
17
35
1.95
21929--21955
13
2.1
13
100
0
54
29
7
14
48
1.71
23637--23673
3
12.3
3
91
0
56
37
2
32
27
1.71
30121--30179
21
2.6
23
76
17
61
42
1
28
27
1.65
30804--30854
20
2.6
19
90
3
75
25
15
17
41
1.89
30805--30854
19
2.5
20
90
3
75
26
16
18
40
1.90

Tables:   1

The End!