Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2313
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 13326
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Found at i:3274 original size:508 final size:508
Alignment explanation
Indices: 15--13326 Score: 25077
Period size: 508 Copynumber: 26.2 Consensus size: 508
5 AACCTGGAAA
* * * *
15 AAACTCA-TTTTTTCTTCGTAATCGCCGCCAATCGGCTCTTCATCACGGCGAAGCATTAGTCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
79 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
* * *
144 TCAGAAACGGCC-AAGAGGGGCAGCTATAGACACCTCATTTTGTCCGAGCTAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
* * *
208 TGAGGCCTAGCTAGTATGGTGAAAGATTCGCCGTATGTGGCGACGAATTGGTGA-CGTAAATCAG
196 TGAGGCCTAGCTAGTA-GGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAG
*
272 CACATTGACATCC-TTTTCTCATATTTAAACCCAATATCGTTGGTCGTGAATCAACGTATTGGTC
260 CACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTC
*
336 C-TTTATCACTCTTCATCCTCATCATCTTTAAGTCTAGTGTTGCAGGGCCTTGAATCTGCATAGT
325 CTTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGC-GGGCCTTGAATCTGCATAGT
*
400 GGCACATTG-AATTGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACAGCTAT
389 GGCACATTGCAA-TGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTAT
* *
464 CTAAGGAGGTCAAGCCTTAGAAAATTCCTAAACCTAGTAGGGAGGAC-AA-CCTCC
453 CTAAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
*
518 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGTGAAGCA-TAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
* * *
582 CAAAGGTCA-AACATGCGGTCGCGGAAAACAATGGTGTCTA-TTGTCTTTGGCCTATTCCTGATA
66 CAAAGGTCATAACATGCGGCCGCGGACAA-AATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATA
*
645 CTCAGAAACGGCCAAAGAGGGGCAGCTGTAGACA-CTCCATTTTGTCCGGGCCAATTTTTGACAA
130 CTCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCT-CATTTTGTCCGGGCCAATTTTCGACAA
* * *
709 TTTGAGCCCTAGCTAGTAGATGGAAGATTCGACGTATGTGGGGACGAATTAGTGACCGTAAATCA
194 TTTGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCA
* *
774 GCACAATGACATCATTTTTCTCATATTTAAACCC-ATATCGTTGGCCGTGAATC-ACGTATTGGT
259 GCACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGT
* * * *
837 CCTTTTATCACTCTTCATCGTCATCATCTTTAAGTCAAATGTTGCGGGCCTATTGAATCGGCATA
324 CCTTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCC--TTGAATCTGCATA
*
902 GTGGCACAGTGCAATGACCATAATCTTCC-AAAT-CCTTCCAAACTCTACACCAATCTACACCTA
387 GTGGCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTA
*
965 TTTAAGGAGGTCAAGGCCTTAGAAAATTCC-AAACCTAGTAGGGAGGACAAACCCTAC
452 TCTAAGGAGGTCAA-GCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
1022 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1087 CAAAGGTCCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATA
66 CAAAGGT-CATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATA
* * * ** *
1152 CTTAGAAACGGCCAAAGAGGGGCAGCTATAGACACCTCATTTCGTCCGATCCTAATTCTCGACAA
130 CTCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCC-AATTTTCGACAA
*
1217 TTTGAGG-CTAGCTAGTAGGTGAAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCA
194 TTTGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCA
*
1281 GCACATTGACATCCTTTTTCTCATATTTAAACTCAATATCGTTGGCCGTGAATC-ACGTATTGGT
259 GCACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGT
*
1345 CCTTTAATCACTCTTCCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAG
324 CCTTTTATCACTCTT-CATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAG
*
1410 TGGC-CTAGTGCAAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCT
388 TGGCAC-ATTGC-AATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCT
* *
1474 ATTTAAGGAGGTCAAGCCTTATAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
451 ATCTAAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
1532 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
*
1597 CAAAGGTCATAACATGCGGTCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
* * *
1662 TCAGAAACGACCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGAGCTAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
*
1727 TGAGGCCTAGCTAGTAGGTGAAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
1792 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
*
1857 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGAGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
*
1922 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAAACTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
1987 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
2040 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
2105 CAAAGGTCATAACATGCGGCCGCAGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATA
66 CAAAGGTCATAACATGCGGCCGC-GGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATA
*
2170 CTCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTTCCAGGCCAATTTTCGACAA
130 CTCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTG-TCCGGGCCAATTTTCGACAA
2235 TTTGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCA
194 TTTGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCA
2300 GCACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGT
259 GCACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGT
2365 CCTTTTATCACTCTTCATCCTCATCATCTTTAAGTCCTAGTGTTGCGGGCCTTGAATCTGCATAG
324 CCTTTTATCACTCTTCATCCTCATCATCTTTAAGTCC-AGTGTTGCGGGCCTTGAATCTGCATAG
2430 TGGCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTAT
388 TGGCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTAT
*
2495 TTAAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
453 CTAAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
2551 AAACTCATTTTTTTCATC-GAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
2615 CAAAGGTCATAACATGCGGTCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATA
66 CAAAGGTCATAACATGCGG-CCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATA
* * ** *
2680 CTTAGAAACGGCCAAAGAGGGGCAGCTATAGACACCTCATTTTGTCCGATCTAATTTTCGACAAT
130 CTCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAAT
*
2745 TTGAGGCCTAGCTAGTAGGTGAAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAG
195 TTGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAG
2810 CACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTC
260 CACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTC
2875 CTTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGC-GGCCTTGAATCTGCATAGTG
325 CTTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTG
*
2939 GCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATTT
390 GCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCT
*
3004 AAGGAGGTCAAGCCTTATAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
455 AAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
3058 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
3123 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
* *
3188 TCAGAAACGGACCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGAGCTAATTTTCGACAAT
131 TCAGAAACGG-CCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAAT
*
3253 TTGAGGCCTAGCTAGTAGGTGAAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAG
195 TTGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAG
3318 CACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTC
260 CACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTC
*
3383 CTTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCAGGCCTTGAATCTGCATAGTG
325 CTTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTG
*
3448 GCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACAGCTATCT
390 GCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCT
3513 AAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
455 AAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
3567 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
3632 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
*
3697 TCAGAAACTGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGT-CGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
3761 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
3826 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
3891 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
*
3956 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATTTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
4021 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
4074 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
4139 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
* * *
4204 TCAGAAACGGCCAAAGAGGGGCAGCTATAGACACCTCATTTTGTCCGAGCTAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
4269 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
4334 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
4399 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
4464 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
4529 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
4582 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
*
4647 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTATTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
4712 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
4777 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
*
4842 ACATTGACATCCTTTTTCTCATCTTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
*
4907 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCAAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
4972 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
5037 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
5090 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
5155 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
5220 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGT-CGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
5284 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
5349 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
5414 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
*
5479 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATTTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
5544 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
5597 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
5662 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
* * * * *
5727 TCAGAAATGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTTTCCGAGCTAATTTTCGAAAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
5792 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
5857 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
*
5922 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGTGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
5987 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
6052 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
6105 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
6170 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
6235 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
6300 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
6365 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
6430 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
*
6495 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATTTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
6560 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
6613 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
6678 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
* *
6743 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGAGCTAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
*
6808 TGAGGCCTAGCTAGTAGGTGAAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
6873 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
6938 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
*
7003 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATTTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
7068 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
7121 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
7186 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
* *
7251 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGAGCTAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
7316 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
7381 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
7446 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGAGGCCTTGAATCTGCATAGTG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCG-GGCCTTGAATCTGCATAGTG
*
7511 GCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAAACTACACCTATCT
390 GCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCT
*
7576 AAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACTCTAC
455 AAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
*
7630 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAGGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
*
7695 CAAAGGTCATAACATGCGGCCGCAGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
* * * *
7760 TCAGAAATGGCCAAAGAGGGGCAGCTGTAAACACCGCATTTTGTTCGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
*
7825 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGATGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
7890 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
7955 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
8020 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
8085 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
8138 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
8203 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
8268 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGT-CGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
8332 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
8397 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
8462 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
8527 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
8592 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
8645 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
8710 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
8775 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGT-CGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
8839 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
8904 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
8969 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
9034 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
9099 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
9152 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
9217 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
*
9282 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTTCGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
9347 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
9412 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
9477 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
9542 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
9607 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
9660 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
9725 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
9790 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
9855 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
9920 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
9985 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
10050 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
10115 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
10168 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
10233 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
*
10298 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTTCGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
10363 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
10428 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
10493 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
10558 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
10623 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
10676 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
10741 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
10806 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGT-CGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
10870 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
10935 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
11000 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
11065 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
11130 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
11183 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
11248 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
11313 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
11378 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
*
11443 ACATTGACATCCTTTTTCTCATCTTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
11508 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
11573 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
11638 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
11691 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
11756 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
*
11821 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTTCGGG-CAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
11885 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
11950 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
12015 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
12080 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
391 CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
12145 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
456 AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
12198 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
12263 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
**
12328 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGATCAATTTTCGACAATT
131 TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
12393 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
196 TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
12458 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
261 ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
12523 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAAGTGTTGCGGGCCTTGAATCTGCATAGTG
326 TTTTATCACTCTTCATCCTCATCATCTTTAAGTCC-AGTGTTGCGGGCCTTGAATCTGCATAGTG
12588 GCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCT
390 GCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCT
*
12653 AAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGAGAAACCCTAC
455 AAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
12707 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
12772 CAAAGGTCATAACATGCGGCCGCGGAC-AAATGGTGTCTATTTGTC-TTGGCCTGTTCCTGATAC
66 CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
*
12835 TCAGAAACGGCCAAAGAGAGGGCAGCTGTATGACAACCCTCATTTTGTTCGGG-CAATTTTCGAC
131 TCAGAAACGGCCAAAGAG-GGGCAGCTGTA-GAC-A-CCTCATTTTGTCCGGGCCAATTTTCGAC
* *
12899 AATTTGAGGCCTAGCTAGAAGGGTGGAAGATTCGACGTATGTGGGGATGAATTGGTGACCGTAAA
192 AATTTGAGGCCTAGCTAGTA-GGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAA
*
12964 TCAGCACATTGACATACTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTG-ATCAACGTATT
256 TCAGCACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATT
* *
13028 GGTCC-TTTATCACTCTTCAT-CTCATC-TCTTTAACTCAAGTGTTGCGGGCCTTGAATCTGCAT
321 GGTCCTTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCAT
*
13090 AGTGGCACATTGCAATGACCATAATCTTCCAAAATCCCTT-CACACTCTACACCAATCTACACCT
386 AGTGGCACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCT
13154 ATCTAAGGA-GTC-AGCCTT-GAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
451 ATCTAAGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
13209 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTTCATCACGGCGAAGCATTAATCAC
1 AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTC-TTCATCACGGCGAAGCATTAATCAC
* * *
13274 CCAAAGGTCATAACATGTGGCCACAGACACAAATGG-GTCTATTTGTC-TTGGCC
65 CCAAAGGTCATAACATGCGGCCGCGGACA-AAATGGTGTCTATTTGTCTTTGGCC
Statistics
Matches: 12587, Mismatches: 171, Indels: 101
0.98 0.01 0.01
Matches are distributed among these distances:
502 238 0.02
503 249 0.02
504 179 0.01
505 55 0.00
506 79 0.01
507 3471 0.28
508 5882 0.47
509 1612 0.13
510 546 0.04
511 276 0.02
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (508 bp):
AAACTCATTTTTTTCATCGGAATCGCCGCCAATAGGCTCTTCATCACGGCGAAGCATTAATCACC
CAAAGGTCATAACATGCGGCCGCGGACAAAATGGTGTCTATTTGTCTTTGGCCTGTTCCTGATAC
TCAGAAACGGCCAAAGAGGGGCAGCTGTAGACACCTCATTTTGTCCGGGCCAATTTTCGACAATT
TGAGGCCTAGCTAGTAGGTGGAAGATTCGACGTATGTGGGGACGAATTGGTGACCGTAAATCAGC
ACATTGACATCCTTTTTCTCATATTTAAACCCAATATCGTTGGCCGTGAATCAACGTATTGGTCC
TTTTATCACTCTTCATCCTCATCATCTTTAAGTCCAGTGTTGCGGGCCTTGAATCTGCATAGTGG
CACATTGCAATGACCATAATCTTCCAAAATCCCTTCCAAACTCTACACCAATCTACACCTATCTA
AGGAGGTCAAGCCTTAGAAAATTCCAAAACCTAGTAGGGAGGACAAACCCTAC
Done.