Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2315
Parameters: 2 7 7 80 10 50 1000
Length:  114569

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1665--2739
323
3.3
321
78
13
918
33
18
15
32
1.92
6219--95226
317
282.5
317
83
6
92395
36
14
17
31
1.90
1663--95226
936
99.5
937
85
5
113755
36
14
17
31
1.90
4--114364
619
181.5
620
82
7
114133
36
15
16
31
1.90
52591--53709
158
7.1
158
70
8
867
37
14
16
31
1.89
53940--54741
159
5.1
158
69
9
500
37
14
17
30
1.90
55333--56777
158
9.2
159
67
11
618
36
14
17
31
1.89
58185--59303
158
7.1
158
70
8
867
37
14
16
31
1.89
70312--94903
158
157.0
155
65
13
7112
36
14
16
31
1.89
99411--99528
41
2.8
42
90
2
193
9
45
1
43
1.46
99456--99498
9
4.6
9
85
5
50
11
44
2
41
1.53
101147--114358
317
42.2
316
84
4
16192
36
14
17
31
1.90
101147--101861
159
4.5
158
69
10
465
37
14
16
31
1.88
101147--114071
936
13.8
935
85
4
16397
36
14
17
31
1.90
105348--113648
158
53.1
155
64
15
1552
36
14
17
31
1.90

Tables:   1

The End!