Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2316
Parameters: 2 7 7 80 10 50 1000
Length:  27161

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4489--4541
19
2.9
18
82
2
61
49
33
0
16
1.47
8197--8251
5
10.4
5
82
5
56
52
1
0
45
1.11
8468--8527
17
3.5
17
77
6
68
53
0
0
46
1.00
8574--8623
19
2.9
17
75
13
57
36
0
0
64
0.94
8576--8645
18
4.1
18
72
24
62
34
0
0
65
0.93
8634--8681
18
2.7
18
81
9
53
50
0
2
47
1.12
16858--16897
2
20.0
2
90
10
64
50
2
0
47
1.14
19183--19225
19
2.4
17
80
7
50
58
4
0
37
1.19
24131--24201
11
6.2
12
77
11
60
47
1
4
46
1.30
24161--24201
11
3.7
11
93
6
66
46
0
2
51
1.14
24131--24201
2
37.0
2
72
13
60
47
1
4
46
1.30

Tables:   1

The End!