Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2327
Parameters: 2 7 7 80 10 50 1000
Length:  26122

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
210--424
64
3.4
63
83
9
262
22
28
17
31
1.96
180--424
30
7.9
31
76
11
216
23
28
16
31
1.96
426--690
34
8.0
33
77
13
235
18
34
13
33
1.90
466--650
96
1.9
95
93
1
316
19
34
15
30
1.92
400--735
130
2.6
129
87
1
451
19
35
14
31
1.91
493--715
96
2.3
90
80
15
229
18
34
13
32
1.90
720--1008
32
8.9
32
83
5
323
28
31
18
22
1.97
723--1008
65
4.4
65
86
7
395
28
31
18
21
1.97
723--1008
131
2.2
129
88
5
416
28
31
18
21
1.97
1017--2047
43
21.9
45
76
14
823
24
26
17
30
1.98
1018--2045
92
11.0
92
87
8
1409
25
26
17
30
1.98
1014--2045
196
5.5
189
88
6
1418
24
26
17
30
1.97
2888--2912
13
1.9
13
100
0
50
44
16
8
32
1.76
2868--2933
32
2.0
33
88
2
98
37
12
13
36
1.82
2987--3134
52
2.9
51
93
3
251
33
18
17
29
1.94
9721--9773
19
2.8
20
85
8
83
35
15
18
30
1.92
9762--9786
13
1.9
13
100
0
50
40
20
16
24
1.91
10378--10474
48
2.0
48
88
4
142
34
20
2
43
1.64
10411--10448
20
2.0
20
89
5
60
34
21
0
44
1.52
10431--10495
28
2.3
28
84
5
78
38
15
4
41
1.68
12412--12451
20
2.0
21
90
5
64
32
17
12
37
1.87
16907--16937
12
2.6
12
94
0
53
29
25
0
45
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18535--18567
17
1.9
17
100
0
66
42
18
12
27
1.85
20549--20597
19
2.5
20
80
3
55
34
16
12
36
1.86
20646--20682
13
2.8
14
80
16
51
29
13
21
35
1.92
21099--21142
23
1.9
23
86
9
63
29
9
25
36
1.86
22283--22313
15
2.1
15
93
0
53
32
0
32
35
1.58

Tables:   1

The End!