Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2332
Parameters: 2 7 7 80 10 50 1000
Length:  56419

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
847--1071
51
4.4
51
83
7
258
33
23
9
33
1.87
847--1071
104
2.2
104
85
4
303
33
23
9
33
1.87
2550--2622
20
3.6
20
81
5
76
36
8
19
35
1.81
7195--7393
103
1.9
105
82
2
249
22
21
17
38
1.93
7195--7393
52
3.8
52
79
1
202
22
21
17
38
1.93
7197--7410
105
2.1
103
80
1
230
22
21
16
39
1.92
8044--8097
20
2.7
20
82
2
63
37
11
20
31
1.88
26004--26108
20
4.7
20
71
22
75
40
13
17
29
1.87
26004--26159
71
2.2
71
91
2
251
41
12
17
28
1.86
27393--28618
28
41.7
28
75
11
712
24
16
28
29
1.97
27464--27638
63
2.8
63
94
1
298
25
15
29
29
1.96
27498--27610
35
3.4
35
75
16
141
28
14
28
29
1.95
27381--28641
57
21.5
57
77
10
817
24
16
29
29
1.97
27381--28313
32
31.3
31
76
12
480
25
16
27
30
1.97
27676--28618
148
6.4
148
75
10
537
23
17
29
29
1.97
27538--28622
85
12.4
84
72
11
553
24
17
28
29
1.97
27596--28793
28
41.8
28
75
9
432
25
16
29
28
1.97
28616--28812
82
2.4
81
88
3
288
35
11
27
24
1.91
28609--28818
27
7.7
27
84
2
251
33
11
29
25
1.91
30113--30162
22
2.3
22
83
13
59
6
12
8
74
1.22
34332--35417
547
2.0
547
100
0
2172
38
14
20
26
1.91
41728--41894
80
2.1
80
100
0
334
37
12
14
35
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50731--50780
2
25.0
2
91
0
82
50
0
2
48
1.12
52188--52245
16
3.6
16
88
9
82
34
0
5
60
1.19
52692--52780
5
17.0
5
74
15
56
16
3
2
77
1.01
52694--52755
19
3.4
18
77
16
58
16
3
1
79
0.95
52692--52780
30
3.0
30
75
21
89
16
3
2
77
1.01

Tables:   1

The End!