Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2333
Parameters: 2 7 7 80 10 50 1000
Length:  25681

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3072--3097
13
2.0
13
100
0
52
30
15
15
38
1.88
4134--4181
21
2.3
20
80
19
55
47
0
0
52
1.00
5769--5812
21
2.0
21
86
8
61
43
0
0
56
0.99
5775--5817
21
2.0
21
91
8
70
41
0
0
58
0.98
6472--6524
17
3.2
17
73
23
51
54
1
1
41
1.22
6472--6522
18
3.2
16
73
26
54
54
1
1
41
1.22
9313--9394
28
2.9
28
80
7
96
26
17
31
24
1.97
9372--9714
105
3.3
104
71
11
286
31
11
26
29
1.92
9377--9547
51
3.3
51
79
4
198
32
11
26
29
1.92
9588--9719
51
2.5
51
78
13
133
31
9
26
32
1.89
12066--12091
13
2.0
13
100
0
52
38
15
15
30
1.88
12045--12111
33
2.0
33
88
0
98
43
16
14
25
1.86
12131--12198
19
3.9
18
76
23
83
38
14
11
35
1.83
12153--12177
13
1.9
13
100
0
50
32
16
16
36
1.90
12134--12196
32
2.0
32
96
0
117
36
15
12
34
1.86
12254--12310
21
2.7
21
97
0
105
36
19
10
33
1.86
12317--12346
15
2.0
15
100
0
60
13
6
0
80
0.91
12939--13727
55
14.3
55
91
4
1154
20
20
29
28
1.98
13371--13460
26
3.3
26
67
19
76
20
17
33
28
1.95
14709--14765
1
57.0
1
76
0
51
0
5
7
87
0.66
14709--14765
13
4.7
12
81
12
62
0
5
7
87
0.66

Tables:   1

The End!