Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2336
Parameters: 2 7 7 80 10 50 1000
Length:  22148

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1654--1892
118
2.0
118
92
1
399
33
13
14
38
1.86
1987--2454
249
1.9
249
91
0
776
27
14
15
42
1.86
4600--4722
47
2.6
47
94
0
210
4
13
34
46
1.65
4872--4912
17
2.4
18
88
8
59
4
26
12
56
1.56
4869--5082
45
4.8
45
90
0
329
8
22
13
55
1.65
5225--5258
16
2.1
17
88
5
52
20
2
0
76
0.92
5832--5873
17
2.5
17
100
0
84
42
11
19
26
1.85
5971--6021
16
3.4
14
77
15
57
7
3
9
78
1.07
5975--6021
24
1.9
24
86
4
67
8
4
10
76
1.13
8218--9662
481
3.0
481
95
0
2550
37
16
10
34
1.83
10212--10246
2
17.5
2
93
0
61
48
0
0
51
1.00
16038--16098
28
2.2
28
100
0
122
37
9
18
34
1.83
21096--21155
29
2.0
30
84
12
79
61
0
0
38
0.96
21450--21479
12
2.4
13
88
11
53
46
0
0
53
1.00
21672--21802
53
2.4
55
81
9
137
56
2
5
35
1.35

Tables:   1

The End!