Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2337
Parameters: 2 7 7 80 10 50 1000
Length:  69618

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3225--3278
15
3.4
15
73
14
54
9
50
1
38
1.45
3241--3302
18
3.6
18
72
12
58
11
43
1
43
1.50
3226--3296
33
2.2
33
92
0
115
11
46
1
40
1.48
3254--3325
12
6.5
11
75
16
53
11
47
1
40
1.48
3256--3335
42
1.9
42
92
0
133
8
46
1
43
1.42
5752--5792
21
2.0
21
85
4
57
2
7
7
82
0.91
8679--9849
585
2.0
587
90
2
1829
38
21
15
24
1.92
12715--12821
54
2.0
54
94
0
187
31
15
21
30
1.95
15302--15377
12
6.9
11
75
15
52
39
2
48
9
1.49
15301--15386
24
3.8
24
72
17
85
41
2
45
10
1.51
15292--15410
42
2.8
42
92
0
193
42
2
46
8
1.47
24461--24579
42
2.8
42
92
0
193
8
46
2
42
1.47
24494--24569
12
6.9
11
75
15
52
9
48
2
39
1.49
24485--24570
24
3.8
24
72
17
85
10
45
2
41
1.51
24476--24546
18
3.6
18
69
20
52
9
43
2
43
1.52
28223--28257
12
2.9
12
84
16
54
40
0
48
11
1.39
36730--36790
9
6.1
9
75
17
50
13
40
0
45
1.43
36702--36811
42
2.6
42
92
0
175
11
43
0
43
1.47
39703--39778
12
6.9
11
75
15
52
39
2
48
9
1.49
39702--39787
24
3.8
24
72
17
85
41
2
45
10
1.51
39693--39811
42
2.8
42
92
0
193
42
2
46
8
1.47
45621--45667
18
2.6
18
83
6
51
10
46
0
42
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45652--45712
9
6.1
9
77
17
59
13
42
0
44
1.43
45624--45742
42
2.8
42
90
0
184
11
43
0
44
1.40
45639--45709
18
3.6
18
72
20
61
12
42
0
45
1.42
45657--45733
12
6.9
12
75
19
53
12
44
0
42
1.43
56097--56213
42
2.8
42
85
1
128
44
1
41
11
1.51
56140--56187
12
3.9
12
81
13
53
43
0
43
12
1.42
59408--59453
14
3.6
13
77
16
51
28
10
0
60
1.30
59395--59454
21
2.9
20
80
14
68
30
10
0
60
1.30
59397--59433
11
3.5
11
88
7
58
29
8
0
62
1.24
62498--62543
18
2.6
18
85
0
56
15
34
2
47
1.57
65443--65502
9
7.0
9
74
11
63
13
43
1
41
1.54
65448--65524
12
6.9
12
72
19
53
14
45
1
38
1.53
65448--65524
24
3.5
24
75
23
87
14
45
1
38
1.53
65425--65524
42
2.4
42
91
1
157
14
45
1
40
1.51

Tables:   1

The End!