Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2338
Parameters: 2 7 7 80 10 50 1000
Length:  33087

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2556--2686
67
1.9
67
85
10
178
37
13
6
41
1.72
7474--8013
109
5.0
106
78
9
462
32
14
16
36
1.89
7474--8013
216
2.5
217
80
5
547
32
14
16
36
1.89
8426--8452
2
13.5
2
100
0
54
51
0
0
48
1.00
8165--8442
148
1.9
148
90
3
452
51
12
3
32
1.57
10865--10949
1
85.0
1
80
0
89
0
3
7
89
0.58
10865--10949
22
3.9
22
86
7
111
0
3
7
89
0.58
10865--10951
32
2.7
32
89
7
124
0
5
6
87
0.67
21652--21724
27
2.7
27
82
4
85
38
1
12
47
1.50
26214--26282
27
2.6
27
85
0
84
27
7
17
47
1.73
26363--26407
13
3.5
13
81
6
56
15
42
6
35
1.73
26418--26483
33
2.0
33
100
0
132
30
15
27
27
1.96
27792--27846
27
2.0
28
86
10
78
45
0
1
52
1.11
27794--27851
13
4.3
13
77
12
55
44
0
3
51
1.18
28024--28080
22
2.6
21
81
13
62
56
0
3
40
1.17
28331--28377
22
2.1
23
84
11
62
31
4
2
61
1.27
29018--29078
32
1.9
32
86
6
88
45
0
3
50
1.17
31931--31971
16
2.5
17
80
11
50
41
9
0
48
1.36
32116--32380
122
2.2
123
85
8
346
40
3
3
53
1.32
32394--32443
24
2.1
23
85
10
66
34
0
2
64
1.05
32508--32558
16
2.9
17
77
8
50
35
0
0
64
0.94

Tables:   1

The End!