Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2345
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 147438
ACGTcount: A:0.31, C:0.19, G:0.17, T:0.33
Found at i:948 original size:158 final size:156
Alignment explanation
Indices: 743--3309 Score: 674
Period size: 158 Copynumber: 16.2 Consensus size: 156
733 CTTTTTAGGG
*
743 TTAGGCACCATAAACACAGTT-TTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
1 TTAGGCACCATAAACACA-TTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
* *
807 TACGCTTTTTTCCCACCTGTTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGAT
65 TAAGCTTTTTTCCCACCTGTTTTTGTAAAGTA-AAGTTCATTCCTTAAAAGAGACAAACATGGAT
* *
872 TCT-AGTAAGGATCTTCATTCATTTCGTGA
129 TCTCA-TAAGAATCCTCATTCATTTCG-GA
* * * * * *** *
901 TTTGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCATTTGCATGGA
1 TTAGGCACCATAAACACATTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCA-AGA
* ** * * ** * ** * * * ** *
966 -AATCTTTTCTTTGC-CTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
65 TAAGCTTTT-TTCCCACCTGTTTT-TGTAAAGT-AAAGTTCATTCCTTAAAAGAGACAAACATGG
* * ***
1029 ATTCTCATAA-AAGTCCCCAATC-TTGAAAAGA
127 ATTCTCATAAGAA-TCCTCATTCATT--TCGGA
* * * * * ** * * * ** ***
1060 TTGGGAACCAAAAACACATTC-CTTTCATTATTATA-AAGACATTAATGCTTTGGGGTCAAAAGA
1 TTAGGCACCATAAACACATTCTC-CTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
* * * *
1123 GAAGCTTTTCTTTCTACC-GTTATTGATAGAA-TCAAAGTT--TCTCTCTTAAATA-AGACAAGA
65 TAAGCTTTT-TTCCCACCTGTTTTTG-TA-AAGT-AAAGTTCAT-TC-CTTAAA-AGAGACAA-A
* * * ** * * *
1183 -AAGAATACTCATACTAATCCCCTTTCTTTTCAGGA
122 CATGGATTCTCATAAGAATCCTCATTCATTTC-GGA
* * * *
1218 TTAGGCACCATAAACATAGTT-TTCTCGTAAGGATAAATGATATTGATGCTTTGGTTTTGCAAGA
1 TTAGGCACCATAAACACA-TTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
* * * *
1282 TACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGAT
65 TAAGCTTTTTTCCCACCTGTTTTTGTAAAGTA-AAGTTCATTCCTTAAAAGAGACAAACATGGAT
* *
1347 TCT-AGTAAGGATCTTCATTCATTTCGGGA
129 TCTCA-TAAGAATCCTCATTCATTTC-GGA
* * * * ** *
1376 TTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGA
1 TTAGGCACCATAAACACATTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCA-AGA
* * * * ** * ** * * ** *
1441 -AATCTTTTCTTCGC-CTTATTTTCCATAAAATAAAAGTTTGTACTTTAAATA-AGACATGCATT
65 TAAGCTTTT-TTCCCACCTGTTTT-TGTAAAGT-AAAGTTCATTCCTTAAA-AGAGACAAACATG
* * **
1503 GATTCTCATAA-AAGTCCCCATTCTTTTAAAGA
126 GATTCTCATAAGAA-TCCTCATTCATTT-CGGA
* * * * * * * * * ** **
1535 ATGGGAACCAAAAACACATTC-CTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCACAAGA
1 TTAGGCACCATAAACACATTCTC-CTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
* * *
1598 TAAGCCTTTCTTT-CTA-CAGTTATTGGTAGAA-TCAAAGTT--TGTCTCTTAAATA-AGACAAA
65 TAAG-CTTT-TTTCCCACCTGTT-TTTGTA-AAGT-AAAGTTCAT-TC-CTTAAA-AGAGACAAA
* * ** ** * * * *
1657 CAAGAACACTCATACTAATCCTCTTTCTTTTTAGGG
122 CATGGATTCTCATAAGAATCCTCATTC-ATTTCGGA
* *
1693 TTAGGCACCATAAACATAGTT-TTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
1 TTAGGCACCATAAACACA-TTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
* * * *
1757 TACGCTTTCTTCCCACTTGTTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGAT
65 TAAGCTTTTTTCCCACCTGTTTTTGTAAAGTA-AAGTTCATTCCTTAAAAGAGACAAACATGGAT
* * *
1822 TCT-AGTAAGGATCTTTATTCATTTCGTGA
129 TCTCA-TAAGAATCCTCATTCATTTCG-GA
* * * ** * *
1851 TTTGGCACTATAATCACATTCTCCTCACCAGGATACATGATATTGATGGCTTT-CTTTTGCATGG
1 TTAGGCACCATAAACACATTCTCCTCATAAGGATACATGATATTGAT-GCTTTGGTTTTGCA-AG
* ** * * *** * ** * * * ** *
1915 A-AATCTTTTCTTTGC-CTTATTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
64 ATAAGCTTTT-TTCCCACCTGTTTTTGTAAAGT-AAAGTTCATTCCTTAAAAGAGACAAACATGG
* * ***
1978 ATTCTCATAA-AAGTCCCCAATC-TTGAAAAGA
127 ATTCTCATAAGAA-TCCTCATTCATT--TCGGA
* * * * * * ** * * * ** **
2009 TTGGGAACCAAAAACACGTTC-CTTTCATTATTATA-AAGACATTAATGCTTTGGGGTCACAAGA
1 TTAGGCACCATAAACACATTCTC-CTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
* * * * *
2072 GAAGCTTTTCTTTCTACC-GTTATTGATAGAA-TCAAAGTT--TGTCTTTTAAATA-AGACAAGA
65 TAAGCTTTT-TTCCCACCTGTTTTTG-TA-AAGT-AAAGTTCAT-TC-CTTAAA-AGAGACAA-A
* * * ** * * *
2132 -AAGAATACTCATACTAATCCCCTTTCTTTTCAGGA
122 CATGGATTCTCATAAGAATCCTCATTCATTTC-GGA
* * * *
2167 TTAGGCACCATAAACATAGTT-TTCTCGTAAGGATAAATGATATTGATGCTTTGGTTTTGCAAGA
1 TTAGGCACCATAAACACA-TTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
** * * *
2231 TGCGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGAT
65 TAAGCTTTTTTCCCACCTGTTTTTGTAAAGTA-AAGTTCATTCCTTAAAAGAGACAAACATGGAT
* *
2296 TCT-AGTAAGGATCTTCATTCATTTCGGGA
129 TCTCA-TAAGAATCCTCATTCATTTC-GGA
* * * * ** *
2325 TTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGA
1 TTAGGCACCATAAACACATTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCA-AGA
* * * * ** * ** * * ** *
2390 -AATCTTTTCTTCGC-CTTATTTTCCATAAAATAAAAGTTTGTACATTAAATA-AGACATGCATT
65 TAAGCTTTT-TTCCCACCTGTTTT-TGTAAAGT-AAAGTTCATTCCTTAAA-AGAGACAAACATG
* * **
2452 GATTCTCATAA-AAGTCCCCATTCTTTTAAAGA
126 GATTCTCATAAGAA-TCCTCATTCATTT-CGGA
* * * * * * * * ** **
2484 AT-GAGAACCAAAAACACATTC-CTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCACAAG
1 TTAG-GCACCATAAACACATTCTC-CTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAG
* *
2546 ATAAGCCTTTCTTT-CTACC-GTTATTGGTAGAA-TCAAAGTT--TGTCTCTTAAATA-AGACAA
64 ATAAG-CTTT-TTTCCCACCTGTT-TTTGTA-AAGT-AAAGTTCAT-TC-CTTAAA-AGAGACAA
* * ** ** * * * *
2605 ACAAGAACACTCATACTAATCCTCTTTCTTTTTAGGG
121 ACATGGATTCTCATAAGAATCCTCATTC-ATTTCGGA
* *
2642 TTAGGCACCATAAACATAGTT-TTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
1 TTAGGCACCATAAACACA-TTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
* * * *
2706 TACGCTTTCTTCCCACTTGTTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGAT
65 TAAGCTTTTTTCCCACCTGTTTTTGTAAAGTA-AAGTTCATTCCTTAAAAGAGACAAACATGGAT
* * *
2771 TCT-AGTAAGGATCTTTATTCATTTCGTGA
129 TCTCA-TAAGAATCCTCATTCATTTCG-GA
* ** * ** * *
2800 TTTGGCATTATAATCACATTCTCCTCACCAGGATACATGATATTGATGGCTTT-CTTTTGCATGG
1 TTAGGCACCATAAACACATTCTCCTCATAAGGATACATGATATTGAT-GCTTTGGTTTTGCA-AG
* ** * * ** * ** * * * ** *
2864 A-AATCTTTTCTTTGC-CTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
64 ATAAGCTTTT-TTCCCACCTGTTTT-TGTAAAGT-AAAGTTCATTCCTTAAAAGAGACAAACATG
* * ***
2927 GATTCTCATAA-AAGTCCCCAATC-TTGAAAAGA
126 GATTCTCATAAGAA-TCCTCATTCATT--TCGGA
* * * * * * ** * * * ** **
2959 TTGGGAACCAAAAACACGTTC-CTTTCATTATTATA-AAGACATTAATGCTTTGGGGTCACAAGA
1 TTAGGCACCATAAACACATTCTC-CTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
* * * * *
3022 GAAGCTTTTCTTTCTACC-GTTATTGATAGAA-TCAAAGTT--TGTCTCTTAAATA-AGACAAGC
65 TAAGCTTTT-TTCCCACCTGTTTTTG-TA-AAGT-AAAGTTCAT-TC-CTTAAA-AGAGACAAAC
* * * ** * * *
3082 AAGAATACTCATACTAATCCCCTTTCTTTTCAGGA
123 ATGGATTCTCATAAGAATCCTCATTCATTTC-GGA
* *
3117 TTAGGCACCATAAACATAGTT-TTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
1 TTAGGCACCATAAACACA-TTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
* * * *
3181 TACGCTTTCTTCCCACCTGTTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGAT
65 TAAGCTTTTTTCCCACCTGTTTTTGTAAAGTA-AAGTTCATTCCTTAAAAGAGACAAACATGGAT
* *
3246 TCT-AGTAAGGATCTTCATTCATTTCGTGA
129 TCTCA-TAAGAATCCTCATTCATTTCG-GA
** * * *
3275 TTAGGCACTGTAAACATATTCCCCTAATAAGGATA
1 TTAGGCACCATAAACACATTCTCCTCATAAGGATA
3310 TTGATGGTTT
Statistics
Matches: 1673, Mismatches: 571, Indels: 330
0.65 0.22 0.13
Matches are distributed among these distances:
156 12 0.01
157 97 0.06
158 1018 0.61
159 529 0.32
160 17 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (156 bp):
TTAGGCACCATAAACACATTCTCCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAT
AAGCTTTTTTCCCACCTGTTTTTGTAAAGTAAAGTTCATTCCTTAAAAGAGACAAACATGGATTC
TCATAAGAATCCTCATTCATTTCGGA
Found at i:1197 original size:475 final size:475
Alignment explanation
Indices: 2--3809 Score: 5837
Period size: 475 Copynumber: 8.1 Consensus size: 475
1 A
* *
2 GATGGTTTTCTTTTGCATGGAAATC-TTTCTTTGCCTTACTTTCCATAAAATGAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATAAAAGTTTGTACT
* * *
66 TTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCAATCTTTCAAAGATTGGGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTTTAAAGAATGGGAACCAAAAAC
* * * * *
131 ACATTCCTGTCATTAGGATACAAGACATTAGTGCTTTGGGGTCGCAAGATAAGCTTTTCTTTCTA
131 ACATTCCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCACAAGAGAAGCCTTTCTTTCTA
* * * *
196 CTGTTATTGATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCC
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCC
** * * * * *
261 CAATCTTTTCAGGATTAGGCAGCATAAACATAGTCTTCTCATAAGGATACATGACAGTGACGCTT
260 CTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTT
* * * * * * * * * * *
326 TGGTTTTGCAATAAACACTTTCTTCCCACCAATTTTTCTAAATTCTAAGTTCCTACCTTAAATGA
325 TGGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGA
* * *
391 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTGTAAACATATTC-C
390 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTC
*
455 C-C-TC---AT-CAGGATATT
455 CTCATCAGGATACATGATATT
*
470 GATGGTTTTCTTTTGCATGGAAATC-TTTCTTTGCCTTACTTTCCATAAAATAAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATAAAAGTTTGTACT
* * * *
534 TTAAATGAGACATGCATTGATTCTCATAAGAGTCCCCATTCTTTTCAAGAATGGGAGCCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTTTAAAGAATGGGAACCAAAAAC
* *
599 ACATTCCTTTCTTTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTA
131 ACATTCCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCACAAGAGAAGCCTTTCTTTCTA
* * *
664 CCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAACACTCATACTAATCCT
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCC
* * * *
729 CTTACTTTTTAGGGTTAGGCACCATAAACACAGTTTTCTCATAAGGATACATGATATTGATGCTT
260 CTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTT
* *
794 TGGTTTTGCAAGATACGCTTTTTTCCCACCTGTTTTTGTAAAGTATAAGTTCATTCCTCAAAAGA
325 TGGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGA
*
859 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTTGGCACTATAATCACATTCTC
390 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTC
924 CTCATCAGGATACATGATATT
455 CTCATCAGGATACATGATATT
* *
945 GATGGTTTTCATTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATAAAAGTTTGTACT
** *
1010 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTTTAAAGAATGGGAACCAAAAAC
** * *
1075 ACATTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCAAAAGAGAAGCTTTTCTTTCTAC
131 ACATTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCCTTTCTTTCTAC
*
1140 CGTTATTGATAGAATCAAAGTTTCTCTCTTAAATAAGACAAGA-AAGAATACTCATACTAATCCC
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAA-ACAAGAATACTCATACTAATCCC
* *
1204 CTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCGTAAGGATAAATGATATTGATGCTT
260 CTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTT
1269 TGGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGA
325 TGGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGA
*
1334 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAATCACATTCTC
390 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTC
1399 CTCATCAGGATACATGATATT
455 CTCATCAGGATACATGATATT
*
1420 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTCGCCTTATTTTCCATAAAATAAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATAAAAGTTTGTACT
* *
1485 TTAAATAAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTAAAGAATGGGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTTTAAAGAATGGGAACCAAAAAC
*
1550 ACATTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCACAAGATAAGCCTTTCTTTCTAC
131 ACATTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCCTTTCTTTCTAC
* * * *
1615 AGTTATTGGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAACACTCATACTAATCCTC
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCC
* *
1680 TTTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTT
261 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTT
* *
1745 GGTTTTGCAAGATACGCTTTCTTCCCACTTGTTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
326 GGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
* *
1810 ACAAACATGGATTCTAGTAAGGATCTTTATTCATTTCGTGATTTGGCACTATAATCACATTCTCC
391 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCC
*
1875 TCACCAGGATACATGATATT
456 TCATCAGGATACATGATATT
* *
1895 GATGGCTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTA-TTTCCATAAAATCAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATAAAAGTTTGTACT
** *
1959 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTTTAAAGAATGGGAACCAAAAAC
* ** *
2024 ACGTTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTAC
131 ACATTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCCTTTCTTTCTAC
*
2089 CGTTATTGATAGAATCAAAGTTTGTCTTTTAAATAAGACAAGA-AAGAATACTCATACTAATCCC
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAA-ACAAGAATACTCATACTAATCCC
* *
2153 CTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCGTAAGGATAAATGATATTGATGCTT
260 CTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTT
*
2218 TGGTTTTGCAAGATGCGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGA
325 TGGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGA
*
2283 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAATCACATTCTC
390 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTC
2348 CTCATCAGGATACATGATATT
455 CTCATCAGGATACATGATATT
* *
2369 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTCGCCTTATTTTCCATAAAATAAAAGTTTGTACA
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATAAAAGTTTGTACT
* * *
2434 TTAAATAAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTAAAGAATGAGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTTTAAAGAATGGGAACCAAAAAC
*
2499 ACATTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCACAAGATAAGCCTTTCTTTCTAC
131 ACATTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCCTTTCTTTCTAC
* * *
2564 CGTTATTGGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAACACTCATACTAATCCTC
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCC
* *
2629 TTTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTT
261 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTT
* *
2694 GGTTTTGCAAGATACGCTTTCTTCCCACTTGTTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
326 GGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
* * *
2759 ACAAACATGGATTCTAGTAAGGATCTTTATTCATTTCGTGATTTGGCATTATAATCACATTCTCC
391 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCC
*
2824 TCACCAGGATACATGATATT
456 TCATCAGGATACATGATATT
* *
2844 GATGGCTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATAAAAGTTTGTACT
** *
2909 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTTTAAAGAATGGGAACCAAAAAC
* ** *
2974 ACGTTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTAC
131 ACATTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCCTTTCTTTCTAC
*
3039 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAGCAAGAATACTCATACTAATCCCC
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCC
3104 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTT
261 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTT
* *
3169 GGTTTTGCAAGATACGCTTTCTTCCCACCTGTTTTTGTAAAGTATAAGTTCATTCCTCAAATGAG
326 GGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
* * *
3234 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTGTAAACATATTC-CC
391 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCC
*
3298 -C-T-A--ATA-AGGATATT
456 TCATCAGGATACATGATATT
* * * *
3312 GATGGTTTTCTTTTGCATGGAAATC-ATTCTTTGCCTTACTTTCCATAAAATGAAAGTTTCTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATAAAAGTTTGTACT
* ** * * * * *
3376 TTGAATGAGACATGCATTGATTCTTGTAAGAGCCCCCATTCTTTTCAAGAATGGGAGCCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTTTAAAGAATGGGAACCAAAAAC
* *
3441 ACATTCCTTTCTTTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTA
131 ACATTCCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCACAAGAGAAGCCTTTCTTTCTA
* * * * *
3506 CTGTTATTGATAGAATCAAACTTTGTCACTTAAAGAAGGCAAACAAGAATACTCATACTAATCCC
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCC
* * * * *
3571 CATTCTTTTCAGGATTAGGCAGCGA-AAACATAGTCTTCTCATAAGGATACATGATAGTGACGCT
260 CTTTCTTTTCAGGATTAGGCA-CCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCT
* * * * * * * * * * *
3635 TTGGTTTCGCAATA-AGCACTTTCTTCCCACCAATTTTTCTCAATTCTAAGTTCCTACCTCAAAT
324 TTGGTTTTGCAAGATA-CGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAA
* * * *
3699 GAGACAAACATAGG-TTTTTGTAAGGATCTTCATTCTTTTCGTGATTAGGCACTATAAACACATT
388 GAGACAAACAT-GGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATT
* *
3763 CTCCTCATTAGGATAAATGATATT
452 CTCCTCATCAGGATACATGATATT
* *
3787 TATGGTTTTC-TTTGTATGGAAAT
1 GATGGTTTTCTTTTGCATGGAAAT
3810 TGAAAGCTTA
Statistics
Matches: 3066, Mismatches: 250, Indels: 42
0.91 0.07 0.01
Matches are distributed among these distances:
467 106 0.03
468 700 0.23
469 11 0.00
470 2 0.00
471 4 0.00
472 1 0.00
473 1 0.00
474 464 0.15
475 1664 0.54
476 113 0.04
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.35
Consensus pattern (475 bp):
GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATAAAAGTTTGTACT
TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTTTAAAGAATGGGAACCAAAAAC
ACATTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCCTTTCTTTCTAC
CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCC
TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTT
GGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCC
TCATCAGGATACATGATATT
Found at i:2314 original size:949 final size:945
Alignment explanation
Indices: 2--3809 Score: 6157
Period size: 949 Copynumber: 4.0 Consensus size: 945
1 A
* *
2 GATGGTTTTCTTTTGCATGGAAATC-TTTCTTTGCCTTACTTTCCATAAAATGAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACT
* **
66 TTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCAATCTTTCAAAGATTGGGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
* ** * * *
131 ACATTCCTGTCATTAGGATACAAGACATTAGTGCTTTGGGGTCGCAAGATAAGCTTTTCTTTCTA
131 ACATTCCTTTCATTATTATA-AAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTA
* * * *
196 CTGTTATTGATAGAATCAAAGTTTGTCACTTAAATAAGGCAA-ACATGAATACTCATACTAATCC
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAGA-AAGAATACTCATACTAATCC
** * * * * * *
260 CCAATCTTTTCAGGATTAGGCAGCATAAACATAGTCTTCTCATAAGGATACATGACAGTGACGCT
259 CCTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATAAATGATATTGATGCT
* * * * * * * * * * *
325 TTGGTTTTGCAATAAACACTTTCTTCCCACCAATTTTTCTAAATTCTAAGTTCCTACCTTAAATG
324 TTGGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAG
* * *
390 AGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTGTAAACATATTCC
389 AGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTCC
*
455 CCTC-AT-CAGGATATTGATGGTTTTCTTTTGCATGGAAATCTTTCTTTGCCTTACTTTCCATAA
454 CCTCAATACAGGATATTGATGGTTTTCTTTTGCATGGAAATCTTTCTTCGCCTTACTTTCCATAA
* * *
518 AATAAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAGAGTCCCCATTCTTTTCAAG
519 AATAAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTAAAG
* * *
583 AATGGGAGCCAAAAACACATTCCTTTCTTTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGA
584 AATGGGAACCAAAAACACATTCCTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCACAAGA
*
648 GAAGCCTTTCTTTCTACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAA
649 GAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAA
* *
713 CACTCATACTAATCCTCTTACTTTTTAGGGTTAGGCACCATAAACACAGTTTTCTCATAAGGATA
714 CACTCATACTAATCCTCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAGGATA
*
778 CATGATATTGATGCTTTGGTTTTGCAAGATACGCTTTTTTCCCACCTGTTTTTGTAAAGTATAAG
779 CATGATATTGATGCTTTGGTTTTGCAAGATACGCTTTCTTCCCACCTGTTTTTGTAAAGTATAAG
843 TTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTTGGCA
844 TTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTTGGCA
*
908 CTATAATCACATTCTCCTCATCAGGATACATGATATT
909 CTATAATCACATTCTCCTCACCAGGATACATGATATT
*
945 GATGGTTTTCATTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACT
1010 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
*
1075 ACATTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCAAAAGAGAAGCTTTTCTTTCTAC
131 ACATTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTAC
*
1140 CGTTATTGATAGAATCAAAGTTTCTCTCTTAAATAAGACAAGAAAGAATACTCATACTAATCCCC
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAGAAAGAATACTCATACTAATCCCC
*
1205 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCGTAAGGATAAATGATATTGATGCTTT
261 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATAAATGATATTGATGCTTT
1270 GGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
326 GGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
*
1335 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAATCACATTCTCC
391 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTC-CC
* *
1400 TCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTCGCCTTATTTTCC
455 -C-TCA--ATACAGGATATTGATGGTTTTCTTTTGCATGGAAATC-TTTCTTCGCCTTACTTTCC
1465 ATAAAATAAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTT
515 ATAAAATAAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTT
1530 AAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCAC
580 AAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCAC
* * *
1594 AAGATAAGCCTTTCTTTCTACAGTTATTGGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
645 AAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
1659 AGAACACTCATACTAATCCTCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAG
710 AGAACACTCATACTAATCCTCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAG
*
1724 GATACATGATATTGATGCTTTGGTTTTGCAAGATACGCTTTCTTCCCACTTGTTTTTGTAAAGTA
775 GATACATGATATTGATGCTTTGGTTTTGCAAGATACGCTTTCTTCCCACCTGTTTTTGTAAAGTA
*
1789 TAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTTATTCATTTCGTGATTT
840 TAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTT
1854 GGCACTATAATCACATTCTCCTCACCAGGATACATGATATT
905 GGCACTATAATCACATTCTCCTCACCAGGATACATGATATT
*
1895 GATGGCTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTA-TTTCCATAAAATCAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACT
1959 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
*
2024 ACGTTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTAC
131 ACATTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTAC
*
2089 CGTTATTGATAGAATCAAAGTTTGTCTTTTAAATAAGACAAGAAAGAATACTCATACTAATCCCC
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAGAAAGAATACTCATACTAATCCCC
*
2154 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCGTAAGGATAAATGATATTGATGCTTT
261 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATAAATGATATTGATGCTTT
*
2219 GGTTTTGCAAGATGCGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
326 GGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
*
2284 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAATCACATTCTCC
391 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTC-CC
* *
2349 TCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTCGCCTTATTTTCC
455 -C-TCA--ATACAGGATATTGATGGTTTTCTTTTGCATGGAAATC-TTTCTTCGCCTTACTTTCC
*
2414 ATAAAATAAAAGTTTGTACATTAAATAAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTT
515 ATAAAATAAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTT
*
2479 AAAGAATGAGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCAC
580 AAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCAC
* *
2543 AAGATAAGCCTTTCTTTCTACCGTTATTGGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
645 AAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
2608 AGAACACTCATACTAATCCTCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAG
710 AGAACACTCATACTAATCCTCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAG
*
2673 GATACATGATATTGATGCTTTGGTTTTGCAAGATACGCTTTCTTCCCACTTGTTTTTGTAAAGTA
775 GATACATGATATTGATGCTTTGGTTTTGCAAGATACGCTTTCTTCCCACCTGTTTTTGTAAAGTA
*
2738 TAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTTATTCATTTCGTGATTT
840 TAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTT
*
2803 GGCATTATAATCACATTCTCCTCACCAGGATACATGATATT
905 GGCACTATAATCACATTCTCCTCACCAGGATACATGATATT
*
2844 GATGGCTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACT
1 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACT
2909 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
66 TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
*
2974 ACGTTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTAC
131 ACATTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTAC
*
3039 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAGCAAGAATACTCATACTAATCCCC
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAGAAAGAATACTCATACTAATCCCC
*
3104 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTT
261 TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATAAATGATATTGATGCTTT
* *
3169 GGTTTTGCAAGATACGCTTTCTTCCCACCTGTTTTTGTAAAGTATAAGTTCATTCCTCAAATGAG
326 GGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
* * *
3234 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCC
391 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTCCCC
* *
3299 T-AATA-AGGATATTGATGGTTTTCTTTTGCATGGAAATCATTCTTTGCCTTACTTTCCATAAAA
456 TCAATACAGGATATTGATGGTTTTCTTTTGCATGGAAATCTTTCTTCGCCTTACTTTCCATAAAA
* * * * ** * * *
3362 TGAAAGTTTCTACTTTGAATGAGACATGCATTGATTCTTGTAAGAGCCCCCATTCTTTTCAAGAA
521 TAAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTAAAGAA
* * *
3427 TGGGAGCCAAAAACACATTCCTTTCTTTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGA
586 TGGGAACCAAAAACACATTCCTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCACAAGAGA
* * * * * *
3492 AGCCTTTCTTTCTACTGTTATTGATAGAATCAAACTTTGTCACTTAAAGAAGGCAAACAAGAATA
651 AGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAACA
* * * * * *
3557 CTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCGA-AAACATAGTCTTCTCATAAGGATAC
716 CTCATACTAATCCTCTTTCTTTTTAGGGTTAGGCA-CCATAAACATAGTTTTCTCATAAGGATAC
* * * * * ** * * * *
3621 ATGATAGTGACGCTTTGGTTTCGCAATA-AGCACTTTCTTCCCACCAATTTTTCTCAATTCTAAG
780 ATGATATTGATGCTTTGGTTTTGCAAGATA-CGCTTTCTTCCCACCTGTTTTTGTAAAGTATAAG
* * * * * * *
3685 TTCCTACCTCAAATGAGACAAACATAGG-TTTTTGTAAGGATCTTCATTCTTTTCGTGATTAGGC
844 TTCATTCCTCAAAAGAGACAAACAT-GGATTCTAGTAAGGATCTTCATTCATTTCGTGATTTGGC
* ** *
3749 ACTATAAACACATTCTCCTCATTAGGATAAATGATATT
908 ACTATAATCACATTCTCCTCACCAGGATACATGATATT
* *
3787 TATGGTTTTC-TTTGTATGGAAAT
1 GATGGTTTTCTTTTGCATGGAAAT
3810 TGAAAGCTTA
Statistics
Matches: 2707, Mismatches: 143, Indels: 31
0.94 0.05 0.01
Matches are distributed among these distances:
942 121 0.04
943 608 0.22
944 126 0.05
945 1 0.00
946 3 0.00
947 1 0.00
948 1 0.00
949 944 0.35
950 785 0.29
951 117 0.04
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.35
Consensus pattern (945 bp):
GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACT
TTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAAAAGATTGGGAACCAAAAAC
ACATTCCTTTCATTATTATAAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTAC
CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAGAAAGAATACTCATACTAATCCCC
TTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATAAATGATATTGATGCTTT
GGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAG
ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTCCCC
TCAATACAGGATATTGATGGTTTTCTTTTGCATGGAAATCTTTCTTCGCCTTACTTTCCATAAAA
TAAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTAAAGAA
TGGGAACCAAAAACACATTCCTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCACAAGAGA
AGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAACA
CTCATACTAATCCTCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAGGATACA
TGATATTGATGCTTTGGTTTTGCAAGATACGCTTTCTTCCCACCTGTTTTTGTAAAGTATAAGTT
CATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTTGGCACT
ATAATCACATTCTCCTCACCAGGATACATGATATT
Found at i:4575 original size:13 final size:13
Alignment explanation
Indices: 4557--4582 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
4547 CAATTTTTTG
4557 TGTATCGATACAT
1 TGTATCGATACAT
4570 TGTATCGATACAT
1 TGTATCGATACAT
4583 ACTTGCTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:6981 original size:21 final size:21
Alignment explanation
Indices: 6957--7002 Score: 53
Period size: 22 Copynumber: 2.2 Consensus size: 21
6947 TTTGATGCTG
6957 ATTTTG-A-TGAAAAACGAAGT
1 ATTTTGAAGTGAAAAAC-AAGT
6977 -TATTTGAAGTGAAAAACAAGT
1 AT-TTTGAAGTGAAAAACAAGT
6998 ATTTT
1 ATTTT
7003 TGCAAAAGAT
Statistics
Matches: 22, Mismatches: 0, Indels: 7
0.76 0.00 0.24
Matches are distributed among these distances:
19 1 0.05
20 4 0.18
21 8 0.36
22 9 0.41
ACGTcount: A:0.43, C:0.04, G:0.17, T:0.35
Consensus pattern (21 bp):
ATTTTGAAGTGAAAAACAAGT
Found at i:7143 original size:13 final size:13
Alignment explanation
Indices: 7125--7163 Score: 69
Period size: 13 Copynumber: 3.0 Consensus size: 13
7115 ATAATCACCC
*
7125 TGTATCGATACAG
1 TGTATCGATACAA
7138 TGTATCGATACAA
1 TGTATCGATACAA
7151 TGTATCGATACAA
1 TGTATCGATACAA
7164 AGAAAAATGT
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
13 25 1.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:7174 original size:20 final size:20
Alignment explanation
Indices: 7149--7227 Score: 77
Period size: 20 Copynumber: 3.7 Consensus size: 20
7139 GTATCGATAC
7149 AATGTATCGATACAAAGAAA
1 AATGTATCGATACAAAGAAA
*
7169 AATGTATCGATACATAGAATTTCCA
1 AATGTATCGATACAAAGAA-----A
* *
7194 GATGTATCGATACACAGAAA
1 AATGTATCGATACAAAGAAA
*
7214 CATGTATCGATACA
1 AATGTATCGATACA
7228 TTTTGGACAT
Statistics
Matches: 50, Mismatches: 4, Indels: 10
0.78 0.06 0.16
Matches are distributed among these distances:
20 32 0.64
25 18 0.36
ACGTcount: A:0.44, C:0.15, G:0.15, T:0.25
Consensus pattern (20 bp):
AATGTATCGATACAAAGAAA
Found at i:11105 original size:21 final size:21
Alignment explanation
Indices: 11076--11120 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 21
11066 AAGTTTTCAT
*
11076 TTTTCTTAGCTAAC-TCATTA
1 TTTTCTTAGCCAACTTCATTA
*
11096 TTTTCATTAGCCAACTTCTTTA
1 TTTTC-TTAGCCAACTTCATTA
11118 TTT
1 TTT
11121 CAACTTGCAA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
20 5 0.24
21 8 0.38
22 8 0.38
ACGTcount: A:0.22, C:0.20, G:0.04, T:0.53
Consensus pattern (21 bp):
TTTTCTTAGCCAACTTCATTA
Found at i:13352 original size:13 final size:13
Alignment explanation
Indices: 13334--13359 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
13324 CAATTTTTTG
13334 TGTATCGATACAT
1 TGTATCGATACAT
13347 TGTATCGATACAT
1 TGTATCGATACAT
13360 ACTTGCTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:14899 original size:475 final size:476
Alignment explanation
Indices: 13742--15870 Score: 3168
Period size: 475 Copynumber: 4.5 Consensus size: 476
13732 GATCCTAACA
*
13742 GAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
1 GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* * * ** * * *
13807 ATTCTCGTAAAACTCCCTAATCTTTGAAAGATTGGGAACCAAAAACGCATTCCTGTCATTAGGAT
66 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
* * *
13872 ACAAGACATTAGTGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACTGTTATTGATAGAATCAA
131 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAA
*
13937 ACTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAAT-CCCTAATCTTTTCAGGATTAG
196 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCCT-ATCTTTTCAGGATTAG
* * * * * * * *
14001 GCAGCATAAACGTAGCCTTCTCCTAAGGAAACATGACAGTGATGCTTTGGTTTCGCAATAAACGC
260 GCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGC
* *
14066 TTTCTTCCCACCAATTTTTCTAAATTCA-AAGTTCCCACCTCAAATGAGACAAACATGGATTCTA
325 TTTCTTCCCACCAATTTTTCTAAAGT-ATAAGTTCCTACCTCAAATGAGACAAACATGGATTCTA
* *
14130 GTAAGAATCTTCATT-ATTTTCGTGATTAGGCACTATAATCACA-TCTCCTCATCAGGATACATT
389 GTAAGGATCTTCATTCA-TTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATG
*
14193 ATATTGATGGTTTTCTTTTGCCTG
453 ATATTGATGGTTTTCTTTTGCATG
14217 GAAATC-TTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTG-----TAAATGAGACATGCATTG
1 GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* **
14276 ATTCTCGTAAAAGTCCCCATTCCTTTCTGGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
66 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
*
14341 A-AAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGTATCAA
131 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAA
* * * *
14405 TGTTTGTCACTTAAATAAGGCAAACATCAATGCTCATACTAATCCCCTTTCTTTTCAGGATTAGG
196 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCCTATCTTTTCAGGATTAGG
* *
14470 CACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCT
261 CACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCT
* * * * *
14535 TTCTTCCCGCCTATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
326 TTCTTCCCACCAATTTTTCTAAAGTATAAGTTCCTACCTCAAATGAGACAAACATGGATTCTAGT
*
14600 AAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATGCATGATA
391 AAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATA
*
14665 TTGATGGTTTTCTTTTGCATT
456 TTGATGGTTTTCTTTTGCATG
* *
14686 GAAATCTTTTCTTCGCCTTATTTTCCATAAAATCAAAGTTTATACTTTAAATGAGACATGCATTG
1 GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
*
14751 ATTCTCGTAAAAGTCCCCATTCTTTTCAGGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
66 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
* *
14816 -GAAGACATTAATGCTTTGGGGTCTCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAA
131 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAA
* * * * *
14880 AGTTTGTCACTTAAATAAGGCAAAGATGAATACTCATACTAATCTCCAATCTTTTTAGGTTTAGG
196 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCCTATCTTTTCAGGATTAGG
* * * * *
14945 CAGCACAAACATAGTCTTCTCATAAGGATACATGATATTGACGCTTTGGTTTCGCAATAAACACT
261 CACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCT
* * * * *
15010 TTCTTCCCACCAATTTTTCTAAATTCTAAGTTCCTACCTCAAATGAGGCAAACATGGATTTTTGT
326 TTCTTCCCACCAATTTTTCTAAAGTATAAGTTCCTACCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * *
15075 AAAGATCTTCATTCATTTCATGATTAGGCACAATAAACACATTCTTCTCATTAGGATAAATGATA
391 AAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATA
* * * *
15140 TTTATCGTTTTCTTTTGTACG
456 TTGATGGTTTTCTTTTGCATG
* * * * *
15161 AAAATCTTTTCTTCGCTTTTTTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
1 GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* * * * *** *
15226 ATTCTCATGAAAGTCCCTAATCTTGAAAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGAT
66 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
*
15291 ACAAGACATTAACGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAA
131 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAA
* * ** * *
15356 AGTTTGTCTCTTAAATAAGACAGGCAAGAATACTCATACTAATCCCCTTTCTTTTCAGGATTAGG
196 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCCTATCTTTTCAGGATTAGG
* *
15421 CACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCT
261 CACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCT
* * *
15486 TTCTTCCCACCTATTTTTGTAAAGTATAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGT
326 TTCTTCCCACCAATTTTTCTAAAGTATAAGTTCCTACCTCAAATGAGACAAACATGGATTCTAGT
* * *
15551 AAGGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCCCCTCATCAGGATACATGATA
391 AAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATA
*
15616 TTGATGGTTTTCTTTTGCGTG
456 TTGATGGTTTTCTTTTGCATG
* **
15637 GAAATC-TTTCTTTGCCTTACTTTCCATAAAATCATTGTTTGTACTTTAAATGAGACATGCATTG
1 GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
15701 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
66 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
* *
15766 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAGGCCTTTCTTTCTACTGTTATTGATAGAATCAA
131 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAA
15831 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACT
196 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACT
15871 GATGACAACC
Statistics
Matches: 1473, Mismatches: 169, Indels: 24
0.88 0.10 0.01
Matches are distributed among these distances:
467 1 0.00
468 263 0.18
469 124 0.08
470 33 0.02
474 34 0.02
475 711 0.48
476 307 0.21
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (476 bp):
GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAA
AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCCTATCTTTTCAGGATTAGG
CACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCT
TTCTTCCCACCAATTTTTCTAAAGTATAAGTTCCTACCTCAAATGAGACAAACATGGATTCTAGT
AAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATA
TTGATGGTTTTCTTTTGCATG
Found at i:15479 original size:159 final size:158
Alignment explanation
Indices: 13772--15868 Score: 666
Period size: 158 Copynumber: 13.3 Consensus size: 158
13762 TTTTCCTTAA
* * * * * **
13772 AATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTAAAACTCCCTAATCTTTGAA
1 AATCAAAGTTTGT-CTCTTAAATGAGACAAGCA-TGAATTCTCATATAA-TCCCCATTCTTTTCA
* * * * * * * * * * **
13835 AGATTGGGAACCAAAAACGCATTCCTGTCATTAGGATACAAGACATT-AGTGCTTTGGGGTCGCA
63 GGATTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGA-TGCTTTGGTTTCGCA
* *
13899 AGAGAAGCTTTTCTTTCTACTGTTATTGATAG
127 AGAGAAGCCTTTCTTTCTACCGTTATTGATAG
* * * * * * * *
13931 AATCAAACTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCTAATCTTTTCAGG
1 AATCAAAGTTTGTCTCTTAAATGAGACAAGCATGAATTCTCATA-TAATCCCCATTCTTTTCAGG
* ** ** * * * * *
13996 ATTAGGCAGCATAAACGTAGCCTTCTCCTAAGGAAACATGACAGTGATGCTTTGGTTTCGCAATA
65 ATTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * **
14061 -AA-CGCTTTCTTCCCACCAATT-TTTCTA-
130 GAAGC-CTTTCTTTCTACC-GTTATTGATAG
** * * * * * ** *
14088 AATTCAAAG-TTCCCACCTCAAATGAGACAAACATGGATTCT-AGTAAGAATCTTCATTATTTTC
1 AA-TCAAAGTTTGTC-TCTTAAATGAGACAAGCATGAATTCTCA-T-ATAATCCCCATTCTTTTC
* * * * * * ** *
14151 -GTGATTAGGCACTATAATCACA-TCTCCTCATCAGGATACATTATATTGATGGTTTTCTTTTGC
62 AG-GATTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGC
** ** * * *
14214 CTG-GAAATCTTTC-TT-TGCC-TTATTTTCCATAA
126 AAGAGAAGCCTTTCTTTCTACCGTTA--TT-GATAG
* * * * *
14246 AATCAAAGTTTG-----TAAATGAGACATGCATTG-ATTCTCGTAAAAGTCCCCATTCCTTTCTG
1 AATCAAAGTTTGTCTCTTAAATGAGACAAGCA-TGAATTCTCATATAA-TCCCCATTCTTTTCAG
* * * * * * * * **
14305 GAATGGGAACCAAAAACACATTCCTT-TCATTAGGATA-AAGACATTAATGCTTTGGGGTCGCAA
64 GATTAGGCACCATAAACACATT-CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
14368 GAGAAGCCTTTCTTTCTACCGTTATTGATAG
128 GAGAAGCCTTTCTTTCTACCGTTATTGATAG
* * * * * * * * *
14399 TATCAATGTTTGTCACTTAAATAAGGCAAACATCAATGCTCATACTAATCCCCTTTCTTTTCAGG
1 AATCAAAGTTTGTCTCTTAAATGAGACAAGCATGAATTCTCATA-TAATCCCCATTCTTTTCAGG
*
14464 ATTAGGCACCATAAACATAGTT-TTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
65 ATTAGGCACCATAAACACA-TTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * ** * *
14528 ATACG-CTTTCTTCCCGCCTATTTTTG-TA-
129 AGAAGCCTTTCTTTCTACC-GTTATTGATAG
* * * ** *
14556 AAGT-ATAAGTTCAT-TC-CTCAAATGAGACAAACATGGATTCT-AGTA-AGGATCTTCATTCAT
1 AA-TCA-AAGTT--TGTCTCTTAAATGAGACAAGCATGAATTCTCA-TATA--ATCCCCATTCTT
* * * * * * **
14616 TTC-GTGATTAGGCACTATAATCACATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTTT
59 TTCAG-GATTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
* * * * * * *
14680 TGCATTGA-AATCTTTTC-TTC-GCC-TTATTTTCCATAA
123 CGCA-AGAGAAGCCTTTCTTTCTACCGTTA--TT-GATAG
* * * *
14716 AATCAAAGTTTATACT-TTAAATGAGACATGCATTG-ATTCTCGTAAAAGTCCCCATTCTTTTCA
1 AATCAAAGTTTGT-CTCTTAAATGAGACAAGCA-TGAATTCTCATATAA-TCCCCATTCTTTTCA
* * * * * * * ** *
14779 GGAATGGGAACCAAAAACACATTCCTT-TCATTAGGATGA-A-GACATTAATGCTTTGGGGTCTC
63 GGATTAGGCACCATAAACACATT-CTTCTCATAAGGAT-ACATGATATTGATGCTTTGGTTTCGC
14841 AAGAGAAGCCTTTCTTTCTACCGTTATTGATAG
126 AAGAGAAGCCTTTCTTTCTACCGTTATTGATAG
* * * * * * *
14874 AATCAAAGTTTGTCACTTAAATAAGGCAAAG-ATGAATACTCATACTAATCTCCAATCTTTTTAG
1 AATCAAAGTTTGTCTCTTAAATGAGAC-AAGCATGAATTCTCATA-TAATCCCCATTCTTTTCAG
* * * * * * *
14938 GTTTAGGCAGCACAAACATAGTCTTCTCATAAGGATACATGATATTGACGCTTTGGTTTCGCAAT
64 GATTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * **
15003 A-AA-CACTTTCTTCCCACCAATT-TTTCTA-
129 AGAAGC-CTTTCTTTCTACC-GTTATTGATAG
* ** * * * * * ** * ** *
15031 AATTCTAAGTTCCTAC-CTCAAATGAGGCAAACATGGATTTTTGTAAAGATCTTCATTCATTTCA
1 AA-TCAAAGTTTGT-CTCTTAAATGAGACAAGCATGAATTCTCATATA-ATCCCCATTCTTTTCA
* * * * * ** * *
15095 TGATTAGGCACAATAAACACATTCTTCTCATTAGGATAAATGATATTTAT-CGTTTTCTTTTGTA
63 GGATTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGC-TTTGGTTTCGCA
* * * * * ** * ** *
15159 CGAAAATCTTTTC-TTC-GCTTTTTTTTCCTTAA
127 AGAGAAGCCTTTCTTTCTAC-CGTTATT-GATAG
* * * ***
15191 AATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCATGA-AAGTCCCTAATCTTGAA
1 AATCAAAGTTTGT-CTCTTAAATGAGACAAGCA-TGAATTCTCAT-ATAA-TCCCCATTCTTTTC
* * * * * * * * * **
15253 AAGATTGGGAACCAAAAACACATTCCTT-TCATTAGGATACAAGACATTAACGCTTTGGGGTCGC
62 AGGATTAGGCACCATAAACACATT-CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGC
15317 AAGAGAAGCCTTTCTTTCTACCGTTATTGATAG
126 AAGAGAAGCCTTTCTTTCTACCGTTATTGATAG
* * * * *
15350 AATCAAAGTTTGTCTCTTAAATAAGACAGGCAAGAATACTCATACTAATCCCCTTTCTTTTCAGG
1 AATCAAAGTTTGTCTCTTAAATGAGACAAGCATGAATTCTCATA-TAATCCCCATTCTTTTCAGG
*
15415 ATTAGGCACCATAAACATAGTT-TTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
65 ATTAGGCACCATAAACACA-TTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * *
15479 ATACG-CTTTCTTCCCACCTATTTTTG-TA-
129 AGAAGCCTTTCTTTCTACC-GTTATTGATAG
* * * ** *
15507 AAGT-ATAAGTTCT-TAC-CTCAAATGAGACAAACATGGATTCT-AGTA-AGGATCTTCATTCAT
1 AA-TCA-AAGTT-TGT-CTCTTAAATGAGACAAGCATGAATTCTCA-TATA--ATCCCCATTCTT
* * * ** * * **
15567 TTC-GTGATTAGGCACTATAAGCATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
59 TTCAG-GATTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
* ** ** ** *
15631 TGCGTG-GAAATCTTTCTTTGCCTTA-C-TT-TCCATAA
123 CGCAAGAGAAGCCTTTCTTT--C-TACCGTTATTGATAG
** * * *
15666 AATCATTGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTAAAAGTCCCCATTCTTTTCA
1 AATCAAAGTTTGT-CTCTTAAATGAGACAAGCA-TGAATTCTCATATAA-TCCCCATTCTTTTCA
* * * * * * * * * **
15729 AGAATGGGAACCAAAAACACATTCCTT-TCATTAGGATACAAGACATTAATGCTTTGGGGTCGCA
63 GGATTAGGCACCATAAACACATT-CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCA
* *
15793 AGAGAGGCCTTTCTTTCTACTGTTATTGATAG
127 AGAGAAGCCTTTCTTTCTACCGTTATTGATAG
* * * * *
15825 AATCAAAGTTTGTCACTTAAATAAGGCAAACATGAATACTCATA
1 AATCAAAGTTTGTCTCTTAAATGAGACAAGCATGAATTCTCATA
15869 CTGATGACAA
Statistics
Matches: 1378, Mismatches: 424, Indels: 272
0.66 0.20 0.13
Matches are distributed among these distances:
151 3 0.00
152 57 0.04
153 37 0.03
154 6 0.00
155 7 0.01
156 10 0.01
157 98 0.07
158 636 0.46
159 481 0.35
160 38 0.03
161 5 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (158 bp):
AATCAAAGTTTGTCTCTTAAATGAGACAAGCATGAATTCTCATATAATCCCCATTCTTTTCAGGA
TTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAG
AAGCCTTTCTTTCTACCGTTATTGATAG
Found at i:15574 original size:951 final size:944
Alignment explanation
Indices: 13742--15870 Score: 3356
Period size: 951 Copynumber: 2.2 Consensus size: 944
13732 GATCCTAACA
*
13742 GAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
1 GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* * * ** * * *
13807 ATTCTCGTAAAACTCCCTAATCTTTGAAAGATTGGGAACCAAAAACGCATTCCTGTCATTAGGAT
66 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
* *
13872 ACAAGACATTAGTGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACTGTTATTGATAGAATCAA
131 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACTGTTATTGATAGAATCAA
*
13937 ACTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCTAATCTTTTCAGGATTAGG
196 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCTAATCTTTTCAGGATTAGG
* * * * *
14002 CAGCATAAACGTAGCCTTCTCCTAAGGAAACATGACAGTGATGCTTTGGTTTCGCAATAAACGCT
261 CAGCACAAACATAGCCTTCTCATAAGGAAACATGACAGTGACGCTTTGGTTTCGCAATAAACACT
14067 TTCTTCCCACCAATTTTTCTAAATTCAAAGTTCCCACCTCAAATGAGACAAACATGGATTCTAGT
326 TTCTTCCCACCAATTTTTCTAAATTCAAAGTTCCCACCTCAAATGAGACAAACATGGATTCTAGT
* * * * *
14132 AAGAATCTTCATTATTTTCGTGATTAGGCACTATAATCACATCTCCTCATCAGGATACATTATAT
391 AAGAATCTTCATTATTTTCATGATTAGGCACAATAAACACATCTCCTCATCAGGATAAATGATAT
* * * *
14197 TGATGGTTTTCTTTTGCCTGGAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTAAA
456 TGATCGTTTTCTTTTGACTGAAAATCTTTCTTCGCCTTATTTTCCATAAAATCAAAGTTTGTAAA
* * ****
14262 TGAGACATGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCTGGAATGGGAACCAAAAACACATT
521 TGAGACATGCATTGATTCTCATAAAAGTCCCCAATCCTTAAAAGAATGGGAACCAAAAACACATT
*
14327 CCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTA
586 CCTTTCATTAGGATAAAGACATTAACGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTA
* * * * *
14392 TTGATAGTATCAATGTTTGTCACTTAAATAAGGCAAACATCAATGCTCATACTAATCCCCTTTCT
651 TTGATAGAATCAAAGTTTGTCACTTAAATAAGACAAACAACAATACTCATACTAATCCCCTTTCT
14457 TTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
716 TTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
*
14522 CGCAAGATACGCTTTCTTCCCGCCTATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAA
781 CGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAA
* *
14587 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATC
846 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAGCACATTCCCCTCATC
* *
14652 AGGATGCATGATATTGATGGTTTTCTTTTGCATT
911 AGGATACATGATATTGATGGTTTTCTTTTGCATG
* *
14686 GAAATCTTTTCTTCGCCTTATTTTCCATAAAATCAAAGTTTATACTTTAAATGAGACATGCATTG
1 GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
*
14751 ATTCTCGTAAAAGTCCCCATTCTTTTCAGGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
66 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
* * *
14816 -GAAGACATTAATGCTTTGGGGTCTCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAA
131 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACTGTTATTGATAGAATCAA
* * *
14880 AGTTTGTCACTTAAATAAGGCAAAGATGAATACTCATACTAATCTCC-AATCTTTTTAGGTTTAG
196 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATC-CCTAATCTTTTCAGGATTAG
* * * *
14944 GCAGCACAAACATAGTCTTCTCATAAGGATACATGATATTGACGCTTTGGTTTCGCAATAAACAC
260 GCAGCACAAACATAGCCTTCTCATAAGGAAACATGACAGTGACGCTTTGGTTTCGCAATAAACAC
* * * * *
15009 TTTCTTCCCACCAATTTTTCTAAATTCTAAGTTCCTACCTCAAATGAGGCAAACATGGATTTTTG
325 TTTCTTCCCACCAATTTTTCTAAATTCAAAGTTCCCACCTCAAATGAGACAAACATGGATTCTAG
* *
15074 TAA-AGATCTTCATTCA-TTTCATGATTAGGCACAATAAACACATTCTTCTCATTAGGATAAATG
390 TAAGA-ATCTTCATT-ATTTTCATGATTAGGCACAATAAACACA-TCTCCTCATCAGGATAAATG
* * * *
15137 ATATTTATCGTTTTCTTTTGTAC-GAAAATCTTTTCTTCGCTTTTTTTTCCTTAAAATCAAAGTT
452 ATATTGATCGTTTTCTTTTG-ACTGAAAATC-TTTCTTCGCCTTATTTTCCATAAAATCAAAGTT
* * *
15201 TGTACTTTAAATGAGACATGCATTGATTCTCATGAAAGTCCCTAAT-CTTGAAAAGATTGGGAAC
515 TG-----TAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCCTT-AAAAGAATGGGAAC
15265 CAAAAACACATTCCTTTCATTAGGATACAAGACATTAACGCTTTGGGGTCGCAAGAGAAGCCTTT
574 CAAAAACACATTCCTTTCATTAGGATA-AAGACATTAACGCTTTGGGGTCGCAAGAGAAGCCTTT
* ** *
15330 CTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAGGCAAGAATACTCATAC
638 CTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATAAGACAAACAACAATACTCATAC
15395 TAATCCCCTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATT
703 TAATCCCCTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATT
15460 GATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTC-TTACC
768 GATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATT-CC
15524 TCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAGC
832 TCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAGC
* *
15589 ATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCGTG
897 ACATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATG
* **
15637 GAAATC-TTTCTTTGCCTTACTTTCCATAAAATCATTGTTTGTACTTTAAATGAGACATGCATTG
1 GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
15701 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
66 ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
*
15766 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAGGCCTTTCTTTCTACTGTTATTGATAGAATCAA
131 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACTGTTATTGATAGAATCAA
15831 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACT
196 AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACT
15871 GATGACAACC
Statistics
Matches: 1083, Mismatches: 87, Indels: 23
0.91 0.07 0.02
Matches are distributed among these distances:
942 1 0.00
943 267 0.25
944 161 0.15
945 32 0.03
949 3 0.00
950 190 0.18
951 429 0.40
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (944 bp):
GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
ATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGAT
ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACTGTTATTGATAGAATCAA
AGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCTAATCTTTTCAGGATTAGG
CAGCACAAACATAGCCTTCTCATAAGGAAACATGACAGTGACGCTTTGGTTTCGCAATAAACACT
TTCTTCCCACCAATTTTTCTAAATTCAAAGTTCCCACCTCAAATGAGACAAACATGGATTCTAGT
AAGAATCTTCATTATTTTCATGATTAGGCACAATAAACACATCTCCTCATCAGGATAAATGATAT
TGATCGTTTTCTTTTGACTGAAAATCTTTCTTCGCCTTATTTTCCATAAAATCAAAGTTTGTAAA
TGAGACATGCATTGATTCTCATAAAAGTCCCCAATCCTTAAAAGAATGGGAACCAAAAACACATT
CCTTTCATTAGGATAAAGACATTAACGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTA
TTGATAGAATCAAAGTTTGTCACTTAAATAAGACAAACAACAATACTCATACTAATCCCCTTTCT
TTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
CGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAA
CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAGCACATTCCCCTCATC
AGGATACATGATATTGATGGTTTTCTTTTGCATG
Found at i:19340 original size:18 final size:18
Alignment explanation
Indices: 19297--19346 Score: 50
Period size: 18 Copynumber: 2.8 Consensus size: 18
19287 TCCATCTTCT
*
19297 TCTCTCCTCT-TCCTGTTA
1 TCTCTCCTCTCT-CTATTA
19315 TC-CTTCCTCTCTCTATTA
1 TCTC-TCCTCTCTCTATTA
*
19333 TCTCTCCTGTCTCT
1 TCTCTCCTCTCTCT
19347 CCTCCTATCA
Statistics
Matches: 27, Mismatches: 2, Indels: 6
0.77 0.06 0.17
Matches are distributed among these distances:
17 1 0.04
18 24 0.89
19 2 0.07
ACGTcount: A:0.06, C:0.40, G:0.04, T:0.50
Consensus pattern (18 bp):
TCTCTCCTCTCTCTATTA
Found at i:19363 original size:24 final size:24
Alignment explanation
Indices: 19327--19412 Score: 76
Period size: 24 Copynumber: 3.8 Consensus size: 24
19317 CTTCCTCTCT
* *
19327 CTATTATCTCTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
* *
19351 CTATCATCCCTCC--TATCT-CTA
1 CTATCATCCCTCCTGTCTCTCCTC
19372 CTATC-T--CTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
* *
19393 CTATCATCCATCCTCTCTCT
1 CTATCATCCCTCCTGTCTCT
19413 TCTTTCTCTT
Statistics
Matches: 48, Mismatches: 8, Indels: 12
0.71 0.12 0.18
Matches are distributed among these distances:
18 4 0.08
20 5 0.10
21 14 0.29
22 5 0.10
24 20 0.42
ACGTcount: A:0.12, C:0.44, G:0.02, T:0.42
Consensus pattern (24 bp):
CTATCATCCCTCCTGTCTCTCCTC
Found at i:19377 original size:42 final size:42
Alignment explanation
Indices: 19314--19421 Score: 162
Period size: 42 Copynumber: 2.6 Consensus size: 42
19304 TCTTCCTGTT
* *
19314 ATCCTTCCTCTCTCTATTATCTCTCCTGTCTCTCCTCCTATC
1 ATCCATCCTCTCTCTACTATCTCTCCTGTCTCTCCTCCTATC
* *
19356 ATCCCTCCTATCTCTACTATCTCTCCTGTCTCTCCTCCTATC
1 ATCCATCCTCTCTCTACTATCTCTCCTGTCTCTCCTCCTATC
* *
19398 ATCCATCCTCTCTCTTCTTTCTCT
1 ATCCATCCTCTCTCTACTATCTCT
19422 TTGAGGGCTA
Statistics
Matches: 59, Mismatches: 7, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
42 59 1.00
ACGTcount: A:0.10, C:0.44, G:0.02, T:0.44
Consensus pattern (42 bp):
ATCCATCCTCTCTCTACTATCTCTCCTGTCTCTCCTCCTATC
Found at i:19387 original size:18 final size:18
Alignment explanation
Indices: 19319--19388 Score: 50
Period size: 18 Copynumber: 3.6 Consensus size: 18
19309 CTGTTATCCT
* *
19319 TCCTCTCTCTATTATCTC
1 TCCTGTCTCTACTATCTC
*
19337 TCCTGTCTCTCCTCCTATCATCCC
1 TCCTG--TCT-CTACTATC-T--C
*
19361 TCCTATCTCTACTATCTC
1 TCCTGTCTCTACTATCTC
19379 TCCTGTCTCT
1 TCCTGTCTCT
19389 CCTCCTATCA
Statistics
Matches: 40, Mismatches: 6, Indels: 12
0.69 0.10 0.21
Matches are distributed among these distances:
18 14 0.35
20 4 0.10
21 13 0.32
22 4 0.10
24 5 0.12
ACGTcount: A:0.10, C:0.43, G:0.03, T:0.44
Consensus pattern (18 bp):
TCCTGTCTCTACTATCTC
Found at i:21956 original size:158 final size:157
Alignment explanation
Indices: 21794--33867 Score: 1513
Period size: 158 Copynumber: 76.4 Consensus size: 157
21784 GCCTGGAAAT
**
21794 CTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTCTACTTTAAATGAGACATGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * *
21859 GTAAAAGTCCCCATTCCTTTCTGGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATT-CTTTCATTAGGATACAAGA
21923 CATTAATGCTTTGGGGTCGCAAGAGAAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
21952 CTTTCTTTCTACCGTTA--TTAATAGAATCAAAGTTTGT-CATTTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTAC-TTTAAATGAGACAAACATTG-AT
* * * * * * * * *
22013 ACTTATACTAA-TCCCCTTTCTTTTCAGGATTAGGCACCATAAACATAGTT-TTCTCATAAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * ** ** * *
22076 ACATGATATTGGTGCTTTGGTTTCGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** * ** * * * * *
22110 CTTTCTTCCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAATGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* * ** * * * * * * *
22173 T-AGT-AAGGATCTTCC-TTCAATTC-GTGATTAGGCACTATAATCACATTCTCCTCATCAGGAT
63 TCA-TAAAAG-TC-CCCATTCTTTTCAG-GAATAGGAACCAAAAACACATTCT-TTCATTAGGAT
* * * * **** * * *
22234 ACATGATATTGATGGTTTTCTTTTGCACG-GAAATC
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAG-AAGC
* * * * **
22269 TTTTCTTCGCCTTATTTTCCATAATATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* *
22334 ATAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATT-CTTTCATTAGGATACAAGA
*
22398 CATTAATGCTTTGGGGTCTCAAGAGAAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * *
22427 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGT-CTATTAAATAAGGCAAACA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* ** * ** * * * * * *
22488 ACTCATTCTAA-TCTCCATTCTTTTCAGGCTTAGGCAGCACAAACATAGTCTTCTCATAAGGATA
61 TCTCA-TAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * * ** *
22552 CATGATAGTGACGCTTTGGTTTCGCAATA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** * * * *** *
22584 ACTTTCTTCCCACCAATTTTTC-TAAATTCTAAGTTCCTACCACAAATGA-AGCAAACATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGA-CAAACATTGATT
* ** ** * * *
22647 TTTGT-AAAGATCTTCATTCATTTC-GTGATTAGGCA-CAATAAACACATTCTTCTCATTAGGAT
62 CTCATAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAA-AAACACATTCTT-TCATTAGGAT
* * * **** * * * * *
22709 A-AATGATATTTATGGTTTTCTTTTGTACGAAAATC
123 ACAA-GACATTAATGCTTTGGGGTCGCAAGAGAAGC
* ** * * **
22744 TTTTCTTCACCTTATTTTTCGTAAAATCAAAGTTTATACTTTAAATGAGACATGCATTGATTCTC
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
22809 GTAAAAGTCCCCAATCTTTCCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATT-CTTTCATTAGGATACAAGA
*
22873 CATTAATGCTTTGGGGTCGTAAGAGAAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
22902 CTTTCTTT-CTACTGT-TATTGATAGAATCAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTCTTTGC--CT-TATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * ** *
22963 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAACATAGCCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * ** **
23027 CATGATAGTGGTGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * ** * * *
23059 ACTTTCTTCT-CATCAATTTTTC-TAAATTTTAAG-TTCTTACCTCAAATGAGACAAACATGGAT
1 -CTTTCTT-TGCCT-TA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGAT
* ** * * * *** * ** *
23121 TCT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGA
61 TCTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGA
* * * * **** * * **
23183 TACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
122 TACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * ** *
23218 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
23283 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
23348 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * * * * *
23377 TTTTCTTTCTACCGT-TTTTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAAGA-AGAATA
1 CTTTC-TT-TGCCTTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-ATT
* * * ** * * *
23439 CTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGATA
62 CTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGATA
* * * * ** * * *
23502 CATGATATTGATGCTTCGGTTTTGCAAGATACG-
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
23535 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
23598 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
23660 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* *
23693 CTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAG----ACATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
23754 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
*
23817 ACATTAATGCTTTGGGGTCGTAAGAGAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
23847 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
23908 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
23972 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * *
24004 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGACAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * **** * ** *
24067 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCATTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
24129 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * ** *
24163 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
24228 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
24293 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * * * * *
24322 TTTTCTTTCTACCGT-TTTTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAAGA-AGAATA
1 CTTTC-TT-TGCCTTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-ATT
* * * ** * * *
24384 CTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGATA
62 CTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGATA
* * * * ** * * *
24447 CATGATATTGATGCTTCGGTTTTGCAAGATACG-
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
24480 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
24543 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
24605 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * **
24638 CTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
24703 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
*
24766 ACATTAATGCTTTGGGGTCGTAAGAGAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * *
24796 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGTCAC-TTAAAT-AAATCAAACA-TGAA
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGA-CAAACATTG-A
* * * * * * * * * * *
24856 TACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGAT
60 TTCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGAT
* * * * **
24920 ACATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * *
24953 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGACAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
25016 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
25078 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * ** *
25112 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
25177 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
25242 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * *
25271 TTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAACA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* * * * ** * * *
25332 ACTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * * * *** * * *
25395 ACATGATATTGATGCTTCGATTTTGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
25429 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
25492 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
25554 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* **
25587 CTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
25652 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
*
25715 ACATTAATGCTTTGGGGTCGTAAGAGAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
25745 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
25806 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
25870 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * *
25902 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGACAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
25965 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
26027 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * ** *
26061 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * *
26126 GTAAGAGACCCCATTCTTTTC-GAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAG
65 ATAAAAGTCCCCATTCTTTTCAG-GAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAG
*
26190 ACATTAATGCTTTGGGGTCGCAAGAGGAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * * *
26220 TTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAAGA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* * * * ** * * *
26281 ACTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * * * ** * * *
26344 ACATGATATTGATGCTTCGGTTTTGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
26378 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
26441 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
26503 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* **
26536 CTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
26601 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
*
26664 ACATTAATGCTTTGGGGTCGTAAGAGAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * *
26694 CTTTCTTTCTACCGTTA--TTGATAGAATTAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
26755 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
26819 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * *
26851 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGACAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
26914 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * *** * * **
26976 ACATGATATTGATGGTTTTCTGTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * ** *
27010 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * * *
27075 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAGCACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
27140 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * *
27169 TTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAACA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* * * * ** * * *
27230 ACTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * * * ** * * *
27293 ACATGATATTGATGCTTCGGTTTTGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
27327 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
27390 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
27452 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* **
27485 CTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
27550 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
*
27613 ACATTAATGCTTTGGGGTCGTAAGAGAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
27643 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTATCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
27704 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
27768 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * *
27800 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGACAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
27863 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
27925 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * ** *
27959 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
28024 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
28089 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * *
28118 TTTTCTTTCTACCGTTA--TTCATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAAGA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* * * * ** * * *
28179 ACTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * * * ** * * *
28242 ACATGATATTGATGCTTCGGTTTTGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
28276 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
28339 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
28401 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * **
28434 CTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
28499 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
*
28562 ACATTAATGCTTTGGGGTCGTAAGAGAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
28592 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
28653 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
28717 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * * *
28749 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGATAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
28812 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
28874 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * ** *
28908 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
28973 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
29038 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * * *
29067 TTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAAGA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* * * * ** * * *
29128 ACTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * * * ** * * *
29191 ACATGATATTGATGCTTCGGTTTTGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
29225 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
29288 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
29350 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* **
29383 CTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
29448 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
*
29511 ACATTAATGCTTTGGGGTCGTAAGAGAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
29541 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
29602 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
29666 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * *
29698 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGACAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
29761 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
29823 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * ** *
29857 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
29922 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
29987 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * *
30016 TTTTCTTTCTACCGTTA--TTCATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAACA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* * * * ** * * *
30077 ACTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * * * ** * * *
30140 ACATGATATTGATGCTTCGGTTTTGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
30174 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
30237 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
30299 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * **
30332 CTTTCTTTTCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * ** *
30397 GTAAAAGTCCTCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
*
30460 ACATTAATGCTTTGGGGTCGTAAGAGAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
30490 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
30551 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
30615 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * * *
30647 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGATAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
30710 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
30772 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * ** *
30806 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
30871 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
30936 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * * *
30965 TTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAAGA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* * * * ** * * *
31026 ACTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * * * ** * * *
31089 ACATGATATTGATGCTTCGGTTTTGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
31123 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
31186 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
31248 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* **
31281 CTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
31346 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
*
31409 ACATTAATGCTTTGGGGTCGTAAGAGAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
31439 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
31500 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
31564 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * *
31596 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGACAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
31659 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
31721 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * ** *
31755 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
31820 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
31885 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * * *
31914 TTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAAGA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* * * * ** * * *
31975 ACTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * * * ** * * *
32038 ACATGATATTGATGCTTCGGTTTTGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * ** * * * * * *
32072 CTTTCTTTCCACCTATTTTTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATTC
1 CTTTCTTTGC-CTTATTTTCATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATTC
* ** * * * *** * ** *
32135 T-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATA
63 TCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGATA
* * * **** * ** **
32197 CATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * **
32230 CTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
32295 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
* *
32358 ACATTAATGCTTTGGGGTCGTAAGAGAAAC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
32388 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
32449 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
32513 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * *
32545 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGACAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
32608 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
32670 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * ** *
32704 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * * *
32769 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
32834 CATTAATGCTTTGGGGTCGCAAGAGGAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * *
32863 TTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAACA-AGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACATTG-AT
* * * * ** * * *
32924 ACTCATACTAA-TCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT-TTCTCATTAGGAT
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACA-TTCTT-TCATTAGGAT
* * * * ** * * *
32987 ACATGATATTGATGCTTCGGTTTTGCAAGATACG-
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * * * * *
33021 CTTTCTTTCCACCTA-TTTCTGTAAAGT-ATAAG-TTCATTCCTCAAAAGAGACAAACATGGATT
1 CTTTCTTTGC-CTTATTTTC-ATAAAATCA-AAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
33083 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * **** * ** **
33145 ACATGATATTAATGGTTTTCTTTTGCGTGA-AAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* **
33179 CTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACGCATTGATTCTC
1 CTTTCTTTGCCTTATTTT-CATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * ** *
33244 GTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACACCTTCCTTTCATTAGGATA-AAG
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGG-AACCAAAAACACATT-CTTTCATTAGGATACAAG
* *
33307 ACATTAATGCTTTGGGGTCGTAAGAAAAGC
128 ACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * * * *
33337 CTTTCTTTCTACCGTTA--TTGATAGAATCAAAGTTTGTCAC-TTAAATAAGGCAAACA-TGAAT
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCT-ACTTTAAATGAGACAAACATTG-AT
* * * * * * * * * * *
33398 ACTCATACTAA-TCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGATA
61 TCTCATA-AAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTT-TCATTAGGATA
* * * * **
33462 CATGATAGTGATGCTTTGGTTTCGCAAGA-AA-C
124 CAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
** ** ** * * * *
33494 ACTTTCTTCCCACCAATTTTTC-TAAAATTTAAG-TTCTTACCTCAAATGAGACAAATATGGATT
1 -CTTTCTTTGC-CTTA-TTTTCATAAAATCAAAGTTTC-TACTTTAAATGAGACAAACATTGATT
* ** * * * *** * ** *
33557 CT-AGT-AAGGATCTTCATTCATTTC-GTGATTAGGCACTGTAAACATATTCCCCTCATCAGGAT
62 CTCA-TAAAAG-TCCCCATTCTTTTCAG-GAATAGGAACCAAAAACACATT-CTTTCATTAGGAT
* * * * **** * * **
33619 ACATGATATTGATGGTTTTCTTTTGCATG-GAAAT
123 ACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * ** *
33653 CTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTG
1 CTTTCTTTGCCTTA-TTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTC
* * * * *
33718 GTAAGAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
65 ATAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACAC-ATTCTTTCATTAGGATACAAGA
*
33783 CATTAATACTTTGGGGTCGCAAGAGAAGC
129 CATTAATGCTTTGGGGTCGCAAGAGAAGC
* * * *
33812 CTTTCTTTCTACCATTA-TTT-ATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACA
1 CTTTC-TT-TGCC-TTATTTTCATAAAATCAAAGTTTCTACT-TTAAATGAGACAAACA
33868 AGAATACTCA
Statistics
Matches: 8275, Mismatches: 2870, Indels: 1541
0.65 0.23 0.12
Matches are distributed among these distances:
153 19 0.00
154 75 0.01
155 9 0.00
156 96 0.01
157 674 0.08
158 5262 0.64
159 1929 0.23
160 95 0.01
161 86 0.01
162 30 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (157 bp):
CTTTCTTTGCCTTATTTTCATAAAATCAAAGTTTCTACTTTAAATGAGACAAACATTGATTCTCA
TAAAAGTCCCCATTCTTTTCAGGAATAGGAACCAAAAACACATTCTTTCATTAGGATACAAGACA
TTAATGCTTTGGGGTCGCAAGAGAAGC
Found at i:23301 original size:949 final size:949
Alignment explanation
Indices: 21030--33922 Score: 23524
Period size: 949 Copynumber: 13.6 Consensus size: 949
21020 GTTTTCATCA
** * * * * *
21030 AATACTCATACTAATCCCCTTTTTTTTCAAGATTAGGCACCATAAACATAGTTTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
*
21095 TACATGATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCT-AAATTCT
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATT-T
* *
21159 AAGTTCTTACCTCAACTGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAG
130 AAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAG
*
21224 GCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCGTGGAAATC
195 GCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATC
* * *
21289 TTTCTTTGCCTTACTTTCCATTAAATCATTAGTTTGTACTTTAAATGAGACATGCATTGATTCTC
260 TTTCTTTACCTTACTTTCCATAAAATCA-AAGTTTGTACTTTAAATGAGACATGCATTGATTCT-
21354 GTAAAAGACATTAATGCATTGATTCTTGTTTGCCTTACTTTCCATTCTTTTCAAGAATGGGAACC
323 G-----G----TAA-G-A--GA-----------C---C---CCATTCTTTTCAAGAATGGGAACC
* * * *
21419 AAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCTCAAGAGAAGCCTTTC
358 AAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGGAGCTTTTC
* *
21483 TTTCTACCGATATTGATTGAATCAAAGTTTGTCTCTTAAATAAGGCAAACAAGAATACTCATACT
423 TTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGGCAAACAAGAATACTCATACT
* * * * * * * * *
21548 AATCCCCATTCTTTTCAGGATTAGGTAGCGTAAACATAGTCTTCTCATAAGGATACATGATAGTG
488 AATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATTAGGATACATGATATTG
* * * * * * * * ** * *
21613 ATGCTTTGGTTTCGGAAGA-ATCACTTTCTTCCCACCAATTTTTCTAAATTCCAAGTTCCTACCT
553 ATGCTTCGGTTTTGCAAGATA-CGCTTTCTTTCCACCTATTTTTGTAAAGTATAAGTTCATTCCT
* * * * * * * *
21677 CAAATGAGACTAACATGGATTCTAGTAAGAATCTTCATTCTTTTTGAAGATTAGGCACTATAATC
617 CAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG-TGATTAGGCACTGTAAAC
* * * * *
21742 ACA-TCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTCTTTGCCT
681 ATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTTTGCGTGAAAATCTTTCTTTGCCT
* *
21806 TATTTTCCATAAAATCAAAGTTTCTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCC
746 TATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACGCATTGATTCTCGTAAAAGTCCCC
*** * *
21871 ATTCCTTTCTGGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTTTG
811 ATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTTTG
* * *
21936 GGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTAATAGAATCAAAGTTTGTCATTTAAATAAG
876 GGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATAAG
22001 GCAAACATG
941 GCAAACATG
* ** * * *
22010 AATACTTATACTAATCCCCTTTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
* * * * * * * *
22075 TACATGATATTGGTGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
* * *
22140 AGTTCATT-CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCCTTCAATTCGTGATTAG
131 AGTTC-TTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAG
* * * * *
22204 GCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCACGGAAATC
195 GCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATC
** * * *
22269 TTTTCTTCGCCTTATTTTCCATAATATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTC
260 -TTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTG
* * * *
22334 ATAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGA
324 GTAAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGA
* * *
22398 CATTAATGCTTTGGGGTCTCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTG
389 CATTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTG
* * * * * * * *
22463 TCTATTAAATAAGGCAAACAAGAATACTCATTCTAATCTCCATTCTTTTCAGGCTTAGGCAGCAC
454 TCTCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCAT
* * * * * * * * * *
22528 AAACATAGTCTTCTCATAAGGATACATGATAGTGACGCTTTGGTTTCGCAATAAACACTTTCTTC
519 AAACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTT
* * * * * * * * * * *
22593 CCACCAATTTTTCTAAATTCTAAGTTCCTACCACAAATGA-AGCAAACATGGATTTTTGTAAAGA
584 CCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGA-CAAACATGGATTCTAGTAAGGA
** * ** * * *
22657 TCTTCATTCATTTCGTGATTAGGCACAATAAACACATTCTTCTCATTAGGATAAATGATATTTAT
648 TCTTCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAAT
*** ** * * *
22722 GGTTTTCTTTTGTACGAAAATCTTTTCTTCACCTTATTTTTCGTAAAATCAAAGTTTATACTTTA
713 GGTTTTCTTTTGCGTGAAAATC-TTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTA
* * * * *
22787 AATGAGACATGCATTGATTCTCGTAAAAGTCCCCAAT-CTTTCCAAGATTGGGAACCAAAAACAC
777 AATGAGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTT-CAAAAATGGCAACCAAAAACAC
* *
22851 ATTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACTG
841 CTTCCTTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCG
22916 TTATTGATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
906 TTATTGATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
* *
22960 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAACATAGCCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
* * * *
23025 TACATGATAGTGGTGCTTTGGTTTCGCAAGAAACACTTTCTTCTCATCAATTTTTCTAAATTTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
*
23090 AGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
23155 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
23220 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
23285 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
*
23350 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTTTTGATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
*
23415 TCTTAAATAAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
23480 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
23545 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
23610 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
*
23675 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
23740 AG--A--CATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
23801 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
23866 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
23905 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
23970 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
24035 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
*
24100 CATTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
*
24165 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
24230 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
*
24295 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTTTTGATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
*
24360 TCTTAAATAAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
24425 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
24490 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
24555 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
*
24620 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
24685 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
24750 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
**
24815 GATAGAATCAAAGTTTGTCACTTAAATAAATCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
24854 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
24919 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
24984 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
25049 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
*
25114 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
25179 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
25244 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
25309 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
*
25374 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGATTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
25439 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
25504 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
25569 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
25634 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
25699 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
25764 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
25803 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
25868 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
25933 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
25998 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
26063 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
*
26128 AAGAGACCCCATTCTTTTCGAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
26193 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
*
26258 TCTTAAATAAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
26323 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
26388 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
26453 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
26518 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
26583 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
26648 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
*
26713 GATAGAATTAAAGTTTGTCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
26752 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
26817 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
26882 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
*
26947 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTGTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
*
27012 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
*
27077 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAGCACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
27142 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
27207 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
27272 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
27337 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
27402 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
27467 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
27532 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
27597 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
*
27662 GATAGAATCAAAGTTTATCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
27701 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
27766 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
27831 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
27896 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
27961 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
28026 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
*
28091 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTCATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
*
28156 TCTTAAATAAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
28221 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
28286 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
28351 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
*
28416 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
28481 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
28546 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
28611 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
28650 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
28715 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
*
28780 AGTTCTTACCTCAAATGAGATAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
28845 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
*
28910 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
28975 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
29040 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
*
29105 TCTTAAATAAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
29170 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
29235 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
29300 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
29365 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
29430 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
29495 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
29560 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
29599 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
29664 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
29729 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
29794 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
29859 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
29924 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
*
29989 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTCATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
30054 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
30119 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
30184 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
30249 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
* *
30314 TTTCTTTTGCGTGAAAATCTTTCTTTTCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
*
30379 AGACACGCATTGATTCTCGTAAAAGTCCTCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
30444 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
30509 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
30548 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
30613 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
*
30678 AGTTCTTACCTCAAATGAGATAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
30743 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
*
30808 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
30873 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
30938 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
*
31003 TCTTAAATAAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
31068 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
31133 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
31198 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
31263 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
31328 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
31393 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
31458 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
31497 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
31562 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
31627 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
31692 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
31757 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
31822 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
31887 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
*
31952 TCTTAAATAAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
32017 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
32082 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
32147 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
*
32212 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
32277 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
*
32342 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAACCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
32407 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
32446 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
32511 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
32576 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
32641 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
*
32706 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
32771 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
32836 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
32901 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
32966 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
521 ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
*
33031 ACCTATTTCTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
586 ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
33096 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
651 TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
33161 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
716 TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
33226 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
781 AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
*
33291 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAAAAGCCTTTCTTTCTACCGTTATT
846 TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
33356 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
911 GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
33395 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
1 AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
33460 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
66 TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
33525 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
131 AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
33590 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
196 CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
33655 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
261 TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
*
33720 AAGAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
326 AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
* * * * *
33785 TTAATACTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCATTATTTATAGAATCAAAGTTTGTC
391 TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
*
33850 TCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
456 TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
33915 ACATAGTT
521 ACATAGTT
33923 GAAAGCTTAT
Statistics
Matches: 11663, Mismatches: 234, Indels: 63
0.98 0.02 0.01
Matches are distributed among these distances:
945 924 0.08
946 4 0.00
947 2 0.00
948 19 0.00
949 9675 0.83
950 735 0.06
951 1 0.00
952 1 0.00
955 1 0.00
966 1 0.00
968 1 0.00
970 3 0.00
980 267 0.02
981 29 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (949 bp):
AATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCTTCTCATAAGGA
TACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTCTAAAATTTA
AGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
CACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCT
TTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGT
AAGAGACCCCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACA
TTAATGCTTTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC
TCTTAAATAAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAA
ACATAGTTTTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCC
ACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCT
TCATTCATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGT
TTTCTTTTGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
AGACACGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCC
TTTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATT
GATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATG
Found at i:25039 original size:474 final size:474
Alignment explanation
Indices: 21395--33921 Score: 19493
Period size: 475 Copynumber: 26.4 Consensus size: 474
21385 GCCTTACTTT
21395 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
* * *
21460 TGGGGTC-TCAAGAGAAGCCTTTCTTTCTACCGATATTGATTGAATCAAAGTTTGTCTCTTAAAT
66 TGGGGTCGT-AAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* *
21524 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGTAGCGTAAACATAGTC
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* *
21589 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGGAAGAATCACTTTCTTCCCACCAATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * * *
21654 TTCT-AAATTCCAAGTTCCTACCTCAAATGAGACTAACATGGATTCTAGTAAGAATCTTCATTCT
260 TTCTAAAATT-TAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
* * * * * *
21718 TTTTGAAGATTAGGCACTATAATCACA-TCTCCTCATCAGGATACATGATATTGATGGTTTTCTT
324 TTTCG-TGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTT
* * *
21782 TTGCCTGGAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTCTACTTTAAATGAGACAT
388 TTGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACAT
21847 GCATTGATTCTCGTAAAAGTCC
453 GCATTGATTCTCGTAAAAGTCC
* **
21869 CCATTCCTTTCTGGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
* * *
21934 TGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTAATAGAATCAAAGTTTGTCATTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * * * *
21999 AGGCAAACATGAATACTTATACTAATCCCCTTTCTTTTCAGGATTAGGCACCATAAACATAGTTT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
* * * * *
22064 TCTCATAAGGATACATGATATTGGTGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCTATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
* * * * *
22129 TGTAAAGTATAAGTTCATT-CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCCTTCAA
261 TCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCAT
* * * *
22193 TTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
325 TTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
* ** *
22258 GCACGGAAATCTTTTCTTCGCCTTATTTTCCATAATATCAAAGTTTGTACTTTAAATGAGACATG
390 GCATGGAAATC-TTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
*
22323 CATTGATTCTCATAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
22344 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
22409 TGGGGTC-TCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTA-TTAAA
66 TGGGGTCGT-AAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTC-ACTTAAA
* * * *
22472 TAAGGCAAACAAGAATACTCATTCTAATCTCCATTCTTTTCAGGCTTAGGCAGCACAAACATAGT
129 TAAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGT
* *
22537 CTTCTCATAAGGATACATGATAGTGACGCTTTGGTTTCGCAATAAACACTTTCTTCCCACCAATT
194 CTTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATT
* * * * *
22602 TTTCT-AAATTCTAAGTTCCTACCACAAATGA-AGCAAACATGGATTTTTGTAAAGATCTTCATT
259 TTTCTAAAATT-TAAGTTCTTACCTCAAATGAGA-CAAACATGGATTCTAGTAAGGATCTTCATT
** * ** * * *
22665 CATTTCGTGATTAGGCACAATAAACACATTCTTCTCATTAGGATAAATGATATTTATGGTTTTCT
322 CATTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCT
* * * * * * *
22730 TTTGTACGAAAATCTTTTCTTCACCTTATTTTTCGTAAAATCAAAGTTTATACTTTAAATGAGAC
387 TTTGCATGGAAATC-TTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGAC
22795 ATGCATTGATTCTCGTAAAAGTCC
451 ATGCATTGATTCTCGTAAAAGTCC
* * *
22819 CCAATCTTTCCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
*
22884 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACTGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
22949 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAACATAGCCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
* * *
23014 TCTCATAAGGATACATGATAGTGGTGCTTTGGTTTCGCAAGAAACACTTTCTTCTCATCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
23079 TCTAAATTTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
23144 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
*
23209 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
23274 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
*
23293 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * * *
23358 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * * *
23423 AAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
23488 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
23553 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
23617 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * *
23682 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAG--A--
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
23743 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
23764 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
23829 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
23894 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
23959 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
24024 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
*
24089 TCGTGATTAGGCATTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* *
24154 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
24219 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
*
24238 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * * *
24303 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * * *
24368 AAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
24433 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
24498 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
24562 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * * *
24627 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
24692 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
24713 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
24778 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
** * * *
24843 AATCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
24908 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
24973 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
25038 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* *
25103 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
25168 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
*
25187 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * *
25252 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * *
25317 AAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * * *
25382 TTCTCATTAGGATACATGATATTGATGCTTCGATTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
25447 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
25511 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * *
25576 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
25641 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
25662 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
25727 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
25792 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
25857 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
25922 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
25987 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
*
26052 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
26117 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
* *
26136 CCATTCTTTTCGAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * *
26201 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * * *
26266 AAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
26331 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
26396 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
26460 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * *
26525 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
26590 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
26611 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
*
26676 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATTAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
26741 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
26806 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
26871 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
*
26936 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTGTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* *
27001 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
27066 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
* *
27085 CCATTCTTTTCAAGAATGGGAACCAAAAGCACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * *
27150 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * *
27215 AAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
27280 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
27345 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
27409 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * *
27474 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
27539 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
27560 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
*
27625 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTATCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
27690 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
27755 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
27820 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
27885 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
*
27950 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
28015 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
*
28034 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * * *
28099 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTCATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * * *
28164 AAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
28229 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
28294 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
28358 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * * *
28423 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
28488 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
28509 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
28574 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
28639 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
28704 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
* *
28769 TCTAAAATTTAAGTTCTTACCTCAAATGAGATAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
28834 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* *
28899 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
28964 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
*
28983 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * *
29048 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * * *
29113 AAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
29178 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
29243 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
29307 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * *
29372 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
29437 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
29458 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
29523 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
29588 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
29653 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
29718 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
29783 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
*
29848 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
29913 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
*
29932 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * * *
29997 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTCATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * *
30062 AAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
30127 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
30192 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
30256 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * * *
30321 TGCGTGAAAATCTTTCTTTTCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
30386 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * * *
30407 TCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
30472 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
30537 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
30602 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
* *
30667 TCTAAAATTTAAGTTCTTACCTCAAATGAGATAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
30732 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* *
30797 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
30862 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
*
30881 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * *
30946 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * * *
31011 AAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
31076 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
31141 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
31205 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * *
31270 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
31335 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
31356 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
31421 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
31486 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
31551 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
31616 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
31681 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
*
31746 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
31811 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
*
31830 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * *
31895 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * * *
31960 AAGGCAAAGAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
32025 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * *
32090 TTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
32154 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * * *
32219 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAATTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
32284 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
32305 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
*
32370 TGGGGTCGTAAGAGAAACCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
32435 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
32500 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
32565 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
32630 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* *
32695 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGGGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
32760 TTGATTCTGGTAAGAGACC
456 TTGATTCTCGTAAAAGTCC
*
32779 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATGCT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * *
32844 TTGGGGTCGCAAGAGGAGCTTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * *
32909 AAGGCAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGTT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTC
* * * * * * * *
32974 TTCTCATTAGGATACATGATATTGATGCTTCGGTTTTGCAAGATACGCTTTCTTTCCACCTATTT
195 TTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTT
* * * * *
33039 CTGTAAAGTATAAGTTCATT-CCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
260 TTCTAAAATTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
33103 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTAATGGTTTTCTTT
324 TTTCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * *
33168 TGCGTGAAAATCTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACACG
389 TGCATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATG
33233 CATTGATTCTCGTAAAAGTCC
454 CATTGATTCTCGTAAAAGTCC
* * * *
33254 CCATTCCTTTCAAAAATGGCAACCAAAAACACCTTCCTTTCATTAGGATAAAGACATTAATGCTT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
*
33319 TGGGGTCGTAAGAAAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
66 TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
* * *
33384 AGGCAAACATGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATATAGTCT
131 AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
33449 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
196 TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
*
33514 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATT
261 TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
33579 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
326 TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
*
33644 CATGGAAATCTTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
391 CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* *
33709 TTGATTCTGGTAAGAGTCC
456 TTGATTCTCGTAAAAGTCC
* *
33728 CCATTCTTTTCAAGAATGGGAACCAAAAACACAATCCTTTCATTAGGATACAAGACATTAATACT
1 CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATTAATGCT
* * * *
33793 TTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCATTATTTATAGAATCAAAGTTTGTCTCTTAAAT
65 TTGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAAT
* * * * *
33858 AAGACAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGGTTAGGCACCATAAACATAGT
130 AAGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGT
33922 TGAAAGCTTA
Statistics
Matches: 10925, Mismatches: 1076, Indels: 103
0.90 0.09 0.01
Matches are distributed among these distances:
469 2 0.00
470 360 0.03
471 63 0.01
472 1 0.00
473 41 0.00
474 4805 0.44
475 5624 0.51
476 29 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (474 bp):
CCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATAAAGACATTAATGCTT
TGGGGTCGTAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATA
AGGCAAACAAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAGCATAAACATAGTCT
TCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT
TCTAAAATTTAAGTTCTTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
TCGTGATTAGGCACTGTAAACATATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
CATGGAAATCTTTCTTTACCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
TTGATTCTCGTAAAAGTCC
Found at i:37228 original size:13 final size:13
Alignment explanation
Indices: 37210--37234 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
37200 ATAATCCCCC
37210 TGTATCGATACAT
1 TGTATCGATACAT
37223 TGTATCGATACA
1 TGTATCGATACA
37235 AAGAATAATG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:43106 original size:32 final size:30
Alignment explanation
Indices: 43070--43128 Score: 75
Period size: 32 Copynumber: 1.9 Consensus size: 30
43060 GAAATCAAAT
43070 ACAAAGAGCT-TAGAAAAATAATAACAATATGA
1 ACAAA-AGCTCTAGAAAAAT-ATAA-AATATGA
*
43102 ACAAAAGCTCTTGAAAAATATAAAATA
1 ACAAAAGCTCTAGAAAAATATAAAATA
43129 CTTTGATCTT
Statistics
Matches: 25, Mismatches: 1, Indels: 4
0.83 0.03 0.13
Matches are distributed among these distances:
30 4 0.16
31 8 0.32
32 13 0.52
ACGTcount: A:0.59, C:0.10, G:0.10, T:0.20
Consensus pattern (30 bp):
ACAAAAGCTCTAGAAAAATATAAAATATGA
Found at i:43430 original size:13 final size:13
Alignment explanation
Indices: 43412--43437 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
43402 TTTTTTTTGG
43412 TGTATCGATACAT
1 TGTATCGATACAT
43425 TGTATCGATACAT
1 TGTATCGATACAT
43438 ACTTTGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:45076 original size:158 final size:157
Alignment explanation
Indices: 43906--45114 Score: 556
Period size: 158 Copynumber: 7.6 Consensus size: 157
43896 TTCTTACCTC
* * ** * * * **
43906 AAATGAGACAAACATGGATTCTAGTAAG-GATCTTCATTCATTTCATGAGTAGGCACTGTAAACA
1 AAATGAGACAAACATTGATTCTCGTAAGAG-TCCCCATTCTTTTCAAGATTAGGCACCATAAACA
* * * **
43970 TATTCCCCTCATCATGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTCTTTACCTT
65 TATTCCTCTCATCAGGATACATGATATTGATGCTTTGGTTTTGCATGGAAATCTTTCTTTACC-T
44035 ACTTTCCATAAAATCAAAGTTTGTACTTT
129 ACTTTCCATAAAATCAAAGTTTGTACTTT
** * * * *
44064 AAATGAGACATGCATTGATTCTGGTAAGAGTCCCCATTCTTTTCAAGAATGGGAACCA-AACACA
1 AAATGAGACAAACATTGATTCTCGTAAGAGTCCCCATTCTTTTCAAGATTAGGCACCATAA-ACA
* * * * * * * ** * * **
44128 CAATCCTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTT--CT
65 TATTCCTCTCATCAGGATACATGATATTGATGCTTTGGTTTTGCATG-GAAATCTTTCTTTACCT
* * *
44191 ACCGTT-AATGAAAGAATCAAAGTTTGT-TTCTT
129 A-CTTTCCAT--AA-AATCAAAGTTTGTACT-TT
* * * * ** * * * * * *
44223 AAATAAGACAAACA-AGAATACTCATACTAATTCCCTTTCTTTTTAGGGTTAGGCACCATAAACA
1 AAATGAGACAAACATTG-ATTCTCGTAAGAGTCCCCATTCTTTTCAAGATTAGGCACCATAAACA
* * * *
44287 TAGTT-TTCTCATTAGGATACATGATATTGATGCTTTGGTTTTGCA--AAACACGCTTTCTTTCC
65 TA-TTCCTCTCATCAGGATACATGATATTGATGCTTTGGTTTTGCATGGAA-A-TCTTTCTTT--
*** * ** * * *
44349 ACCTA-TTTTTGTAAAGT-ATAAGTTCATTCCTC
125 ACCTACTTTCCATAAAATCA-AAGTTTGTACTTT
* ** * ** * ** *
44381 AAAAGAGACAAACAAGGATTCTAGTAAG-GATCTTCATTCATTTCGTGATTAGGCACTATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAGAG-TCCCCATTCTTTTCAAGATTAGGCACCATAAACA
* * ** * * *
44445 TATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCGTGAAAATCTTTCTTTGCCTT
65 TATTCCTCTCATCAGGATACATGATATTGATGCTTTGGTTTTGCATGGAAATCTTTCTTTACC-T
*
44510 ATTTTCCATAAAATCAAAGTTTGTACTTT
129 ACTTTCCATAAAATCAAAGTTTGTACTTT
** * * * * *
44539 AAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATTCCTTTCAAAAAT-GGCAACCAAAAACA
1 AAATGAGACAAACATTGATTCTCGTAAGAGTCCCCATTCTTTTCAAGATTAGGC-ACCATAAACA
** * * * * * ** * * * **
44603 CCTTCCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTT--CT
65 TATTCCTCTCATCAGGATACATGATATTGATGCTTTGGTTTTGCATG-GAAATCTTTCTTTACCT
** *
44665 ACTGTTATTGATAGAATCAAAGTTTGTCAC-TT
129 AC--TT-TCCATAAAATCAAAGTTTGT-ACTTT
* * * * ** * * * * *
44697 AAATAAGGCAAACA-TGAATACTCATACTAATCCCCAATCTTTTCAGGATTAGGCAGCATAAATA
1 AAATGAGACAAACATTG-ATTCTCGTAAGAGTCCCCATTCTTTTCAAGATTAGGCACCATAAACA
* * * * * * * *
44761 TAGTCTTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCA-AGAAACACTTTCTTCCCAC
65 TATTCCTCTCATCAGGATACATGATATTGATGCTTTGGTTTTGCATGGAAA-TCTTTCTT--TAC
* * * * ** * *
44825 CAATTTTTC-TAAATTTTAAGTTCT-TACCTC
127 CTACTTTCCATAAAATCAAAGTT-TGTACTTT
* * * ** * ** **
44855 AAATGAGACAAATATGGATTCTAGTAAG-GATCTTCATTCATTTCGTGATTAGGCACTGTAAACA
1 AAATGAGACAAACATTGATTCTCGTAAGAG-TCCCCATTCTTTTCAAGATTAGGCACCATAAACA
* * **
44919 TATTCCCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTCTTTACCTT
65 TATTCCTCTCATCAGGATACATGATATTGATGCTTTGGTTTTGCATGGAAATCTTTCTTTACC-T
44984 ACTTTCCATAAAATCAAAGTTTGTACTTT
129 ACTTTCCATAAAATCAAAGTTTGTACTTT
** * * * * * *
45013 AAATGAGACATGCATTGATTCTGGTAAGAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACAC
1 AAATGAGACAAACATTGATTCTCGTAAGAGTCCCCATTCTTTTCAAGATTAGGCACCATAAACAT
* * * * * *
45078 AATCCTTTCATTAGGATACAAGACATTAATGCTTTGG
66 ATTCCTCTCATCAGGATACATGATATTGATGCTTTGG
45115 GGTCGCAAGA
Statistics
Matches: 739, Mismatches: 260, Indels: 104
0.67 0.24 0.09
Matches are distributed among these distances:
155 2 0.00
156 12 0.02
157 44 0.06
158 526 0.71
159 139 0.19
160 10 0.01
161 1 0.00
162 5 0.01
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.35
Consensus pattern (157 bp):
AAATGAGACAAACATTGATTCTCGTAAGAGTCCCCATTCTTTTCAAGATTAGGCACCATAAACAT
ATTCCTCTCATCAGGATACATGATATTGATGCTTTGGTTTTGCATGGAAATCTTTCTTTACCTAC
TTTCCATAAAATCAAAGTTTGTACTTT
Found at i:46035 original size:13 final size:13
Alignment explanation
Indices: 46017--46042 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
46007 TTTTTTTTGG
46017 TGTATCGATACAT
1 TGTATCGATACAT
46030 TGTATCGATACAT
1 TGTATCGATACAT
46043 ACTTTGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:47311 original size:475 final size:473
Alignment explanation
Indices: 46416--48508 Score: 3247
Period size: 475 Copynumber: 4.4 Consensus size: 473
46406 GATCCTAACA
* * * *
46416 ATAGTCTTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCAC
1 ATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCAC
* * * * *
46481 CAATTTCTCTAAATTTTAAGTTCTTTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
66 CAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* * * * * *
46546 ATTCATTTCGTGAGTAGGCACTGTAAACATATTCCCCTCATCATGATACATGATATTGATGGTTT
131 ATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTT
* *
46611 TCTTTTGCATGGAAATC-TTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTACTTTAAATGA
196 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGA
** * * *
46675 GACATGCATTGATTCTGGTAAGAGTCCCCATTCTTTTCAAGAATGGGAACCAAACACACAATCCT
261 GACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCT
46740 TTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATT
326 TTCATTAGGATA-AAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATT
* * *
46805 GAAAGAAGCAAAGTTTGTTTCTTAAATAAGACAAACAAGAATACTCATACTAATTCCCTTTTTTT
390 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAA-TCCCTTTTTTT
*
46870 TAGGGTTAGGCACCATAAAC
454 TAGGATTAGGCACCATAAAC
* * *
46890 ATAGTTTTCTCATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGATACGCTTTCTTTCCAC
1 ATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCAC
* * *
46955 CTATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACAAGGATTCTAGTAAGGATCTTC
66 CAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* *
47020 ATTTATTTCGTGCTTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGACT-GTT
131 ATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGA-TGGTT
*
47084 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCCTAAAATCAAAGTTTGTACTTTAAATG
195 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATG
* *
47149 AGACATGCATTGATTCTCATAAAAGTCCCTAATCTTTTCAAGAATGGGAACCAAAAACACATTCC
260 AGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCC
* *
47214 TTTCATTAGGATACAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTACCGTTAT
325 TTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTAT
*
47279 TGATAGAATCATAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCTTTTTT
389 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAAT-CCCTTTTTT
*
47344 TTCAAGATTAGGCACCATAAAC
453 TT-AGGATTAGGCACCATAAAC
*
47366 ATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATATGCTTTCTTCCCAC
1 ATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCAC
* * * * *
47431 CTATTTTTGTAAAGTATAAGTTCACTCCTCAAATGAGGCAAGCATGGATTCTAGTAAGGATCTCC
66 CAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* *
47496 ATTCATTTCGTGATTAGGCACTATAATCACGTTCTCCTCATCACGATACATGATATTGATGGTTT
131 ATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTT
* * * * *
47561 TCTTTTGCATGGAAATCTTTTATATGCCTTATTTTTCTTAAAATCAAAGCTTGTACTTTAAATGA
196 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGA
* * *
47626 GTCATGCATTGATTCTCGTAAAAGTCCCCATTCTTTTCCAGAATGGGAACCAAAAACACATTCCT
261 GACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCT
* * *
47691 TTCATTAAGATAAAGACATTAGTGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACCGTTATTG
326 TTCATTAGGATAAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTG
47756 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCTTTTCTTTT
391 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCC-TTT-TTTT
* *
47821 TAGGGTTAGGCACAATAAAC
454 TAGGATTAGGCACCATAAAC
* *
47841 ATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGTTACGCTTTCTTCCCAC
1 ATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCAC
* *
47906 CGATTTTTGTAAAGTATAAGTTCATTCCTCAAAAGAGACAAACATGGATTCTAGTAAGGATCTTC
66 CAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* *
47971 TTTCATTTCGTGATTAGGCCCTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTT
131 ATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTT
48036 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGA
196 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGA
* * *
48101 GACATGCATTGATTCTCATAAAAGTCCCCATTCCTTTCAAAAATGGGAAGCAAAAACACATTCCT
261 GACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCT
* *
48166 TTCATTAGGATAAAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCCACCGTTATTG
326 TTCATTAGGATAAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTG
* * * * *
48231 ATAGAATCAAAGTTTGTCACCTAAATAAGGCAAACATGAATACTCATACTAATCCCTAATCTTTT
391 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCT--TTTTTT
* *
48296 CAGGATTAGGCAGCATAAAC
454 TAGGATTAGGCACCATAAAC
* * *
48316 ATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCAC
1 ATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCAC
* * *
48381 CAATTTTTCTAAATTTTAAGTTC-TTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTT
66 CAATTTTTGTAAAGTATAAGTTCATT-CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTT
* * * * *
48445 CATTCATTTCGTGATTAGGCACTGTAAACAAATTCCCCTCATCAGGATACGTGATATTGATGGT
130 CATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGT
48509 GATGAAAACC
Statistics
Matches: 1482, Mismatches: 127, Indels: 19
0.91 0.08 0.01
Matches are distributed among these distances:
474 194 0.13
475 955 0.64
476 333 0.22
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.36
Consensus pattern (473 bp):
ATAGTTTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCAC
CAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
ATTCATTTCGTGATTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTT
TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATGA
GACATGCATTGATTCTCATAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAACACATTCCT
TTCATTAGGATAAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTG
ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCTTTTTTTTA
GGATTAGGCACCATAAAC
Found at i:47366 original size:159 final size:158
Alignment explanation
Indices: 46738--48364 Score: 392
Period size: 158 Copynumber: 10.3 Consensus size: 158
46728 ACACACAATC
*
46738 CTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTA
1 CTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACCGTTA
* * * *
46803 TTGAAAGAAGCAAAGTTTGTTTCTTAAATAAGACAAACAAGAATACTCATACTAATTCCCTTTTT
66 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCTTTTT
* * *
46868 TTT-AGGGTTAGGCACCATAAACATAGTT
131 TTTCAAGATTAGGCACCATAAACACA-TT
* * * ** * * * * *
46896 -TTCTCATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGATACGC-TTTCTTTCCACCTAT
1 CTT-TCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACC-GT
* * * * ***
46959 TTTTG-TA-AAGT-ATAAGTTCAT-TC-CTCAAA-AGAGACAAACAAGGATTCT-AGTAAGGATC
64 TATTGATAGAA-TCA-AAGTT--TGTCTCTTAAATA-AGACAAACAAGAATACTCA-TACTAATC
** * * ** * * *
47017 TTCATTTATTTCGTGCTTAGGCACTATAATCACATT
123 CCCTTTTTTTTCAAGATTAGGCACCATAAACACATT
* * * * * **** * * * *
47053 CTCCTCATCAGGATACATGATATTGACTG-TTTTCTTTTGCATG-GAAATCTTTTC-TT-TGCC-
1 CT-TTCATTAGGATACAAGACATT-AATGCTTTGGGGTCGCAAGAG-AAGCTTTTCTTTCTACCG
** * * ** * * *
47113 TTATTTTCCCTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCATA-AAAGT
63 TTA--TT-GATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-AGAATACTCATACTAA-T
* * * * * *
47175 -CCCTAATCTTTTCAAGAATGGGAACCAAAAACACATT
122 CCCCT-TTTTTTTCAAGATTAGGCACCATAAACACATT
*
47212 CCTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTACCGTT
1 -CTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACCGTT
*
47277 ATTGATAGAATCATAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCTTTT
65 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCTTTT
*
47342 TTTTCAAGATTAGGCACCATAAACATAGTT
130 TTTTCAAGATTAGGCACCATAAACACA-TT
* * * * ** * * * * *
47372 -TTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATATGC-TTTCTTCCCACCTAT
1 CTT-TCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACC-GT
* ** * * * * * * * *** *
47435 TTTTG-TA-AAGT-ATAAG-TTCACTCCTCAAATGAGGCAAGCATGGATTCT-AGTAAGGATCTC
64 TATTGATAGAA-TCA-AAGTTTGTCT-CTTAAATAAGACAAACAAGAATACTCA-TACTAATCCC
* ** ** * * *
47495 CATTCATTTCGTGATTAGGCACTATAATCACGTT
125 CTTTTTTTTCAAGATTAGGCACCATAAACACATT
* * * * * * * **** * * * * *
47529 CTCCTCATCACGATACATGATATTGATGGTTTTCTTTTGCATG-GAAATCTTTTATATGCCTTA-
1 CT-TTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAG-AAGCTTTTCT-T-TC-TAC
* ** * * * * ** * * * *
47592 --TTTTTCTTAAAATCAAAGCTTGTACT-TTAAATGAGTCATGCATTG-ATTCTCGTA-AAAGTC
61 CGTTATTGATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-AGAATACTCATACTAA-TC
* * * * * * *
47652 CCCATTCTTTTCCAGAATGGGAACCAAAAACACATT
123 CCCTTTTTTTTCAAGATTAGGCACCATAAACACATT
* *
47688 CCTTTCATTAAGATA-AAGACATTAGTGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACCGTT
1 -CTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACCGTT
47752 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAAT-CCCTTTT
65 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCTTTT
* * * * *
47816 CTTTTTAGGGTTAGGCACAATAAACATAGTT
130 -TTTTCAAGATTAGGCACCATAAACACA-TT
* * * * ** * ** * * *
47847 -TTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGTTACGC-TTTCTTCCCACCGAT
1 CTT-TCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACCG-T
* * * * * ***
47910 TTTTG-TA-AAGT-ATAAGTTCAT-TC-CTCAAA-AGAGACAAACATGGATTCT-AGTAAGGATC
64 TATTGATAGAA-TCA-AAGTT--TGTCTCTTAAATA-AGACAAACAAGAATACTCA-TACTAATC
** ** ** *
47968 TTCTTTCATTTCGTGATTAGGC-CCTATAATCACATT
123 CCCTTTTTTTTCAAGATTAGGCACC-ATAAACACATT
* * * * * * **** * * * *
48004 CTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATG-GAAATCTTTTC-TT-TGCC-T
1 CT-TTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAG-AAGCTTTTCTTTCTACCGT
* * * ** * * *
48065 TATTTTCCATAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCATA-AAAGTC
64 TA--TT-GATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-AGAATACTCATACTAA-TC
* ** * * * * * *
48127 CCCATTCCTTTCAAAAATGGGAAGCAAAAACACATT
123 CCCTTTTTTTTCAAGATTAGGCACCATAAACACATT
* * *
48163 CCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCGTAAGAGAAGCCTTTCTTTCCACCGTT
1 -CTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACCGTT
* * * * *
48227 ATTGATAGAATCAAAGTTTGTCACCTAAATAAGGCAAACATGAATACTCATACTAAT-CCCTAAT
65 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCT-TT
* * * * *
48291 CTTTTCAGGATTAGGCAGCATAAACATAGT
129 TTTTTCAAGATTAGGCACCATAAACACATT
* * * * **
48321 CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
1 CTT-TCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGA
48365 AACACTTTCT
Statistics
Matches: 1039, Mismatches: 320, Indels: 219
0.66 0.20 0.14
Matches are distributed among these distances:
155 6 0.01
156 6 0.01
157 100 0.10
158 486 0.47
159 385 0.37
160 42 0.04
161 10 0.01
162 4 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (158 bp):
CTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACCGTTA
TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCTTTTT
TTTCAAGATTAGGCACCATAAACACATT
Found at i:50144 original size:12 final size:11
Alignment explanation
Indices: 50126--50200 Score: 68
Period size: 12 Copynumber: 6.8 Consensus size: 11
50116 GAGAAAGAAA
50126 AGATAGGAGGG
1 AGATAGGAGGG
50137 ATGATAGGAGGAG
1 A-GATAGGAGG-G
50150 AGATAGGA--G
1 AGATAGGAGGG
*
50159 AGATAGTA--G
1 AGATAGGAGGG
50168 AGATAGGAGGG
1 AGATAGGAGGG
*
50179 ATGATAGGAGGAA
1 A-GATAGGAGG-G
50192 AGATAGGAG
1 AGATAGGAG
50201 AGATAATAGA
Statistics
Matches: 55, Mismatches: 3, Indels: 11
0.80 0.04 0.16
Matches are distributed among these distances:
9 16 0.29
11 3 0.05
12 33 0.60
13 3 0.05
ACGTcount: A:0.41, C:0.00, G:0.45, T:0.13
Consensus pattern (11 bp):
AGATAGGAGGG
Found at i:50170 original size:11 final size:9
Alignment explanation
Indices: 50145--50205 Score: 59
Period size: 9 Copynumber: 6.1 Consensus size: 9
50135 GGATGATAGG
50145 AGGAGAGAT
1 AGGAGAGAT
50154 AGGAGAGAT
1 AGGAGAGAT
*
50163 AGTAGAGAT
1 AGGAGAGAT
50172 AGGAGGGATGAT
1 AGGA--GA-GAT
50184 AGGAGGAAAGAT
1 AGGA-G--AGAT
50196 AGGAGAGAT
1 AGGAGAGAT
50205 A
1 A
50206 ATAGAGAGAG
Statistics
Matches: 45, Mismatches: 2, Indels: 10
0.79 0.04 0.18
Matches are distributed among these distances:
9 25 0.56
11 5 0.11
12 14 0.31
13 1 0.02
ACGTcount: A:0.44, C:0.00, G:0.43, T:0.13
Consensus pattern (9 bp):
AGGAGAGAT
Found at i:50174 original size:42 final size:42
Alignment explanation
Indices: 50126--50229 Score: 172
Period size: 42 Copynumber: 2.5 Consensus size: 42
50116 GAGAAAGAAA
* *
50126 AGATAGGAGGGATGATAGGAGGAGAGATAGGAGAGATAGTAG
1 AGATAGGAGGGATGATAGGAGGAAAGATAGGAGAGATAATAG
50168 AGATAGGAGGGATGATAGGAGGAAAGATAGGAGAGATAATAG
1 AGATAGGAGGGATGATAGGAGGAAAGATAGGAGAGATAATAG
* *
50210 AGAGAGGAGGGATGACAGGA
1 AGATAGGAGGGATGATAGGA
50230 CGAGGAGAGA
Statistics
Matches: 58, Mismatches: 4, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
42 58 1.00
ACGTcount: A:0.42, C:0.01, G:0.44, T:0.12
Consensus pattern (42 bp):
AGATAGGAGGGATGATAGGAGGAAAGATAGGAGAGATAATAG
Found at i:55506 original size:159 final size:159
Alignment explanation
Indices: 55327--57398 Score: 460
Period size: 158 Copynumber: 13.1 Consensus size: 159
55317 TCCTTGCATT
* * *
55327 AGGATACAAGACATTAATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGA
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGA
* * *
55392 ATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAGGG
66 ATCAAAGTTTGTCTCTCAAATAAGACAAACAAGAATACTCATACTAATCCCCATTCTTTTTAGGA
*
55457 TTAGGCACCATAAACATAGTT-TTCTCATA
131 TTAGGCACCATAAACACA-TTCTTCTCATA
** * * * * * *
55486 AGGATACATGATATTGATGCTTTGGTTTTGCAAGATACG-TTTTCTTTCCACCTATTTTTG-TA-
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTCTACC-GTTATTGATAG
** * * * * *** ** *
55548 AAGTGTAAGTTCAT-TC-CGCAAA-AGAGACAAACATGGATTCT-AGTAAGGATCTTCATTC-AT
65 AA-TCAAAGTT--TGTCTCTCAAATA-AGACAAACAAGAATACTCA-TACTAATCCCCATTCTTT
* * * * *
55608 TTCGTGATTAGGCACTATAATCACATTCTCCTCATC
125 TTAG-GATTAGGCACCATAAACACATTCTTCTCATA
* **** * ** * *
55644 AGGATACATGATATTGATGGTTTTCTTTTGCATG-GAAATCTTT-TCTT-TGCC-TTATTTTCCA
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCT-TTCTACCGTTA--TT-GA
* * ** * * * *
55705 TAAAATCAAAGTTTGTACT-TCAAATGAGACATGCATTG-ATTCTCATA-AAAGTCCCCAATCTT
62 TAGAATCAAAGTTTGT-CTCTCAAATAAGACAAACA-AGAATACTCATACTAA-TCCCCATTCTT
** * * * *
55767 GATAAGATTAGGAACCAAAAACACATTCCTT-TCATT
124 TTTAGGATTAGGCACCATAAACACATT-CTTCTCATA
* * * ** * *
55803 AGGATACAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCTACCGTTATGGATAGA
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGA
* * * *
55868 ATCAAAGTTTGTTTCTTAAATAAGACAAACAAGAATACTTATACTAATCCCTC-TTCTTTTCAGG
66 ATCAAAGTTTGTCTCTCAAATAAGACAAACAAGAATACTCATACTAATCCC-CATTCTTTTTAGG
* *
55932 ATTAGGCACCATAAACATAGTT-TTCTTATA
130 ATTAGGCACCATAAACACA-TTCTTCTCATA
* * * * * * *
55962 AGGATACATGATATTGATGCTTT-GGTTTCGCAAGATACG-CTTTCTTCCCACCTATTTTTG-TA
1 AGGATACATGATATTGATGCTTTGGGGTT-GCAAGAGAAGCCTTTCTTTCTACC-GTTATTGATA
* * * * * **
56024 -AAGT-ATAAGTTCAT-TC-CTCAAATGAGACAAACATGGAT--T-ATAGTAAGGACCTTAATTC
64 GAA-TCA-AAGTT--TGTCTCTCAAATAAGACAAACAAGAATACTCATACTAA--TCC-CCATTC
** * * * * *
56082 -AATTCGTGATTAGGCACTATAAACACATTCTCCTTATC
122 TTTTTAG-GATTAGGCACCATAAACACATTCTTCTCATA
**** ** * *
56120 AGGATACATGATATTGATAG-TTTTCTTTTGCAAG-GAAATCTTT-TCTT-TGCC-TTATTTTCC
1 AGGATACATGATATTGAT-GCTTTGGGGTTGCAAGAGAAGCCTTTCT-TTCTACCGTTA--TT-G
* * * * * * ** * * * *
56180 TTAAAATCAAAGCTTGTACT-TTAAATGAGTCATGCATTG-ATTCTCGTA--AACGTCCCTATT-
61 ATAGAATCAAAGTTTGT-CTCTCAAATAAGACAAACA-AGAATACTCATACTAA--TCCCCATTC
** * * * * * *
56240 TTTTTCAACAATGGGTACCAAAAACACATTCTTTTCATT
122 TTTTT-AGGATTAGGCACCATAAACACATTCTTCTCATA
* * ** * * *
56279 AGGATA-AAGACATCAATGCTTTGGGGTCGCCAGAGAAGCTTTTCTTTCTACCGTTATTGATAGA
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGA
* * * * * * * *
56343 ATCAAAGTTTGTCTCTTAAATAAAATAAACATGAATACTCAAACTAATCCCCTTTCTTTTTGGGG
66 ATCAAAGTTTGTCTCTCAAATAAGACAAACAAGAATACTCATACTAATCCCCATTCTTTTTAGGA
* * * *
56408 TTAGGAACCATAAACA-TTGTTTTCTAATA
131 TTAGGCACCATAAACACAT-TCTTCTCATA
*** * * * * *
56437 AGGATACATGATATTGATGCTTTGATTTTGCAAGATACG-CTTTATTTGC-ACCTATTTTTG-TA
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTT-CTACC-GTTATTGATA
* * * * **
56499 -AAGT-ATAAGTTCAT-TC-CTCAAATGAGACAAACATGGAT--T-ATAGTAAGGATCTTCATTC
64 GAA-TCA-AAGTT--TGTCTCTCAAATAAGACAAACAAGAATACTCATACT-A--ATCCCCATTC
* * * * * * *
56557 -ATTTCGTGATTAGGCACTATAATCACGTTCTCCTCATC
122 TTTTTAG-GATTAGGCACCATAAACACATTCTTCTCATA
** * **** * ** * **
56595 ATAATACATGATATTGATGGTTTTCTTTTGCATG-GAAATCTTT-TCTT-TGCC-TTATTTTCCT
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCT-TTCTACCGTTA--TT-GA
* * * * * ** * * * *
56656 TAAAATCAAAGCTTGTACT-TTAAATGAGTCATGC-AGTGATTCTCGTA-AAAGTCCCCATTCTT
62 TAGAATCAAAGTTTGT-CTCTCAAATAAGACAAACAAG-AATACTCATACTAA-TCCCCATTCTT
* * * * * * *
56718 TTCAAGAATGGGAACCAAAAACACATTCCTT-TCATT
124 TTTAGGATTAGGCACCATAAACACATT-CTTCTCATA
* * ** * * *
56754 AGGATA-AAGACATT-AGTGCTTTGGGGTCACAAGAGAAGCTTTTTCCTTCAACCGTTATTGATA
1 AGGATACATGATATTGA-TGCTTTGGGGTTGCAAGAGAAGC-CTTTCTTTCTACCGTTATTGATA
* * * *
56817 CAATCAAAGTTTGTCTTTTAAATAAGACAAACAAGAATACTCATACTAATCCCCTTTCTTTTTAG
64 GAATCAAAGTTTGTCTCTCAAATAAGACAAACAAGAATACTCATACTAATCCCCATTCTTTTTAG
* *
56882 GGTTAGGCACCATAAACATAGTT-TTCTCATA
129 GATTAGGCACCATAAACACA-TTCTTCTCATA
** * * * * * *
56913 AGGATACATGATATTGATGCTTTGGTTTTGCAAGATACG-TTTTCTTCCCACCGATTTTTG-TA-
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTCTACCG-TTATTGATAG
* * * *** ** *
56975 AAGT-ATAAGTTCAT-TC-CTCAAA-ATAGACAAACACGGATTCT-AGTAAGGATCTTCATTCAT
65 AA-TCA-AAGTT--TGTCTCTCAAATA-AGACAAACAAGAATACTCA-TACTAATCCCCATTCTT
* * *
57035 TTT-GTGATTAGGC-CCTATAATCACATTCTCCTCATC
124 TTTAG-GATTAGGCACC-ATAAACACATTCTTCTCATA
* **** * ** * *
57071 AGGATACATGATATTGATGGTTTCCTTTTGCATG-GAAATCTTT-TCTT-TGCC-TTATTTTCCA
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCT-TTCTACCGTTA--TT-GA
* * * ** * * * *
57132 TAAAATCCAAA-TTTGTACT-TTAAATGAGACATGCACTG-ATTCTCATA-AAAGTTCCCATTCT
62 TAGAAT-CAAAGTTTGT-CTCTCAAATAAGACAAACA-AGAATACTCATACTAA-TCCCCATTCT
* * * * * * *
57193 TTTCAAGAATGGGAACCAAAAACACATTCCTT-TCATT
123 TTTTAGGATTAGGCACCATAAACACATT-CTTCTCATA
* * * *
57230 AGGATA-AAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGA
1 AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGA
* * * * * * * * *
57294 ATCAAAGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAATCCCCAATCCTTTCATGT
66 ATCAAAGTTTGTCTCTCAAATAAGACAAACAAGAATACTCATACTAATCCCCATTCTTTTTAGGA
* * *
57359 TTAGGCAGCACAAACATATTCTTCTCATA
131 TTAGGCACCATAAACACATTCTTCTCATA
**
57388 TTGATACATGA
1 AGGATACATGA
57399 GGACACACGG
Statistics
Matches: 1334, Mismatches: 420, Indels: 318
0.64 0.20 0.15
Matches are distributed among these distances:
155 17 0.01
156 3 0.00
157 81 0.06
158 588 0.44
159 520 0.39
160 99 0.07
161 16 0.01
162 10 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (159 bp):
AGGATACATGATATTGATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTCTACCGTTATTGATAGA
ATCAAAGTTTGTCTCTCAAATAAGACAAACAAGAATACTCATACTAATCCCCATTCTTTTTAGGA
TTAGGCACCATAAACACATTCTTCTCATA
Found at i:55622 original size:158 final size:157
Alignment explanation
Indices: 55457--57089 Score: 486
Period size: 159 Copynumber: 10.3 Consensus size: 157
55447 CTTTTTAGGG
* *
55457 TTAGGCACCATAAACATAGTT-TTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
1 TTAGGCACCATAAACACA-TTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
** *
55521 TACGTTTTCTTTCCACCTATTTTTGTAAAGTGTAAGTTCATTCCGCAAAAGAGACAAACATGGAT
65 TACGTTTTCTTTCCACCTATTTTTGTAAAGTCAAAGTTCATTCCTCAAAAGAGACAAACATGGAT
* *
55586 TCTAGTAAGGATCTTCATTCATTTCGTGA
130 TCTA-TAAGAATCCTCATTCATTTCGTGA
* * * * * ** * *
55615 TTAGGCACTATAATCACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGA
1 TTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCA-AGA
* * * ** * ** * * * ** *
55680 AATC-TTTTCTTTGC-CTTATTTTCCATAAAATCAAAGTTTGTACTTCAAATGAGACATGCATTG
65 TA-CGTTTTCTTTCCACCTATTTT-TGTAAAGTCAAAGTTCATTCCTCAAAAGAGACAAACATGG
* *
55743 ATTCTCATAA-AAGTCCCCAATC--TT-GATAAGA
128 ATTCT-ATAAGAA-TCCTCATTCATTTCG-T--GA
* * * * * * ** *
55774 TTAGGAACCAAAAACACATTCCTT-TCATTAGGATACAAGACATTAATGCTTTGGGGTCACAAGA
1 TTAGGCACCATAAACACATT-CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * * * ** * * *
55838 GAAGCTTTTCTTTCTACC-GTTATGGATAGAA-TCAAAGTTTGTTTCTTAAATA-AGACAAACAA
65 TACG-TTTTCTTTCCACCTATTTTTG-TA-AAGTCAAAGTTCATTCCTCAAA-AGAGACAAACAT
* * ** *
55900 GAATACTTATACTAATCCCTC-TTCTTTTCAG-GA
126 GGATTC-TATAAGAAT-CCTCATTCATTTC-GTGA
* *
55933 TTAGGCACCATAAACATAGTT-TTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
1 TTAGGCACCATAAACACA-TTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * *
55997 TACGCTTTCTTCCCACCTATTTTTGTAAAGT-ATAAGTTCATTCCTCAAATGAGACAAACATGGA
65 TACGTTTTCTTTCCACCTATTTTTGTAAAGTCA-AAGTTCATTCCTCAAAAGAGACAAACATGGA
* * * *
56061 TTATAGTAAGGA-CCTTAATTCAATTCGTGA
129 TTCTA-TAAGAATCC-TCATTCATTTCGTGA
* * * * ** *
56091 TTAGGCACTATAAACACATTCTCCTTATCAGGATACATGATATTGATAG-TTTTCTTTTGCAAGG
1 TTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGAT-GCTTTGGTTTCGCAA-G
* * * * * * * * * * **
56155 AAATC-TTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGCTT-GTACTTTAAATGAGTCATGCA
64 ATA-CGTTTTCTTTCCACCTATTTT--TGTAAAGTCAAAG-TTCATTCCTCAAAAGAGACAAACA
* * * ** ***
56216 TTGATTCTCGTAA-ACGTCC-CTATTTTTTTCAACA
125 TGGATTCT-ATAAGA-ATCCTC-ATTCATTTCGTGA
* * * * * * * * ** ** * *
56250 ATGGGTACCAAAAACACATTCTTTTCATTAGGATA-AAGACATCAATGCTTTGGGGTCGCCAGAG
1 TTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* * * * * * *
56314 AAGCTTTTCTTTCTACC-GTTATTGATAGAA-TCAAAGTT--TGTCTCTTAAATA-AAATAAACA
66 ACG-TTTTCTTTCCACCTATTTTTG-TA-AAGTCAAAGTTCAT-TC-CTCAAA-AGAGACAAACA
* * * * * * * * *
56374 TGAATACTCA-AACTAATCCCCTTTCTTTTTGGGG
125 TGGATTCT-ATAA-GAATCCTCATTCATTTCGTGA
* * * * * *
56408 TTAGGAACCATAAACA-TTGTTTTCTAATAAGGATACATGATATTGATGCTTTGATTTTGCAAGA
1 TTAGGCACCATAAACACAT-TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * *
56472 TACGCTTTATTTGCACCTATTTTTGTAAAGT-ATAAGTTCATTCCTCAAATGAGACAAACATGGA
65 TACGTTTTCTTTCCACCTATTTTTGTAAAGTCA-AAGTTCATTCCTCAAAAGAGACAAACATGGA
* * *
56536 TTATAGTAAGGATCTTCATTCATTTCGTGA
129 TTCTA-TAAGAATCCTCATTCATTTCGTGA
* * * * * ** * ** * *
56566 TTAGGCACTATAATCACGTTCTCCTCATCATAATACATGATATTGATGGTTTTCTTTTGCATGGA
1 TTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCA-AGA
* * * * * * * * * * **
56631 AATC-TTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGCTT-GTACTTTAAATGAGTCATGCA-
65 TA-CGTTTTCTTTCCACCTATTTT--TGTAAAGTCAAAG-TTCATTCCTCAAAAGAGACAAACAT
* * * **
56691 GTGATTCTCGTAA-AAGTCCCCATTCTTTTCAAGA
126 G-GATTCT-ATAAGAA-TCCTCATTCATTTCGTGA
* * * * * * * ** *
56725 ATGGGAACCAAAAACACATTCCTT-TCATTAGGATA-AAGACATT-AGTGCTTTGGGGTCACAAG
1 TTAGGCACCATAAACACATT-CTTCTCATAAGGATACATGATATTGA-TGCTTTGGTTTCGCAAG
* * * * * * * *
56787 AGAAGCTTTTTCCTTCAACC-GTTATTGATACAA-TCAAAGTT--TGTCTTTTAAATA-AGACAA
64 A-TA-CGTTTTCTTTCCACCTATTTTTG-TA-AAGTCAAAGTTCAT-TC-CTCAAA-AGAGACAA
* * * ** * * * * *
56847 ACAAGAATACTCATACTAATCCCCTTTCTTTTTAG-GG
122 ACATGGATTCT-ATAAGAATCCTCATTC-ATTTCGTGA
* *
56884 TTAGGCACCATAAACATAGTT-TTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
1 TTAGGCACCATAAACACA-TTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * *
56948 TACGTTTTCTTCCCACCGATTTTTGTAAAGT-ATAAGTTCATTCCTCAAAATAGACAAACACGGA
65 TACGTTTTCTTTCCACCTATTTTTGTAAAGTCA-AAGTTCATTCCTCAAAAGAGACAAACATGGA
* * *
57012 TTCTAGTAAGGATCTTCATTCATTTTGTGA
129 TTCTA-TAAGAATCCTCATTCATTTCGTGA
* * *
57042 TTAGGC-CCTATAATCACATTCTCCTCATCAGGATACATGATATTGATG
1 TTAGGCACC-ATAAACACATTCTTCTCATAAGGATACATGATATTGATG
57090 GTTTCCTTTT
Statistics
Matches: 1033, Mismatches: 336, Indels: 212
0.65 0.21 0.13
Matches are distributed among these distances:
156 5 0.00
157 46 0.04
158 457 0.44
159 458 0.44
160 63 0.06
161 3 0.00
163 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (157 bp):
TTAGGCACCATAAACACATTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
ACGTTTTCTTTCCACCTATTTTTGTAAAGTCAAAGTTCATTCCTCAAAAGAGACAAACATGGATT
CTATAAGAATCCTCATTCATTTCGTGA
Found at i:56516 original size:475 final size:476
Alignment explanation
Indices: 55184--71354 Score: 26983
Period size: 476 Copynumber: 34.0 Consensus size: 476
55174 GTTGTCATCA
* * * * * * * *
55184 GATGGTTTTCTTTTGCATGGAAATC-TTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTA-C
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTG-ACC
* * * * * * * *
55247 CTTAAATGAGACATGCATTGATTCTCGTAAGAGTCCCCATTCTTTTCAAGAATGAGAACTGAAAA
65 CTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAA
* * * * ** *
55312 CACAAT-CCTTGCATTAGGATACAAGACATTAATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTC
130 TACAATCCCTT-CATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC-TTC
* *
55376 TACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATC
193 TTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT-
* * * * * * * *
55441 CCCT-TTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATG
257 CCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATG
* ** ** * * * * * * *
55505 CTTTGGTTTTGCAAGATACGTTTTCTTTCCACCTATTTTTGTAAAGT-GTAAGTTCATTCCGCAA
322 CTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAA
* * ** * * * * *
55569 AAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACAT
387 AAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACAT
* * * ** * *
55634 TCTCCTCATCAGGATACATGATATT
452 TATCCTCTTTAGGGCAAATGTTATT
* * * * * *
55659 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTA--
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTG-ACC
* * * * * * * *
55722 CTTCAAATGAGACATGCATTGATTCTCATAAAAGTCCCCAATCTTGAT-AAGATTAGGAACCAAA
65 CTT-AAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTT-TTCAAGATTGGGAACCGAA
* * * * * *
55786 AACACATTCCTTTCATTAGGATACAAGACATTAATGCTTTGGGGTCACAAGAGAAGCTTTTCTTT
128 AATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC-TT
* * * * *
55851 CTACCGTTATGGATAGAATCAAAGTTTGTTTCTTAAATAAGACAAACAAGAATACTTATACTAAT
192 CTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * ** * *
55916 CCCTCTTC-TTTTCAGGATTAGGCACCATAAACATAGTTTTCTTATAAGGATACATGATATTGAT
257 CCCTATTCATTTT-AGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAT
* * * * * * * * * *
55980 GCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGT-ATAAGTTCATTCCTCA
321 GCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCA
* * ** ** * * * ** * *
56044 AATGAGACAAACATGGATTATAGTAAGGACCTTAATTCAATTCGTGATTAGGCACTATAAACACA
386 AAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACA
* * ** * *
56109 TTCTCCT-TATCAGGATACATGATATT
451 TTATCCTCT-TTAGGGCAAATGTTATT
* * * * * * * *
56135 GATAGTTTTCTTTTGCAAGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTA-C
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTG-ACC
* * * * * * * * * *
56199 TTTAAATGAGTCATGCATTGATTCTCGTAA-ACGTC-CCTATTTTTTTCAACAATGGGTACCAAA
65 CTTAAATAAGACAAGCATTGATTCTCGTAACA-GTCTCC-AATCTTTTCAAGATTGGGAACCGAA
* * ** * ** * * *
56262 AACACATTCTTTTCATTAGGATA-AAGACATCAATGCTTTGGGGTCGCCAGAGAAGCTTTTCTTT
128 AATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC-TT
* * * *
56326 CTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAAATAAACATGAATACTCAAACTAAT
192 CTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * * ** * ** * *
56391 CCCCT-TTCTTTTTGGGGTTAGGAACCATAAACATTGTTTTCTAATAAGGATACATGATATTGAT
257 -CCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAT
* * * * *** * * * * * *
56455 GCTTTGATTTTGCAAGATACGCTTTATTTGCACCTATTTTTGTAAAGT-ATAAGTTCATTCCTCA
321 GCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCA
* * ** ** * * * * * *
56519 AATGAGACAAACATGGATTATAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACG
386 AAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACA
* * * **** * *
56584 TTCTCCTCATCATAATACATGATATT
451 TTATCCTCTTTAGGGCAAATGTTATT
* * * * * *
56610 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTA-C
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTG-ACC
* * * * * * * * * *
56674 TTTAAATGAGTCATGCAGTGATTCTCGTAAAAGTCCCCATTCTTTTCAAGAATGGGAACCAAAAA
65 CTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAA
* * * * *
56739 CACATTCCTTTCATTAGGATA-AAGACATT-AGTGCTTTGGGGTCACAAGAGAAGCTTTTTCCTT
130 TACAATCCCTTCATTAGGATACATGACATTGA-TGCTTTGGTGTCACAAGAGAAGC-TTTT-CTT
** * * *
56802 CAACCGTTATTGATACAATCAAAGTTTGTCTTTTAAATAAGACAAACAAGAATACTCATACTAAT
192 CTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * * * * *
56867 CCCCT-TTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGAT
257 -CCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAT
* ** * * * * * * *
56931 GCTTTGGTTTTGCAAGATACGTTTTCTTCCCACCGATTTTTGTAAAGT-ATAAGTTCATTCCTCA
321 GCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCA
* * * ** * * * * *
56995 AAATAGACAAACACGGATTCTAGTAAGGATCTTCATTCATTTTGTGATTAGGCCCTATAATCACA
386 AAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACA
* * * ** * *
57060 TTCTCCTCATCAGGATACATGATATT
451 TTATCCTCTTTAGGGCAAATGTTATT
* * * * * * *
57086 GATGGTTTCCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCCAA-ATTTGTA-
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAAT-CAACGTTTG-AC
* * * * * * * * *
57149 CTTTAAATGAGACATGCACTGATTCTCATAAAAGT-TCCCATTCTTTTCAAGAATGGGAACCAAA
64 CCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCT-CCAATCTTTTCAAGATTGGGAACCGAA
* * * * * * * *
57213 AACACATTCCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTT
128 AATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC-TT
* * *
57277 CTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAAT
192 CTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * * * * * *
57342 CCCCAATCCTTTCATGTTTAGGCAGCACAAACATATTCTTCTCATATTGATACATGAGGACACAC
257 CCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTC-----G-T--A--AGGACACAC
* * * * * *
57407 GGTATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACCAATTTTTTTAAAGTC-TAAGTT
312 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTG
* * *
57471 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAACGATCTTCATTCGTTTTGAGATTAGGTAGT
377 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACT
*
57536 ATAAACACATTATCCTCTTTAGGGTAAATGTTATT
442 ATAAACACATTATCCTCTTTAGGGCAAATGTTATT
*
57571 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* **
57636 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATG-TTCGAAAACCGAAAA
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATT-GGGAACCGAAAA
57700 TACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
130 TACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
*
57765 CCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
*
57830 TATCCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
260 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
*
57895 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAA
325 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAG
57959 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTAT
390 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTAT
* *
58023 CCTCTTTAGGGTAAATGTAATT
455 CCTCTTTAGGGCAAATGTTATT
58045 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
58110 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
58175 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTT
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
* * *
58240 CGTTATTGATAGAATCAAAGTTTGTCGCCTAAATAAGACAAACATGAATACTCAAACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
58305 ATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGGTGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
58370 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
58435 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
58500 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
58521 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
58586 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
58651 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
58716 CGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
58781 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAAGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
*
58846 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGTGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
58911 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
58975 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
58996 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
59061 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTAGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* * *
59126 ACAATCCCTTCAATAGGAAAAATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
59191 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
59256 ATTCATTTTAGGATTAGGCACCCCAAACACAGACTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
59321 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
59386 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
59451 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
59472 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* **
59537 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATG-TTCGAAAACCGAAAA
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATT-GGGAACCGAAAA
59601 TACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
130 TACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
*
59666 CCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
59731 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
260 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
59796 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAG
325 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAG
59861 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTAT
390 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTAT
*
59926 CCTCTTTAGGGTAAATGTTATT
455 CCTCTTTAGGGCAAATGTTATT
*
59948 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCCTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
60013 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAGCCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
60078 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
60143 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAACCATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
60208 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
60273 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
60338 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTCTAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
60403 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
60424 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
60489 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTAGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* * *
60554 ACCATCCCTTCAATAGGATACATGACATTGATGCTTTGATGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
60619 CGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
60684 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
*
60749 GGTTTTTCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* *
60814 GACAAATAATGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
60879 CTCTTTAGGGCAAATGCTATT
456 CTCTTTAGGGCAAATGTTATT
60900 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
60965 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
61030 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCATTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
61095 CGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
61160 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
61225 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
61290 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
61354 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
61375 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
61440 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
61505 ACAATCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
61570 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAAGAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
61635 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
61700 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* * *
61765 GACAAACAAGGATTCAAACAATGATCTTCATTCGTTTTGAGA-TAGGAACGATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
61829 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
61850 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
61915 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
61980 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCATTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
62045 CGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
62110 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
62175 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
62240 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
62304 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
62325 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
62390 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTAGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* * *
62455 ACAATCCCTTCAATAGGAAAAATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
62520 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
62585 ATTCATTTTAGGATTAGGCACCCCAAACACAGACTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
62650 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
62715 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
62780 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
62801 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* **
62866 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATG-TTCGAAAACCGAAAA
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATT-GGGAACCGAAAA
62930 TACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
130 TACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
*
62995 CCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
63060 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
260 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
*
63125 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAA
325 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAG
63189 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTAT
390 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTAT
* *
63253 CCTCTTTAGGGTAAATGTAATT
455 CCTCTTTAGGGCAAATGTTATT
*
63275 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCCTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* *
63340 TTAAATAAGACAAGCATTTATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAGCCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
63405 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
63470 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
63535 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
63600 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
63665 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
63730 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
63751 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
63816 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTAGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* * *
63881 ACCATCCCTTCAATAGGATACATGACATTGATGCTTTGATGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
63946 CGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
64011 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
*
64076 GGTTTTTCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* *
64141 GACAAATAATGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
64206 CTCTTTAGGGCAAATGCTATT
456 CTCTTTAGGGCAAATGTTATT
64227 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
64292 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
64357 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCATTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
64422 CGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
64487 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
64552 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
64617 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
64681 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
64702 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
64767 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
64832 ACAATCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
64897 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAAGAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
64962 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
65027 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* * *
65092 GACAAACAAGGATTCAAACAATGATCTTCATTCGTTTTGAGA-TAGGAACGATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
65156 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
65177 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
65242 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
65307 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCATTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
* *
65372 CGTTACTGATAGAATCAAAGGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
65437 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
65502 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
65567 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
65631 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
65652 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
65717 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* *
65782 ACAATCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGAGAAGCATTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
65847 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAACAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
65912 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGATTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
*
65977 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGACTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* *
66041 GACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
66105 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
*
66126 GATGGTTTTCTTTGGCATGGAAAACTTTTGTTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
66191 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66256 ACAATCCCTT-ATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
66320 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAAGAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
66385 ATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
66450 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* *
66515 GACAAACAAGGATTCAAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
66579 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
66600 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* * *
66665 TTAAATAGGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTAGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* *
66730 ACCATCCCTTCAATAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
66795 CGTTATTGATAGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
66860 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTCCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
66925 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
66989 GACAAACAAGGATTCGAACAATGATCTTCATTTGTTTTGAGA-TAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
* *
67053 CTCGTTAGGGTAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
*
67074 GATGGTTTTCATTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
67139 TTAAATAAGACAAGTATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
67204 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTT
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
67269 CGTTCTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
67334 ATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
*
67399 GGTTTTGCAAGAAACACTTTCTCCCCAACAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* *
67463 GACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
67527 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
*
67548 GATGGTTTTCTTTGGCATGGAAAACTTTTGTTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
67613 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
67678 ACAATCCCTT-ATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
67742 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
67807 ATTAATTTTAGGATTAGGCACCACAAACACAATCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
67872 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
67936 GACAAACAAGGATTCGAACAATGATCTTCATTTGTTTTGAGA-TAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
* *
68000 CTCGTTAGGGTAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
*
68021 GATGGTTTTCATTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
68086 TTAAATAAGACAAGTATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* *
68151 ACAATCCCTTCATTAGGATATATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTT
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
68216 CGTTCTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
68281 ATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
* *
68346 GGTTTTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTC-TAAGTTCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
68410 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTTAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
68475 CTCTTTAGGGTAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
* * *
68496 GATGGTTTTCTTTGGCATAGAAAACTTTTATTTGCCTTATTTTCCTTAAAATCAAAGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* * * *
68561 TTAAATAAGACAAGCATTGACTGTCATAACAGTCTCCAATTTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* *
68626 ACAATCCCTTCATTATGATACATGACAATGAT-CTTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
131 ACAATCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCACAAGAGAAGCTTTTCTTCTT
* * * *
68690 CCGTTACTAATAGAATCAAAGTTTGTCCCATAAATAAGACAAACATGAATACTCATACTAATCCC
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
68755 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
260 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
68820 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAG
325 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAG
68885 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTAT
390 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTAT
* *
68950 CTTCTTTAGGGTAAATGTTAATT
455 CCTCTTTAGGGCAAATGTT-ATT
*
68973 -ATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATAAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
69037 TTAAATAAGACAAGCATTGATTCTCATAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
69102 ACAATCCCTTCATTAGGATACATGACATTGATTCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
69167 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
69232 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
69297 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
**
69362 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGAAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
69426 CTCTTTAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
69447 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
69512 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
69577 ACAATCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
69642 CGTTATTGATAGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
69707 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTCCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
69772 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
69836 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
69900 CTCTATAGGGCAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
*
69921 GATGGTTTTCTTTGGCATGGAAAACTTTTGTTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
69986 TTAAATAAGACAAGTATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
70051 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTT
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
70116 CGTTCTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
70181 ATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
* *
70246 GGTTTTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTC-TAAGTTCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* *
70310 GACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTTAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
70375 CTCTTTAGGGTAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
* * * *
70396 GATGGTTTTCTGTGGCATAGAAAACTTTTATTTGCCTTATTTTCCTTAAAATCAAAGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* * *
70461 TTAAATAAGACAAGCATTGACTCTCATAACAGTCTCCAATTTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* * *
70526 ACAATCCCTTCATTATGATACATGACAATGATCCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
* * *
70591 CGTTACTAATAGAATCAAAGTTTGTCCCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
70656 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
70721 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
70786 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
70851 CTCTTTAGGGTAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
*
70872 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATAAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* *
70937 TTAAATAAGCCAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCAAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
71002 ACAATCCCTTCATTAGGATACATGACATTGATTCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
71067 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
71132 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
71197 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
71261 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
71325 CTCTTTAGGGTAAATGTTATT
456 CTCTTTAGGGCAAATGTTATT
71346 GATGGTTTT
1 GATGGTTTT
71355 TGAAAGCTTA
Statistics
Matches: 15063, Mismatches: 571, Indels: 125
0.96 0.04 0.01
Matches are distributed among these distances:
473 682 0.05
474 2824 0.19
475 5561 0.37
476 5578 0.37
477 18 0.00
479 1 0.00
480 1 0.00
481 1 0.00
483 1 0.00
484 5 0.00
485 357 0.02
486 34 0.00
ACGTcount: A:0.32, C:0.20, G:0.15, T:0.33
Consensus pattern (476 bp):
GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
CTCTTTAGGGCAAATGTTATT
Found at i:57044 original size:951 final size:951
Alignment explanation
Indices: 55184--71354 Score: 26974
Period size: 951 Copynumber: 17.0 Consensus size: 951
55174 GTTGTCATCA
* * * * * * * *
55184 GATGGTTTTCTTTTGCATGGAAATC-TTTCTTTACCTTACTTTCCATAAAATCAAAGTTTGTA-C
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTG-ACC
* * * * * * * *
55247 CTTAAATGAGACATGCATTGATTCTCGTAAGAGTCCCCATTCTTTTCAAGAATGAGAACTGAAAA
65 CTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAA
* * * * ** *
55312 CACAAT-CCTTGCATTAGGATACAAGACATTAATGCTTTGGGGTTGCAAGAGAAGCCTTTCTTTC
130 TACAATCCCTT-CATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC-TTC
* *
55376 TACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATC
193 TTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT-
* * * * * * * *
55441 CCCT-TTCTTTTTAGGGTTAGGCACCATAAACATAGTTTTCTCATAAGGATACATGATATTGATG
257 CCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATG
* ** ** * * * * * * *
55505 CTTTGGTTTTGCAAGATACGTTTTCTTTCCACCTATTTTTGTAAAGT-GTAAGTTCATTCCGCAA
322 CTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAA
* * ** * * * * *
55569 AAGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACAT
387 AAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACAT
* * * ** * * * * * *
55634 TCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAT
452 TATCCTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTAT
* * * * * * *
55699 TTTCCATAAAATCAAAGTTTGTA--CTTCAAATGAGACATGCATTGATTCTCATAAAAGTCCCCA
517 TTTCCTTAAAATCAACGTTTG-ACCCTT-AAATAAGACAAGCATTGATTCTCGTAACAGTCTCCA
* * * * * * * *
55762 ATCTTGAT-AAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATACAAGACATTAATGCTTT
580 ATCTT-TTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
* * * *
55826 GGGGTCACAAGAGAAGCTTTTCTTTCTACCGTTATGGATAGAATCAAAGTTTGTTTCTTAAATAA
644 GGTGTCACAAGAGAAGCTTTTC-TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAA
* * * * * *
55891 GACAAACAAGAATACTTATACTAATCCCTCTTC-TTTTCAGGATTAGGCACCATAAACATAGTTT
708 GACAAACATGAATACTCATACTAATCCCTATTCATTTT-AGGATTAGGCACCACAAACACAGTCT
** * * * * * * * *
55955 TCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCTATTTT
772 TCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTT
* * * * * * ** ** * * * **
56020 TGTAAAGT-ATAAGTTCATTCCTCAAATGAGACAAACATGGATTATAGTAAGGACCTTAATTCAA
837 TGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGT
* * * * ** * *
56084 TTCGTGATTAGGCACTATAAACACATTCTCCT-TATCAGGATACATGATATT
902 TTTGAGA-TAGGCACTATAAACACATTATCCTCT-TTAGGGCAAATGTTATT
* * * * * * * *
56135 GATAGTTTTCTTTTGCAAGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTA-C
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTG-ACC
* * * * * * * * * *
56199 TTTAAATGAGTCATGCATTGATTCTCGTAA-ACGTC-CCTATTTTTTTCAACAATGGGTACCAAA
65 CTTAAATAAGACAAGCATTGATTCTCGTAACA-GTCTCC-AATCTTTTCAAGATTGGGAACCGAA
* * ** * ** * * *
56262 AACACATTCTTTTCATTAGGATA-AAGACATCAATGCTTTGGGGTCGCCAGAGAAGCTTTTCTTT
128 AATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC-TT
* * * *
56326 CTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAAATAAACATGAATACTCAAACTAAT
192 CTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * * ** * ** * *
56391 CCCCT-TTCTTTTTGGGGTTAGGAACCATAAACATTGTTTTCTAATAAGGATACATGATATTGAT
257 -CCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAT
* * * * *** * * * * * *
56455 GCTTTGATTTTGCAAGATACGCTTTATTTGCACCTATTTTTGTAAAGT-ATAAGTTCATTCCTCA
321 GCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCA
* * ** ** * * * * * *
56519 AATGAGACAAACATGGATTATAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAATCACG
386 AAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACA
* * * **** * * * * * *
56584 TTCTCCTCATCATAATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTA
451 TTATCCTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTA
* * * * * * * * *
56649 TTTTCCTTAAAATCAAAGCTTGTA-CTTTAAATGAGTCATGCAGTGATTCTCGTAAAAGTCCCCA
516 TTTTCCTTAAAATCAACGTTTG-ACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCA
* * * * * * *
56713 TTCTTTTCAAGAATGGGAACCAAAAACACATTCCTTTCATTAGGATA-AAGACATT-AGTGCTTT
580 ATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGA-TGCTTT
* ** * *
56776 GGGGTCACAAGAGAAGCTTTTTCCTTCAACCGTTATTGATACAATCAAAGTTTGTCTTTTAAATA
644 GGTGTCACAAGAGAAGC-TTTT-CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATA
* * * * * *
56841 AGACAAACAAGAATACTCATACTAATCCCCT-TTCTTTTTAGGGTTAGGCACCATAAACATAGTT
707 AGACAAACATGAATACTCATACTAAT-CCCTATTCATTTTAGGATTAGGCACCACAAACACAGTC
* * * * ** * * *
56905 TTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGATACGTTTTCTTCCCACCGATTT
771 TTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGT
* * * * * * * ** * *
56970 TTGTAAAGT-ATAAGTTCATTCCTCAAAATAGACAAACACGGATTCTAGTAAGGATCTTCATTCA
836 TTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCG
* * * * * * ** * *
57034 TTTTGTGATTAGGCCCTATAATCACATTCTCCTCATCAGGATACATGATATT
901 TTTTGAGA-TAGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
* * * * * * *
57086 GATGGTTTCCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCCAA-ATTTGTA-
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAAT-CAACGTTTG-AC
* * * * * * * * *
57149 CTTTAAATGAGACATGCACTGATTCTCATAAAAGT-TCCCATTCTTTTCAAGAATGGGAACCAAA
64 CCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCT-CCAATCTTTTCAAGATTGGGAACCGAA
* * * * * * * *
57213 AACACATTCCTTTCATTAGGATA-AAGACATTAATGCTTTGGGGTCGCAAGAGAAGCCTTTCTTT
128 AATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC-TT
* * *
57277 CTACCGTTATTGATAGAATCAAAGTTTGTCACTTAAATAAGGCAAACATGAATACTCATACTAAT
192 CTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * * * * * *
57342 CCCCAATCCTTTCATGTTTAGGCAGCACAAACATATTCTTCTCATATTGATACATGAGGACACAC
257 CCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTC-----G-T--A--AGGACACAC
* * * * * *
57407 GGTATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACCAATTTTTTTAAAGTC-TAAGTT
312 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTG
* * *
57471 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAACGATCTTCATTCGTTTTGAGATTAGGTAGT
377 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACT
*
57536 ATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTA
442 ATAAACACATTATCCTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTA
*
57601 TTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAAC
507 TTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAAC
* **
57666 AGTCTCCAATCTTTTCATG-TTCGAAAACCGAAAATACAATCCCTTCATTAGGATACATGACATT
572 AGTCTCCAATCTTTTCAAGATT-GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATT
*
57730 GATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCT
636 GATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCT
*
57795 TAAATAAGACAAACATGAATACTCATACTAATCCCTATCCATTTTAGGATTAGGCACCACAAACA
701 TAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACA
57860 CAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACC
766 CAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACC
*
57925 AATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAAAGACAAACAAGGATTCGAACAATGATCTTC
831 AATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTC
* *
57989 ATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTAATT
896 ATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
58045 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
58110 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
58175 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTT
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
* * *
58240 CGTTATTGATAGAATCAAAGTTTGTCGCCTAAATAAGACAAACATGAATACTCAAACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
58305 ATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGGTGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
58370 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
58435 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
58500 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
58565 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
58630 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
*
58695 CAAGAGAAGCTTTTCTTCTTCCGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
*
58760 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAA
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
58825 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
*
58890 TTAAGTGTGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
*
58955 GGAACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
911 GGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
58996 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
59061 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTAGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* * *
59126 ACAATCCCTTCAATAGGAAAAATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
59191 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
59256 ATTCATTTTAGGATTAGGCACCCCAAACACAGACTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
59321 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
59386 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
59451 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
59516 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
* **
59581 TCATG-TTCGAAAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
586 TCAAGATT-GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
*
59645 ACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
650 ACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
59710 ATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAA
715 ATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAA
59775 GGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGT
780 GGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGT
59840 CTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGAT
845 CTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-
*
59905 TAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATT
909 TAGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
*
59948 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCCTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
60013 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAGCCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
60078 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
60143 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAACCATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
60208 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
60273 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
60338 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTCTAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
60403 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
60468 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
* * * *
60533 TCAAGATTAGGAACCGAAAATACCATCCCTTCAATAGGATACATGACATTGATGCTTTGATGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
*
60598 CAAGAGAAGCTTTTCTTCTTCCGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
*
60663 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCCCAAACACAGTCTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
*
60728 GACACACGATATTGATGCTTTGGTTTTTCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
* *
60793 TTAAGTGCGTGCCTCAAAAGAGACAAATAATGATTCGAACAATGATCTTCATTCGTTTTGAGATT
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-T
*
60858 AGGCACTATAAACACATTATCCTCTTTAGGGCAAATGCTATT
910 AGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
60900 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
60965 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
61030 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCATTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
61095 CGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
61160 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
61225 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
61290 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
61354 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
61419 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
* *
61484 TCATGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
*
61549 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAAGAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
61614 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
61679 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
*
61744 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCAAACAATGATCTTCATTCGTTTTGAGATA
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
* *
61809 GGAACGATAAACACATTATCCTCTTTAGGGCAAATGTTATT
911 GGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
61850 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
61915 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
61980 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCATTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
62045 CGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
62110 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
62175 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
62240 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
62304 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
62369 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
* * * *
62434 TCAAGATTAGGAACCGAAAATACAATCCCTTCAATAGGAAAAATGACATTGATGCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
62499 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
* *
62564 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCCCAAACACAGACTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
62629 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
62694 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATT
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-T
62759 AGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
910 AGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
62801 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* **
62866 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATG-TTCGAAAACCGAAAA
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATT-GGGAACCGAAAA
62930 TACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
130 TACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
*
62995 CCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
63060 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
260 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
*
63125 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAA
325 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAG
63189 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTAT
390 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTAT
* *
63253 CCTCTTTAGGGTAAATGTAATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTT
455 CCTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTT
* *
63318 CCCTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTTATTCTCGTAACAGTCTCCAATCTT
520 CCTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTT
*
63383 TTCAAGATTGGGAGCCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
585 TTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
63448 ACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
650 ACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
*
63513 ATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCCCAAACACAGTCTTCTCGTAA
715 ATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAA
63578 GGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGT
780 GGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGT
63643 CTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGAT
845 CTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-
63708 TAGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
909 TAGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
63751 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
63816 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTAGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* * *
63881 ACCATCCCTTCAATAGGATACATGACATTGATGCTTTGATGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
63946 CGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
64011 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
*
64076 GGTTTTTCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* *
64141 GACAAATAATGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
64206 CTCTTTAGGGCAAATGCTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
64271 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
64336 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
* *
64401 CAAGAGAAGCATTTCTTCTTCCGTTACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
64466 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
64531 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
64596 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
*
64661 GGAACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
911 GGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
64702 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
64767 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
64832 ACAATCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
64897 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAAGAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
64962 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
65027 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* * *
65092 GACAAACAAGGATTCAAACAATGATCTTCATTCGTTTTGAGA-TAGGAACGATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
65156 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
65221 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
65286 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
* * *
65351 CAAGAGAAGCATTTCTTCTTCCGTTACTGATAGAATCAAAGGTTGTCTCTTAAATAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
65416 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
65481 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
65546 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
*
65611 GGAACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
911 GGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
65652 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
65717 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* *
65782 ACAATCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGAGAAGCATTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
65847 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAACAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
*
65912 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGATTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
*
65977 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGACTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
* *
66041 GACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
66105 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTGTTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
66170 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
66235 TCAAGATTGGGAACCGAAAATACAATCCCTT-ATTAGGATACATGACATTGATGCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
*
66299 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAAGAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
*
66364 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
66429 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
*
66494 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCAAACAATGATCTTCATTCGTTTTGAGATA
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
*
66559 GGAACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
911 GGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
66600 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* * *
66665 TTAAATAGGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTAGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* *
66730 ACCATCCCTTCAATAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
66795 CGTTATTGATAGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
66860 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTCCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
66925 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
66989 GACAAACAAGGATTCGAACAATGATCTTCATTTGTTTTGAGA-TAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
* * *
67053 CTCGTTAGGGTAAATGTTATTGATGGTTTTCATTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
*
67118 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGTATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
67183 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
* *
67248 CAAGAGAAGCTTTTCTTCTTTCGTTCTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
*
67313 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
*
67378 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCAACAATGTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
*
67443 -TAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATA
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
*
67507 GGAACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
911 GGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
*
67548 GATGGTTTTCTTTGGCATGGAAAACTTTTGTTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
67613 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
67678 ACAATCCCTT-ATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
67742 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
67807 ATTAATTTTAGGATTAGGCACCACAAACACAATCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
67872 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
67936 GACAAACAAGGATTCGAACAATGATCTTCATTTGTTTTGAGA-TAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
* * *
68000 CTCGTTAGGGTAAATGTTATTGATGGTTTTCATTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
*
68065 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGTATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
*
68130 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATATATGACATTGATGCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
* *
68195 CAAGAGAAGCTTTTCTTCTTTCGTTCTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
*
68260 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
*
68325 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
* *
68390 -TAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTTAGATT
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-T
*
68454 AGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATT
910 AGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
* * *
68496 GATGGTTTTCTTTGGCATAGAAAACTTTTATTTGCCTTATTTTCCTTAAAATCAAAGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* * * *
68561 TTAAATAAGACAAGCATTGACTGTCATAACAGTCTCCAATTTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* *
68626 ACAATCCCTTCATTATGATACATGACAATGAT-CTTTTGGTGTCACAAGAGAAGCTTTTCTTCTT
131 ACAATCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCACAAGAGAAGCTTTTCTTCTT
* * * *
68690 CCGTTACTAATAGAATCAAAGTTTGTCCCATAAATAAGACAAACATGAATACTCATACTAATCCC
195 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
68755 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
260 TATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTT
68820 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAG
325 TGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAG
68885 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTAT
390 AGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTAT
* *
68950 CTTCTTTAGGGTAAATGTTAATT-ATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTT
455 CCTCTTTAGGGCAAATGTT-ATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTT
* *
69014 TCCTTAAAATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCATAACAGTCTCCAATCT
519 TCCTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCT
*
69079 TTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATTCTTTGGTGT
584 TTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGT
69144 CACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAA
649 CACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAA
69209 CATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTA
714 CATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTA
69274 AGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAG
779 AGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAG
69339 TCTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA
844 TCTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA
**
69404 TAGAAACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
909 TAGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
69447 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
*
69512 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
*
69577 ACAATCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
*
69642 CGTTATTGATAGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
* *
69707 ATTCATTTTAGGATTAGGCACCCCAAACACAGTCTCCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
69772 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
*
69836 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGAACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
* *
69900 CTCTATAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTGTTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
*
69965 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGTATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
70030 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
* *
70095 CAAGAGAAGCTTTTCTTCTTTCGTTCTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
*
70160 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
*
70225 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
* * *
70290 -TAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTTAGATT
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-T
*
70354 AGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATT
910 AGGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
* * * *
70396 GATGGTTTTCTGTGGCATAGAAAACTTTTATTTGCCTTATTTTCCTTAAAATCAAAGTTTGACCC
1 GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
* * *
70461 TTAAATAAGACAAGCATTGACTCTCATAACAGTCTCCAATTTTTTCAAGATTGGGAACCGAAAAT
66 TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
* * *
70526 ACAATCCCTTCATTATGATACATGACAATGATCCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
131 ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
* * *
70591 CGTTACTAATAGAATCAAAGTTTGTCCCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
196 CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
70656 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
261 ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
70721 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
326 GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
70786 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
391 GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
*
70851 CTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
456 CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
* *
70916 CTTAAAATAAACGTTTGACCCTTAAATAAGCCAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
521 CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
* *
70981 TCAAGATTGGGAACCAAAAATACAATCCCTTCATTAGGATACATGACATTGATTCTTTGGTGTCA
586 TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
71046 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
651 CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
71111 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
716 TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
71176 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
781 GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
71241 -TAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
846 TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
*
71305 GGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATT
911 GGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
71346 GATGGTTTT
1 GATGGTTTT
71355 TGAAAGCTTA
Statistics
Matches: 14578, Mismatches: 580, Indels: 125
0.95 0.04 0.01
Matches are distributed among these distances:
947 752 0.05
948 1394 0.10
949 1528 0.10
950 3476 0.24
951 4585 0.31
952 2040 0.14
953 5 0.00
954 1 0.00
957 1 0.00
958 4 0.00
959 256 0.02
960 241 0.02
961 265 0.02
962 29 0.00
963 1 0.00
ACGTcount: A:0.32, C:0.20, G:0.15, T:0.33
Consensus pattern (951 bp):
GATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCC
TTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAAT
ACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTC
CGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
ATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTT
GGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGA
GACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATC
CTCTTTAGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTC
CTTAAAATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTT
TCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
CAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
TGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAG
GACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC
TTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATA
GGCACTATAAACACATTATCCTCTTTAGGGCAAATGTTATT
Found at i:72048 original size:20 final size:19
Alignment explanation
Indices: 72023--72062 Score: 62
Period size: 20 Copynumber: 2.1 Consensus size: 19
72013 TCCCGTGTAA
*
72023 ATGTATCGATACAATTTTTG
1 ATGTATCGATA-AATATTTG
72043 ATGTATCGATAAATATTTG
1 ATGTATCGATAAATATTTG
72062 A
1 A
72063 AAATATAGCC
Statistics
Matches: 19, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
19 8 0.42
20 11 0.58
ACGTcount: A:0.35, C:0.07, G:0.15, T:0.42
Consensus pattern (19 bp):
ATGTATCGATAAATATTTG
Found at i:72134 original size:13 final size:13
Alignment explanation
Indices: 72116--72141 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
72106 AATTTTTTTG
72116 TGTATCGATACAT
1 TGTATCGATACAT
72129 TGTATCGATACAT
1 TGTATCGATACAT
72142 ACTTGCTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:72884 original size:21 final size:21
Alignment explanation
Indices: 72843--72886 Score: 54
Period size: 21 Copynumber: 2.1 Consensus size: 21
72833 CTCCCCTTTA
* *
72843 TCTCCCCCGTTTATTAATAAT
1 TCTCCCCCGTTAATCAATAAT
72864 TCTCCCCC-TTAATCAAGTAAT
1 TCTCCCCCGTTAATCAA-TAAT
72885 TC
1 TC
72887 ATATCAAAAA
Statistics
Matches: 20, Mismatches: 2, Indels: 2
0.83 0.08 0.08
Matches are distributed among these distances:
20 6 0.30
21 14 0.70
ACGTcount: A:0.25, C:0.32, G:0.05, T:0.39
Consensus pattern (21 bp):
TCTCCCCCGTTAATCAATAAT
Found at i:76815 original size:15 final size:15
Alignment explanation
Indices: 76795--76825 Score: 53
Period size: 15 Copynumber: 2.1 Consensus size: 15
76785 ATTTCGTTTG
*
76795 GAGCTTCTTCATTTT
1 GAGCTTCCTCATTTT
76810 GAGCTTCCTCATTTT
1 GAGCTTCCTCATTTT
76825 G
1 G
76826 GACATTTTTA
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.13, C:0.23, G:0.16, T:0.48
Consensus pattern (15 bp):
GAGCTTCCTCATTTT
Found at i:78658 original size:21 final size:21
Alignment explanation
Indices: 78629--78673 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 21
78619 AAGTTTTCAT
*
78629 TTTTCTTAGCTAAC-TCATTA
1 TTTTCTTAGCCAACTTCATTA
*
78649 TTTTCATTAGCCAACTTCTTTA
1 TTTTC-TTAGCCAACTTCATTA
78671 TTT
1 TTT
78674 CAACTTCCAA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
20 5 0.24
21 8 0.38
22 8 0.38
ACGTcount: A:0.22, C:0.20, G:0.04, T:0.53
Consensus pattern (21 bp):
TTTTCTTAGCCAACTTCATTA
Found at i:83917 original size:474 final size:474
Alignment explanation
Indices: 80763--98569 Score: 31101
Period size: 474 Copynumber: 37.6 Consensus size: 474
80753 GATCCTAACA
*
80763 GTTTTCTTTGTCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
80828 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
**
80893 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTTGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
80958 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
81023 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACAATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
81088 TTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
81153 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCTT
81218 TAGGGTAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
* * * *
81238 GTTTTCTTTGGCATAGAAAACATTTATTTGCCCTATTTTCCTTAAAATCAAAGCTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * *
81303 ATAAGACAAGCATTGACTCTCATAACAGTCTCCAATCTTTTCAAGATTGGGAATCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
81368 TCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
81433 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
81498 ATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
81563 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAATGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
*
81628 AACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
81693 TTAGGGTAAATGTTATTGATG
454 TTAGGGTAAATGTTATTGATG
* *
81714 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTTAAATAAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
81779 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
81844 TCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
81909 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
81974 ATTTTAGGATTAGGCACCACAAACATAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
82039 TTGCAAGAAACACTTTCTCCCCACGAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
*
82104 AACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
82169 TTAGGGTAAATGTTATTGATG
454 TTAGGGTAAATGTTATTGATG
82190 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAAT-AATCGTTTGACCCTTA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAA-CGTTTGACCCTTA
82254 AATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACA
65 AATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACA
*
82319 ATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGTTTTTCTTCTTCCGT
130 ATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGT
82384 TATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATT
195 TATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATT
*
82449 CATTTTAGGATTAGGCACCACAATCACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGT
260 CATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGT
* *
82514 TTTGCAAGAAACACTTTTTCCCCACCAATGTTTGTAAAGTCTAAATGCGTGCCTCAAAAGAGACA
325 TTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACA
* *
82579 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCATTACAAACACATTATCCTCTT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
82644 TAGGGTAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
* *
82664 GTTTTCTTTGGCATGGAAAA-TTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCTTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * * *
82728 ATAAGATAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATGTTTGGAAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
82793 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAGGTTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
82858 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
82923 ATTTTAGGATTAGGCACCACAAACATAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
82988 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
**
83053 AACAAGGATTCAAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
83118 TTAGGGTAAATGTTATTGATG
454 TTAGGGTAAATGTTATTGATG
*
83139 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATAAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
83204 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
83269 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGTTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
83334 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
83399 ATTTTAGGATTAGGCACCACAATCACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
83464 TTGCAAGAAACACTTTTTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* *
83529 ACAAGGATTCGAACAATGATCTTCATTCATTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
*
83594 AGGGCAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
*
83613 GTTTTCTTTGGCATGGAAAACTTTTACTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
83678 ATAAGACAAGCATTGATTCTCATAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
83743 TCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
83808 TTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
83873 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
83938 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
*
84003 AACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
84068 TTAGGGTAAATGTTATTGATG
454 TTAGGGTAAATGTTATTGATG
* *
84089 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTTAAATAAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * * *
84154 ATAAGACAAGCATTGATTCTCATAACAGTCTCAAATCTTTTCATGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
84219 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* * * *
84284 ATTAATAGAATCAAAGTTTGTCTCTTATATAAGACAAATATGAATACTCATACAAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
84349 ATTTTAGGATTAGGCACCACAATCACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * *
84414 TTGCAAGAATCACTTTTTCCCCACCAATGTTCGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
84479 ACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
* * *
84544 AGGGCAAATGTTACTGAAG
456 AGGGTAAATGTTATTGATG
* *
84563 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGCTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
84628 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
84693 TCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
84758 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
84823 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
84888 TTGCAAGAAACACTTTCTCCTCGCCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
*
84953 AACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
85018 TTAGGGTAAATGTTATTGATG
454 TTAGGGTAAATGTTATTGATG
* *
85039 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATAAACGTTTGACCCTCAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
85104 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAATCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
85169 TCCGTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
85234 ATTGATAGATTCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
85299 ATTATAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGGA-ATTAATGCTTTGGT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACAC-GATATTGATGCTTTGGT
* *
85363 TTTGCAAGAAACGCTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGTGTGCCTCAAAAGAGACA
325 TTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACA
*
85428 AACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
*
85493 TAGGGCAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
* *
85513 GTTTTCTTTGGCATGGAAAACTTTTATTTGCGCTATTTTCCTTAAAATCAACGTTTGACCTTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
85578 ATAGGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAAATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
85643 TCCGTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
85708 ATTGATAGATTCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
85773 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
85838 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAATGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
85903 ACAAGGATTTGAACAATGATCTCCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
85968 AGGGTAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
* * *
85987 GTTTTCTTTGGCGTGGAAAACTTTTATTTGCGCTATTTTCCTTAAAATCAACGTTTGACCTTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
86052 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
86117 TCCCTTCATTAGGATACATGGCATTGATGCTATGGTGTCACAAGAGAAGCTTTTCTT-TGTCCGT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCT-TCCGT
* *
86181 TATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACACATACTAATCCCTACT
195 TATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATT
* * * * *
86246 CATTTTAGGATTAGGCACCACAAACAAAGTCTTCTTGTAAGGACACACAAAAATTAATGCTTTGG
260 CATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACAC-GATATTGATGCTTTGG
* *
86311 TTTTGCAAGAAACGCTTTCTCCCCACCAATGTTTGTAAAGTCTAAATGCGTGCCTCAAAAGAGAC
324 TTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGAC
*
86376 AAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACAATATCCTCT
389 AAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCT
*
86441 TTAAGGTAAATGTTATTGATG
454 TTAGGGTAAATGTTATTGATG
* * *
86462 GTTTTCTTTGGCGTGGAAAACTTTTATTTGCGCTATTTTCCTTAAAATCAACGTTTGACCTTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
86527 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* * *
86592 TCCCTTCATTAGGATACATGGCATTGATGCTTTGGTATCACAAGAGAAGCTTTTCTTCGTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
86657 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACACATACTAATCCCTACTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
86722 ATTTTAGGATTAGGCACCACAAACA-ATGTCTTCTTGTAAGGACACACGGA-ATTAATGCTTTGG
261 ATTTTAGGATTAGGCACCACAAACACA-GTCTTCTCGTAAGGACACAC-GATATTGATGCTTTGG
* *
86785 TTTTGCAAGAAACGCTTTCTCCCCACCAATGTTTGTAAAGTCTAAATGCGTGCCTCAAAAGAGAC
324 TTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGAC
* *
86850 AAACAAGGATTTGAACAATGATCTTCATTTGTTTTGAGATAGGCACTATAAACACAATATCCTCT
389 AAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCT
86915 TTAGGGTAAATGTTATTGATG
454 TTAGGGTAAATGTTATTGATG
* * *
86936 GTTTTCTTTGGCGTGGAAAACTTTTATTTGCGCTATTTTCCTTAAAATCAACGTTTGACCTTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
87001 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
87066 TCCCTTCATTAGGATACATGGCATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCGTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
87131 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACACATACTAATCCCTACTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* * *
87196 ATTTTAGGATTAGGCACCACAAACAAAGTCTTCTTGTAAGGACACACGGA-ATTAATGCTTTGGT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACAC-GATATTGATGCTTTGGT
* * * *
87260 TTTGCAAGAAACGCTTTCTCCCCACCAATTTTTTTAAAGTCTAAGTTCGTGCCTCAAAAGAGACA
325 TTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACA
* * *
87325 AACAAGGATTCGAACACTGATCTTCATTCGTTTTGAGATTCGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
87390 TTAGGGTAAATGTTATTGATG
454 TTAGGGTAAATGTTATTGATG
* *
87411 GTTTTCTTTGGCATAGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * *
87476 ATAAGACAAGCATTGACTCTCATAACAGTCTCCAATCTTTTCAAGATTGGGAACCAAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* * *
87541 TCCCTTCATTACGATACATGACAATGATGCTTTGGGGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
87606 AGTGATAGAATCAAAGTTTGTGTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
87671 ATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
87736 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAATGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
87801 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
*
87866 AGCGTAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
* * *
87885 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCTTATTTTCCTTAAAATAAATGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
87950 ATAAGACAAGCATTGATTCTCATAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
88015 TCCCTTCATTAGGATACATGACATTGATGCTTTGATGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
88080 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
88145 ATTTTAGGATTAGG-----------CAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
88199 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGGGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
* * *
88264 AACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATTGGCACTATAAACACATTATCCTTTT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
*
88329 TAGGGCAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
* *
88349 GTTTTATTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAAGCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
88414 AAAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
88479 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCGTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
88544 ATTAATAGAGTCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
88609 ATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
88674 TTGCAAGAAACACTTTCTCCCCACTAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
88739 ACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
88804 AGGGTAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
88823 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
88888 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
88953 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
89018 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
89083 ATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
89148 TTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* *
89213 ACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATAGGCACTATTAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
89278 AGGGTAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
89297 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
89362 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACTGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
89427 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
89492 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
89557 ATTTTAGGATTAGG-----------CAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
89611 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
89676 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
89741 TAGGGTAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
* *
89761 GTTTTCTTTGGCATGGAAAAC-TTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGGCCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * *
89825 ATAAAACAAGCATTGACTCTCGTAACAGTCTCCAACCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
89890 TCCCTTCATTAGGATACATGGCATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
89955 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
90020 ATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
90085 TTGCAAGAAACACTTTCTCCCCACTAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* * *
90150 ACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATTGGCACTATAAACACATTATCCTTTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
*
90215 AGGGCAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
* *
90234 GTTTTATTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAAGCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
90299 AAAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
90364 TCCCTTCATTAGGATACATGACATTGATGCTTTGATGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
90429 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACGTGAAAACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
90494 ATTTTAGGATTAGG-----------CAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
90548 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGGGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
* *
90613 AACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATAGGCACTATTAACACATTATCCTCTT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
90678 TAGGGTAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
90698 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
90763 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACTGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
90828 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
90893 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
90958 ATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
91023 TTGCAAGAAACACTTTCTCCCCACTAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
91088 ACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
91153 AGGGTAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
* *
91172 GTTTTATTTGGCATAGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
91237 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
91302 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTCTTTCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* * *
91367 ACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAGAAGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
91432 ATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
91497 TTGCAAGAAACACTTTCTCCCCACCAGTTTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
91562 ACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
91627 AGGGTAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
91646 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
91711 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACGGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
91776 TCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
91841 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
91906 ATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * * * *
91971 TTGTAAGAAACACTTTCTCCCCACTAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAATAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
92036 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
92101 AGGGTAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
*
92120 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCTACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
92185 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACTGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
92250 TCCCTTCATTAGGATACAGGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
92315 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
92380 ATTTTAGAATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
92445 TTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* *
92510 ACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATAGGCACTATAGACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTC---
92575 AGGGTAAATGTTATTGATGGTTTTCATTAGGGTAAATGTTATTGATG
453 -----------------------T--TTAGGGTAAATGTTATTGATG
* *
92622 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTTTAACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
92687 ATAAGACAAGCATTGATTCTCGTAACAGTCTCGAATCTTTTCAAGATTGGGAACTGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* * *
92752 TCCCTTCGTTAGGATACATGACATTAATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
92817 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
92882 ATTTTAGGATTAGG-----------CAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
92936 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
93001 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
93066 TAGGGTAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
*
93086 GTTTTCTTTGGCATGGAAAAC-TTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
93150 ATAAGACAAGCATTGACTCTCGTAACAGTCTCCAACCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
93215 TCCCTTCATTAGGATACATGGCATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
93280 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
93345 ATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
93410 TTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
93475 ACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
93540 AGGGTAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
93559 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
93624 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
93689 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTT-TGTCGGT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCT-TCCGT
* * * *
93753 TATCGATAGAATCGAAGTTGGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTACT
195 TATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATT
* *
93818 CATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACATGATATTAATGCTTTGGT
260 CATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGT
* * *
93883 TTTGCAAGAAACGCTTTCTCCCCACCAAT-TCTTTTAAAGTCTAAGTTCGTGCCTCAAAAGAGAC
325 TTTGCAAGAAACACTTTCTCCCCACCAATGT-TTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGAC
* * *
93947 AAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAAATTTGGCACTATAAACACATTATCCTC
389 AAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTC
94012 TTTAGGGTAAATGTTATTGATG
453 TTTAGGGTAAATGTTATTGATG
* *
94034 GTTTTCTTTGGCAAGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
94099 ATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
94164 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTCCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
94229 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* * * *
94294 ATTTTAGGATTAGGCACCACAAACATAGTCTTCTCGTAAGGATACACGATATTAATACTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * *
94359 TTGCAAGAAACGCTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* *
94424 ACAAGGATTTGAACAATCATCTTCATTCGTTTTCAGATTAGGCACTATAAACACATTATCCTCTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCTT
94489 TAGGGTAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
* *
94509 GTTTTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * * *
94574 ATAAGACAAGTATTGACTCTCGTAATAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
94639 TCCCTTCATTAGGATACATGGCATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
94704 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
94769 ATTTTAGGATTATGCACCATAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
94834 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* *
94899 ACAAGGATTCGAACAATGATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCTT
94964 TAGGGTAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
* *
94984 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATAAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * *
95049 ATAAGACAAGCATTGATTCTCGTAACAGTCTCGAATCTTTTGAAGATTGGGAACTGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
95114 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAGAAGAGAAGCTTTTCTTCTCCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
95179 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* * *
95244 ATTTTAGGATTAGGCACCACAATCATAGTCTTCTCCTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
95309 TTGCAAGAAACGCTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* * *
95374 ACAAGGATTCGAACAATGATCTTTATTCGTTTTGAGATAGGAACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
*
95439 AGGGCAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
95458 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * *
95523 ATAAGACAAGCATTGATTCTCATAACAGTCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAT
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
95588 TCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
95653 ATTGATAGAATCAAAGTTTTTCTCTTAAATAAGACAAACATGAATACTAATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
95718 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTTGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
95783 TTCCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTCCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
* *
95848 AACAAGGATTCGATCAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
95913 TTAGGGTAAATGTTATTGATG
454 TTAGGGTAAATGTTATTGATG
95934 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
95999 ATAAGACAAGCATTGATTCTCGTAACTGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
96064 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAGGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
96129 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
96194 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * *
96259 TTGCAAGAAACACTTTCTCCCCACCAATTTTTTTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
96324 ACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
*
96389 AGGGTAAATGTTATTGGTG
456 AGGGTAAATGTTATTGATG
*
96408 GTTTTCTTTGGCATAGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
96473 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
96538 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCGTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
96603 ATTGATAGAATCAGAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
96668 ATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
96733 TTGCAAGAAACACTTTCTCCCCACTAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGGCAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
96798 ACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
96863 AGGGTAAATGTTATTGATG
456 AGGGTAAATGTTATTGATG
*
96882 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCATAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
96947 ATAAGAAAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGAAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
97012 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
97077 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
97142 ATTTTAGGATTAGGCACCACACACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * * *
97207 TTGTAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAATAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
97272 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
*
97337 AGGGTAAATGTTGTTGATG
456 AGGGTAAATGTTATTGATG
* *
97356 GTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
97421 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
97486 TCCCTACATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCGTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
97551 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
97616 ATTTTAGGATTAGGCACCAC-AA-ACAGTCTTCTCGTAAGGATACACGATATTAATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * * * * *
97679 TTGCCAGAAACGCTTTCT-CCCAACAGTTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
97743 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCTT
97808 TAGGGTAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
* *
97828 GTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
97893 ATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
97958 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGAT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
98023 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
98088 ATTTTAGGATTAGGCACCAC-AA-ACAGTCTTCTCGTAAGGATACACGATATTAATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * * * * *
98151 TTGCCAGAAACGCTTTCT-CCCAACAGTTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
98215 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCTT
98280 TAGGGTAAATGTTATTGATG
455 TAGGGTAAATGTTATTGATG
* *
98300 GTTTTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
98365 ATAAGATAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGCTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
98430 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
98495 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
98560 ATTTTAGGAT
261 ATTTTAGGAT
98570 ACCTCATACG
Statistics
Matches: 16625, Mismatches: 602, Indels: 213
0.95 0.03 0.01
Matches are distributed among these distances:
463 721 0.04
464 905 0.05
466 1 0.00
471 80 0.00
472 829 0.05
473 590 0.04
474 7295 0.44
475 3314 0.20
476 2439 0.15
477 2 0.00
491 78 0.00
492 84 0.01
500 1 0.00
502 286 0.02
ACGTcount: A:0.32, C:0.19, G:0.16, T:0.34
Consensus pattern (474 bp):
GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
AGGGTAAATGTTATTGATG
Found at i:84139 original size:950 final size:948
Alignment explanation
Indices: 80763--98569 Score: 31046
Period size: 950 Copynumber: 18.8 Consensus size: 948
80753 GATCCTAACA
*
80763 GTTTTCTTTGTCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
80828 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
**
80893 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTTGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
80958 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
81023 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACAATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
81088 TTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
81153 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCTT
* *
81218 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATAGAAAACATTTATTTGCCCTATTTTCCTTAA
455 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAA
* * *
81283 AATCAAA-GCTTGACCCTTAAATAAGACAAGCATTGACTCTCATAACAGTCTCCAATCTTTTCAA
520 AAT-AAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
* * *
81347 GATTGGGAATCGAAAATACAATCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAG
584 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
*
81412 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAA
649 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
*
81477 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACA
714 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACA
81542 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAA
779 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAA
*
81607 ATGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGC
843 GTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGC
81672 ACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
907 ACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
81714 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTTAAATAAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
81779 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
81844 TCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
81909 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
81974 ATTTTAGGATTAGGCACCACAAACATAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
82039 TTGCAAGAAACACTTTCTCCCCACGAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
*
82104 AACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
82169 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTA
454 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTA
*
82234 AAATAATCGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
519 AAATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
82299 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
584 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
*
82364 AGAAGTTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
649 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
*
82429 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAATCACAGTCTTCTCGTAAGGACA
714 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACA
* *
82494 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTTTCCCCACCAATGTTTGTAAAGTCTAAA
779 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAG
* *
82559 TGCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCAT
844 TGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCAC
*
82624 TACAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
909 TATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
82664 GTTTTCTTTGGCATGGAAAA-TTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCTTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * * *
82728 ATAAGATAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCATGTTTGGAAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
82793 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAGGTTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
82858 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
82923 ATTTTAGGATTAGGCACCACAAACATAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
82988 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
**
83053 AACAAGGATTCAAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
83118 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTA
454 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTA
83183 AAATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
519 AAATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
83248 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
584 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
*
83313 AGAAGTTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
649 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
*
83378 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAATCACAGTCTTCTCGTAAGGACA
714 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACA
*
83443 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTTTCCCCACCAATGTTTGTAAAGTCTAAG
779 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAG
*
83508 TGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCATTTTGAGATAGGCAC
844 TGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCAC
*
83573 TATAAACACATTATCCTCTTTAGGGCAAATGTTATTGATG
909 TATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
*
83613 GTTTTCTTTGGCATGGAAAACTTTTACTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
83678 ATAAGACAAGCATTGATTCTCATAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
83743 TCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
83808 TTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
83873 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
83938 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
*
84003 AACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
*
84068 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTT
454 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTA
* * *
84133 AAATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCATAACAGTCTCAAATCTTTTCAT
519 AAATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
*
84198 GTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
584 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
* * *
84263 AGAAGCTTTTCTTCTTCCGTTATTAATAGAATCAAAGTTTGTCTCTTATATAAGACAAATATGAA
649 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* *
84328 TACTCATACAAATCCCTATTCATTTTAGGATTAGGCACCACAATCACAGTCTTCTCGTAAGGACA
714 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACA
* * *
84393 CACGATATTGATGCTTTGGTTTTGCAAGAATCACTTTTTCCCCACCAATGTTCGTAAAGTCTAAG
779 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAG
84458 TGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCAC
844 TGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCAC
* * *
84523 TATAAACACATTATCCTCTTTAGGGCAAATGTTACTGAAG
909 TATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
84563 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGCTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
84628 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
84693 TCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
84758 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
84823 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
84888 TTGCAAGAAACACTTTCTCCTCGCCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
*
84953 AACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCT
85018 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTA
454 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTA
*
85083 AAATAAACGTTTGACCCTCAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
519 AAATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
* *
85148 GATTGGGAATCGAAAATACAATCCGTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
584 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
*
85213 AGAAGCTTTTCTTCTTCCGTTATTGATAGATTCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
649 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
*
85278 TACTCATACTAATCCCTATTCATTATAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACA
714 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACA
* *
85343 CACGGA-ATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACCAATGTTTGTAAAGTCTAA
779 CAC-GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAA
*
85407 GTGTGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCA
843 GTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCA
*
85472 CTATAAACACATTATCCTCTTTAGGGCAAATGTTATTGATG
908 CTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
85513 GTTTTCTTTGGCATGGAAAACTTTTATTTGCGCTATTTTCCTTAAAATCAACGTTTGACCTTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
85578 ATAGGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAAATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
85643 TCCGTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
85708 ATTGATAGATTCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
85773 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
85838 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAATGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
85903 ACAAGGATTTGAACAATGATCTCCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
* *
85968 AGGGTAAATGTTATTGATGGTTTTCTTTGGCGTGGAAAACTTTTATTTGCGCTATTTTCCTTAAA
456 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
* * *
86033 ATCAACGTTTGACCTTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGT
521 ATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
* *
86098 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGGCATTGATGCTATGGTGTCACAAGAG
586 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
86163 AAGCTTTTCTT-TGTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
651 AAGCTTTTCTTCT-TCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* * * *
86227 ACACATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAACAAAGTCTTCTTGTAAGGACAC
715 ACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACAC
* * * * *
86292 ACAAAAATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACCAATGTTTGTAAAGTCTAAA
780 AC-GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAG
*
86357 TGCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCAC
844 TGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCAC
* *
86422 TATAAACACAATATCCTCTTTAAGGTAAATGTTATTGATG
909 TATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* * *
86462 GTTTTCTTTGGCGTGGAAAACTTTTATTTGCGCTATTTTCCTTAAAATCAACGTTTGACCTTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
86527 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* * *
86592 TCCCTTCATTAGGATACATGGCATTGATGCTTTGGTATCACAAGAGAAGCTTTTCTTCGTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
86657 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACACATACTAATCCCTACTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
86722 ATTTTAGGATTAGGCACCACAAACA-ATGTCTTCTTGTAAGGACACACGGA-ATTAATGCTTTGG
261 ATTTTAGGATTAGGCACCACAAACACA-GTCTTCTCGTAAGGACACAC-GATATTGATGCTTTGG
* *
86785 TTTTGCAAGAAACGCTTTCTCCCCACCAATGTTTGTAAAGTCTAAATGCGTGCCTCAAAAGAGAC
324 TTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGAC
* *
86850 AAACAAGGATTTGAACAATGATCTTCATTTGTTTTGAGATAGGCACTATAAACACAATATCCTCT
389 AAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCT
* *
86915 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCGTGGAAAACTTTTATTTGCGCTATTTTCCTTA
454 TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTA
* *
86980 AAATCAACGTTTGACCTTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
519 AAATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
* *
87045 GTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGGCATTGATGCTTTGGTGTCACAAG
584 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
*
87110 AGAAGCTTTTCTTCGTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
649 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* * * *
87175 TACACATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAACAAAGTCTTCTTGTAAGGACA
714 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACA
* * * *
87240 CACGGA-ATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACCAATTTTTTTAAAGTCTAA
779 CAC-GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAA
* * *
87304 GTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACACTGATCTTCATTCGTTTTGAGATTCGGC
843 GTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGC
87369 ACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
907 ACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
87411 GTTTTCTTTGGCATAGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * *
87476 ATAAGACAAGCATTGACTCTCATAACAGTCTCCAATCTTTTCAAGATTGGGAACCAAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* * *
87541 TCCCTTCATTACGATACATGACAATGATGCTTTGGGGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
87606 AGTGATAGAATCAAAGTTTGTGTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
87671 ATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
87736 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAATGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
87801 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
* *
87866 AGCGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCTTATTTTCCTTAAA
456 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
* *
87931 ATAAATGTTTGACCCTTAAATAAGACAAGCATTGATTCTCATAACAGTCTCCAATCTTTTCAAGA
521 ATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
*
87996 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGATGTCACAAGAG
586 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
*
88061 AAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAAA
651 AAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
88126 CTCATACTAATCCCTATTCATTTTAGGATTAGG-----------CAGTCTTCTCGTAAGGACACA
716 CTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACA
*
88180 CGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGG
781 CGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGT
* * *
88245 GCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATTGGCACT
845 GCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACT
* *
88310 ATAAACACATTATCCTTTTTAGGGCAAATGTTATTGATG
910 ATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
88349 GTTTTATTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAAGCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
88414 AAAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
88479 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCGTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
88544 ATTAATAGAGTCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
88609 ATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
88674 TTGCAAGAAACACTTTCTCCCCACTAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
88739 ACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
88804 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
456 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
*
88869 ATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
521 ATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
88934 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
586 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
* *
88999 AAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATA
651 AAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
*
89064 CTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACA
716 CTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACA
* *
89129 CGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTT
781 CGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTG
* *
89194 CGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATAGGCACTA
846 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTA
*
89259 TTAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
911 TAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
89297 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
89362 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACTGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
89427 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
89492 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
89557 ATTTTAGGATTAGG-----------CAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
89611 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
89676 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
89741 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAAC-TTTATTTGCCCTATTTTCCTTAA
455 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAA
* * * *
89805 AATCAAA-GTTTGGCCCTTAAATAAAACAAGCATTGACTCTCGTAACAGTCTCCAACCTTTTCAA
520 AAT-AAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
*
89869 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGGCATTGATGCTTTGGTGTCACAAG
584 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
89934 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
649 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
*
89999 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACA
714 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACA
*
90064 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACTAATGTTTGTAAAGTCTAAG
779 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAG
* * *
90129 TGCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATTGGCAC
844 TGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCAC
* *
90194 TATAAACACATTATCCTTTTTAGGGCAAATGTTATTGATG
909 TATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
90234 GTTTTATTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAAGCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
90299 AAAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
90364 TCCCTTCATTAGGATACATGACATTGATGCTTTGATGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* *
90429 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACGTGAAAACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
90494 ATTTTAGGATTAGG-----------CAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
*
90548 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGGGCGTGCCTCAAAAGAGACA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACA
* *
90613 AACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATAGGCACTATTAACACATTATCCTCTT
390 AACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTT
90678 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAA
455 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAA
*
90743 AATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAG
520 AATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAG
*
90808 ATTGGGAACTGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGA
585 ATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGA
*
90873 GAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAA
650 GAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
*
90938 ACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACAC
715 ACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACAC
*
91003 ACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACTAATGTTTGTAAAGTCTAAGT
780 ACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGT
91068 GCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACT
845 GCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACT
91133 ATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
910 ATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
91172 GTTTTATTTGGCATAGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
91237 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
91302 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTCTTTCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
* * *
91367 ACTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAGAAGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
91432 ATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
91497 TTGCAAGAAACACTTTCTCCCCACCAGTTTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
91562 ACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
91627 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
456 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
*
91692 ATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
521 ATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
* *
91757 TTGGGAACGGAAAATACAATCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
586 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
91822 AAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
651 AAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
*
91887 CTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACACA
716 CTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACA
* * * *
91952 CGATATTGATGCTTTGGTTTTGTAAGAAACACTTTCTCCCCACTAATTTTTGTAAAGTCTAAGTT
781 CGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTG
* *
92017 CGTGCCTCAAAATAGACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTA
846 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTA
92082 TAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
911 TAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
*
92120 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCTACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
92185 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACTGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
92250 TCCCTTCATTAGGATACAGGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
92315 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
92380 ATTTTAGAATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
92445 TTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* *
92510 ACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATAGGCACTATAGACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTC---
92575 AGGGTAAATGTTATTGATGGTTTTCATTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAA
453 -----------------------T--TTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAA
* * *
92640 AACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTTTAACCCTTAAATAAGACAAGCATTGATT
493 AACTTTTATTTGCCCTATTTTCCTTAAAATAAACGTTTGACCCTTAAATAAGACAAGCATTGATT
* * *
92705 CTCGTAACAGTCTCGAATCTTTTCAAGATTGGGAACTGAAAATACAATCCCTTCGTTAGGATACA
558 CTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACA
* *
92770 TGACATTAATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTT
623 TGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTT
92835 TGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGG----
688 TGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACC
92896 -------CAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCT
753 ACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCT
*
92954 CCCCACCAATGTTTGTAAAGTCTTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAAT
818 CCCCACCAATGTTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAAT
93019 GATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGA
882 GATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGA
93084 TG
947 TG
*
93086 GTTTTCTTTGGCATGGAAAAC-TTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
93150 ATAAGACAAGCATTGACTCTCGTAACAGTCTCCAACCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
93215 TCCCTTCATTAGGATACATGGCATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
93280 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
*
93345 ATTTTAGGATTAGGCACCACAAACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
93410 TTGCAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
93475 ACAAGGATTTGAACAATGATCTTCATTCATTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
93540 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
456 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
*
93605 ATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
521 ATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
93670 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
586 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
* * * *
93735 AAGCTTTTCTT-TGTCGGTTATCGATAGAATCGAAGTTGGTCTCTTAAATAAGACAAACATGAAT
651 AAGCTTTTCTTCT-TCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
*
93799 ACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACAC
715 ACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACAC
* * * *
93864 ATGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACCAAT-TCTTTTAAAGTCTAAG
780 ACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGT-TTGTAAAGTCTAAG
* * *
93928 TTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAAATTTGGCA
844 TGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGCA
93993 CTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
908 CTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
94034 GTTTTCTTTGGCAAGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
94099 ATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
94164 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTCCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
94229 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* * * *
94294 ATTTTAGGATTAGGCACCACAAACATAGTCTTCTCGTAAGGATACACGATATTAATACTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * *
94359 TTGCAAGAAACGCTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* *
94424 ACAAGGATTTGAACAATCATCTTCATTCGTTTTCAGATTAGGCACTATAAACACATTATCCTCTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCTT
*
94489 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAA
455 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAA
* * *
94554 AATCAAA-GTTTGACCCTTAAATAAGACAAGTATTGACTCTCGTAATAGTCTCCAATCTTTTCAA
520 AAT-AAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
* *
94618 GTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGGCATTGATGCTTTGGTGTCACAAG
584 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
94683 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
649 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* *
94748 TACTCATACTAATCCCTATTCATTTTAGGATTATGCACCATAAACACAGTCTTCTCGTAAGGACA
714 TACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACA
94813 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAG
779 CACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAG
* *
94878 TTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCATTTTGAGATTAGGCA
844 TGCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGCA
94943 CTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
908 CTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
94984 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATAAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* * *
95049 ATAAGACAAGCATTGATTCTCGTAACAGTCTCGAATCTTTTGAAGATTGGGAACTGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
* *
95114 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAGAAGAGAAGCTTTTCTTCTCCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
95179 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* * *
95244 ATTTTAGGATTAGGCACCACAATCATAGTCTTCTCCTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* *
95309 TTGCAAGAAACGCTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
* * *
95374 ACAAGGATTCGAACAATGATCTTTATTCGTTTTGAGATAGGAACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
*
95439 AGGGCAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
456 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
* * *
95504 ATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCATAACAGTCTCTAATCTTTTCAAGA
521 ATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
* * *
95569 TTGGGAACCGAAAATACATTCCCTTCATTACGATACATGACAATGATGCTTTGGTGTCACAAGAG
586 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
*
95634 AAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTTTCTCTTAAATAAGACAAACATGAATA
651 AAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
*
95699 CTAATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACA
716 CTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACA
* *
95764 CGATATTGATGCTTTTGTTTTCCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTTAAGT
781 CGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGT
* *
95829 GCGTCCCTCAAAAGAGACAAACAAGGATTCGATCAATGATCTTCATTCGTTTTGAGATTAGGCAC
845 GCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGCAC
95894 TATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
909 TATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
95934 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
*
95999 ATAAGACAAGCATTGATTCTCGTAACTGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
96064 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAGGCTTTTCTTCTTCCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
96129 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
96194 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * *
96259 TTGCAAGAAACACTTTCTCCCCACCAATTTTTTTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
*
96324 ACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
* *
96389 AGGGTAAATGTTATTGGTGGTTTTCTTTGGCATAGAAAACTTTTATTTGCCCTATTTTCCTTAAA
456 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
*
96454 ATCAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
521 ATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
96519 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
586 TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
* *
96584 AAGCTTTTCTTCGTCCGTTATTGATAGAATCAGAGTTTGTCTCTTAAATAAGACAAACATGAATA
651 AAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
*
96649 CTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGCCTTCTCGTAAGGACACA
716 CTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACA
*
96714 CGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACTAATGTTTGTAAAGTCTAAGTG
781 CGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTG
*
96779 CGTGCCTCAAAAGAGGCAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTA
846 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTA
96844 TAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
911 TAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
*
96882 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCATAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
96947 ATAAGAAAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGAAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
97012 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
97077 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCTATTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
97142 ATTTTAGGATTAGGCACCACACACACAGTGTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * * *
97207 TTGTAAGAAACACTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAATAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
97272 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
* *
97337 AGGGTAAATGTTGTTGATGGTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
456 AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
97402 ATCAAA-GTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAG
521 AT-AAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAG
*
97466 ATTGGGAACCGAAAATACAATCCCTACATTAGGATACATGACATTGATGCTTTGGTGTCACAAGA
585 ATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGA
*
97531 GAAGCTTTTCTTCGTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
650 GAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* *
97596 ACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCAC-AA-ACAGTCTTCTCGTAAGGATAC
715 ACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACAC
* * * * * *
97659 ACGATATTAATGCTTTGGTTTTGCCAGAAACGCTTTCT-CCCAACAGTTTTTGTAAAGTCTAAGT
780 ACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGT
* *
97723 TCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATTAGGCAC
845 GCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGA-TAGGCAC
97788 TATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
909 TATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
* *
97828 GTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAA
1 GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
* *
97893 ATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGTTTGGGAACCGAAAATACAA
66 ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
*
97958 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGAT
131 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
*
98023 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTC
196 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
* *
98088 ATTTTAGGATTAGGCACCAC-AA-ACAGTCTTCTCGTAAGGATACACGATATTAATGCTTTGGTT
261 ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
* * * * * *
98151 TTGCCAGAAACGCTTTCT-CCCAACAGTTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAA
326 TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
98215 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTT
391 ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGA-TAGGCACTATAAACACATTATCCTCTT
*
98280 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAA
455 TAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAA
*
98345 AATCAAA-GTTTGACCCTTAAATAAGATAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
520 AAT-AAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAA
*
98409 GCTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
584 GATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
*
98474 AAAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
649 AGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
*
98539 TACTCATACTAATCCCTACTCATTTTAGGAT
714 TACTCATACTAATCCCTATTCATTTTAGGAT
98570 ACCTCATACG
Statistics
Matches: 16164, Mismatches: 599, Indels: 193
0.95 0.04 0.01
Matches are distributed among these distances:
936 1 0.00
937 1271 0.08
938 1661 0.10
939 58 0.00
943 80 0.00
944 362 0.02
945 77 0.00
946 370 0.02
947 63 0.00
948 2744 0.17
949 3641 0.23
950 4047 0.25
951 422 0.03
952 456 0.03
965 495 0.03
966 128 0.01
974 1 0.00
976 287 0.02
ACGTcount: A:0.32, C:0.19, G:0.16, T:0.34
Consensus pattern (948 bp):
GTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAACGTTTGACCCTTAA
ATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAA
TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTT
ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTC
ATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTT
TTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAA
ACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATAGGCACTATAAACACATTATCCTCTTT
AGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAA
ATAAACGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGA
TTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
AAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
CTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACA
CGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTG
CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATAGGCACTA
TAAACACATTATCCTCTTTAGGGTAAATGTTATTGATG
Found at i:92613 original size:28 final size:28
Alignment explanation
Indices: 92573--92627 Score: 110
Period size: 28 Copynumber: 2.0 Consensus size: 28
92563 ATTATCCTCT
92573 TTAGGGTAAATGTTATTGATGGTTTTCA
1 TTAGGGTAAATGTTATTGATGGTTTTCA
92601 TTAGGGTAAATGTTATTGATGGTTTTC
1 TTAGGGTAAATGTTATTGATGGTTTTC
92628 TTTGGCATGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
28 27 1.00
ACGTcount: A:0.24, C:0.04, G:0.25, T:0.47
Consensus pattern (28 bp):
TTAGGGTAAATGTTATTGATGGTTTTCA
Found at i:99453 original size:476 final size:475
Alignment explanation
Indices: 98722--99672 Score: 1697
Period size: 476 Copynumber: 2.0 Consensus size: 475
98712 CCATTTTTGA
*
98722 TAGGCACCACAAACATAGTCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTTGCAAGAAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTTGCAAGAAA
* * * *
98787 CGCTTTCTCCCCACCAATTCTTTTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
66 CACATTCTCCCCACCAATTCTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTC
98852 GAACAATGATCTTCATTCATTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
131 GAACAATGATCTTCATTCATTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
98917 GTTATTGATGGTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
196 GTTATTGATGGTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
* *
98982 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGTTTAGGAACC
261 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTAGGAACC
99047 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
326 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
* *
99112 TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
391 TTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGAATACTCATACTA
*
99177 ATCCCTATTCATTTTAGGAT
456 ATCCCTACTCATTTTAGGAT
* * *
99197 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTTGTTTTGCAAGAAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTTGCAAGAAA
*
99262 CACATTCTCCCCACCAATGT-TTGTAAAGTCTTCAGTGCGTGCCTCAAAAGAGACAAACAAGGAT
66 CACATTCTCCCCACCAAT-TCTTGTAAAGTC-TAAGTGCGTGCCTCAAAAGAGACAAACAAGGAT
* * *
99326 TTGAACAATGATCTTCATTCGTTTTGATATTAGGCACTATAAACACATTATCCTCTTTAGGGTAA
129 TCGAACAATGATCTTCATTCATTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAA
*
99391 ATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAG
194 ATGTTATTGATGGTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAG
*
99456 TTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAA
259 TTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTAGGAA
*
99521 CCGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTT
324 CCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTT
99586 TCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGAATACTCATAC
389 TCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGAATACTCATAC
99651 TAATCCCTACTCATTTTAGGAT
454 TAATCCCTACTCATTTTAGGAT
99673 ACCTCATACG
Statistics
Matches: 454, Mismatches: 20, Indels: 3
0.95 0.04 0.01
Matches are distributed among these distances:
475 86 0.19
476 368 0.81
ACGTcount: A:0.32, C:0.20, G:0.15, T:0.34
Consensus pattern (475 bp):
TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTTGCAAGAAA
CACATTCTCCCCACCAATTCTTGTAAAGTCTAAGTGCGTGCCTCAAAAGAGACAAACAAGGATTC
GAACAATGATCTTCATTCATTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
GTTATTGATGGTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTAGGAACC
GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
TTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGAATACTCATACTA
ATCCCTACTCATTTTAGGAT
Found at i:100556 original size:476 final size:475
Alignment explanation
Indices: 99825--103635 Score: 6621
Period size: 475 Copynumber: 8.0 Consensus size: 475
99815 CCATTTTTGA
* *
99825 TAGGCACCACAAACATAGTCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTTGCAAGAAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAA
* *
99890 CGCTTTCTCCCCACCAAT-TCTTTTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATT
66 CACTTTCTCCCCACCAATGT-TTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATT
* *
99954 CGAACAATGATCTTCATTCATTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
130 CGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
*
100019 TGTTATTGATGGTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
195 TGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
* * *
100084 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGTTTAGGAAC
260 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAAC
*
100149 CGAAAATACAATCCCCTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
325 CGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
100214 CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
390 CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
100279 AATCCCTATTCATTTTAGGAT
455 AATCCCTATTCATTTTAGGAT
* *
100300 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTTGTTTTGCAAGAAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAA
* * *
100365 CACATTCTCCCCACCAATGTTTGTAAAGTCTTCAGTGCGTGCCTCAAAAGAGACAAACAAGGATT
66 CACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTTCGTGCCTCAAAAGAGACAAACAAGGATT
*
100430 CGAACAATGATCTTCATTCGTTTTGATATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
130 CGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
100495 TGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
195 TGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
100560 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAAC
260 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAAC
*
100625 CGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
325 CGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
* * *
100690 CTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGAATACTAATACT
390 CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
100755 AATCCCTATTCATTTTAGGAT
455 AATCCCTATTCATTTTAGGAT
* * * *
100776 TAGGCACGACAAACACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAA
100841 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
66 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
100906 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
131 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
*
100971 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTT
196 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
* * *
101036 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAATCTCTAATCTTTTCAAGTTTGGGAACC
261 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACC
101101 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
326 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
* *
101166 TTCTTTCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAAACTA
391 TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
*
101231 ATCCCTACTCATTTTAGGAT
456 ATCCCTATTCATTTTAGGAT
*
101251 TAGGCACCAC-AA-ACAGTCTTCTCGTAAGGATACACGATATT-AATGCTTTGGTTTTGCAAGAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAA-GCTTTGGTTTTGCAAGAA
** * *
101313 ATGCTTTCTGCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATT
65 ACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATT
* *
101378 TGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTCTAGGGTAAA
130 CGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
*
101443 TGTTATTGATGGTTTTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
195 TGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
* * *
101508 TTGACCCTTAAATAAGATAAGCATTGATTCTCGTAACAGGCTCCAATCTTTTCAAGCTTGGGAAC
260 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAAC
*
101573 CGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTT
325 CGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
101638 CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
390 CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
*
101703 AATCCCTACTCATTTTAGGAT
455 AATCCCTATTCATTTTAGGAT
* * *
101724 TAGGCACCACAAACATAGTCTTCTCGTAAGTACACACGATATTAAAGCTTTGGTTTTGCAAGAAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAA
* * *
101789 CGCTTTCTCCCCACCAATGTTTGTAAAGTCTTCAGTGCGTGCCTCAAAAGAGACAAACAAGGATT
66 CACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTTCGTGCCTCAAAAGAGACAAACAAGGATT
*
101854 CGAACAATGATCTTCATTCGTTTTGATATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
130 CGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
101919 TGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
195 TGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
101984 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAAC
260 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAAC
*
102049 CGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
325 CGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
* * * *
102114 CTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGTATACTAATACT
390 CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
102179 AATCCCTATTCATTTTAGGAT
455 AATCCCTATTCATTTTAGGAT
* * * *
102200 TAGGCACGACAAACACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAA
102265 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
66 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
102330 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
131 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
*
102395 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTT
196 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
*
102460 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTGGGAACC
261 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACC
*
102525 GAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
326 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
* * *
102590 TTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGAATACTAATACTA
391 TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
102655 ATCCCTATTCATTTTAGGAT
456 ATCCCTATTCATTTTAGGAT
* * * *
102675 TAGGCACGACAAACACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAA
102740 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
66 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
102805 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
131 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
*
102870 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTT
196 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
*
102935 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTGGGAACC
261 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACC
103000 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
326 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
103065 TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
391 TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
103130 ATCCCTATTCATTTTAGGAT
456 ATCCCTATTCATTTTAGGAT
*
103150 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAA
1 TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAA
*
103215 CACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
66 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
*
103280 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACATATTATCCTCTTTAGGGTAAAT
131 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
103345 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
196 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
* * * *
103410 TGACCCTTAAATAAGACAAGCATTGATTCTCATAACAGTCTCCAAACGTTTCAAGATTGGGAGCC
261 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACC
* * * * * * *
103475 AAAAACACATTCCCTTTATTAGGATACATGACAATAATGCTTTGGTATCGA-AAGAGAAGCTTTT
326 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC-ACAAGAGAAGC-TTT
* * * * * * *
103539 TCTT-TCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGT
389 TCTTCTTC-C-GTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAT
*
103603 ACTAA-GCCTCATTC-TTTTCAGGAT
452 ACTAATCCCT-ATTCATTTT-AGGAT
103627 TAGGCACCA
1 TAGGCACCA
103636 TAAGCATAAT
Statistics
Matches: 3193, Mismatches: 130, Indels: 24
0.95 0.04 0.01
Matches are distributed among these distances:
472 2 0.00
473 448 0.14
474 4 0.00
475 1743 0.55
476 925 0.29
477 71 0.02
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.33
Consensus pattern (475 bp):
TAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAA
CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAACC
GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
ATCCCTATTCATTTTAGGAT
Found at i:101072 original size:951 final size:950
Alignment explanation
Indices: 99825--103635 Score: 6675
Period size: 951 Copynumber: 4.0 Consensus size: 950
99815 CCATTTTTGA
* * *
99825 TAGGCACCACAAACATAGTCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTTGCAAGAAA
1 TAGGCACCACAAACACAATCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTCGCAAGAAA
* *
99890 CGCTTTCTCCCCACCAAT-TCTTTTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATT
66 CACTTTCTCCCCACCAATGT-TTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATT
* *
99954 CGAACAATGATCTTCATTCATTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
130 CGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
*
100019 TGTTATTGATGGTTTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
195 TGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
* *
100084 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGTTTAGGAAC
260 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTGGGAAC
*
100149 CGAAAATACAATCCCCTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
325 CGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
100214 CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
390 CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
100279 AATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTG
455 AATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTG
* * * *
100344 ATGCTTTTGTTTTGCAAGAAACACATTCTCCCCACCAATGTTTGTAAAGTCTTCAGTGCGTGCCT
520 ATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTTCGTGCCT
*
100409 CAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGATATTAGGCACTATAAACA
584 CAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACA
100474 CATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCC
649 CATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCC
100539 TATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCC
714 TATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCC
100604 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTT
779 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTT
100669 GGTGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAG
844 GGTGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAG
100734 ACAAACATGAATACTAATACTAATCCCTATTCATTTTAGGAT
909 ACAAACATGAATACTAATACTAATCCCTATTCATTTTAGGAT
* * *
100776 TAGGCACGACAAACACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAA
1 TAGGCACCACAAACACAATCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTCGCAAGAAA
100841 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
66 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
100906 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
131 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
*
100971 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTT
196 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
* *
101036 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAATCTCTAATCTTTTCAAGTTTGGGAACC
261 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTGGGAACC
101101 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
326 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
* *
101166 TTCTTTCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAAACTA
391 TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
* * *
101231 ATCCCTACTCATTTTAGGATTAGGCACCAC-AA-ACAGTCTTCTCGTAAGGATACACGATATTAA
456 ATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGA
** * *
101294 TGCTTTGGTTTTGCAAGAAATGCTTTCTGCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCA
521 TGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCA
*
101359 AAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACA
586 AAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACA
* *
101424 TTATCCTCTCTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGAAAAACTTTTATTTGCCCTA
651 TTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTA
* *
101489 TTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGATAAGCATTGATTCTCGTAACAGGCTCCAA
716 TTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAA
* *
101554 TCTTTTCAAGCTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGG
781 TCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTGG
* * *
101619 TGTCACAAGAAAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
846 TGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGAC
* *
101684 AAACATGAATACTCATACTAATCCCTACTCATTTTAGGAT
911 AAACATGAATACTAATACTAATCCCTATTCATTTTAGGAT
* * * *
101724 TAGGCACCACAAACATAGTCTTCTCGTAAGTACACACGATATTAAAGCTTTGGTTTTGCAAGAAA
1 TAGGCACCACAAACACAATCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTCGCAAGAAA
* * *
101789 CGCTTTCTCCCCACCAATGTTTGTAAAGTCTTCAGTGCGTGCCTCAAAAGAGACAAACAAGGATT
66 CACTTTCTCCCCACCAATGTTTGTAAAGTC-TAAGTTCGTGCCTCAAAAGAGACAAACAAGGATT
*
101854 CGAACAATGATCTTCATTCGTTTTGATATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
130 CGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAA
101919 TGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
195 TGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGT
*
101984 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGATTGGGAAC
260 TTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTGGGAAC
*
102049 CGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
325 CGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
* * * *
102114 CTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGTATACTAATACT
390 CTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
* * *
102179 AATCCCTATTCATTTTAGGATTAGGCACGACAAACACAATGTTCTCGTAAGGACACACGATATTG
455 AATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTG
* *
102244 AAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTC
520 ATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTC
102309 AAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACAC
585 AAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACAC
102374 ATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCT
650 ATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCT
* *
102439 ATTTTCCTTAAAATCAATGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTA
715 ATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCA
102504 ATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTG
780 ATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTG
102569 GTGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGA
845 GTGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGA
102634 CAAACATGAATACTAATACTAATCCCTATTCATTTTAGGAT
910 CAAACATGAATACTAATACTAATCCCTATTCATTTTAGGAT
* * *
102675 TAGGCACGACAAACACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAA
1 TAGGCACCACAAACACAATCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTCGCAAGAAA
102740 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
66 CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
102805 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
131 GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
*
102870 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTT
196 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
102935 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTGGGAACC
261 TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTGGGAACC
103000 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
326 GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
103065 TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
391 TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
103130 ATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGA
456 ATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGA
*
103195 TGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCGTGCCTCA
521 TGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCA
*
103260 AAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACATA
586 AAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACA
103325 TTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTA
651 TTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTA
*
103390 TTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGATTCTCATAACAGTCTCCAA
716 TTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAA
* * * * * * * *
103455 ACGTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACAATAATGCTTTGG
781 TCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTGG
* * * * *
103520 TATCGA-AAGAGAAGC-TTT-TTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAAT
846 TGTC-ACAAGAGAAGCTTTTCTTC-TTCCA---TTATTGATAGAATCAAAGTTTGTCTCTTAAAA
* * ** *
103582 AAGGCAAATATGAATACTCGTACTAA-GCCTCATTC-TTTTCAGGAT
906 AAGACAAACATGAATACTAATACTAATCCCT-ATTCATTTT-AGGAT
103627 TAGGCACCA
1 TAGGCACCA
103636 TAAGCATAAT
Statistics
Matches: 2713, Mismatches: 136, Indels: 21
0.95 0.05 0.01
Matches are distributed among these distances:
948 455 0.17
949 455 0.17
950 738 0.27
951 997 0.37
952 68 0.03
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.33
Consensus pattern (950 bp):
TAGGCACCACAAACACAATCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTCGCAAGAAA
CACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTC
GAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAAT
GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
TGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCTAATCTTTTCAAGATTGGGAACC
GAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTC
TTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
ATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACGATATTGA
TGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCA
AAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATAAACACA
TTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTA
TTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCAA
TCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTTATTAGGATACATGACATTGATGCTTTGG
TGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGAC
AAACATGAATACTAATACTAATCCCTATTCATTTTAGGAT
Found at i:102876 original size:158 final size:156
Alignment explanation
Indices: 99862--103352 Score: 412
Period size: 158 Copynumber: 22.1 Consensus size: 156
99852 AAGGACACAC
* * * *
99862 GATATTAAAGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACCAATTCTTTTAAAGTCTAAGTTC
1 GATATTGAAGCTTTGGTTTCGCAAGAAA-ACTTTCTCCCCACCAATT-TTGTAAAGTCTAAGTTC
* * *
99927 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT-TCATTCATTTTGAAATTAGGCACT
64 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCT-ATTCGTTTTGAGATTAGGCACG
*
99991 ATAAACACATTATCCTCTTTAGGGTAAAT
128 ATAAACACATTATCCTCTTTAGGATAAAT
* * * *** * * * *** * * * *
100020 GTTATTGATGGTTTTCCTTGGCATGGAAAACTTTTATTTGC-CCTATTTTCCTTAAAATCAAAGT
1 GATATTGAAGCTTTGGTTTCGCA-AGAAAAC-TTTCTCCCCACCAATTTT--GTAAAGTCTAAGT
* ** * * ** * * *
100084 TTGACCCTTAAATA-AGACAAGCATTGATTCTCGTAAC-A-G-TCTCTAATC-TTTTCAAGTTTA
62 TCGTGCCTCAAA-AGAGACAAACAAGGA-T-TCG-AACAATGATCTCTATTCGTTTT-GAGATTA
* * * ** * *
100144 GGAACCGA-AAATACAATCCCCTCATTAGGATACAT
122 GGCA-CGATAAACACATTATCCTCTTTAGGATAAAT
* * * * * * ** * *
100179 GACATTGATGCTTTGGTGTCACAAGAGAAGCTTT-TCTTCTTCC-GTTATTGATAGAA-TCAAAG
1 GATATTGAAGCTTTGGTTTCGCAAGA-AAACTTTCTC-CCCACCAATT-TTG-TA-AAGTCTAAG
* * * * * ** * * * * *
100241 TTTGT-CTCTTAAATA-AGACAAACATGAATACTCATACTAATCCCTATTCATTTT-AGGATTAG
61 TTCGTGC-CTCAAA-AGAGACAAACAAGGATTCGAACAATGATCTCTATTCGTTTTGA-GATTAG
* * * * * * * * * *
100303 GCACCACAAACACAGTCTTCTCGTAAGGACACAC
123 GCACGATAAACACATTATCCTCTTTAGGATAAAT
* * * * * *
100337 GATATTGATGCTTTTGTTTTGCAAGAAACACATTCTCCCCACCAATGTTTGTAAAGTCTTCAGTG
1 GATATTGAAGCTTTGGTTTCGCAAGAAA-ACTTTCTCCCCACCAAT-TTTGTAAAGTC-TAAGTT
*
100402 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT-TCATTCGTTTTGATATTAGGCAC
63 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCT-ATTCGTTTTGAGATTAGGCAC
* *
100466 TATAAACACATTATCCTCTTTAGGGTAAAT
127 GATAAACACATTATCCTCTTTAGGATAAAT
* * * ** * * * *** * * * *
100496 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGC-CCTATTTTCCTTAAAATCAAAGT
1 GATATTGAAGCTTTGGTTTCGCA-AGAAAAC-TTTCTCCCCACCAATTTT--GTAAAGTCTAAGT
* ** * * ** * * * *
100560 TTGACCCTTAAATA-AGACAAGCATTGATTCTCGTAAC-A-G-TCTCCAATC-TTTTCAAGATTG
62 TCGTGCCTCAAA-AGAGACAAACAAGGA-T-TCG-AACAATGATCTCTATTCGTTTT-GAGATTA
* * * *
100620 GGAACCGA-AAATACA--ATCCCTTTATTAGGATACAT
122 GGCA-CGATAAACACATTAT-CCTCT-TTAGGATAAAT
* * * * * * ** *
100655 GACATTGATGCTTTGGTGTCACAAGAGAAGCTTT-TCTTCTTCC-ATTATTGATAGAA-TCAAAG
1 GATATTGAAGCTTTGGTTTCGCAAGA-AAACTTTCTC-CCCACCAATT-TTG-TA-AAGTCTAAG
* * * * * * * * * * * *
100717 TTTGT-CTCTTAAAAAAGACAAACATGAATACTAATACTAATCCCTATTCATTTT-AGGATTAGG
61 TTCGTGC-CTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCTATTCGTTTTGA-GATTAGG
* * * * * * * * *
100780 CACGACAAACACAATGTTCTCGTAAGGACACAC
124 CACGATAAACACATTATCCTCTTTAGGATAAAT
100813 GATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTC
1 GATATTGAAGCTTTGGTTTCGCAAGAAA-ACTTTCTCCCCACCAAT-TTTGTAAAGTCTAAGTTC
*
100878 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT-TCATTCGTTTTGAGATTAGGCACT
64 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCT-ATTCGTTTTGAGATTAGGCACG
*
100942 ATAAACACATTATCCTCTTTAGGGTAAAT
128 ATAAACACATTATCCTCTTTAGGATAAAT
* * * ** * * * *** * * *
100971 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGC-CCTATTTTCCTTAAAATC-AATG
1 GATATTGAAGCTTTGGTTTCGCA-AGAAAAC-TTTCTCCCCACCAATTTT--GTAAAGTCTAA-G
* ** * * ** * * *
101034 TTTGACCCTTAAATA-AGACAAGCATTGATTCTCGTAAC-A--ATCTCTAATC-TTTTCAAGTTT
61 TTCGTGCCTCAAA-AGAGACAAACAAGGA-T-TCG-AACAATGATCTCTATTCGTTTT-GAGATT
* * * * *
101094 GGGAACCGA-AAATACA--ATCCCTTCATTAGGATACAT
121 AGGCA-CGATAAACACATTAT-CC-TCTTTAGGATAAAT
* * * * * * *** * *
101130 GACATTGATGCTTTGGTGTCACAAGAGAAGCTTT-TCTTCTTTC-GTTATTGATAGAA-TCAAAG
1 GATATTGAAGCTTTGGTTTCGCAAGA-AAACTTTCTC-CCCACCAATT-TTG-TA-AAGTCTAAG
* * * * * * * * *
101192 TTTGT-CTCTTAAATA-AGACAAACATGAATACTC-AA-ACTAATCCCTACTCATTTT-AGGATT
61 TTCGTGC-CTCAAA-AGAGACAAACAAGGAT--TCGAACAATGATCTCTATTCGTTTTGA-GATT
* * * * * * *
101252 AGGCACCACAAACA-GTCT-T-CTCGTAAGGATACAC
121 AGGCACGATAAACACAT-TATCCTCTTTAGGATAAAT
* * *
101286 GATATT-AATGCTTTGGTTTTGCAAGAAATGCTTTCTGCCCACCAATTTTTGTAAAGTCTAAGTT
1 GATATTGAA-GCTTTGGTTTCGCAAGAAA-ACTTTCTCCCCACCAA-TTTTGTAAAGTCTAAGTT
*
101350 CGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCT-TCATTCGTTTTGAGATTAGGCAC
63 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCT-ATTCGTTTTGAGATTAGGCAC
* * *
101414 TATAAACACATTATCCTCTCTAGGGTAAAT
127 GATAAACACATTATCCTCTTTAGGATAAAT
* * * ** * * * *** * * * *
101444 GTTATTGATGGTTTTCTTTGGCATGAAAAACTTTTATTTGC-CCTATTTTCCTTAAAATCAAAGT
1 GATATTGAAGCTTTGGTTTCGCAAG-AAAAC-TTTCTCCCCACCAATTTT--GTAAAGTCTAAGT
* ** * * * ** * * * * * *
101508 TTGACCCTTAAATA-AGATAAGCATTGATTCTCGTAAC-A-G-GCTCCAATC-TTTTCAAGCTTG
62 TCGTGCCTCAAA-AGAGACAAACAAGGA-T-TCG-AACAATGATCTCTATTCGTTTT-GAGATTA
* * * *
101568 GGAACCGA-AAATACA--ATCCCTTCATTAGGATACAT
122 GGCA-CGATAAACACATTAT-CC-TCTTTAGGATAAAT
* * * * * ** * *
101603 GACATTGATGCTTTGGTGTCACAAGAAAAGCTTT-TCTTCTTCC-GTTATTGATAGAA-TCAAAG
1 GATATTGAAGCTTTGGTTTCGCAAGAAAA-CTTTCTC-CCCACCAATT-TTG-TA-AAGTCTAAG
* * * * * ** * * * * * *
101665 TTTGT-CTCTTAAATA-AGACAAACATGAATACTCATACTAATCCCTACTCATTTT-AGGATTAG
61 TTCGTGC-CTCAAA-AGAGACAAACAAGGATTCGAACAATGATCTCTATTCGTTTTGA-GATTAG
* * * * * * * * * * * *
101727 GCACCACAAACATAGTCTTCTCGTAAGTACACAC
123 GCACGATAAACACATTATCCTCTTTAGGATAAAT
* * * * *
101761 GATATTAAAGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACCAATGTTTGTAAAGTCTTCAGTG
1 GATATTGAAGCTTTGGTTTCGCAAGAAA-ACTTTCTCCCCACCAAT-TTTGTAAAGTC-TAAGTT
*
101826 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT-TCATTCGTTTTGATATTAGGCAC
63 CGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCT-ATTCGTTTTGAGATTAGGCAC
* *
101890 TATAAACACATTATCCTCTTTAGGGTAAAT
127 GATAAACACATTATCCTCTTTAGGATAAAT
* * * ** * * * *** * * * *
101920 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGC-CCTATTTTCCTTAAAATCAAAGT
1 GATATTGAAGCTTTGGTTTCGCA-AGAAAAC-TTTCTCCCCACCAATTTT--GTAAAGTCTAAGT
* ** * * ** * * * *
101984 TTGACCCTTAAATA-AGACAAGCATTGATTCTCGTAAC-A-G-TCTCCAATC-TTTTCAAGATTG
62 TCGTGCCTCAAA-AGAGACAAACAAGGA-T-TCG-AACAATGATCTCTATTCGTTTT-GAGATTA
* * * *
102044 GGAACCGA-AAATACA--ATCCCTTTATTAGGATACAT
122 GGCA-CGATAAACACATTAT-CCTCT-TTAGGATAAAT
* * * * * * ** *
102079 GACATTGATGCTTTGGTGTCACAAGAGAAGCTTT-TCTTCTTCC-ATTATTGATAGAA-TCAAAG
1 GATATTGAAGCTTTGGTTTCGCAAGA-AAACTTTCTC-CCCACCAATT-TTG-TA-AAGTCTAAG
* * * * * * * * * * * *
102141 TTTGT-CTCTTAAAAAAGACAAACATGTATACTAATACTAATCCCTATTCATTTT-AGGATTAGG
61 TTCGTGC-CTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCTATTCGTTTTGA-GATTAGG
* * * * * * * * *
102204 CACGACAAACACAATGTTCTCGTAAGGACACAC
124 CACGATAAACACATTATCCTCTTTAGGATAAAT
102237 GATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTC
1 GATATTGAAGCTTTGGTTTCGCAAGAAA-ACTTTCTCCCCACCAAT-TTTGTAAAGTCTAAGTTC
*
102302 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT-TCATTCGTTTTGAGATTAGGCACT
64 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCT-ATTCGTTTTGAGATTAGGCACG
*
102366 ATAAACACATTATCCTCTTTAGGGTAAAT
128 ATAAACACATTATCCTCTTTAGGATAAAT
* * * ** * * * *** * * *
102395 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGC-CCTATTTTCCTTAAAATC-AATG
1 GATATTGAAGCTTTGGTTTCGCA-AGAAAAC-TTTCTCCCCACCAATTTT--GTAAAGTCTAA-G
* ** * * ** * *
102458 TTTGACCCTTAAATA-AGACAAGCATTGATTCTCGTAAC-A-G-TCTCTAATC-TTTTCAAGATT
61 TTCGTGCCTCAAA-AGAGACAAACAAGGA-T-TCG-AACAATGATCTCTATTCGTTTT-GAGATT
* * * * *
102518 GGGAACCGA-AAATACA--ATCCCTTTATTAGGATACAT
121 AGGCA-CGATAAACACATTAT-CCTCT-TTAGGATAAAT
* * * * * * ** *
102554 GACATTGATGCTTTGGTGTCACAAGAGAAGCTTT-TCTTCTTCC-ATTATTGATAGAA-TCAAAG
1 GATATTGAAGCTTTGGTTTCGCAAGA-AAACTTTCTC-CCCACCAATT-TTG-TA-AAGTCTAAG
* * * * * * * * * * * *
102616 TTTGT-CTCTTAAAAAAGACAAACATGAATACTAATACTAATCCCTATTCATTTT-AGGATTAGG
61 TTCGTGC-CTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCTATTCGTTTTGA-GATTAGG
* * * * * * * * *
102679 CACGACAAACACAATGTTCTCGTAAGGACACAC
124 CACGATAAACACATTATCCTCTTTAGGATAAAT
102712 GATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTC
1 GATATTGAAGCTTTGGTTTCGCAAGAAA-ACTTTCTCCCCACCAAT-TTTGTAAAGTCTAAGTTC
*
102777 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT-TCATTCGTTTTGAGATTAGGCACT
64 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCT-ATTCGTTTTGAGATTAGGCACG
*
102841 ATAAACACATTATCCTCTTTAGGGTAAAT
128 ATAAACACATTATCCTCTTTAGGATAAAT
* * * ** * * * *** * * *
102870 GTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGC-CCTATTTTCCTTAAAATC-AATG
1 GATATTGAAGCTTTGGTTTCGCA-AGAAAAC-TTTCTCCCCACCAATTTT--GTAAAGTCTAA-G
* ** * * ** * *
102933 TTTGACCCTTAAATA-AGACAAGCATTGATTCTCGTAAC-A-G-TCTCTAATC-TTTTCAAGATT
61 TTCGTGCCTCAAA-AGAGACAAACAAGGA-T-TCG-AACAATGATCTCTATTCGTTTT-GAGATT
* * * * *
102993 GGGAACCGA-AAATACA--ATCCCTTCATTAGGATACAT
121 AGGCA-CGATAAACACATTAT-CC-TCTTTAGGATAAAT
* * * * * * ** * *
103029 GACATTGATGCTTTGGTGTCACAAGAGAAGCTTT-TCTTCTTCC-GTTATTGATAGAA-TCAAAG
1 GATATTGAAGCTTTGGTTTCGCAAGA-AAACTTTCTC-CCCACCAATT-TTG-TA-AAGTCTAAG
* * * * * ** * * * * *
103091 TTTGT-CTCTTAAATA-AGACAAACATGAATACTCATACTAATCCCTATTCATTTT-AGGATTAG
61 TTCGTGC-CTCAAA-AGAGACAAACAAGGATTCGAACAATGATCTCTATTCGTTTTGA-GATTAG
* * * * * * * * * *
103153 GCACCACAAACACAGTCTTCTCGTAAGGACACAC
123 GCACGATAAACACATTATCCTCTTTAGGATAAAT
* * *
103187 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTC
1 GATATTGAAGCTTTGGTTTCGCAAGAAA-ACTTTCTCCCCACCAAT-TTTGTAAAGTCTAAGTTC
*
103252 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT-TCATTCGTTTTGAGATTAGGCACT
64 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCT-ATTCGTTTTGAGATTAGGCACG
* *
103316 ATAAACATATTATCCTCTTTAGGGTAAAT
128 ATAAACACATTATCCTCTTTAGGATAAAT
*
103345 GTTATTGA
1 GATATTGA
103353 TGGTTTTCTT
Statistics
Matches: 2326, Mismatches: 735, Indels: 544
0.65 0.20 0.15
Matches are distributed among these distances:
154 1 0.00
155 18 0.01
156 102 0.04
157 111 0.05
158 1109 0.48
159 855 0.37
160 82 0.04
161 27 0.01
162 21 0.01
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.33
Consensus pattern (156 bp):
GATATTGAAGCTTTGGTTTCGCAAGAAAACTTTCTCCCCACCAATTTTGTAAAGTCTAAGTTCGT
GCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCTATTCGTTTTGAGATTAGGCACGATA
AACACATTATCCTCTTTAGGATAAAT
Found at i:105265 original size:475 final size:475
Alignment explanation
Indices: 104356--106435 Score: 3453
Period size: 475 Copynumber: 4.4 Consensus size: 475
104346 AACAATCCCT
104356 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
* *
104421 GGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTATCTCTTAAATAAG
66 GGTGTCACAAGAGAAGCTTTTCTTCTTCAGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
*
104486 ACAAACATGAATACTCATACTAATCCCTATTCA-TTTAGGATTAGGCACCACAAACACAATGTTC
131 ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTC
* *
104550 TCGTAAGGACACACGATATTGAAACGTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTG
196 TCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTG
*
104615 TAAAGTCTAAGTTCGTGACTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
261 TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
104680 GAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCA
326 GAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCA
104745 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
391 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
104810 TGATTCTCGTAACAGTCTCC
456 TGATTCTCGTAACAGTCTCC
* * * * *
104830 AATCTCTTCAAGTTTGAGAACCGAAAATACAATCCCTTTATTAGGATGCATGACATTGATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
* *
104895 GGTGTCACAAGAGAAGCTTTTCTTCTTCAATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAG
66 GGTGTCACAAGAGAAGCTTTTCTTCTTCAGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
104960 ACAAATATGAAAACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATGTTC
131 ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTC
*
105025 TCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTG
196 TCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTG
105090 TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
261 TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
105155 GAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCA
326 GAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCA
* *
105220 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTTTGACCCTTAAATAAGACCAGCAT
391 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
105285 TGATTCTCGTAACAGTCTCC
456 TGATTCTCGTAACAGTCTCC
*
105305 AATCTTTTCAAGCTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
* *
105370 GGTGTCACAAGAAAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
66 GGTGTCACAAGAGAAGCTTTTCTTCTTCAGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
105435 ACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAACATAGTCTTC
131 ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTC
* *
105500 TCGTAAGGACACACGATATTAAAGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACCAAT-TCTT
196 TCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGT-TT
* *
105564 TTGAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTT
260 GTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTT
*
105629 TGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCCTTT-G
325 TGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT-CTTTGG
105693 CATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGC
389 CATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGC
*
105758 ATTGATTCTCGTAACAGTCTCT
454 ATTGATTCTCGTAACAGTCTCC
*
105780 AATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
105845 GGTGTCACAAGAGAAGCTTTTCTTCTTTC-GTTATTGATAGAATCAAAGTTTGTCTCTTAAATAA
66 GGTGTCACAAGAGAAGCTTTTCTTC-TTCAGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAA
* * * *
105909 GACAAACATGAATACTCAAACTAATCCCTACTCATTTTAGGTTTAGGCACCAC-AA-ACAGTCTT
130 GACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTT
* * * *
105972 CTCGTAAGGATACACGATATT-AATGCTTTGGTTTTGCAAGAAACGCTTTCTGCCCACCAATTTT
195 CTCGTAAGGACACACGATATTGAA-GCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTT
*
106036 TGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCATTCGTT
259 TGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTT
*
106101 TTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGATTTTCTTTGG
324 TTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGG
106166 CATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGC
389 CATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGC
106231 ATTGATTCTCGTAACAGTCTCC
454 ATTGATTCTCGTAACAGTCTCC
* * * * * * *
106253 AAACTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
* * * * * * *
106318 GGTATCGA-AAGAGAAGCTTTTTCTT-TCCACTTTTATTGATAGAATCAAAATTAGTCACATAAA
66 GGTGTC-ACAAGAGAAGC-TTTTCTTCTTCA--GTTATTGATAGAATCAAAGTTTGTCTCTTAAA
* * * *
106381 TAAGGCAAATATGAATACTCGTACTAA-GCCTCATTC-TTTTCAGGATTAGGCACCA
127 TAAGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
106436 TAAGCATAAT
Statistics
Matches: 1516, Mismatches: 76, Indels: 27
0.94 0.05 0.02
Matches are distributed among these distances:
472 8 0.01
473 341 0.22
474 171 0.11
475 989 0.65
476 7 0.00
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.33
Consensus pattern (475 bp):
AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
GGTGTCACAAGAGAAGCTTTTCTTCTTCAGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTC
TCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTG
TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
GAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCA
TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
TGATTCTCGTAACAGTCTCC
Found at i:107394 original size:689 final size:689
Alignment explanation
Indices: 106911--111943 Score: 9411
Period size: 689 Copynumber: 7.3 Consensus size: 689
106901 ACCCTTAAAT
106911 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
1 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
*
106976 CCTTGT-TTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTTTTTCCACTGT
66 CCTT-TATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGT
107040 TATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATT
130 TATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATT
107105 CTTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGAT
195 CTTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGAT
107170 TGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGA
260 TGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGA
107235 AGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAC
325 AGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAC
107300 TCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACAC
390 TCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACAC
*
107365 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCTGCCAATGTTTGTAAAGTCTAAGTTC
455 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTC
107430 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTA
520 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTA
107495 TAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTAT
585 TAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTAT
107560 TTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
650 TTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
*
107600 AAGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
1 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
107665 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
66 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
107730 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
131 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
107795 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
196 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
107860 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
261 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
107925 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
326 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
107990 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACG
391 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACG
108055 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
456 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
108120 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
521 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
108185 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
586 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
108250 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
651 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
*
108289 AAGATAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
1 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
* **
108354 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTTTTTATACTGTT
66 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
108419 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
131 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
108484 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
196 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
108549 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
261 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
108614 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
326 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
*
108679 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCGTAAGGACACACG
391 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACG
108744 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
456 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
108809 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
521 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
*
108874 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGATTTTCTTTGGCATGGAAAACTTTTATT
586 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
108939 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
651 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
*
108978 AAGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
1 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
* *
109043 CCTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTTTT
66 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
109108 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
131 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
109173 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
196 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
*
109238 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTGTGTCACAAGAGAA
261 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
*
109303 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAGACT
326 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* *
109368 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATGTTCTCGTAAGGACACACG
391 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACG
* *
109433 ATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCG
456 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
109498 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
521 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
109563 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
586 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
109628 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
651 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
*
109667 AAGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
1 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
* *
109732 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTTTTTCCACTATT
66 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
109797 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAAT-TGAATACTCGTACTAAGCCTCATTC
131 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
109861 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
196 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
109926 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
261 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
109991 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
326 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
110056 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACG
391 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACG
110121 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
456 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
110186 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
521 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
110251 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
586 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
110316 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
651 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
* *
110355 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACGTTTCAAGATTGGGAGCCAAAAGCACATTC
1 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
110420 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
66 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
110485 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
131 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
110550 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
196 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
*
110615 GGGAACCGAAAATACAATCCCCTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
261 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
110680 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
326 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
*
110745 CATACTAATCCCTATTCATTTTAGGATTAGCCACCACAAACACAGTCTTCTCGTAAGGACACACG
391 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACG
110810 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
456 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
*
110875 TGCCTCAAAAGAGACAAACAAGGATTCGAGCAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
521 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
110940 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
586 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
111005 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
651 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
111044 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
1 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
*
111109 CCTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
66 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
* *
111174 ATTGATAGAATCAAAATTAATCACGTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
131 ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
*
111239 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCCCTAATCTTTTCAAGATT
196 TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
111304 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
261 GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
*
111369 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACT
326 GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* *
111434 CATACTAATCCCTATTCA-TTTAGGATTAGGCACCACAAACACAATGTTCTCGTAAGGACACACG
391 CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACG
** * *
111498 ATATTGAAACGTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCG
456 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
*
111563 TGACTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
521 TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
111628 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
586 AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
111693 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
651 TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
* * * * * * * *
111732 AAGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGTTTGAGAACCGAAAATACAATC
1 AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
* * * * *
111797 CCTTTATTAGGATGCATGAGATTGATGCTTTGGTGTC-ACAAGAGAAGC-TTTTCTTCTTCCA--
66 CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGA-AAGAGAAGCTTTTTC-T-TTCCACT
* * * * * * * *
111858 -TTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAATATGAAAACTCATACTAATCC-CT
128 GTTATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTC-
111921 ATTCATTTT-AGGATTAGGCACCA
192 ATTC-TTTTCAGGATTAGGCACCA
111944 CAAACACAAT
Statistics
Matches: 4258, Mismatches: 79, Indels: 17
0.98 0.02 0.00
Matches are distributed among these distances:
685 1 0.00
686 69 0.02
687 10 0.00
688 1049 0.25
689 3129 0.73
ACGTcount: A:0.33, C:0.19, G:0.15, T:0.33
Consensus pattern (689 bp):
AAGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTC
CCTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTT
ATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTC
TTTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGGAACAATCTCTAATCTTTTCAAGATT
GGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
GCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
CATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCGTAAGGACACACG
ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTGTAAAGTCTAAGTTCG
TGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTAT
AAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGGAAAACTTTTATT
TGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
Found at i:110389 original size:688 final size:689
Alignment explanation
Indices: 102968--105010 Score: 3650
Period size: 689 Copynumber: 3.0 Consensus size: 689
102958 TGATTCTCGT
*
102968 AACAGTCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
103033 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
103098 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
103163 CACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCG
196 CACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCG
103228 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
*
103293 CATTCGTTTTGAGATTAGGCACTATAAACATATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
103358 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
*
103423 AGACAAGCATTGATTCTCATAACAGTCTCCAAACGTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
*
103488 CTTTATTAGGATACATGACAATAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
103553 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
586 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
103618 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
651 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
*
103657 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCCTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
103722 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
103787 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
103852 CACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCG
196 CACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCG
*
103917 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAGCAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
103982 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
104047 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
104112 AGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
104177 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
* *
104242 TTGATAGAATCAAAATTAATCACGTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
586 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
104307 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
651 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
*
104346 AACAATCCCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
104411 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTATCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
104476 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCA-TTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* * ** * *
104540 CACAATGTTCTCGTAAGGACACACGATATTGAAACGTTGGTTTTGCAAGAAACACTTTCTCCCCA
196 CACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCG
*
104605 CCAATGTTTGTAAAGTCTAAGTTCGTGACTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
104670 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
104735 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
* * * * * * * * *
104800 AGACAAGCATTGATTCTCGTAACAGTCTCCAATCTCTTCAAGTTTGAGAACCGAAAATACAATCC
456 AGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
* * * * *
104865 CTTTATTAGGATGCATGACATTGATGCTTTGGTGTC-ACAAGAGAAGC-TTTTCTTCTTCA--AT
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGA-AAGAGAAGCTTTTTCTT-TCCACTGT
* * * * * * * *
104926 TATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAATATGAAAACTCATACTAATCC-CTAT
584 TATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTC-AT
104990 TCATTTT-AGGATTAGGCACCA
648 TC-TTTTCAGGATTAGGCACCA
105011 CAAACACAAT
Statistics
Matches: 1307, Mismatches: 43, Indels: 11
0.96 0.03 0.01
Matches are distributed among these distances:
685 1 0.00
686 69 0.05
687 12 0.01
688 374 0.29
689 851 0.65
ACGTcount: A:0.33, C:0.19, G:0.15, T:0.33
Consensus pattern (689 bp):
AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
CACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCG
CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
AGACAAGCATTGATTCTCATAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
Found at i:112178 original size:475 final size:475
Alignment explanation
Indices: 111289--113370 Score: 3519
Period size: 475 Copynumber: 4.4 Consensus size: 475
111279 AACAATCCCT
111289 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
*
111354 GGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTATCTCTTAAATAAG
66 GGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
*
111419 ACAAACATGAATACTCATACTAATCCCTATTCA-TTTAGGATTAGGCACCACAAACACAATGTTC
131 ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTC
* *
111483 TCGTAAGGACACACGATATTGAAACGTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTG
196 TCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTG
*
111548 TAAAGTCTAAGTTCGTGACTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
261 TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
* *
111613 GAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCA
326 GAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCCTTGGCA
111678 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
391 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
111743 TGATTCTCGTAACAGTCTCC
456 TGATTCTCGTAACAGTCTCC
* * * * *
111763 AATCTTTTCAAGTTTGAGAACCGAAAATACAATCCCTTTATTAGGATGCATGAGATTGATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
* *
111828 GGTGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAG
66 GGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
111893 ACAAATATGAAAACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATGTTC
131 ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTC
* *
111958 TCGTAAGGACACACGATATTGAAGCTTTGGTATCGCAAGAAACACTTTCTCCCCACCAATGTTTG
196 TCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTG
112023 TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
261 TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
* *
112088 GAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCA
326 GAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCCTTGGCA
* *
112153 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTTTGACCCTTAAATAAGACCAGCAT
391 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
112218 TGATTCTCGTAACAGTCTCC
456 TGATTCTCGTAACAGTCTCC
*
112238 AATCTTTTCAAGCTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
*
112303 GGTGTCACAAGAAAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
66 GGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
112368 ACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAACATAGTCTTC
131 ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTC
* * * * *
112433 TCGTATGGACACACGATATTAAAGCTTCGGTTTTGCAAGAAACGCTTTCTCCCTACCAAT-TCTT
196 TCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGT-TT
* *
112497 TTGAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTT
260 GTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTT
*
112562 TGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGTTGGTTTTCCTTGGC
325 TGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCCTTGGC
112627 ATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCA
390 ATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCA
*
112692 TTGATTCTCGTAACAGTCTCT
455 TTGATTCTCGTAACAGTCTCC
* *
112713 AATCTTTTCAAGTTTGGGAACTGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
112778 GGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
66 GGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
*
112843 ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTC
131 ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTC
* *
112908 TCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCGCCAATGTTTG
196 TCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTG
112973 TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
261 TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
113038 GAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCCTTGGCA
326 GAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCCTTGGCA
113103 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
391 TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
113168 TGATTCTCGTAACAGTCTCC
456 TGATTCTCGTAACAGTCTCC
* * * * * * *
113188 AAACTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTT
1 AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
* * * * * * *
113253 GGTATCGA-AAGAGAAACTTTTTCTT-TCCACTTTTATTGATAGAATCAAAATTAGTCACTTAAA
66 GGTGTC-ACAAGAGAAGC-TTTTCTTCTTC-C-GTTATTGATAGAATCAAAGTTTGTCTCTTAAA
* * * *
113316 TAAGGCAAATATGAATACTCGTACTAA-GCCTCATTC-TTTTCAGGATTAGGCACCA
127 TAAGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
113371 TAAGCATAAT
Statistics
Matches: 1517, Mismatches: 82, Indels: 15
0.94 0.05 0.01
Matches are distributed among these distances:
474 154 0.10
475 1276 0.84
476 17 0.01
477 70 0.05
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.33
Consensus pattern (475 bp):
AATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTT
GGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAG
ACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTC
TCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTG
TAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTT
GAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCCTTGGCA
TGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCAT
TGATTCTCGTAACAGTCTCC
Found at i:113579 original size:212 final size:214
Alignment explanation
Indices: 113191--113582 Score: 544
Period size: 212 Copynumber: 1.8 Consensus size: 214
113181 AGTCTCCAAA
* * *
113191 CTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTTGGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
* *
113256 ATCGAAAGAGAAACTTTTTCTTTCCACTTTTATTGATAGAATCAAAATTAGTCACTTAAATAAGG
66 ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
* * *
113321 CAAATATGAATACTCGTACTAAGCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
131 CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
113386 TTTGGGAACAATCTCTAAT
196 TTTGGGAACAATCTCTAAT
* * * *
113405 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
* * * * * *
113470 GTC-ACAAGAGAAGC-TTTTCTTCTTC-C-GTTATTGATAGAATCAAAGTTTGTCTCTTAAATAA
66 ATCGA-AAGAGAAACTTTTTCTT-TCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAA
113531 GACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
129 GACAAACATGAATACTCATACTAA-CCCTCATTC-TTTTCAGGATTAGGCACCA
113583 CAAACACAGT
Statistics
Matches: 156, Mismatches: 18, Indels: 10
0.85 0.10 0.05
Matches are distributed among these distances:
212 70 0.45
213 16 0.10
214 70 0.45
ACGTcount: A:0.34, C:0.18, G:0.15, T:0.33
Consensus pattern (214 bp):
CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
TTTGGGAACAATCTCTAAT
Found at i:113775 original size:158 final size:155
Alignment explanation
Indices: 113613--114252 Score: 331
Period size: 157 Copynumber: 4.1 Consensus size: 155
113603 GGACACACGG
* *
113613 TATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCTTCGCCAATGTTTGTAAAGTCTAAGTTCGT
1 TATTGATGCTTTGGTTTCGCAAGAAA-ACTTT-TCTTCGCCAAT-TTTGTAAAGTCAAAGTTCGT
* *
113678 GCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATA
63 GCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTCCATTCGTTTTGAGATTAGGCACTATA
* *
113743 AACACATTATCCTCTTTAGGGTAAATGT
128 AACACATTATCCTCTTTAGGATAAATGA
* ** * * * * * * * *
113771 TATTGATGGTTTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTG
1 TATTGATGCTTTGGTTTCGCA-AGAAAACTTTTCTTCG-CCAATTTT--GTAAAGTCAAAGTTCG
** * * ** * * * *
113836 ACCCTTAAATA-AGACAAGCATTGATTCTCGTAAC-A-G-TCTCCACTC-TTTTCA-AGTTTGAG
62 TGCCTCAAA-AGAGACAAACAAGGA-T-ACG-AACAATGATCTCCATTCGTTTTGAGA-TTAG-G
* * * * **
113895 AACCGA-AAATACA--ATCCCTTCATTAGGATGCATGA
121 CA-CTATAAACACATTAT-CC-TCTTTAGGATAAATGA
* * * *
113930 CATTGATGCTTTGGTGTCACAAGAGAAACTTTTCTTCTTCC-ATTATTGATAGAA-TCAAAGTTT
1 TATTGATGCTTTGGTTTCGCAAGA-AAACTTTTCTTC-GCCAATT-TTG-TA-AAGTCAAAG-TT
* * * * * ** * * * *
113993 C-T-CTCTTAAAAAAGACAAGCATGAATACTCATACTAATC-CCTATTCATTTT-AGGATTAGGC
60 CGTGC-CTCAAAAGAGACAAACAAGGATACGAACAATGATCTCC-ATTCGTTTTGA-GATTAGGC
* * * * * * * * *
114054 ACCACAAACACAATGTTCTCGTAAGGACACA-GA
122 ACTATAAACACATTATCCTCTTTAGGATAAATGA
* ** * *
114087 TATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTCGT
1 TATTGATGCTTTGGTTTCGCAAGAAA-ACTTT-TCTTCGCCAAT-TTTGTAAAGTCAAAGTTCGT
*
114152 GCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTATA
63 GCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTCCATTCGTTTTGAGATTAGGCACTATA
* *
114217 AACACATTATCCTCTTTAGGGTAAATGT
128 AACACATTATCCTCTTTAGGATAAATGA
114245 TATTGATG
1 TATTGATG
114253 GTTTTCTTTG
Statistics
Matches: 346, Mismatches: 95, Indels: 82
0.66 0.18 0.16
Matches are distributed among these distances:
155 1 0.00
156 8 0.02
157 116 0.34
158 108 0.31
159 99 0.29
160 7 0.02
161 4 0.01
162 3 0.01
ACGTcount: A:0.32, C:0.19, G:0.16, T:0.33
Consensus pattern (155 bp):
TATTGATGCTTTGGTTTCGCAAGAAAACTTTTCTTCGCCAATTTTGTAAAGTCAAAGTTCGTGCC
TCAAAAGAGACAAACAAGGATACGAACAATGATCTCCATTCGTTTTGAGATTAGGCACTATAAAC
ACATTATCCTCTTTAGGATAAATGA
Found at i:114292 original size:474 final size:475
Alignment explanation
Indices: 113392--114533 Score: 1855
Period size: 474 Copynumber: 2.4 Consensus size: 475
113382 AAAGTTTGGG
* *
113392 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
* * *
113457 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
113522 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* * * * ** *
113587 CACAGTCTTCTCGTAAGGACACACGGTATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCTTCG
196 CACAATCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCA
*
113652 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTT
113717 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
113782 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
113847 AGACAAGCATTGATTCTCGT
456 AGACAAGCATTGATTCTCGT
* * * *
113867 AACAGTCTCCACTCTTTTCAAGTTTGAGAACCGAAAATACAATCCCTTCATTAGGATGCATGACA
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
113932 TTGATGCTTTGGTGTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTCTCT
66 TTGATGCTTTGGTGTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
* *
113997 CTTAAAAAAGACAAGCATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
*
114062 CACAATGTTCTCGTAAGGACACA-GATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCA
196 CACAATCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCA
114126 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTT
114191 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
114256 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
114321 AGACAAGCATTGATTCTCGT
456 AGACAAGCATTGATTCTCGT
* * * * * *
114341 AACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
* * *
114406 TTAATGCTTTGGTATCGA-AAGAGAAAC-TTT-TTCTTTCCACTTTTATTGATAGAATCAAAATT
66 TTGATGCTTTGGTGTC-ACAAGAGAAACTTTTCTTC-TTCCA---TTATTGATAGAATCAAAGTT
* * * * * *
114468 AGTCACTTAAATAAGGCAAATATGAATACTCGTACTAA-GCCTCATTC-TTTTCAGGATTAGGCA
126 TGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCA
114531 CCA
189 CCA
114534 TAAGCATAAT
Statistics
Matches: 617, Mismatches: 43, Indels: 13
0.92 0.06 0.02
Matches are distributed among these distances:
472 3 0.00
473 8 0.01
474 327 0.53
475 212 0.34
476 67 0.11
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.33
Consensus pattern (475 bp):
AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
TTGATGCTTTGGTGTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
CACAATCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCA
CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTT
CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
AGACAAGCATTGATTCTCGT
Found at i:114742 original size:212 final size:214
Alignment explanation
Indices: 114354--114745 Score: 544
Period size: 212 Copynumber: 1.8 Consensus size: 214
114344 AGTCTCCAAA
* * *
114354 CTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTTGGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
* *
114419 ATCGAAAGAGAAACTTTTTCTTTCCACTTTTATTGATAGAATCAAAATTAGTCACTTAAATAAGG
66 ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
* * *
114484 CAAATATGAATACTCGTACTAAGCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
131 CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
114549 TTTGGGAACAATCCCTAAT
196 TTTGGGAACAATCCCTAAT
* * * *
114568 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
* * * * * *
114633 GTC-ACAAGAGAAGC-TTTTCTTCTTC-C-GTTATTGATAGAATCAAAGTTTGTCTCTTAAATAA
66 ATCGA-AAGAGAAACTTTTTCTT-TCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAA
114694 GACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
129 GACAAACATGAATACTCATACTAA-CCCTCATTC-TTTTCAGGATTAGGCACCA
114746 CAAACACAGT
Statistics
Matches: 156, Mismatches: 18, Indels: 10
0.85 0.10 0.05
Matches are distributed among these distances:
212 70 0.45
213 16 0.10
214 70 0.45
ACGTcount: A:0.34, C:0.19, G:0.15, T:0.33
Consensus pattern (214 bp):
CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
TTTGGGAACAATCCCTAAT
Found at i:115459 original size:474 final size:475
Alignment explanation
Indices: 114568--115692 Score: 1787
Period size: 474 Copynumber: 2.4 Consensus size: 475
114558 AATCCCTAAT
* * * *
114568 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTGT
1 CTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGT
* *
114633 GTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
66 GTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
*
114698 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCG
131 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCG
* * * ** *
114763 TAAGGACACACGGTATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCTTCGCCAATGTTTGTAA
196 TAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTGTAA
*
114828 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
261 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTTCATTCGTTTTGAG
114893 ATTAGGCACTATAAACACATTATCCTCTTGAGGGTAAATGTTATTAATGGTTTTCTTCGGCATGG
326 ATTAGGCACTATAAACACATTATCCTCTTGAGGGTAAATGTTATTAATGGTTTTCTTCGGCATGG
* * *
114958 AAATCTTTTCTTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACATGCATTGA
391 AAAACTTTTATTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
*
115023 TTCTCGTAACAGTCTTCAAA
456 TTCTCGTAACAGTCTCCAAA
*
115043 CTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTGGGATACATGACATTGATGCTTTGGT
1 CTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGT
* *
115108 GTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTCTCTCTTAAAAAAGACA
66 GTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* *
115173 AGCATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATGTTCTCG
131 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCG
115238 TAAGGACACA-GATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTGTAA
196 TAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTGTAA
115302 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTTCATTCGTTTTGAG
261 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTTCATTCGTTTTGAG
* * *
115367 ATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGG
326 ATTAGGCACTATAAACACATTATCCTCTTGAGGGTAAATGTTATTAATGGTTTTCTTCGGCATGG
*
115432 AAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
391 AAAACTTTTATTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
115497 TTCTCGTAACAGTCTCCAAA
456 TTCTCGTAACAGTCTCCAAA
* *
115517 CTTTTCAAGATTGGGAGCCAAAAACACATTCCCTAT-ATTAGGATACATGACATTAATGCTTTGG
1 CTTTTCAAGATTGGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGG
* * * * *
115581 TATCGA-AAGAGAAAC-TTT-TTCTTTCCACTTTTATTAATAGAATCAAAATTAGTCACTTAAAT
65 TGTC-ACAAGAGAAACTTTTCTTC-TTCCA---TTATTGATAGAATCAAAGTTTGTCTCTTAAAT
* * * *
115643 AAGGCAAATATGAATACTCGTACTAA-GCCTCATTC-TTTTCAGGATTAGGC
125 AAGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGC
115693 GCCATAAGCA
Statistics
Matches: 600, Mismatches: 42, Indels: 15
0.91 0.06 0.02
Matches are distributed among these distances:
472 3 0.00
473 8 0.01
474 325 0.54
475 202 0.34
476 62 0.10
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.33
Consensus pattern (475 bp):
CTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGT
GTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCG
TAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCACCAATGTTTGTAA
AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTTCATTCGTTTTGAG
ATTAGGCACTATAAACACATTATCCTCTTGAGGGTAAATGTTATTAATGGTTTTCTTCGGCATGG
AAAACTTTTATTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
TTCTCGTAACAGTCTCCAAA
Found at i:116576 original size:158 final size:158
Alignment explanation
Indices: 115937--116579 Score: 359
Period size: 158 Copynumber: 4.1 Consensus size: 158
115927 AAGGACACAC
* *** *
115937 GATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAAAGTCTAAGTTC
1 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCTTGCCAATGTTTGTAAAGTCAAAGTTC
*
116002 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTA
66 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACCA
*
116067 TAAACACATTATCCTCTTTAGGCTAAAT
131 TAAACACATTATCCTCTTTAGGGTAAAT
* * * ** ** * * * * * *
116095 GTTATTAATGGTTTTCTTCGGCATGGAAA-TCTTT-TCTTTGCCCTATATTCCT-TAAAATCAAA
1 GATATTGATGCTTTGGTTTTGCA-AGAAACACTTTCTCCTTG-CCAATGTT--TGTAAAGTCAAA
* ** * ** ** ** *
116157 GTTTGACCCTTAAATA-AGACATGCATTGATTCTCGTAAC-A-G-TCTTCAAAC-TTTTCAAGAT
62 GTTCGTGCCTCAAA-AGAGACAAACAAGGA-T-TCG-AACAATGATCTTCATTCGTTTT-GAGAT
* * * * * *
116217 TGGGAACCAAAAACACATT-CCCTTCATT-GGGATACAT
122 TAGGCACCATAAACACATTATCC-TCTTTAGGG-TAAAT
* * ** * *
116254 GACATTGATGCTTTGGTGTCACAAGAGAAGC-TTTTCTTCTT-CC-AT-TATTGATAGAA-TCAA
1 GATATTGATGCTTTGGTTTTGCAAGA-AA-CACTTTCTCCTTGCCAATGT-TTG-TA-AAGTCAA
* * * * * * ** * * * * *
116314 AGTTTGT-CTCTTAAAAAAGACAAACATGAATACTCATACTAATC-CCTATTCATTTT-AGGATT
61 AGTTCGTGC-CTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTC-ATTCGTTTTGA-GATT
* * * * * * ** * *
116376 AGGCACCACAAACACAGTCTTCTCGTAAGGACACAC
123 AGGCACCATAAACACATTATCCTCTTTAGGGTAAAT
* *
116412 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCTTGCCAAGGTTTGTAAAGTCTAAGTTC
1 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCTTGCCAATGTTTGTAAAGTCAAAGTTC
*
116477 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTA
66 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACCA
116542 TAAACACATTATCCTCTTTAGGGTAAAT
131 TAAACACATTATCCTCTTTAGGGTAAAT
*
116570 GTTATTGATG
1 GATATTGATG
116580 GTTTTCTTTG
Statistics
Matches: 339, Mismatches: 109, Indels: 74
0.65 0.21 0.14
Matches are distributed among these distances:
155 1 0.00
156 3 0.01
157 20 0.06
158 199 0.59
159 98 0.29
160 8 0.02
161 7 0.02
162 3 0.01
ACGTcount: A:0.32, C:0.19, G:0.16, T:0.33
Consensus pattern (158 bp):
GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCTTGCCAATGTTTGTAAAGTCAAAGTTC
GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACCA
TAAACACATTATCCTCTTTAGGGTAAAT
Found at i:116623 original size:475 final size:475
Alignment explanation
Indices: 115731--116860 Score: 1849
Period size: 475 Copynumber: 2.4 Consensus size: 475
115721 AATCTCTAAT
*
115731 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTGT
1 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGT
*
115796 GTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
66 GTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
*
115861 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATGTTCTCG
131 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCG
*
115926 TAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAA
196 TAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAAGGTTTGTAA
115991 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
261 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
116056 ATTAGGCACTATAAACACATTATCCTCTTTAGGCTAAATGTTATTAATGGTTTTCTTCGGCATGG
326 ATTAGGCACTATAAACACATTATCCTCTTTAGGCTAAATGTTATTAATGGTTTTCTTCGGCATGG
* * *
116121 AAATCTTTTCTTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACATGCATTGA
391 AAAACTTTTATTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
*
116186 TTCTCGTAACAGTCTTCAAA
456 TTCTCGTAACAGTCTCCAAA
* * * *
116206 CTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTGGGATACATGACATTGATGCTTTGGT
1 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGT
*
116271 GTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACA
66 GTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
*
116336 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCG
131 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCG
* ***
116401 TAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCTTGCCAAGGTTTGTAA
196 TAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAAGGTTTGTAA
116466 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
261 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
* * *
116531 ATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGG
326 ATTAGGCACTATAAACACATTATCCTCTTTAGGCTAAATGTTATTAATGGTTTTCTTCGGCATGG
*
116596 AAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
391 AAAACTTTTATTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
*
116661 TTCTCGTAACAGTCTCCAAT
456 TTCTCGTAACAGTCTCCAAA
* * *
116681 CTTTTCAAGTTTGAGAACCGAAAATACAATCCCTTCATTAGGATGCATGACATTGATGCTTTGGT
1 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGT
* * *
116746 GTCGA-AAGAGACA-C-TTT-TTCTTTCCACTTTTATTGATAGAATCAAAATTAGTCACTTAAAT
66 GTC-ACAAGAGA-AGCTTTTCTTC-TTCCA---TTATTGATAGAATCAAAGTTTGTCTCTTAAAT
* * * *
116807 AAGGCAAATATGAATACTCGTACTAA-GCCTCATTC-TTTTCAGGATTAGGCACCA
125 AAGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
116861 TAAGCATAAT
Statistics
Matches: 609, Mismatches: 38, Indels: 14
0.92 0.06 0.02
Matches are distributed among these distances:
473 3 0.00
474 8 0.01
475 520 0.85
476 9 0.01
477 69 0.11
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.33
Consensus pattern (475 bp):
CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGT
GTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCG
TAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAAGGTTTGTAA
AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
ATTAGGCACTATAAACACATTATCCTCTTTAGGCTAAATGTTATTAATGGTTTTCTTCGGCATGG
AAAACTTTTATTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
TTCTCGTAACAGTCTCCAAA
Found at i:117998 original size:475 final size:475
Alignment explanation
Indices: 116882--118498 Score: 2715
Period size: 475 Copynumber: 3.4 Consensus size: 475
116872 AAAGTTTGGG
* *
116882 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
116947 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
117012 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* *
117077 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
196 CACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
117142 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
* *
117207 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGCTAAATGTTATTGATGG-T
326 CATTCGTTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
* *
117271 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTTTGACCCTTAAATA
391 TTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
*
117336 AGACCAGCATTGATTCTCGT
456 AGACAAGCATTGATTCTCGT
*
117356 AACAGTCTCCAATCTTTTCAAGCTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
117421 TTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
*
117486 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* * * * * *
117551 CATAGTCTTCTCGTATGGACACACGATATTAAAGCTTCGGTTTTGCAAGAAACGCTTTCTCCCTA
196 CACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
* *
117616 CCAAT-TCTTTTGAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT
261 CCAATGT-TTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT
*
117680 TCATTCGTTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGTTGGT
325 TCATTCGTTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGT
*
117745 TTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTGAAATCAAAGTTTGACCCTTAAAT
390 TTTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
117810 AAGACAAGCATTGATTCTCGT
455 AAGACAAGCATTGATTCTCGT
* *
117831 AACAGTCTCTAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
117896 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
117961 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* * *
118026 CACAGTCTTCTCGTAAGGGCACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCG
196 CACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
118091 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
118156 CATTCGTTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
118221 TTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
118286 AGACAAGCATTGATTCTCGT
456 AGACAAGCATTGATTCTCGT
* * * * * *
118306 AACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
* * * * * * *
118371 TTAATGCTTTGGTATCGA-AAGAGAAACTTTTTCTT-TCCACTTTTATTGATAGAATCAAAATTA
66 TTGATGCTTTGGTGTC-ACAAGAGAAGC-TTTTCTTCTTC-C-GTTATTGATAGAATCAAAGTTT
* * * * *
118434 GTCACTTAAATAAGGCAAATATGAATACTCGTACTAA-GCCTCATTC-TTTTCAGGATTAGGCAC
127 GTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCAC
118497 CA
190 CA
118499 TAAGCATAAT
Statistics
Matches: 1074, Mismatches: 60, Indels: 15
0.93 0.05 0.01
Matches are distributed among these distances:
473 1 0.00
474 367 0.34
475 619 0.58
476 17 0.02
477 70 0.07
ACGTcount: A:0.32, C:0.20, G:0.15, T:0.33
Consensus pattern (475 bp):
AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
CACAGTCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
CATTCGTTTTGAAATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
TTCCTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
AGACAAGCATTGATTCTCGT
Found at i:118707 original size:212 final size:214
Alignment explanation
Indices: 118319--118710 Score: 544
Period size: 212 Copynumber: 1.8 Consensus size: 214
118309 AGTCTCCAAA
* * *
118319 CTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTTGGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
* *
118384 ATCGAAAGAGAAACTTTTTCTTTCCACTTTTATTGATAGAATCAAAATTAGTCACTTAAATAAGG
66 ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
* * *
118449 CAAATATGAATACTCGTACTAAGCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
131 CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
118514 TTTGGGAACAATCTCTAAT
196 TTTGGGAACAATCTCTAAT
* * * *
118533 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
* * * * * *
118598 GTC-ACAAGAGAAGC-TTTTCTTCTTC-C-GTTATTGATAGAATCAAAGTTTGTCTCTTAAATAA
66 ATCGA-AAGAGAAACTTTTTCTT-TCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAA
118659 GACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
129 GACAAACATGAATACTCATACTAA-CCCTCATTC-TTTTCAGGATTAGGCACCA
118711 CAAACACAGT
Statistics
Matches: 156, Mismatches: 18, Indels: 10
0.85 0.10 0.05
Matches are distributed among these distances:
212 70 0.45
213 16 0.10
214 70 0.45
ACGTcount: A:0.34, C:0.18, G:0.15, T:0.33
Consensus pattern (214 bp):
CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
TTTGGGAACAATCTCTAAT
Found at i:119420 original size:474 final size:475
Alignment explanation
Indices: 118520--119657 Score: 1822
Period size: 474 Copynumber: 2.4 Consensus size: 475
118510 AAAGTTTGGG
* *
118520 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
* * *
118585 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
118650 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* * * * ** *
118715 CACAGTCTTCTCGTAAGGACACACGGTATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCTTCG
196 CACAATCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCA
*
118780 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTT
118845 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAAGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAAGGTAAATGTTATTGATGGTT
118910 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
118975 AGACAAGCATTGATTCTCGT
456 AGACAAGCATTGATTCTCGT
* * * *
118995 AACAGTCTCCACTCTTTTCAAGTTTGAGAACCGAAAATACAATCCCTTCATTAGGATGCATGACA
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
119060 TTGATGCTTTGGTGTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTCTCT
66 TTGATGCTTTGGTGTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
* *
119125 CTTAAAAAAGACAAGCATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
*
119190 CACAATGTTCTCGTAAGGACACA-GATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCA
196 CACAATCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCA
119254 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTT
*
119319 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAAGGTAAATGTTATTGATGGTT
119384 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
119449 AGACAAGCATTGATTCTCGT
456 AGACAAGCATTGATTCTCGT
* * * * *
119469 AACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCCCTAT-ATTAGGATACATGAC
1 AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCT-TCATTAGGATACATGAC
* * * *
119533 ATTAATGCTTTGGTATCGA-AAGAGAAAC-TTT-TTCTTTCCACTTTTATTAATAGAATCAAAAT
65 ATTGATGCTTTGGTGTC-ACAAGAGAAACTTTTCTTC-TTCCA---TTATTGATAGAATCAAAGT
* * * * * *
119595 TAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAA-GCCTCATTC-TTTTCAGGATTAGGC
125 TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGC
119658 GCCATAAGCA
Statistics
Matches: 611, Mismatches: 44, Indels: 15
0.91 0.07 0.02
Matches are distributed among these distances:
472 3 0.00
473 8 0.01
474 325 0.53
475 213 0.35
476 62 0.10
ACGTcount: A:0.33, C:0.19, G:0.15, T:0.33
Consensus pattern (475 bp):
AACAGTCTCCAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
TTGATGCTTTGGTGTCACAAGAGAAACTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
CACAATCTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTCGCAAGAAACACTTTCTCCCCA
CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATACGAACAATGATCTT
CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAAGGTAAATGTTATTGATGGTT
TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
AGACAAGCATTGATTCTCGT
Found at i:120588 original size:475 final size:475
Alignment explanation
Indices: 119696--120825 Score: 1849
Period size: 475 Copynumber: 2.4 Consensus size: 475
119686 AATCTCTAAT
*
119696 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTGT
1 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGT
*
119761 GTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
66 GTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* *
119826 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATGTTCTCG
131 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCA
*
119891 TAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAATGTTTGTAA
196 TAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAAGGTTTGTAA
119956 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
261 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
120021 ATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTAATGGTTTTCTTCGGCATGG
326 ATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTAATGGTTTTCTTCGGCATGG
* * *
120086 AAATCTTTTCTTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACATGCATTGA
391 AAAACTTTTATTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
*
120151 TTCTCGTAACAGTCTTCAAA
456 TTCTCGTAACAGTCTCCAAA
* * * *
120171 CTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTGGGATACATGACATTGATGCTTTGGT
1 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGT
* *
120236 GTCACAAGGGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACA
66 GTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
*
120301 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAGTCTTCTCA
131 AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCA
* **
120366 TAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCTGCCAAGGTTTGTAA
196 TAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAAGGTTTGTAA
120431 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
261 AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
* *
120496 ATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCATGG
326 ATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTAATGGTTTTCTTCGGCATGG
*
120561 AAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
391 AAAACTTTTATTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
*
120626 TTCTCGTAACAGTCTCCAAT
456 TTCTCGTAACAGTCTCCAAA
* * *
120646 CTTTTCAAGTTTGAGAACCGAAAATACAATCCCTTCATTAGGATGCATGACATTGATGCTTTGGT
1 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGT
* * *
120711 GTCGA-AAGAGACA-C-TTT-TTCTTCCCACTTTTATTGATAGAATCAAAATTAGTCACTTAAAT
66 GTC-ACAAGAGA-AGCTTTTCTTCTT-CCA---TTATTGATAGAATCAAAGTTTGTCTCTTAAAT
* * * *
120772 AAGGCAAATATGAATACTCGTACTAA-GCCTCATTC-TTTTCAGGATTAGGCACCA
125 AAGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
120826 TAAGCATAAT
Statistics
Matches: 608, Mismatches: 39, Indels: 14
0.92 0.06 0.02
Matches are distributed among these distances:
473 5 0.01
474 6 0.01
475 519 0.85
476 9 0.01
477 69 0.11
ACGTcount: A:0.32, C:0.20, G:0.15, T:0.33
Consensus pattern (475 bp):
CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTGGT
GTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
AACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAACACAATCTTCTCA
TAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCACCAAGGTTTGTAA
AGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAG
ATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTAATGGTTTTCTTCGGCATGG
AAAACTTTTATTTGCCCTATATTCCTTAAAATCAAAGTTTGACCCTTAAATAAGACAAGCATTGA
TTCTCGTAACAGTCTCCAAA
Found at i:122197 original size:212 final size:214
Alignment explanation
Indices: 121809--122200 Score: 537
Period size: 212 Copynumber: 1.8 Consensus size: 214
121799 AGTCTCCAAA
* * *
121809 CTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTTGAT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGAT
* *
121874 ATCGAAAGAGAAACTTTTTCTTTCCACTTTTATTGATAGAATCAAAATTAGTCACTTAAATAAGG
66 ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
* * *
121939 CAAATATGAATACTCGTACTAAGCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
131 CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
122004 TTTGGGAACAATCTCTAAT
196 TTTGGGAACAATCTCTAAT
* * *
122023 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTG-
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGC-TTTGA
* * * * * *
122087 TGTC-ACAAGAGAAGC-TTTTCTTCTTC-C-GTTATTGATAGAATCAAAGTTTGTCTCTTAAATA
65 TATCGA-AAGAGAAACTTTTTCTT-TCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATA
122148 AGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
128 AGACAAACATGAATACTCATACTAA-CCCTCATTC-TTTTCAGGATTAGGCACCA
122201 CAAACACAAT
Statistics
Matches: 156, Mismatches: 17, Indels: 12
0.84 0.09 0.06
Matches are distributed among these distances:
212 70 0.45
213 16 0.10
214 66 0.42
215 4 0.03
ACGTcount: A:0.34, C:0.18, G:0.14, T:0.33
Consensus pattern (214 bp):
CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGAT
ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
TTTGGGAACAATCTCTAAT
Found at i:122648 original size:689 final size:689
Alignment explanation
Indices: 121321--126119 Score: 8930
Period size: 689 Copynumber: 7.0 Consensus size: 689
121311 TGATTCTCGT
* * * *
121321 AACAGTCTCCAATCTTTTCAAGTTTGAGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
* *
121386 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
*
121451 CTTAAAAAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* * * *
121516 CACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCG
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
*
121581 CCAAGGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
*
121646 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
121711 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
*
121776 AGACAAGCATTGATTCTCGCAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
* * *
121841 CTTTATTAGGATACATGACATTAATGCTTTGATATCGAAAGAGAAACTTTTTCTTTCCACTTTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
121906 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
586 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
121971 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
651 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
122010 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
122075 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
122140 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
122205 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
122270 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
122335 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
*
122400 TTCTTTGGCATGGAAAACTTTTATTTACCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
*
122465 AGACAAGCATTGATTCTCGTAACAGTCTCCAAAATTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
122530 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
122595 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
586 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
*
122660 TTTCAGGATTAGGCACCATAAGCATAATCAATGTTTGGG
651 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
122699 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
122764 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
122829 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
122894 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
122959 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
123024 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
123089 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
*
123154 AGACAAGCATTGATTCTCGTAACAGCCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
*
123219 CTTTATTGGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
123284 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
586 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
123349 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
651 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
*
123388 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCCTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
123453 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
123518 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* * * * *
123583 CACAGTCTTCTTGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCCCG
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
*
123648 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAGCAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
*
123713 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
123778 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
123843 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
* * *
123908 CTTTATTAGGATACATGACATTAATGCTTTGATATCGAAAGAGAAACTTTTTCTTTCCACTTTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
123973 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
586 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
124038 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
651 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
124077 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
124142 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
124207 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
124272 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
124337 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
124402 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
* *
124467 TTCTTTGGCATGGAAAACTTTTATTTACCCTATTTTCCTTAAAATCAAAGTTTAACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
124532 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
124597 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
124662 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
586 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
*
124727 TTTCAGGATTAGGCACCATAAGCATAATCAATGTTTGGG
651 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
124766 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
124831 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
124896 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
124961 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
125026 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
125091 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
125156 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
*
125221 AGACAAGCATTGATTCTCGTAACAGCCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
125286 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
125351 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
586 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
*
125416 TTTCAGGATTAGGCACCATAAGCATAATCAATGTTTGGG
651 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
125455 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
125520 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
*
125585 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACAACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* *
125650 CATAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTTTCCCCA
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
125715 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
*
125780 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGG-T
326 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
125844 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
* * * * * * *
125909 AGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGTTTGAGAACCGAAAATACAATCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
* * * *
125974 CTTCATTAGGATACATGACATTGATGCTTTGGTGTC-ACAGGAGAAGC-TTTTCTTCTTCCA---
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGA-AAGAGAAGCTTTTTC-T-TTCCACTG
* * * * * * * *
126034 TTATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGAATACTCATACTAATCC-CTA
583 TTATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTC-A
126098 TTCATTTT-AGGATTAGGCACCA
647 TTC-TTTTCAGGATTAGGCACCA
126120 CAAACACAGT
Statistics
Matches: 4023, Mismatches: 82, Indels: 13
0.98 0.02 0.00
Matches are distributed among these distances:
685 1 0.00
686 71 0.02
687 10 0.00
688 165 0.04
689 3776 0.94
ACGTcount: A:0.33, C:0.19, G:0.15, T:0.33
Consensus pattern (689 bp):
AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
Found at i:124264 original size:212 final size:214
Alignment explanation
Indices: 123876--124267 Score: 537
Period size: 212 Copynumber: 1.8 Consensus size: 214
123866 AGTCTCCAAA
* * *
123876 CTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTTGAT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGAT
* *
123941 ATCGAAAGAGAAACTTTTTCTTTCCACTTTTATTGATAGAATCAAAATTAGTCACTTAAATAAGG
66 ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
* * *
124006 CAAATATGAATACTCGTACTAAGCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
131 CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
124071 TTTGGGAACAATCTCTAAT
196 TTTGGGAACAATCTCTAAT
* * *
124090 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTG-
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGC-TTTGA
* * * * * *
124154 TGTC-ACAAGAGAAGC-TTTTCTTCTTC-C-GTTATTGATAGAATCAAAGTTTGTCTCTTAAATA
65 TATCGA-AAGAGAAACTTTTTCTT-TCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATA
124215 AGACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
128 AGACAAACATGAATACTCATACTAA-CCCTCATTC-TTTTCAGGATTAGGCACCA
124268 CAAACACAAT
Statistics
Matches: 156, Mismatches: 17, Indels: 12
0.84 0.09 0.06
Matches are distributed among these distances:
212 70 0.45
213 16 0.10
214 66 0.42
215 4 0.03
ACGTcount: A:0.34, C:0.18, G:0.14, T:0.33
Consensus pattern (214 bp):
CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGAT
ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
TTTGGGAACAATCTCTAAT
Found at i:126312 original size:158 final size:155
Alignment explanation
Indices: 125674--126315 Score: 342
Period size: 158 Copynumber: 4.1 Consensus size: 155
125664 AAGGACACAC
* * * *
125674 GATATTGAAGCTTTGGTTTTGCAAGAAACACTTTTTCCCCACCAATGTTTGTAAAGTCTAAGTTC
1 GATATTGATGCTTTGGTTTTGCAAGAAA-AC-TTTTCCTCGCCAAT-TTTGTAAAGTCAAAGTTC
*
125739 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTA
63 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCCATTCGTTTTGAGATTAGGCACTA
*
125804 TAAACACATTATCCTCTTTAGGGTAAAT
128 TAAACACATTATCCTCTTTAGGATAAAT
* * * * * ** * * * *
125832 GTTATTGATGGTTT-CTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTT
1 GATATTGATGCTTTGGTTTTGCA-AGAAAACTTTTCCTCG-CCAATTTT--GTAAAGTCAAAGTT
* ** * * ** * * *
125896 TGACCCTTAAATA-AGACAAGCATTGATTCTCGTAAC-A-G-TCTCCAATC-TTTTCA-AGTTTG
62 CGTGCCTCAAA-AGAGACAAACAAGGA-T-TCG-AACAATGATCTCCATTCGTTTTGAGA-TTAG
* * * * *
125955 AGAACCGA-AAATACA--ATCCCTTCATTAGGATACAT
122 -GCA-CTATAAACACATTAT-CC-TCTTTAGGATAAAT
* * ** * * * *
125990 GACATTGATGCTTTGGTGTCACAGGAGAAGCTTTTCTTCTTCC-ATTATTGATAGAA-TCAAAGT
1 GATATTGATGCTTTGGTTTTGCAAGA-AAACTTTTCCTC-GCCAATT-TTG-TA-AAGTCAAAGT
* * * * * * ** * * * *
126053 TTGT-CTCTTAAAAAAGACAAACATGAATACTCATACTAATC-CCTATTCATTTT-AGGATTAGG
61 TCGTGC-CTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCC-ATTCGTTTTGA-GATTAGG
* * * * * * * * * *
126115 CACCACAAACACAGTCTTCTCGTAAGGACACAC
123 CACTATAAACACATTATCCTCTTTAGGATAAAT
*
126148 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCTCGCCAATGTTTGTAAAGTCTAAGTTC
1 GATATTGATGCTTTGGTTTTGCAAGAAA-ACTTT-TCCTCGCCAAT-TTTGTAAAGTCAAAGTTC
*
126213 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTCATTCGTTTTGAGATTAGGCACTA
63 GTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCCATTCGTTTTGAGATTAGGCACTA
*
126278 TAAACACATTATCCTCTTTAGGGTAAAT
128 TAAACACATTATCCTCTTTAGGATAAAT
*
126306 GTTATTGATG
1 GATATTGATG
126316 GTTTTCTTTG
Statistics
Matches: 346, Mismatches: 99, Indels: 78
0.66 0.19 0.15
Matches are distributed among these distances:
155 1 0.00
156 11 0.03
157 33 0.10
158 247 0.71
159 44 0.13
160 7 0.02
161 3 0.01
ACGTcount: A:0.32, C:0.19, G:0.16, T:0.33
Consensus pattern (155 bp):
GATATTGATGCTTTGGTTTTGCAAGAAAACTTTTCCTCGCCAATTTTGTAAAGTCAAAGTTCGTG
CCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTCCATTCGTTTTGAGATTAGGCACTATAA
ACACATTATCCTCTTTAGGATAAAT
Found at i:126805 original size:212 final size:214
Alignment explanation
Indices: 126417--126808 Score: 544
Period size: 212 Copynumber: 1.8 Consensus size: 214
126407 AGTCTCCAAA
* * *
126417 CTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTTGGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
* *
126482 ATCGAAAGAGAAACTTTTTCTTTCCACTTTTATTGATAGAATCAAAATTAGTCACTTAAATAAGG
66 ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
* * *
126547 CAAATATGAATACTCGTACTAAGCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
131 CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
126612 TTTGGGAACAATCTCTAAT
196 TTTGGGAACAATCTCTAAT
* * * *
126631 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACATTGATGCTTTTGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
* * * * * *
126696 GTC-ACAAGAGAAGC-TTTTCTTCTTC-C-GTTATTGATAGAATCAAAGTTTGTCTCTTAAATAA
66 ATCGA-AAGAGAAACTTTTTCTT-TCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAA
126757 GACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
129 GACAAACATGAATACTCATACTAA-CCCTCATTC-TTTTCAGGATTAGGCACCA
126809 CAAACACAAT
Statistics
Matches: 156, Mismatches: 18, Indels: 10
0.85 0.10 0.05
Matches are distributed among these distances:
212 70 0.45
213 16 0.10
214 70 0.45
ACGTcount: A:0.34, C:0.18, G:0.15, T:0.33
Consensus pattern (214 bp):
CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAGGATACATGACATTAATGCTTTGGT
ATCGAAAGAGAAACTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAAAG
TTTGGGAACAATCTCTAAT
Found at i:127256 original size:689 final size:688
Alignment explanation
Indices: 125929--127970 Score: 3632
Period size: 689 Copynumber: 3.0 Consensus size: 688
125919 TGATTCTCGT
* * * *
125929 AACAGTCTCCAATCTTTTCAAGTTTGAGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
* *
125994 TTGATGCTTTGGTGTCACAGGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
*
126059 CTTAAAAAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
* * * * *
126124 CACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCTCG
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
126189 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
126254 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
126319 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
126384 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
*
126449 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAACTTTTTCTTTCCACTTTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCAC-TTTA
126514 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
585 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
126579 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
650 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
126618 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
126683 TTGATGCTTTTGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
126748 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
126813 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
126878 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
*
126943 CATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
127008 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
127073 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
127138 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTGTTA
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACT-TTA
127203 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
585 TTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCT
*
127268 TTTCAGGATTAGGCACCATAAGCATAATCAATGTTTGGG
650 TTTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
*
127307 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAAGATACATGACA
1 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
127372 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
127437 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
127502 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
196 CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
*
127567 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTT
261 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
127632 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGG-T
326 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
127696 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAA-TTTGACCCTTAAATA
391 TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
* * * * * * *
127760 AGACAAGCATTGATTCTCGTAACAGTCTCCAATCTTTTCAAGTTTGAGAACCGAAAATACAATCC
456 AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
* * * *
127825 CTTCATTAGGATACATGACATTGATGCTTTGGTGTC-ACAGGAGAAGC-TTTTCTTCTTCCA--T
521 CTTTATTAGGATACATGACATTAATGCTTTGGTATCGA-AAGAGAAGCTTTTTC-T-TTCCACTT
* * * * * * * *
127886 TATTGATAGAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGAATACTCATACTAATCC-CTAT
583 TATTGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTC-AT
127950 TCATTTT-AGGATTAGGCACCA
647 TC-TTTTCAGGATTAGGCACCA
127971 CAAACACAGT
Statistics
Matches: 1308, Mismatches: 39, Indels: 16
0.96 0.03 0.01
Matches are distributed among these distances:
684 1 0.00
685 71 0.05
686 10 0.01
687 115 0.09
688 56 0.04
689 1055 0.81
ACGTcount: A:0.33, C:0.19, G:0.15, T:0.33
Consensus pattern (688 bp):
AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
CACAATGTTCTCGTAAGGACACACGATATTGAAGCTTTGGTTTTGCAAGAAACACTTTCTCCCCA
CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
TTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
AGACAAGCATTGATTCTCGTAACAGTCTCCAAACTTTTCAAGATTGGGAGCCAAAAACACATTCC
CTTTATTAGGATACATGACATTAATGCTTTGGTATCGAAAGAGAAGCTTTTTCTTTCCACTTTAT
TGATAGAATCAAAATTAGTCACTTAAATAAGGCAAATATGAATACTCGTACTAAGCCTCATTCTT
TTCAGGATTAGGCACCATAAGCATAATCAAAGTTTGGG
Found at i:127497 original size:212 final size:214
Alignment explanation
Indices: 127106--127497 Score: 562
Period size: 212 Copynumber: 1.8 Consensus size: 214
127096 AGTCTCCAAA
* * * *
127106 CTTTTCAAGATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTTGGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAAGATACATGACATTAATGCTTTGGT
*
127171 ATCGAAAGAGAAGCTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGG
66 ATCGAAAGAGAAGCTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
* * *
127236 CAAATATGAATACTCGTACTAAGCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAATG
131 CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAATG
127301 TTTGGGAACAATCTCTAAT
196 TTTGGGAACAATCTCTAAT
* * *
127320 CTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAAGATACATGACATTGATGCTTTGGT
1 CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAAGATACATGACATTAATGCTTTGGT
* * * * *
127385 GTC-ACAAGAGAAGC-TTTTCTTCTTC-C-GTTATTGATAGAATCAAAGTTTGTCTCTTAAATAA
66 ATCGA-AAGAGAAGCTTTTTCTT-TCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAA
127446 GACAAACATGAATACTCATACTAATCCCT-ATTCATTTT-AGGATTAGGCACCA
129 GACAAACATGAATACTCATACTAA-CCCTCATTC-TTTTCAGGATTAGGCACCA
127498 CAAACACAAT
Statistics
Matches: 158, Mismatches: 16, Indels: 10
0.86 0.09 0.05
Matches are distributed among these distances:
212 71 0.45
213 16 0.10
214 71 0.45
ACGTcount: A:0.34, C:0.18, G:0.15, T:0.33
Consensus pattern (214 bp):
CTTTTCAAGATTGGGAACCAAAAACACAATCCCTTCATTAAGATACATGACATTAATGCTTTGGT
ATCGAAAGAGAAGCTTTTTCTTTCCACTGTTATTGATAGAATCAAAATTAGTCACTTAAATAAGA
CAAACATGAATACTCATACTAACCCTCATTCTTTTCAGGATTAGGCACCATAAGCATAATCAATG
TTTGGGAACAATCTCTAAT
Found at i:129173 original size:473 final size:473
Alignment explanation
Indices: 127307--131260 Score: 7133
Period size: 473 Copynumber: 8.3 Consensus size: 473
127297 AATGTTTGGG
* * * *
127307 AACAATCTCTAATCTTTTCAAGATTGGGAACCGAAAATACAATCCCTTCATTAAGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
127372 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
*
127437 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCAC-AA
* * * *
127502 CACAATGTTCTCGTAAGGACACACGATATTGAA-GCTTTGGTTTTGCAAGAAACACTTTCTCCCC
195 -ACAGTCTTCTCATAAGGACACACGATATT-AATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCC
*
127566 ACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCT
258 ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCT
127631 TCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGG-
323 TCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGT
*
127695 TTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAA-TTTGACCCTTAAAT
388 TTTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
127759 AAGACAAGCATTGATTCTCGT
453 AAGACAAGCATTGATTCTCGT
*
127780 AACAGTCTCCAATCTTTTCAAGTTTGAGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
* * *
127845 TTGATGCTTTGGTGTCACAGGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
* *
127910 CTTAAAAAAGACAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCAC-AA
* * * * *
127975 CACAGTCTTCTCGTAAGGACACACGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTCCTCG
195 -ACAGTCTTCTCATAAGGACACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCA
* *
128040 CCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTT
259 CCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTT
* *
128105 CATTCGTTTTGAGATTAGGCGCTATAAACATATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
324 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
* *
128170 TTCTTTGGCATGGAAAACATTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
389 TTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
128235 AGACAAGCATTGATTCTCGT
454 AGACAAGCATTGATTCTCGT
* * *
128255 AACAGTCTCCAATCTTTTCAAGTTTGAGAACCGAAAATACAATCGCTTCATTAGGATGCATGACA
1 AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
* *
128320 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTCCATTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
* * * *
128385 CTTAAAAAAGATAAACATGAATACTCATACTAATCCCTATTCATTTTAGGATTAGGCACGACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCAC-AA
* * * * *
128450 CACAATGTTCTCGTAAGGACACACGATATTGAA-GCTTTGGTTTCGCAAGAAACACTTTCTCCCC
195 -ACAGTCTTCTCATAAGGACACACGATATT-AATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCC
* *
128514 ACCAATGTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCT
258 ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCT
*
128579 TCATTCGTTTTGAGATTAGGCACTACAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGT
323 TCATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGT
* *
128644 TTTCTTTGGCATGGAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAATGTTTGACCCTTAAAT
388 TTTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAAT
128709 AAGACAAGCATTGATTCTCGT
453 AAGACAAGCATTGATTCTCGT
*
128730 AACAGTCTCTAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
128795 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
128860 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
*
128925 CAGTCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACC
196 CAGTCTTCTCATAAGGACACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACC
128990 AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCA
261 AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCA
129055 TTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT
326 TTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT
129120 CTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAG
391 CTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAG
*
129185 ATAAGCATTGATTCTCGT
456 ACAAGCATTGATTCTCGT
*
129203 AACAGTCTCCAATCTTTTCAAGCTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
129268 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
129333 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
* * *
129398 CAGTCTTCTCATAAGGATACACAATATTAATGCTTTGGTTTTGCAAGAAACGCTATCTCCCCACC
196 CAGTCTTCTCATAAGGACACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACC
129463 AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCA
261 AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCA
129528 TTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT
326 TTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT
129593 CTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAG
391 CTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAG
* *
129658 ATAAGCATTGATACTCGT
456 ACAAGCATTGATTCTCGT
*
129676 AACAGTCTCCAATCTTTTCAAGCTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
129741 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
129806 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
*
129871 CAGTCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACC
196 CAGTCTTCTCATAAGGACACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACC
129936 AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCA
261 AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCA
130001 TTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT
326 TTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT
130066 CTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAG
391 CTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAG
130131 ACAAGCATTGATTCTCGT
456 ACAAGCATTGATTCTCGT
*
130149 AACAGTCTCTAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
130214 TTGATGCTTTGGTATCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
130279 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
*
130344 CAGTCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACC
196 CAGTCTTCTCATAAGGACACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACC
130409 AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCA
261 AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCA
130474 TTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT
326 TTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT
130539 CTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAG
391 CTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAG
*
130604 ATAAGCATTGATTCTCGT
456 ACAAGCATTGATTCTCGT
*
130622 AACAGTCTCCAATCTTTTCAAGCTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
* *
130687 TTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTCTTCCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
* *
130752 CTTGAATAAGACAAACTTGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
131 CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
* * *
130817 CATAGTCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTTGCAAGAGACGCTTTCTCCCCA
196 C--AGTCTTCTCATAAGGACACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCA
130882 CCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTT
259 CCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTT
130947 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
324 CATTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTT
131012 TTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
389 TTCTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATA
131077 AGACAAGCATTGATTCTCGT
454 AGACAAGCATTGATTCTCGT
*
131097 AACAGTCTCTAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
1 AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
*
131162 TTGATGCTTTGGTATCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
66 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
131227 CTTAAATAAGACAAACATGAATACTCATACTAAT
131 CTTAAATAAGACAAACATGAATACTCATACTAAT
131261 GTGCATTTGG
Statistics
Matches: 3387, Mismatches: 87, Indels: 12
0.97 0.02 0.00
Matches are distributed among these distances:
472 3 0.00
473 2229 0.66
474 51 0.02
475 1103 0.33
476 1 0.00
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.34
Consensus pattern (473 bp):
AACAGTCTCCAATCTTTTCAAGTTTGGGAACCGAAAATACAATCCCTTCATTAGGATACATGACA
TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTCTTTCGTTATTGATAGAATCAAAGTTTGTCT
CTTAAATAAGACAAACATGAATACTCATACTAATCCCTACTCATTTTAGGATTAGGCACCACAAA
CAGTCTTCTCATAAGGACACACGATATTAATGCTTTGGTTTTGCAAGAAACGCTTTCTCCCCACC
AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACAAGGATTTGAACAATGATCTTCA
TTCGTTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGGTAAATGTTATTGATGGTTTT
CTTTGGCATGAAAAACTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTTGACCCTTAAATAAG
ACAAGCATTGATTCTCGT
Found at i:130488 original size:156 final size:155
Alignment explanation
Indices: 128909--130968 Score: 425
Period size: 158 Copynumber: 13.1 Consensus size: 155
128899 CTCATTTTAG
*
128909 GATTAGGCACCACAAACAGTCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGAA
1 GATTAGGCACCACAAACAATCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGAA
*
128974 ACGCTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA-AGAGACAAACAAGGAT
66 ACGCTTTCTCCCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTCAAATA-AGACAAACAAGGAT
129038 TTGAACAATGATCT-TCATTCGTTTTGA
130 TTGAAC-ATGATCTCT-ATTCGTTTTGA
* * * * * * * * * * ** * *
129065 GATTAGGCACTATAAACACAT-TATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCAT
1 GATTAGGCACCACAAACA-ATCT-T-CTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAA
** * *** * * * ** * * *
129129 GAAAAACTTTTATTTGC-CCTATTTTCCT-TAAAATCAAAGTTTGACCCTTAAATAAGATAAGCA
63 GAAACGC-TTTCTCCCCACCAATTTT--TGTAAAGTCAAAGTTCGTGCCTCAAATAAGACAAACA
** * * *
129192 TTGATTCTCGTAACA-G-TCTCCAATC-TTTTCAA
125 AGGATT-T-G-AACATGATCTCTATTCGTTTT-GA
* * * * * * * * * * **
129224 GCTTGGGAACCGAAAATACAATC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAA
1 GATTAGGCACC-ACAA-ACAATCTTC-TCATAAGGATACACGATATTAATGCTTTGGTTTTGCAA
* *** * * * *
129288 GAGAA-GCTTT-TCTTCTTTC-GTTATTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAA
63 GA-AACGCTTTCTC-CCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-CTCAAATAAGACAAA
* * * * * * * *
129348 CATGAATACTCATAC-TAATCCCTACTCATTTT-A
123 CAAGGAT-TTGA-ACATGATCTCTATTCGTTTTGA
* *
129381 GGATTAGGCACCACAAACAGTCTTCTCATAAGGATACACAATATTAATGCTTTGGTTTTGCAAGA
1 -GATTAGGCACCACAAACAATCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGA
* *
129446 AACGCTATCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA-AGAGACAAACAAGGA
65 AACGCTTTCTCCCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTCAAATA-AGACAAACAAGGA
129510 TTTGAACAATGATCT-TCATTCGTTTTGA
129 TTTGAAC-ATGATCTCT-ATTCGTTTTGA
* * * * * * * * * * ** * *
129538 GATTAGGCACTATAAACACAT-TATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCAT
1 GATTAGGCACCACAAACA-ATCT-T-CTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAA
** * *** * * * ** * * *
129602 GAAAAACTTTTATTTGC-CCTATTTTCCT-TAAAATCAAAGTTTGACCCTTAAATAAGATAAGCA
63 GAAACGC-TTTCTCCCCACCAATTTT--TGTAAAGTCAAAGTTCGTGCCTCAAATAAGACAAACA
** * * * *
129665 TTGATACTCGTAACA-G-TCTCCAATC-TTTTCAA
125 AGGAT--TTG-AACATGATCTCTATTCGTTTT-GA
* * * * * * * * * * **
129697 GCTTGGGAACCGAAAATACAATC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAA
1 GATTAGGCACC-ACAA-ACAATCTTC-TCATAAGGATACACGATATTAATGCTTTGGTTTTGCAA
* *** * * * *
129761 GAGAA-GCTTT-TCTTCTTTC-GTTATTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAA
63 GA-AACGCTTTCTC-CCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-CTCAAATAAGACAAA
* * * * * * * *
129821 CATGAATACTCATAC-TAATCCCTACTCATTTT-A
123 CAAGGAT-TTGA-ACATGATCTCTATTCGTTTTGA
*
129854 GGATTAGGCACCACAAACAGTCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGA
1 -GATTAGGCACCACAAACAATCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGA
*
129919 AACGCTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA-AGAGACAAACAAGGA
65 AACGCTTTCTCCCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTCAAATA-AGACAAACAAGGA
129983 TTTGAACAATGATCT-TCATTCGTTTTGA
129 TTTGAAC-ATGATCTCT-ATTCGTTTTGA
* * * * * * * * * * ** * *
130011 GATTAGGCACTATAAACACAT-TATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCAT
1 GATTAGGCACCACAAACA-ATCT-T-CTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAA
** * *** * * * ** * *
130075 GAAAAACTTTTATTTGC-CCTATTTTCCT-TAAAATCAAAGTTTGACCCTTAAATAAGACAAGCA
63 GAAACGC-TTTCTCCCCACCAATTTT--TGTAAAGTCAAAGTTCGTGCCTCAAATAAGACAAACA
** * *
130138 TTGATTCTCGTAACA-G-TCTCTAATC-TTTTCAA
125 AGGATT-T-G-AACATGATCTCTATTCGTTTT-GA
* * * * * * * * * * **
130170 GTTTGGGAACCGAAAATACAATC-CCTTCATTAGGATACATGACATTGATGCTTTGGTATCACAA
1 GATTAGGCACC-ACAA-ACAATCTTC-TCATAAGGATACACGATATTAATGCTTTGGTTTTGCAA
* *** * * * *
130234 GAGAA-GCTTT-TCTTCTTTC-GTTATTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAA
63 GA-AACGCTTTCTC-CCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-CTCAAATAAGACAAA
* * * * * * * *
130294 CATGAATACTCATAC-TAATCCCTACTCATTTT-A
123 CAAGGAT-TTGA-ACATGATCTCTATTCGTTTTGA
*
130327 GGATTAGGCACCACAAACAGTCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGA
1 -GATTAGGCACCACAAACAATCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGA
*
130392 AACGCTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA-AGAGACAAACAAGGA
65 AACGCTTTCTCCCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTCAAATA-AGACAAACAAGGA
130456 TTTGAACAATGATCT-TCATTCGTTTTGA
129 TTTGAAC-ATGATCTCT-ATTCGTTTTGA
* * * * * * * * * * ** * *
130484 GATTAGGCACTATAAACACAT-TATCCTCTTTAGGGTAAATGTTATTGATGGTTTTCTTTGGCAT
1 GATTAGGCACCACAAACA-ATCT-T-CTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAA
** * *** * * * ** * * *
130548 GAAAAACTTTTATTTGC-CCTATTTTCCT-TAAAATCAAAGTTTGACCCTTAAATAAGATAAGCA
63 GAAACGC-TTTCTCCCCACCAATTTT--TGTAAAGTCAAAGTTCGTGCCTCAAATAAGACAAACA
** * * *
130611 TTGATTCTCGTAACA-G-TCTCCAATC-TTTTCAA
125 AGGATT-T-G-AACATGATCTCTATTCGTTTT-GA
* * * * * * * * * * **
130643 GCTTGGGAACCGAAAATACAATC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAA
1 GATTAGGCACC-ACAA-ACAATCTTC-TCATAAGGATACACGATATTAATGCTTTGGTTTTGCAA
* * ** * * * **
130707 GAAAAGCTTT-TCTTCTTCC-GTTATTGATAGAA-TCAAAGTTTGT-CTCTTGAATAAGACAAAC
63 GAAACGCTTTCTC-CCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-CTCAAATAAGACAAAC
** * * * * * * *
130768 TTGAATACTCATAC-TAATCCCTACTCATTTT-A
124 AAGGAT-TTGA-ACATGATCTCTATTCGTTTTGA
* * *
130800 GGATTAGGCACCACAAACATAGTCTTCTCGTAAGGACACACGATATTAAAGCTTTGGTTTTGCAA
1 -GATTAGGCACCACAAACA-A-TCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAA
* *
130865 GAGACGCTTTCTCCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA-AGAGACAAACAAG
63 GAAACGCTTTCTCCCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTCAAATA-AGACAAACAAG
130929 GATTTGAACAATGATCT-TCATTCGTTTTGA
127 GATTTGAAC-ATGATCTCT-ATTCGTTTTGA
130959 GATTAGGCAC
1 GATTAGGCAC
130969 TATAAACACA
Statistics
Matches: 1332, Mismatches: 413, Indels: 316
0.65 0.20 0.15
Matches are distributed among these distances:
154 6 0.00
155 24 0.02
156 331 0.25
157 77 0.06
158 470 0.35
159 349 0.26
160 42 0.03
161 21 0.02
162 12 0.01
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.34
Consensus pattern (155 bp):
GATTAGGCACCACAAACAATCTTCTCATAAGGATACACGATATTAATGCTTTGGTTTTGCAAGAA
ACGCTTTCTCCCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTCAAATAAGACAAACAAGGATT
TGAACATGATCTCTATTCGTTTTGA
Found at i:131865 original size:476 final size:475
Alignment explanation
Indices: 131285--132888 Score: 2507
Period size: 477 Copynumber: 3.4 Consensus size: 475
131275 GAAATGAATA
* * * * *
131285 TCCTCATTAGGATAAATGAATATTGATGGTTTTCTTTGGCATGGAAATCTTTTCTTTGCCCTATT
1 TCCTCATTAGGATAAATGAAGATTAATGGTTTCCATTGGCATGGAAATATTTTCTTTGCCCTATT
* **
131350 TTCCTTAAAATCAAAGTTTGACCCTTAAATGAGACAAGCATTGATTCTTGTAAAAGTCTCCATTC
66 TTCCTTAAAATCAAAGTTTGACCCTTAAATGAGACAAGCACTGATTCTCATAAAAGTCTCCATTC
*
131415 TTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGCG
131 TTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
*
131480 CCACACGAAAAGGTATTCTTTTCGCTATTATTGATAGAATCAATGTTTATCTCTTAAATAAGACA
196 TCACACGAAAAGGT-TTCTTTTCGCTATTATTGATAGAATCAATGTTTATCTCTTAAATAAGACA
131545 AACATGAATACTCATACTAAGCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCA
260 AACATGAATACTCATACTAAGCCCCATTCTTTT-AGGATTAGGCACCATAAACATAGTCTTCTCA
* * *
131610 TTAGGATACATGGTATTGATGCTTTGGTGTCGCAAGAAATACTTTCTTCCTACCAATTTTTGAAA
324 TAAGGATACATGGTATTGATGCTTTGGTTTCGCAAGAAATACTTTCTTCCAACCAATTTTTGAAA
131675 AGCCTAAGTTCATGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTTATTGGTTTTGAG
389 AGCCTAAGTTCATGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTTATTGGTTTTGAG
131740 ATTAGGCACTGTAAACATATTC
454 ATTAGGCACTGTAAACATATTC
131762 TCCTCATTAGGATAAATG-AGATTAATGGTTTCCATTGGCATGGAAATATTTTCTTTGCCCTATT
1 TCCTCATTAGGATAAATGAAGATTAATGGTTTCCATTGGCATGGAAATATTTTCTTTGCCCTATT
*
131826 TTCCTTAAAATCAAAGTTTGACCCTTAAATGAGACAAGCACTGATTCTCATAAATGTCTCCATTC
66 TTCCTTAAAATCAAAGTTTGACCCTTAAATGAGACAAGCACTGATTCTCATAAAAGTCTCCATTC
*
131891 TTTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAAGATACATGACATTGATGCTTTGG
131 --TTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGG
* * * * * *
131956 TGTCGCGA-GAGAAGCTTT-TCTTC-CATCGTTATTGATAGAATCAATGTTTGTCTCTTAAATAA
194 TGTCAC-ACGAAAAGGTTTCTTTTCGC-T-ATTATTGATAGAATCAATGTTTATCTCTTAAATAA
* * *
132018 GACAAACATGAATACTCATACTAATCCCCATTCATTTTAGGATTAGGCACCACAAACACAGTCTT
256 GACAAACATGAATACTCATACTAAGCCCCATTC-TTTTAGGATTAGGCACCATAAACATAGTCTT
* * * *
132083 CCCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACATTTTCTTCCAACCAATTTTT
320 CTCATAAGGATACATGGTATTGATGCTTTGGTTTCGCAAGAAATACTTTCTTCCAACCAATTTTT
* * * *
132148 CAGAAGCCTAAGTTCATCCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTTTTTGGTTT
385 GAAAAGCCTAAGTTCATGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTTATTGGTTT
* *
132213 TGAGATTAGGCACTATAAACATGTTC
450 TGAGATTAGGCACTGTAAACATATTC
* * * * * * *
132239 TCCTCATTAGGATAAAAGAATATTGATGGTTTTCTTTGGCTTGGAAATTTTTTCTTTGCCCTATT
1 TCCTCATTAGGATAAATGAAGATTAATGGTTTCCATTGGCATGGAAATATTTTCTTTGCCCTATT
* * *
132304 TTCCTTAAAATCAAAGTTTGACCCTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCAATC
66 TTCCTTAAAATCAAAGTTTGACCCTTAAATGAGACAAGCACTGATTCTCATAAAAGTCTCCATTC
* *
132369 TTTTCAAGATTGGGAACCAAAAACACATTCCATTCATTAGGATACATGACATTGATGCCTTGGTG
131 TTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * *
132434 TCACACGATAAGGTTTTCTTTTCGCTATTATTGGTAGAATCAAAGTTTATCTTTTAAATAAGACA
196 TCACACGAAAAGG-TTTCTTTTCGCTATTATTGATAGAATCAATGTTTATCTCTTAAATAAGACA
* * *
132499 AAGATAAATACTCATACTAAGCCCTATTCTTTTGAGGATTAGGCACCATAAACATAGTCTTCTCA
260 AACATGAATACTCATACTAAGCCCCATTCTTTT-AGGATTAGGCACCATAAACATAGTCTTCTCA
* * * *
132564 TAAAGATACCTGGTATTGATGCTTTGGTTTTGCAAGAAATACTTTCTTCCCACCAATTTTTGAAA
324 TAAGGATACATGGTATTGATGCTTTGGTTTCGCAAGAAATACTTTCTTCCAACCAATTTTTGAAA
* *
132629 AGCCTAAGTACATGCCTTAAAAGAGACAAACAAGGATTCGAACAATGATCTTTATTGGTTTTGAG
389 AGCCTAAGTTCATGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTTATTGGTTTTGAG
132694 ATTAGGCACTGTAAACATATTC
454 ATTAGGCACTGTAAACATATTC
* *
132716 TCCTCATTAGGATAAATG-AGATTAATGGTTTCCATTGGCATGGAAATATTTTTTTTGCCTTATT
1 TCCTCATTAGGATAAATGAAGATTAATGGTTTCCATTGGCATGGAAATATTTTCTTTGCCCTATT
*
132780 TTCCTTAAAATCAAAGTTTGACCCTTAAATGAGACAAGCACTGATTCTTATAAAAGTCTCCATTC
66 TTCCTTAAAATCAAAGTTTGACCCTTAAATGAGACAAGCACTGATTCTCATAAAAGTCTCCATTC
*
132845 TTTTCAAGACTGGGAACCAAAAACACATTCCCTTCATTAAGGAT
131 TTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATT-AGGAT
132889 TCGAACAATG
Statistics
Matches: 1020, Mismatches: 94, Indels: 26
0.89 0.08 0.02
Matches are distributed among these distances:
475 2 0.00
476 316 0.31
477 519 0.51
478 181 0.18
479 2 0.00
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.34
Consensus pattern (475 bp):
TCCTCATTAGGATAAATGAAGATTAATGGTTTCCATTGGCATGGAAATATTTTCTTTGCCCTATT
TTCCTTAAAATCAAAGTTTGACCCTTAAATGAGACAAGCACTGATTCTCATAAAAGTCTCCATTC
TTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
TCACACGAAAAGGTTTCTTTTCGCTATTATTGATAGAATCAATGTTTATCTCTTAAATAAGACAA
ACATGAATACTCATACTAAGCCCCATTCTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATA
AGGATACATGGTATTGATGCTTTGGTTTCGCAAGAAATACTTTCTTCCAACCAATTTTTGAAAAG
CCTAAGTTCATGCCTCAAAAGAGACAAACAAGGATTCGAACAATGATCTTTATTGGTTTTGAGAT
TAGGCACTGTAAACATATTC
Found at i:134067 original size:28 final size:29
Alignment explanation
Indices: 134006--134087 Score: 96
Period size: 28 Copynumber: 2.9 Consensus size: 29
133996 TTTTGGAGAT
* * *
134006 AATAACGGGGTTGGAGTGTTCCC-TTGGA
1 AATAACGGGGTTGGAGTATCCCCGATGGA
*
134034 AGTAACGGGGTTGGAGTATCCCCGAT-GA
1 AATAACGGGGTTGGAGTATCCCCGATGGA
* *
134062 AATAACGAGGTTGGAGTATCCTCGAT
1 AATAACGGGGTTGGAGTATCCCCGAT
134088 TGTGAAAAAT
Statistics
Matches: 46, Mismatches: 7, Indels: 2
0.84 0.13 0.04
Matches are distributed among these distances:
28 45 0.98
29 1 0.02
ACGTcount: A:0.26, C:0.16, G:0.33, T:0.26
Consensus pattern (29 bp):
AATAACGGGGTTGGAGTATCCCCGATGGA
Found at i:134131 original size:52 final size:51
Alignment explanation
Indices: 134070--134292 Score: 259
Period size: 52 Copynumber: 4.3 Consensus size: 51
134060 GAAATAACGA
* *
134070 GGTTGGAGTATCCTCGATTGTGAAAAATTGGTGTTTTTGGAAATAAAATCGG
1 GGTTGGAGTATCCCCGATTGTGAAAAATTAGTG-TTTTGGAAATAAAATCGG
* * * *
134122 AGTTGGAGTATCCCCGATTAAAG-GAGAAATTGGTGTTTTGAAAATAAAATCGG
1 GGTTGGAGTATCCCCGATT---GTGAAAAATTAGTGTTTTGGAAATAAAATCGG
* * *
134175 GGTTGGAGTATCCCCGATTGTGGAAAAATTAGTGTTTTAGCAATAAAACCGG
1 GGTTGGAGTATCCCCGATTGT-GAAAAATTAGTGTTTTGGAAATAAAATCGG
* * * * * *
134227 GGTTGGAGTATCCCCTATTATGAAAAATCAATATTTTGGAAATAAAGTCGG
1 GGTTGGAGTATCCCCGATTGTGAAAAATTAGTGTTTTGGAAATAAAATCGG
134278 GGTTGGAGTATCCCC
1 GGTTGGAGTATCCCC
134293 TCAGAAATAA
Statistics
Matches: 146, Mismatches: 20, Indels: 11
0.82 0.11 0.06
Matches are distributed among these distances:
50 1 0.01
51 38 0.26
52 60 0.41
53 35 0.24
54 11 0.08
55 1 0.01
ACGTcount: A:0.31, C:0.12, G:0.26, T:0.30
Consensus pattern (51 bp):
GGTTGGAGTATCCCCGATTGTGAAAAATTAGTGTTTTGGAAATAAAATCGG
Found at i:134184 original size:105 final size:103
Alignment explanation
Indices: 134070--134292 Score: 277
Period size: 105 Copynumber: 2.1 Consensus size: 103
134060 GAAATAACGA
* * * *
134070 GGTTGGAGTATCCTCGATTGT-GAAAAATTGGTGTTTTTGGAAATAAAATCGGAGTTGGAGTATC
1 GGTTGGAGTATCCCCGATTGTGGAAAAATTAGTG-TTTTAGAAATAAAACCGGAGTTGGAGTATC
* *** *
134134 CCCGATTAAAGGAGAAATTGGTGTTTTGAAAATAAAATCGG
65 CCCGATT--AGGAAAAATCAATATTTTGAAAATAAAATCGG
* *
134175 GGTTGGAGTATCCCCGATTGTGGAAAAATTAGTGTTTTAGCAATAAAACCGGGGTTGGAGTATCC
1 GGTTGGAGTATCCCCGATTGTGGAAAAATTAGTGTTTTAGAAATAAAACCGGAGTTGGAGTATCC
* * * *
134240 CCTATTATGAAAAATCAATATTTTGGAAATAAAGTCGG
66 CCGATTAGGAAAAATCAATATTTTGAAAATAAAATCGG
134278 GGTTGGAGTATCCCC
1 GGTTGGAGTATCCCC
134293 TCAGAAATAA
Statistics
Matches: 102, Mismatches: 15, Indels: 4
0.84 0.12 0.03
Matches are distributed among these distances:
103 39 0.38
105 52 0.51
106 11 0.11
ACGTcount: A:0.31, C:0.12, G:0.26, T:0.30
Consensus pattern (103 bp):
GGTTGGAGTATCCCCGATTGTGGAAAAATTAGTGTTTTAGAAATAAAACCGGAGTTGGAGTATCC
CCGATTAGGAAAAATCAATATTTTGAAAATAAAATCGG
Found at i:134338 original size:27 final size:28
Alignment explanation
Indices: 134278--134350 Score: 96
Period size: 27 Copynumber: 2.6 Consensus size: 28
134268 ATAAAGTCGG
* *
134278 GGTTGGAGTATCCCCTCA-GAAATAACGG
1 GGTTGGAGTATCCCC-GATGAAATAACGA
*
134306 GGTTGGAGTATCCCCGATG-ATTAACGA
1 GGTTGGAGTATCCCCGATGAAATAACGA
134333 GGTTGGAGTATCCCCGAT
1 GGTTGGAGTATCCCCGAT
134351 TATAGAAAAT
Statistics
Matches: 41, Mismatches: 3, Indels: 3
0.87 0.06 0.06
Matches are distributed among these distances:
27 25 0.61
28 16 0.39
ACGTcount: A:0.25, C:0.21, G:0.30, T:0.25
Consensus pattern (28 bp):
GGTTGGAGTATCCCCGATGAAATAACGA
Found at i:136785 original size:13 final size:13
Alignment explanation
Indices: 136767--136792 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
136757 ACAAAGATCC
136767 ATGTATCGATACA
1 ATGTATCGATACA
136780 ATGTATCGATACA
1 ATGTATCGATACA
136793 CAGAAAAATG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:136788 original size:33 final size:33
Alignment explanation
Indices: 136746--136812 Score: 98
Period size: 33 Copynumber: 2.0 Consensus size: 33
136736 AAAATTTCCA
***
136746 AATGTATCGATACAAAGATCCATGTATCGATAC
1 AATGTATCGATACAAAGAAAAATGTATCGATAC
*
136779 AATGTATCGATACACAGAAAAATGTATCGATAC
1 AATGTATCGATACAAAGAAAAATGTATCGATAC
136812 A
1 A
136813 TTTCCTTGGC
Statistics
Matches: 30, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
33 30 1.00
ACGTcount: A:0.43, C:0.16, G:0.15, T:0.25
Consensus pattern (33 bp):
AATGTATCGATACAAAGAAAAATGTATCGATAC
Found at i:136856 original size:19 final size:18
Alignment explanation
Indices: 136832--136899 Score: 83
Period size: 19 Copynumber: 3.9 Consensus size: 18
136822 CAGTAGCTAA
136832 TTATGTATCGATACAATAC
1 TTATGTATCGATACAA-AC
136851 TTATGTATCGATAC--A-
1 TTATGTATCGATACAAAC
136866 -T-TGTATCGATACAAAAC
1 TTATGTATCGATAC-AAAC
136883 TTATGTATCGATACAAA
1 TTATGTATCGATACAAA
136900 TTGTTGAATT
Statistics
Matches: 43, Mismatches: 0, Indels: 13
0.77 0.00 0.23
Matches are distributed among these distances:
13 11 0.26
14 1 0.02
16 2 0.05
18 4 0.09
19 25 0.58
ACGTcount: A:0.38, C:0.15, G:0.12, T:0.35
Consensus pattern (18 bp):
TTATGTATCGATACAAAC
Found at i:136872 original size:13 final size:13
Alignment explanation
Indices: 136854--136878 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
136844 ACAATACTTA
136854 TGTATCGATACAT
1 TGTATCGATACAT
136867 TGTATCGATACA
1 TGTATCGATACA
136879 AAACTTATGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:136876 original size:32 final size:32
Alignment explanation
Indices: 136835--136897 Score: 117
Period size: 32 Copynumber: 2.0 Consensus size: 32
136825 TAGCTAATTA
*
136835 TGTATCGATACAATACTTATGTATCGATACAT
1 TGTATCGATACAAAACTTATGTATCGATACAT
136867 TGTATCGATACAAAACTTATGTATCGATACA
1 TGTATCGATACAAAACTTATGTATCGATACA
136898 AATTGTTGAA
Statistics
Matches: 30, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
32 30 1.00
ACGTcount: A:0.37, C:0.16, G:0.13, T:0.35
Consensus pattern (32 bp):
TGTATCGATACAAAACTTATGTATCGATACAT
Found at i:137806 original size:55 final size:55
Alignment explanation
Indices: 137722--138435 Score: 1016
Period size: 55 Copynumber: 13.0 Consensus size: 55
137712 ATAAAGTGTA
* * * * *
137722 TCCTGCTCATTGAGGAGT-AAAAAGTGCCACCAACTCGTGTGGGCTTTGAAAGGCG
1 TCCTGCTCTTTGAGGACTGGAAAA-TGCCACCAACTTGTGTGGGCTTTGAAAGGTG
* *
137777 TCCTGCTCTTTGAGGACT-GAAAGGTGCCACCAACTTGCGTGGGCTTT-AAGAGGTG
1 TCCTGCTCTTTGAGGACTGGAAA-ATGCCACCAACTTGTGTGGGCTTTGAA-AGGTG
* *
137832 TCCTGCTCTTTGAGGATTGAAAAATGCCACCAACTTGTGTGGGCTTTGAAAGGTG
1 TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTGTGTGGGCTTTGAAAGGTG
* *
137887 TCCTGCTCTTTGGGGACT-GAAAGGTGCCACCAACTTGTGTGGGCTTT-AAGAGGTG
1 TCCTGCTCTTTGAGGACTGGAAA-ATGCCACCAACTTGTGTGGGCTTTGAA-AGGTG
* * *
137942 TCCTACTCTTTGAGGACTGGAAAATGCCACCAACTTGGGTGGGCTTTGACAGGTG
1 TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTGTGTGGGCTTTGAAAGGTG
* *
137997 TCCTGCTCTTTGGGGACT-GAAAGGTGCCACCAACTTGTGTGGGCTTT-AAGAGGTG
1 TCCTGCTCTTTGAGGACTGGAAA-ATGCCACCAACTTGTGTGGGCTTTGAA-AGGTG
* *
138052 TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTGGGTGGGCTTTGAAAGGTA
1 TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTGTGTGGGCTTTGAAAGGTG
*
138107 TCCTGCTCTTTGAGGACTGGAAAATGCCACTAACTTGTGTGGGCTTTGAAAGGTG
1 TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTGTGTGGGCTTTGAAAGGTG
* *
138162 TCCTGCTCTTTGGGGACT-GAAAGGTGCCACCAACTTGTGTGGGCTTT-AAGAGGTG
1 TCCTGCTCTTTGAGGACTGGAAA-ATGCCACCAACTTGTGTGGGCTTTGAA-AGGTG
138217 TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTG-GTTGGGCTTTGAAAGGTG
1 TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTGTG-TGGGCTTTGAAAGGTG
* * *
138272 TCCTACTCTTTGAGGATTGGAAAATGCCACCAACTTGGGTGGGCTTTGAAAGGTG
1 TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTGTGTGGGCTTTGAAAGGTG
* *
138327 TCATGCTCTTTGAGGACTGGAAAATGCCACCAACTTGTGTGGGCTTTGAGAGGTG
1 TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTGTGTGGGCTTTGAAAGGTG
*
138382 TCCTACTCTTTGAGGACTGGAAAAGTGCCACCAACTTGTGTGGGCTTTGAAAGG
1 TCCTGCTCTTTGAGGACTGGAAAA-TGCCACCAACTTGTGTGGGCTTTGAAAGG
138436 AAAAAGCATC
Statistics
Matches: 593, Mismatches: 47, Indels: 37
0.88 0.07 0.05
Matches are distributed among these distances:
54 19 0.03
55 523 0.88
56 51 0.09
ACGTcount: A:0.22, C:0.20, G:0.30, T:0.28
Consensus pattern (55 bp):
TCCTGCTCTTTGAGGACTGGAAAATGCCACCAACTTGTGTGGGCTTTGAAAGGTG
Found at i:139450 original size:1 final size:1
Alignment explanation
Indices: 139446--139515 Score: 50
Period size: 1 Copynumber: 70.0 Consensus size: 1
139436 CTTTTCTCTC
* * * * ** ** **
139446 TTTTTCTTTGTTTTGTTTTTTTGTTTTTTTTTTTCCTTTTTTTTTTTGCTTTTTGCTTTTTTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
139511 TTTTT
1 TTTTT
139516 AAGAGAAGGT
Statistics
Matches: 53, Mismatches: 16, Indels: 0
0.77 0.23 0.00
Matches are distributed among these distances:
1 53 1.00
ACGTcount: A:0.00, C:0.07, G:0.07, T:0.86
Consensus pattern (1 bp):
T
Found at i:139470 original size:13 final size:12
Alignment explanation
Indices: 139446--139515 Score: 70
Period size: 13 Copynumber: 5.5 Consensus size: 12
139436 CTTTTCTCTC
*
139446 TTTTTCTTTGTT
1 TTTTTTTTTGTT
139458 TTGTTTTTTTGTT
1 TT-TTTTTTTGTT
*
139471 TTTTTTTTTCCTT
1 TTTTTTTTT-GTT
139484 TTTTTTTTTGCTT
1 TTTTTTTTTG-TT
139497 TTTGCTTTTTT-TT
1 TTT--TTTTTTGTT
139510 TTTTTT
1 TTTTTT
139516 AAGAGAAGGT
Statistics
Matches: 50, Mismatches: 3, Indels: 11
0.78 0.05 0.17
Matches are distributed among these distances:
11 3 0.06
12 9 0.18
13 32 0.64
15 6 0.12
ACGTcount: A:0.00, C:0.07, G:0.07, T:0.86
Consensus pattern (12 bp):
TTTTTTTTTGTT
Found at i:139472 original size:39 final size:40
Alignment explanation
Indices: 139429--139515 Score: 106
Period size: 41 Copynumber: 2.2 Consensus size: 40
139419 GCTTAAGTAG
139429 GTTTTTTCTTTTCTCTCTTTTTCTTTG-TTTTG-TTTTTTT
1 GTTTTTTCTTTTC-CTCTTTTTCTTTGCTTTTGCTTTTTTT
* * *
139468 GTTTTTTTTTTTCCTTTTTTTTTTTGCTTTTTGCTTTTTTT
1 GTTTTTTCTTTTCCTCTTTTTCTTTGC-TTTTGCTTTTTTT
*
139509 TTTTTTT
1 GTTTTTT
139516 AAGAGAAGGT
Statistics
Matches: 41, Mismatches: 4, Indels: 4
0.84 0.08 0.08
Matches are distributed among these distances:
38 11 0.27
39 12 0.29
40 5 0.12
41 13 0.32
ACGTcount: A:0.00, C:0.10, G:0.07, T:0.83
Consensus pattern (40 bp):
GTTTTTTCTTTTCCTCTTTTTCTTTGCTTTTGCTTTTTTT
Found at i:139473 original size:38 final size:40
Alignment explanation
Indices: 139431--139515 Score: 97
Period size: 38 Copynumber: 2.2 Consensus size: 40
139421 TTAAGTAGGT
139431 TTTTTCTTTTCT-CTCTTTTTCTTTG-TTTTG-TTTTTTTG
1 TTTTT-TTTTCTCCTCTTTTTCTTTGCTTTTGCTTTTTTTG
* * *
139469 TTTTTTTTTTTCCTTTTTTTTTTTGCTTTTTGCTTTTTTT-
1 TTTTTTTTTCTCCTCTTTTTCTTTGC-TTTTGCTTTTTTTG
139509 TTTTTTT
1 TTTTTTT
139516 AAGAGAAGGT
Statistics
Matches: 40, Mismatches: 3, Indels: 6
0.82 0.06 0.12
Matches are distributed among these distances:
37 5 0.12
38 16 0.40
40 12 0.30
41 7 0.17
ACGTcount: A:0.00, C:0.11, G:0.06, T:0.84
Consensus pattern (40 bp):
TTTTTTTTTCTCCTCTTTTTCTTTGCTTTTGCTTTTTTTG
Found at i:139474 original size:25 final size:23
Alignment explanation
Indices: 139446--139515 Score: 77
Period size: 25 Copynumber: 2.9 Consensus size: 23
139436 CTTTTCTCTC
*
139446 TTTTTCTTTGTTTTGTTTTTTTGTT
1 TTTTTCTTT-TTTT-TTTTTTTGCT
*
139471 TTTTTTTTTCCTTTTTTTTTTTGCT
1 TTTTTCTTT--TTTTTTTTTTTGCT
*
139496 TTTTGCTTTTTTTTTTTTTT
1 TTTTTCTTTTTTTTTTTTTT
139516 AAGAGAAGGT
Statistics
Matches: 39, Mismatches: 5, Indels: 4
0.81 0.10 0.08
Matches are distributed among these distances:
23 11 0.28
25 24 0.62
26 4 0.10
ACGTcount: A:0.00, C:0.07, G:0.07, T:0.86
Consensus pattern (23 bp):
TTTTTCTTTTTTTTTTTTTTGCT
Found at i:139485 original size:20 final size:19
Alignment explanation
Indices: 139462--139515 Score: 72
Period size: 20 Copynumber: 2.7 Consensus size: 19
139452 TTTGTTTTGT
139462 TTTTTTGTTTTTTTTTTTCC
1 TTTTTT-TTTTTTTTTTTCC
* *
139482 TTTTTTTTTTTGCTTTTTGC
1 TTTTTTTTTTT-TTTTTTCC
139502 TTTTTTTTTTTTTT
1 TTTTTTTTTTTTTT
139516 AAGAGAAGGT
Statistics
Matches: 30, Mismatches: 3, Indels: 3
0.83 0.08 0.08
Matches are distributed among these distances:
19 7 0.23
20 23 0.77
ACGTcount: A:0.00, C:0.07, G:0.06, T:0.87
Consensus pattern (19 bp):
TTTTTTTTTTTTTTTTTCC
Done.