Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2350
Parameters: 2 7 7 80 10 50 1000
Length:  8839

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2948--3038
1
91.0
1
77
0
74
86
5
7
0
0.69
2947--3038
33
2.7
35
91
6
154
85
5
8
0
0.72
2947--3038
35
2.7
34
93
5
152
85
5
8
0
0.72
4956--5012
25
2.3
24
82
8
62
26
5
7
61
1.43
6420--6522
15
7.2
14
72
15
52
33
16
19
30
1.94
6432--6512
29
2.8
30
83
5
96
33
17
19
29
1.95
6466--6538
15
4.9
15
76
8
69
30
19
21
28
1.98
6497--6611
15
7.5
15
75
13
67
35
20
18
26
1.95
6538--6583
14
3.2
14
84
6
56
39
17
19
23
1.92
7137--7433
66
4.5
67
75
9
191
36
17
24
21
1.95
7170--7432
66
4.0
68
77
6
263
34
17
25
23
1.96
7159--7432
132
2.1
134
83
2
347
34
17
24
22
1.96
7203--7460
66
3.9
65
76
6
223
35
18
23
22
1.96

Tables:   1

The End!