Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2352
Parameters: 2 7 7 80 10 50 1000
Length:  22947

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1973--2262
138
2.1
133
81
6
323
50
12
5
31
1.64
2960--3035
22
3.4
22
75
14
66
59
10
0
30
1.31
3286--3315
16
1.9
16
93
6
53
33
0
0
66
0.92
12892--12932
2
20.5
2
100
0
82
51
0
48
0
1.00
18216--18248
14
2.4
14
90
5
50
21
0
0
78
0.75
18522--18570
21
2.4
20
81
18
57
44
0
0
55
0.99
18522--18570
19
2.4
19
81
18
55
44
0
0
55
0.99
18850--18888
18
2.1
18
90
4
60
35
0
2
61
1.10
19197--19230
2
17.0
2
93
0
59
47
0
0
52
1.00
19364--19428
23
3.1
21
74
10
53
41
4
6
47
1.49
19438--19516
31
2.6
30
76
15
81
56
2
1
39
1.21
22323--22375
19
2.8
19
88
0
70
39
15
11
33
1.83
22909--22947
20
2.0
20
85
10
53
33
2
0
64
1.08

Tables:   1

The End!