Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2353
Parameters: 2 7 7 80 10 50 1000
Length:  22469

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
708--783
27
2.8
27
84
4
91
25
9
21
44
1.81
740--809
27
2.8
24
83
14
72
27
10
18
44
1.81
888--921
13
2.6
13
100
0
68
8
41
5
44
1.60
1847--1883
17
2.2
17
95
0
65
27
21
21
29
1.99
4533--4572
16
2.6
16
92
4
64
27
22
15
35
1.94
4992--5099
14
8.1
14
74
22
72
37
0
0
62
1.02
4993--5112
32
3.8
30
74
21
95
36
0
1
61
1.06
5034--5099
28
2.4
28
87
7
91
34
0
0
65
0.93
5004--5110
14
7.8
14
76
16
73
35
0
1
62
1.06
5016--5106
9
9.8
9
71
21
55
34
0
2
63
1.06
5728--5799
27
2.7
27
80
8
85
29
6
16
47
1.73
10257--10324
27
2.5
27
100
0
136
25
7
20
47
1.76
10257--10355
27
3.7
27
89
1
128
24
7
22
46
1.76
10857--10921
23
3.1
23
66
25
70
26
0
16
56
1.40
10830--10921
40
2.3
40
96
0
166
25
1
18
55
1.49
10842--10905
17
3.4
17
69
22
56
23
0
23
53
1.47
10972--11012
21
2.0
20
85
4
55
26
2
4
65
1.25
14810--14891
1
82.0
1
77
0
65
0
7
6
86
0.70
14803--14893
28
3.2
27
76
23
82
1
12
5
81
0.91
14811--14891
33
2.5
32
81
18
98
0
7
6
86
0.71
14812--14893
27
3.0
28
87
8
116
0
9
6
84
0.78
14810--14891
37
2.2
36
83
10
96
0
7
6
86
0.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15509--15633
60
2.0
62
96
3
236
68
9
6
15
1.36

Tables:   1

The End!