Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2355
Parameters: 2 7 7 80 10 50 1000
Length:  35431

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7436--7493
18
2.8
22
75
22
70
46
0
1
51
1.11
8320--8364
18
2.4
19
88
3
65
42
2
0
55
1.12
8349--8408
26
2.3
24
73
15
57
58
3
3
35
1.31
9361--9410
25
2.0
25
84
11
66
38
0
0
62
0.96
10357--10422
17
3.7
18
80
13
75
63
0
0
36
0.95
10606--10671
14
4.4
15
71
11
55
60
3
0
36
1.12
11391--11478
18
4.9
17
75
16
81
46
0
0
53
1.00
12630--12721
15
6.3
15
68
20
54
54
1
1
43
1.14
13041--13142
29
3.3
29
74
16
91
51
0
0
48
1.00
14233--14280
19
2.5
19
77
12
53
47
2
2
47
1.25
14584--14609
3
8.7
3
100
0
52
30
0
0
69
0.89
18648--18687
2
20.0
2
94
0
71
52
0
0
47
1.00
19864--19902
20
1.9
21
94
5
71
61
0
0
38
0.96
20290--20343
2
27.0
2
100
0
108
50
0
0
50
1.00
21089--21173
2
42.5
2
100
0
170
50
0
0
49
1.00
21326--21350
2
12.5
2
100
0
50
52
0
0
48
1.00
21769--21811
17
2.6
16
82
10
50
48
0
0
51
1.00
23886--23910
13
1.9
13
100
0
50
64
0
0
36
0.94
23886--23927
6
7.0
6
78
10
50
59
2
0
38
1.10
27306--27349
23
2.0
23
86
4
63
56
2
0
40
1.11
27374--27414
21
1.9
22
90
5
66
41
0
0
58
0.98
28470--28698
111
2.1
111
84
2
291
30
14
3
51
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30866--30890
13
1.9
13
100
0
50
0
0
96
4
0.24
30865--30891
14
1.9
14
100
0
54
0
0
96
3
0.23
32646--32689
23
1.9
23
90
9
72
40
0
0
59
0.98
32646--32731
30
2.9
30
87
3
120
43
1
0
55
1.07
32759--32814
24
2.3
24
82
11
69
62
1
3
32
1.23
33651--33706
28
2.0
28
82
0
67
62
0
10
26
1.28
34160--34190
2
15.5
2
100
0
62
51
0
48
0
1.00
34675--34712
19
2.0
19
85
10
51
39
0
0
60
0.97
34700--34738
19
2.1
19
85
9
53
43
0
0
56
0.99
34726--34765
15
2.8
14
85
7
53
50
0
0
50
1.00
34882--34930
12
4.2
12
87
10
57
42
14
0
42
1.45
34903--34933
2
15.5
2
93
0
53
48
3
0
48
1.17
35079--35168
38
2.3
37
81
12
101
63
0
5
31
1.17

Tables:   1

The End!