Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2363
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 44893
ACGTcount: A:0.33, C:0.16, G:0.19, T:0.32
Found at i:1996 original size:476 final size:475
Alignment explanation
Indices: 1--19500 Score: 37347
Period size: 476 Copynumber: 41.0 Consensus size: 475
* *
1 TATCAAAAACGGTGGAAAGAACAC-TTTTCTTGCAACA-CAAAGCATCAATGCCAGGTATCCGAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
* * *
64 CGAAAGG-ATAGGCTTGTGCTTCCAAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
128 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
* *
193 AAGAAAACAATCAATATTGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* *
258 GAATTAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
*
323 AATGGTAGCAAGAGAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAGA-AACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
388 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
453 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
474 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
539 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
604 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
669 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
734 GAATTAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
798 AATGGTAGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGT-GGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
863 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
928 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
*
949 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAT
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1014 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
1079 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
1144 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
1209 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
*
1273 AATGGTGGCAAGAAAACCTTTCTTACGAAACCAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
*
1338 CAAAGTTTACGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
1403 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
1424 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
*
1489 CGAAAGGAATATGCTTTTGCTTCCAAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
1554 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
1619 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* *
1684 GAATTAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
*
1749 AATGGTAGCAAGAGAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAGA-AACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
1814 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
1879 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
*
1900 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAT
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1965 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
* *
2030 TGTCATATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACAGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
2095 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
2160 GAATGAAGGTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
* *
2225 ATTGGTGGCAAGAAAGCCTTTCTTACGAAACCAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
2290 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
2355 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
2376 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
2441 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
2506 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
2571 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
2636 GAATGAAGGTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
*
2701 AATGGTAGCAAGAGAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAGA-AACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
2766 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
2831 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
2852 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
2917 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
2982 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
130 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
3047 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
3112 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
3176 AAATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
325 AAATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
3241 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
3306 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
3327 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
3392 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
3457 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
3522 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCTGTTTATAGTGCCTAATCACAAAA
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATG-TGTTTATAGTGCCTAATCACAAAA
3587 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
3652 AAATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
3717 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
3782 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
3804 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
3869 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
3934 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
* * *
3999 AAGAAAACAATTAATATTGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
4064 GAATGAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
4129 AATGGTGGCAAGAGAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAGA-AACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
4194 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
4259 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
4280 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
4345 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
4410 TTGTCAGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGG
130 TTGTC-GTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGG
4475 AAAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAA
194 AAAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAA
4540 ATGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
259 ATGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* *
4605 AAATTGGTGGCAAGAAAGCCTTTCTTACGAAACCAAAGCATTAATATAGTGTATCCTTATGAGAA
324 AAAATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAA
4670 GACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTT
388 GACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTT
4735 ATTTAAGAGACAAACTTTATTTC
453 ATTTAAGAGACAAACTTTATTTC
4758 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
4823 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
*
4888 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACAGA
130 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
* *
4953 AAAGAAAACAATTAATATTGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
*
5018 TGAATGAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
5083 AAATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
5148 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
5213 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
5235 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
5300 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
5365 TGTCAGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
131 TGTC-GTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
5430 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
5495 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
5559 AAATGGTGGCAAGAAAGCCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
5624 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
5689 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
5711 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
5776 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
5841 TGTCAGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
131 TGTC-GTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
* * *
5906 AAAGAAAACAATTAATATTGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
5971 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
6036 AAATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
6101 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
6166 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
6188 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
6253 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
6318 TTGTCAGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGG
130 TTGTC-GTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGG
6383 AAAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAA
194 AAAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAA
*
6448 ATGAATGAAGATCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
259 ATGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* * *
6513 AAATTGGTGGCAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATAGTGTATCCTTATGAGAA
324 AAAATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAA
6578 GACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTT
388 GACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTT
6643 ATTTAAGAGACAAACTTTATTTC
453 ATTTAAGAGACAAACTTTATTTC
*
6666 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAT
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
*
6731 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAAACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
* *
6796 TGTCATATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACAGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
* *
6861 AAGAAAACAATCAATATCGTTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
6926 GAATGAAGGTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
* * *
6991 ATTGGTGGCAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
*
7056 CAAAGTTTACGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
7121 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
*
7142 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAT
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
7207 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
7272 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
7337 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
7402 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
*
7466 AATGGTGGCAAGAAACCTTTCTTACGAAACCAAAGCATTAATATAGTGTATCCTTATGAGAAGAC
326 AATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGAC
7531 AAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTATT
391 AAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTATT
7596 TAAGAGACAAACTTTATTTC
456 TAAGAGACAAACTTTATTTC
7616 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
7681 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
7746 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
7811 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
7876 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
7940 AATGGTGGCAAGAGAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAGA-AACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
8005 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
8070 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
8091 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
8156 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
8221 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
8286 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
8351 GAATGAAGGTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
8415 AATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGAC
326 AATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGAC
8480 AAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTATT
391 AAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTATT
8545 TAAGAGACAAACTTTATTTC
456 TAAGAGACAAACTTTATTTC
8565 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
8630 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
8695 TTGTCAGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACAG
130 TTGTC-GTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAAC-G
8760 GAAAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAA
193 GAAAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAA
8825 AATGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-
258 AATGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA
*
8889 AAAAATGGTGGCAAGAAAGCCTTTCTTACGAAACCAAAGCATTAATATAGTGTATCCTTATGAGA
323 AAAAATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGA
8954 AGACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCT
387 AGACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCT
9019 TATTTAAGAGACAAACTTTATTTC
452 TATTTAAGAGACAAACTTTATTTC
9043 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
9108 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
9173 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
9238 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
9303 GAATGAAGGTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
9368 AATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGAC
326 AATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGAC
9433 AAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTATT
391 AAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTATT
9498 TAAGAGACAAACTTTATTTC
456 TAAGAGACAAACTTTATTTC
9518 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
9583 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
9648 TTGTCAGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGG
130 TTGTC-GTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGG
9713 AAAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAA
194 AAAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAA
9778 ATGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
259 ATGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
*
9843 AAATTGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
324 AAAATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
9908 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
9973 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
9995 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
10060 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
10125 TGTCAGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
131 TGTC-GTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
10190 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
10255 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
*
10319 AAATGGTGGCAAGAAAGCCTTTCTTACGAAACCAAAGCATTAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
10384 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
10449 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
10471 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
10536 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
10601 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
130 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
10666 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
10731 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
10795 AAATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
325 AAATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
10860 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
10925 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
10946 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
11011 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
11076 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
11141 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
11206 GAATGAAGGTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
*
11271 AATGGTAGCAAGAGAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAGA-AACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
11336 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
11401 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
11422 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
11487 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
11552 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
11617 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
11682 GAATGAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
11747 AATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
11812 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
11877 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
11898 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
11963 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
12028 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
12093 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
12158 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
12223 AATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGAC
326 AATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGAC
12288 AAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTATT
391 AAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTATT
12353 TAAGAGACAAACTTTATTTC
456 TAAGAGACAAACTTTATTTC
12373 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
*
12438 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATGAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
**
12503 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACAAA
130 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
*
12568 AAAGAAAACAATTAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
12633 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
*
12698 AATTGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
12763 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
12828 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
12850 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
12915 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
12980 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
13045 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
13110 GAATGAAGGTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
13174 AATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
13239 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
13304 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
13325 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCT-A
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
13389 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
*
13454 TGTCATATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACAGGA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAAC-GGA
13519 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
13584 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
* *
13648 AAATGGTGGCAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
13713 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
13778 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
13800 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
13865 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
13930 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
13995 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
14060 GAATGAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
14125 AATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
14190 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
14255 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
14276 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
14341 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
* *
14406 TTGTCATATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACAGA
130 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
14471 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
14536 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
* *
14600 AAATGGTGGCAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
14665 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
14730 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
14752 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
14817 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
14882 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
14947 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
15012 GAATGAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
15077 AATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
15142 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
15207 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
15228 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
15293 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
15358 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
15423 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
15488 GAATGAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
15553 AATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
15618 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
15683 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
15704 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
15769 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
15834 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
15899 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* *
15964 GAATTAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTAC-AAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
16028 AATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
16093 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
16158 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
16179 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
16244 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
16309 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
16374 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
16439 GAATGAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
16504 AATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
16569 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
16634 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
16655 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
16720 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
16785 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
130 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
16850 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
*
16915 TGAATGAAGGTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC-AA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
*
16979 AAATGGTGGCAAGAAAACCTTTCTTACGAAACAAAAGCATTAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
17044 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
17109 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
17131 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
17196 TCGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
66 -CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGC
* *
17261 TTGTCATATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACAGA
130 TTGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGA
17326 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
195 AAAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAA
17391 TGAATGAAG-TCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
* * *
17455 AATTGGTGGCAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAGAAA-CCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
*
17520 ACAAAGTTTACGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
17585 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
17607 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
17672 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
17737 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
17802 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* *
17867 GAATTAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTAC-AAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
17931 AATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
17996 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
18061 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
18082 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
18147 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
18212 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
*
18277 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
18342 GAATGAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
18407 AATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
18472 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
18537 TTAAGAGACAAACTTTATTTC
455 TTAAGAGACAAACTTTATTTC
18558 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
18623 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
18688 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
18753 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGCTGTTTATAGTGCCTAATCACAAAA
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATG-TGTTTATAGTGCCTAATCACAAAA
*
18818 TGAATGAAGTTCATTACTAGAATCCTCGTTAGTCTCATTTGAGGCACGAACTTAGACTTTAC-AA
260 TGAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAA
18882 AAATGGTGGCAAGAAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
325 AAATGGTGGCAAG-AAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAG
18947 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
389 ACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTA
19012 TTTAAGAGACAAACTTTATTTC
454 TTTAAGAGACAAACTTTATTTC
19034 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
1 TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
19099 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
66 CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
19164 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAAC-GAA
131 TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
19228 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
196 AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
*
19293 GAATGAAGGTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
261 GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
* * *
19358 AATGGTAGCAAGAGAACCTTTCTTACGAAACCAAAGCATCAATATAGTGTATCCTTATGAGAAGA
326 AATGGTGGCAAGA-AACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGA
19423 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTC-TGTTTGTCTTAT
390 CAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTAT
19487 TTAAGAGACAAACT
455 TTAAGAGACAAACT
19501 AAAGTGTGTA
Statistics
Matches: 18798, Mismatches: 171, Indels: 115
0.99 0.01 0.01
Matches are distributed among these distances:
473 24 0.00
474 1354 0.07
475 4861 0.26
476 8367 0.45
477 3054 0.16
478 1138 0.06
ACGTcount: A:0.38, C:0.15, G:0.18, T:0.30
Consensus pattern (475 bp):
TATCAAAAACGGTGGAAAGAACACATTTTCTTGCAACACCAAAGCATCAATGCCATGTATCCTAA
CGAAAGGAATATGCTTTTGCTTCCTAATCTCGAAGAAAATGGAGACTTTTATAAGAATTGATGCT
TGTCGTATTTAAGGGAAGAATTTTGATATTAAGGAAAACAGTGCAAAGAAAAGATTTCAACGGAA
AAGAAAACAATCAATATCGTTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAT
GAATGAAGTTCATTACTAGAATCCTCGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
AATGGTGGCAAGAAACCTTTCTTACGAAACGAAAGCATTAATATAGTGTATCCTTATGAGAAGAC
AAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTGTTTGTCTTATT
TAAGAGACAAACTTTATTTC
Found at i:22661 original size:483 final size:476
Alignment explanation
Indices: 20345--34436 Score: 11971
Period size: 483 Copynumber: 28.6 Consensus size: 476
20335 TCTTCTTACC
* * * *
20345 GCAACAAGCTTATTCCTTTCGATAGGA-ACAAATGGCATTGATGGCTTTGGTTTTGC-AGAAACT
1 GCAA-AAGCATATTCCTTTCGTTAGGATAC--ATGGCATTGAT-GCTTTGGTGTTGCAAGAAAAT
*
20408 GTGTTCTTTCCAACGTTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAGAACAAACAAGAATTG
62 GTGTTCTTTCCACCGTTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAG-ACAAACAAGAATTG
*
20473 TCCATGCT-ATCCCCCTTCTTTTCATGATTAGGCACCATAAAAACTTTTGTCCTTCTTC-TCAAT
126 T-CATGCTAATCCCCATTCTTTTCATGATTAGGCACCAT--AAAC-TTTGT-CTTC-TCAT--A-
* * *
20536 AGGATACACTAATATTATATGCTTTCG-TTCGTCAGAAAGGTTCTCTTGCTAATAAAACCATTTT
182 AGGATACACT-ATATTA-ATGCTTTGGTTTCGTAAGAAAGGTT-TCTTGC------CACCATTTT
* *
20600 TTGT-AAGTCCCTAAGTTTCGTGCCTCCAAATGAGACTAAACGAGGATTCTAGTAAGGAACGTCA
238 TTGTAAAGT--CTAAG-TTCGTGCCT-CAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCA
* * * *
20664 TTCATTTTGTTATTAGGCAATATAACCGCATT-TC-TCATT-GAAT-AACGATATTGATTGTTTT
299 TTCATTTTGTGATTAGGCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTT
* *
20725 CTTTTGTCCGTT-AAATCTTTTCTTGGCAACTTTTTTCCTTAAT-TCAAAATTCTTCCCTTAAAT
364 C-TTT-TCCGTTGAAATCTTTTCTTTGC-ACTGTTTTCCTTAATATCAAAATTCTTCCCTTAAA-
20788 TACGACAAGCATCAATTC-TATAAAAGTCTCCATTTTCTTCGAGATTAGGAA
425 TACGACAAGCATCAATTCTTATAAAAGTCTCCATTTTCTTCGAGATTAGGAA
* **
20839 GCAAAAGCACTATTCC-GTCG-TAGGATACATGGCATTGATGCTTTTGGTGTTGCCCGAAAATGT
1 GCAAAAGCA-TATTCCTTTCGTTAGGATACATGGCATTGATGC-TTTGGTGTTGCAAGAAAATGT
20902 GTTCTTACTTACCACACCCGTTTTTGATAGAAATAAAGGTTTGTTCTCTTAAAT-AGACAAACAA
64 GTTC-T--TT--C-CA-CCGTTTTTGATAGAAATAAA-GTTTG-TCTCTTAAATAAGACAAACAA
20966 GAATTGTCAAT-CTAATCCCCATTCTTTTCATGATTAGGACACCATAAACTTTGTCTTCTCATAA
120 GAATTGTC-ATGCTAATCCCCATTCTTTTCATGATTAGG-CACCATAAACTTTGTCTTCTCATAA
* * * *
21030 -GAGAC-CTATATATTAATTGTCCTTCGTTTTCGGAAG-AAGGTTTTCTTGCC-CCATTTTTGTA
183 GGATACAC--TATATTAA-TG--CTTTGGTTTCGTAAGAAAGG-TTTCTTGCCACCATTTTT-T-
*
21091 AAGTCTAGGAAGTCCTAAAGGTCCGTGCCTC-AATGAGACT--ACGAGGATTCTAGTAATG-ACT
240 --G--TA--AAGT-CT-AA-GTTCGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACT
* * * *
21152 TCATTCATTTTTGTGATTAGGCACTAGAAATGCATTCTCTTCATTAGGATAAACAATATTAATTG
296 TCATTCA-TTTTGTGATTAGGCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTG
* *
21217 TTTTTCCTTGTTCTGTTGAAATCTTTTCTTTGCACTAGTTTTTCCCCTTAATATGCAAAAGTCGT
360 -TTTT-CTT-TTCCGTTGAAATCTTTTCTTTGCACT-G-TTTT--CCTTAATAT-CAAAATTC-T
* * * *
21282 CCCCTTAAATATGACCAAGCATCAATTCGTA-ATAAAGTTTCCATTTTCTTCTTCGAGATTAGGA
416 TCCCTTAAATACGA-CAAGCATCAATTCTTATA-AAAGTCTCCA--TT-TTCTTCGAGATTAGGA
21346 A
476 A
* * * *
21347 GCAAAAAGCTTAGTCCTTTCGATAGGATACATGGCAGTGATGCTTTGGTGTTGC-AGAAAATGTG
1 GC-AAAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTTGGTGTTGCAAGAAAATGTG
*
21411 TTTTTCTTTCCACCGTTTTTTTTGATTAGAAATAAAGTTTGTCTCTTAAATAAGACAAACGAGAA
65 ---TTCTTTCCACCG---TTTTTGA-TAGAAATAAAGTTTGTCTCTTAAATAAGACAAACAAGAA
* *
21476 TTGGTCATGCTCATCCCCATTCTTTTCAGGATTAGGCCACC-T-AACTTTGT-TTCTCATAAGGA
123 TT-GTCATGCTAATCCCCATTCTTTTCATGATTAGG-CACCATAAACTTTGTCTTCTCATAAGGA
* * *
21538 TACAACTATA-TAATGCTTTCGTTTCCGTAAG-AA-GTTCGCTTGCTAAAAACCCCATTTTTTGA
186 TAC-ACTATATTAATGCTTTGGTTT-CGTAAGAAAGGTT-TCTTGC------CACCATTTTTTG-
* * *
21600 TAAAGTCTAAGTTCGTGCCTCACAT--G-CCAAACGAGGATTCTAGTAATGACCCTGTCATTTCA
241 TAAAGTCTAAGTTCGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGA-ACT-TCA-TTCA
* * * * * *
21662 TTTTTGTGATGAGGCACGAGAAACACA-CCTCTTCATTAGGAGAAACG-TATATGATTGTTTTCT
303 -TTTTGTGATTAGGCACTATAAACGCATTCTCTTCATTAGGATAAACGATAT-TGATTGTTTTC-
*
21725 TTTTCCG-TGAAATCGTTTCTTTGCACTGTTTTCCTTAATA-C-AAATTCTTCCCTTAAATAC-A
365 TTTTCCGTTGAAATCTTTTCTTTGCACTGTTTTCCTTAATATCAAAATTCTTCCCTTAAATACGA
* * * *
21786 CAAGCCACATCAAGTCTTAT-AAAGTCTCCATTGTCATCGAGATGAGGAA
430 CAAG---CATCAATTCTTATAAAAGTCTCCATTTTCTTCGAGATTAGGAA
* * *
21835 GCCAAAGCATATTCCTTTCGTTAAGGAAGACATGGCATTGATGCGTTGGGTTGTTGCAAGAAAAT
1 GCAAAAGCATATTCCTTTCGTT-AGG-ATACATGGCATTGATGC-TTTGG-TGTTGCAAGAAAAT
*
21900 GTGTTCCTTTTTTCTTTCCACCATCTTTTCCACCGTGTTTGATAGAAATAAAGTTTTGTCTC-T-
62 GTG-------------T------TC-TTTCCACCGTTTTTGATAGAAATAAAG-TTTGTCTCTTA
* * *
21963 AATAAGACAAACAACAAGAATTGGC-TGCTAATCCCCATTCTTTTCATTATTAGGCACCA-GAAC
106 AATAAGAC--A-AACAAGAATTGTCATGCTAATCCCCATTCTTTTCATGATTAGGCACCATAAAC
* *
22026 TTTGTCTTTCCCCCCCCTCA-AAGGATACACTATTTAATAATATGCTTTCGTTTCGTAAGGAAAG
168 TTTGTC-TT-------CTCATAAGGATACACTA--T-ATTA-ATGCTTTGGTTTCGTAA-GAAAG
* *
22090 GTTCTCTTGCTAACCATTTTTTGTAGAGTCCTAAGTTCGTGCCCTCAAATGAGACT-AACGAGGA
220 GTT-TCTTGC-CACCATTTTTTGTAAAGT-CTAAGTTCGTG-CCTCAAATGAGACTAAACGAGGA
*
22154 TTCTAGTTAATGAACTTAATTCATTTTTGTGATTAGGCACTAT-AACGCATTCT-TTCATTAGGA
281 TTCTAG-TAATGAACTTCATTCA-TTTTGTGATTAGGCACTATAAACGCATTCTCTTCATTAGGA
* * *
22217 TAAAACGATATTGAAGTTGTTTTCTTGTCCG-GGAAATCTTTTGCTTTGCACTGTTTCCCTTAAT
344 T-AAACGATATTG-A-TTGTTTTCTTTTCCGTTGAAATCTTTT-CTTTGCACTGTTTTCCTTAAT
*
22281 AATAAAAATTTCTTCCCTTAAAGTACGAC-AGCATCAAATTCTTA-AAAAGTCTCCATTTTCTTC
405 -ATCAAAA-TTCTTCCCTTAAA-TACGACAAGCATC-AATTCTTATAAAAGTCTCCATTTTCTTC
*
22344 GCGATGT-GGAA
466 GAGAT-TAGGAA
*
22355 GCAAAAGCATATTCCTTGTCGTTAGGAT-CAT-GCATTGATGCTTTGGTGGTGCAAGAAAATGTG
1 GCAAAAGCATATTCCTT-TCGTTAGGATACATGGCATTGATGCTTTGGTGTTGCAAGAAAATGTG
* * * *
22418 TTCGTTCCACCGTTGGTTGATAGAAATAAAGTTTGGCCTCTTAAATAAGAAAAAC-AGAATTGTC
65 TTCTTTCCACCGTT-TTTGATAGAAATAAAGTTT-GTCTCTTAAATAAGACAAACAAGAATTGTC
22482 ATGCTAATCCCCATTCTTTTCACTGATTAGGCA-CAGTAAACTTTGTCTTCTCATAAGGATACAA
128 ATGCTAATCCCCATTCTTTTCA-TGATTAGGCACCA-TAAACTTTGTCTTCTCATAAGGATAC-A
* *
22546 CTATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTTGCCACCAATTTTTGTAAAGTCTAAGTT
190 CTATATTAATGCTTTGGTTTCGTAAGAAAGG-TTTCTTGCCACCATTTTTTGTAAAGTCTAAGTT
*
22611 CGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCAC
254 CGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCATTCATTTTGTGATTAGGCAC
*
22676 TATAAACACATTCTCTTCATTTAGGATAAACGATATTGATTGTTTTCTTTTCCGTTGAAATCTTT
319 TATAAACGCATTCTCTTCA-TTAGGATAAACGATATTGATTGTTTTCTTTTCCGTTGAAATCTTT
22741 TCTTTGCACTAGTTTTCCTTAATATCAAAAATTCTTCCCTTAAATACGACAAGCATCAATTCTTA
383 TCTTTGCACT-GTTTTCCTTAATATC-AAAATTCTTCCCTTAAATACGACAAGCATCAATTCTTA
22806 TAAAAGTCTCCACTTTT-TTCGAGATTAGGAA
446 TAAAAGTCTCCA-TTTTCTTCGAGATTAGGAA
** *
22837 GCAAAAGCATATTCCTTTCAATAGGATACATGACA-TGATGCTTTCGG-GTTGCCAAGAAAATGT
1 GCAAAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTT-GGTGTTG-CAAGAAAATGT
*
22900 GTTCTTTCCACCGTTTTTGATAGAAGTAAAG-TTGTCTCTTAAATAAGACAAACAAGAATTGTCA
64 GTTCTTTCCACCGTTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAGACAAACAAGAATTGTCA
22964 TGCTAATCCCCATT-TCTTTCATGATTAGGCACCATAAAC-TTGTCTTCTCATAAGGATACACTA
129 TGCTAATCCCCATTCT-TTTCATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACTA
* *
23027 TATTGATGCTTTGG-TTCGTAAGAAAGGCTTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTCGT
193 TATTAATGCTTTGGTTTCGTAAGAAAGG-TTTCTTGCCACCATTTTTTGTAAAGTCTAAGTTCGT
* *
23091 GCCTCAAATGAGACAAAACGAGGATTCTAGTAATGACCTTCATTCATTTTGTGATTAGGCACTAT
257 GCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCATTCATTTTGTGATTAGGCACTAT
** * * * *
23156 AAACAAATTCCCCTCATTATGAT-AACGATATTGATTGTTTTC-TTTCTGTTGAAATCTTTTCTT
322 AAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTCTTTTCCGTTGAAATCTTTTCTT
* *
23219 TGCACTGATTTCCTTAATATCAAAAATTCTTCCCTTAAATATGACAAGCATCAATTCTTATAAAA
387 TGCACTGTTTTCCTTAATATC-AAAATTCTTCCCTTAAATACGACAAGCATCAATTCTTATAAAA
*
23284 GTCTCCACTTTCTTCGAGATTAGGAA
451 GTCTCCATTTTCTTCGAGATTAGGAA
*
23310 GCAAAAAGCAT-TTCCTTTCGATTAGGATACATGGAATTGATGCTTTGGTGTTGC-AGAAAATGT
1 GC-AAAAGCATATTCCTTTCG-TTAGGATACATGGCATTGATGCTTTGGTGTTGCAAGAAAATGT
*
23373 GTTCTTTCCACCGTTTTTGATAGAAATAAAGTTTGCCTCTTAAA-ATAGACAAACAAGAATTGTC
64 GTTCTTTCCACCGTTTTTGATAGAAATAAAGTTTGTCTCTTAAATA-AGACAAACAAGAATTGTC
23437 ATGCTAATCCCCATTCTTTTCATTGATTTAGGCACCATAAA-TTTGTCTTCTCAATAAGGATACA
128 ATGCTAATCCCCATTCTTTTCA-TGA-TTAGGCACCATAAACTTTGTCTTCTC-ATAAGGATACA
*
23501 CTATA-TAATGCTTTGGTTTCATAAGAAAGGTTTTCTTGCCTACCAATTTTTTGTAAAGTTCTAA
190 CTATATTAATGCTTTGGTTTCGTAAGAAAGG-TTTCTTGCC-ACC-ATTTTTTGTAAAG-TCTAA
23565 GTTCGATGCCTCAAATGAGAC-AAACGAGGATTCTAGTAATG-ACTTCATTCATTTTGTGATTAG
251 GTTCG-TGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCATTCATTTTGTGATTAG
*
23628 GCACTATAAACACATTCTC-TCATTAGGATAAACGATATTGATTGTTTTCTTTTCCGTATGAAAT
315 GCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTCTTTTCCGT-TGAAAT
23692 C-TTTCTTTGCACTGTTTTCCTTAATATCAAAATTCTTCCC-TAAATACGACAAGCATCAATTCT
379 CTTTTCTTTGCACTGTTTTCCTTAATATCAAAATTCTTCCCTTAAATACGACAAGCATCAATTCT
23755 TATTACAAAGTCTCCACTTTTC-TCGAGATTAGGAA
444 TA-TA-AAAGTCTCCA-TTTTCTTCGAGATTAGGAA
*
23790 GCAAAAAGCATATTCCTTTC-TTAGGATACAT-GCATTGATGCTTTGGGGTGTGCAAGAAAATGT
1 GC-AAAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTTGGTGT-TGCAAGAAAATGT
* * * *
23853 GTTC-TTCCCCCGTTTTTTGATAGGAATAAAGTGTGTCTCTTACATAAGAC-AACAAAGAATTGT
64 GTTCTTTCCACCG-TTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAGACAAAC-AAGAATTGT
* *
23916 CATG-TAACCCCCATTTTCTTCTTTTCATGATTA-GCAACCGTAAACTTTGTC-TCT-AT-AGGA
127 CATGCTAATCCCCA-----TTCTTTTCATGATTAGGC-ACCATAAACTTTGTCTTCTCATAAGG-
* *
23976 TAATACACT-TATTGATGCTTTGGTTTCGTAAGACAGGCTTGTTTTTTTTTTTTTCCTTTTCTTG
185 --ATACACTATATTAATGCTTTGGTTTCGTAAGA-AAG---G----------------TTTCTT-
*
24040 GCCACCATTTTTTTGTAAAGTCT-AGTTTCG-GCCCTCAAATGA-AC-AAACGATGATTCTAGT-
227 GCCACCA-TTTTTTGTAAAGTCTAAG-TTCGTG-CCTCAAATGAGACTAAACGAGGATTCTAGTA
* * *
24100 ATGACCTTCATATTCATTTTGGGTGATTAGGCACTAT-AAC-CAATTTCACCTCAATTAGGAT-A
289 ATGAACTTC--ATTCATTTT--GTGATTAGGCACTATAAACGC-A-TTCTCTTC-ATTAGGATAA
* *
24162 ACGATAATGATTGTTTTCGTTTTCCTTTGAAATCTTTTCTTTCGTGCAACTGTTTTCCTTAATAT
347 ACGATATTGATTGTTTTC-TTTTCCGTTGAAATCTTTTC-TT--TGC-ACTGTTTTCCTTAATAT
* * * * * * *
24227 CAAAAATTTCTCGCCCTCAAATAAGGA-AAGCAAATCAATTATTAGAAAAGTTTTCATTTTTCTT
407 C-AAAA-TTCT-TCCCTTAAAT-ACGACAAGC--ATCAATTCTTATAAAAGTCTCCA---TT-TT
*
24291 CCTTCGAGATT-TGAA
462 -CTTCGAGATTAGGAA
* * * *
24306 GC-AAAGCATATTCCGTTCGATAGGAGTACATGGCAATTGATGCGTTTGGGGTTGCAAGAAAAGG
1 GCAAAAGCATATTCCTTTCGTTAGGA-TACATGGC-ATTGATGC-TTTGGTGTTGCAAGAAAATG
* *
24370 TGTTCTTTCCACCG-TTTTGATAG--A-GAAGTGTGTCTCTTAAATAAGACAAACAAGAATTGTC
63 TGTTCTTTCCACCGTTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAGACAAACAAGAATTGTC
* *
24431 ATGCGAATCCCCATTC-TTTCATGAGTAGGCAACCATAAACTTTGTCTTCTCAT--GGATACACT
128 ATGCTAATCCCCATTCTTTTCATGATTAGGC-ACCATAAACTTTGTCTTCTCATAAGGATACACT
* *
24493 ATATTAATGCTTTCGTTTCGTAAGACCGAGGTTCATCCCTTGCTACCACCCATTTTTTGTAAAGT
192 ATATTAATGCTTTGGTTTCGTAAGA--AAGGTT--T--CTTG---CCA-CCATTTTTTGTAAAGT
* * *
24558 CGAAGTTCGTGCCTCAAATGA-AC-AAACGAGGA-TCTAGTAATGACCTTCATTTTCATTTTTGG
247 CTAAGTTCGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCA--TTCA-TTTTGT
* * * *
24620 GATTAGGCACTAGAAACACAGTCTCTTCATTAGGATAAACGATATTGATTGTTTTCAGTATTGCC
309 GATTAGGCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTC--T-TTTCC
* *
24685 GTTG-AATCGTTTCTGTGGCACTGTTTTCCTT-AT-TCAAAATTCTTCCCTTAAAT-CGAC-AGC
371 GTTGAAATCTTTTCT-TTGCACTGTTTTCCTTAATATCAAAATTCTTCCCTTAAATACGACAAGC
* ** *
24745 -TCAATTCTTATAAACGTCTCCATTTTCTTTGTTTTCCCCCCCTTCGATCTTCGGCAA
435 ATCAATTCTTATAAAAGTCTCCA---------TTTT------CTTCGAGATTAGG-AA
* *
24802 GCAAAAGCATATTCCCTTTCGTTAGGATACATGGCCATT--TGC-TTGGTGTTTCACGAAAATGT
1 GCAAAAGCATATT-CCTTTCGTTAGGATACATGG-CATTGATGCTTTGGTGTTGCAAGAAAATG-
* * *
24864 TGTTTCTTTCCAACAATGTCCCTTCCACCAGTTTTGAGAGAACTAAAGTTTGGTCTCTT-AATAA
63 TG-TTCTTT-C--C-A----CCGT-------TTTTGATAGAAATAAAGTTT-GTCTCTTAAAT-A
* * *
24928 AGACAACAACAAGAACTGTCAGGCTAATTATCCCCATTCTTTTTCATTATTAGGCACCATAAACT
110 AGAC-A-AACAAGAATTGTCATGCT-A--ATCCCCATTC-TTTTCATGATTAGGCACCATAAACT
* *
24993 TGGTCCTTTCTCATAA-GATACACTATATTAATGCGTTTCGTTTCCCGTAAGAAAGGTTCTCTTG
169 TTGT-C-TTCTCATAAGGATACACTATATTAATGC-TTTGGTTT--CGTAAGAAAGGTT-TCTTG
* * *
25057 CTAACCCATTTTTTTTGT-AAGTCTAAGTTCGTGCCTCAAATAAGACT-AACGAGGATTCTAGGA
228 C-CA-CCA--TTTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACTAAACGAGGATTCTAGTA
*
25120 ATGAACTTAATTCATTTTTGTGATTAGGCACTATAAACCGCATTCT-TTGCATTAGGATAAA-GA
289 ATGAACTTCATTCA-TTTTGTGATTAGGCACTATAAA-CGCATTCTCTT-CATTAGGATAAACGA
*
25183 GATTGATTAGTTTTCTTTTCCGTTGAAATCTTTTCCTTTGCACTGTTTTCCTTAATATCAAAATT
351 TATTGATT-GTTTTCTTTTCCGTTGAAATCTTTT-CTTTGCACTGTTTTCCTTAATATCAAAATT
* * * *
25248 C-TCCCGTAAATAACGACAAGCAGCAATTAGCTTATAAAAGTCTCCATTTTCGTCGAGATTTGGG
414 CTTCCCTTAAAT-ACGACAAGCATCAATT--CTTATAAAAGTCTCCATTTTCTTCGAGA-TTAGG
25312 AA
475 AA
25314 GCAAAAGCAATATTCCTTTCGTTAGGATAACATGGCATTGAATGCTTTGGTGGTTGCAAAGAAAA
1 GCAAAAGC-ATATTCCTTTCGTTAGGAT-ACATGGCATTG-ATGCTTTGGT-GTTGC-AAGAAAA
* * * * *
25379 TGTGTTTCTTTCCCACCGTTTTTTAGATCGAACTAACAGTTTTGTCTCTTATACCTACGACACAC
61 TGTG-TTCTTT-CCACCG-TTTTT-GATAGAAATAA-AG-TTTGTCTCTTA-A-ATAAGACAAAC
* * * * *
25444 AAGCATTGTCATGCTAATCCCCATTCTTCTTTTC-TGATTAGGCACCGTAACCTGTGTCCTCTCA
118 AAGAATTGTCATGCTAATCCCCA---TTCTTTTCATGATTAGGCACCATAAACTTTGTCTTCTCA
* *
25508 TAAGGGATACACTATATTTGATGCTTTGGGTTCGTACAGAAAAGGCGTCTTTCCTTGCCACCAAT
180 TAA-GGATACACTATA-TTAATGCTTTGGTTTCGTA-AG-AAA-G-G--TTT-CTTGCCACC-A-
25573 TTTTTTGTGAAAGTCT-AGTTCGTGCCTCAAATGAAGACT-AACGAGGATTCTAGTAATGAACTT
234 TTTTTTGT-AAAGTCTAAGTTCGTGCCTCAAATG-AGACTAAACGAGGATTCTAGTAATGAACTT
* * ** *
25636 CTTTCATTTTGTGATTAGGCACGATAAA-GCATTCTTCTCTGCAGGAGG-TAAACGAGA-TGATT
297 CATTCATTTTGTGATTAGGCACTATAAACGCATTC-TCT-T-CATTAGGATAAACGATATTGATT
*
25698 GTTTTC-TTTCCGGTGAAATCTTTTCTTTGCACTGGTTTT-CTTAATAATCAAAATTCTTCACCT
359 GTTTTCTTTTCCGTTGAAATCTTTTCTTTGCACT-GTTTTCCTTAAT-ATCAAAATTCTTC-CCT
* * *
25761 GAAA-ACGGACAAGCATCAATGCTTATAAAAGTCTCCATTTTCTTTCGAGATTTGG-A
421 TAAATAC-GACAAGCATCAATTCTTATAAAAGTCTCCATTTTC-TTCGAGATTAGGAA
* *
25817 GAAAAAGCATATTTCCTGTTCGTTA-GATACATGGC-TGGAT-CTTTTGGTGTTTGCAAGAAAAT
1 GCAAAAGCATA-TTCCT-TTCGTTAGGATACATGGCATTGATGC-TTTGGTG-TTGCAAGAAAAT
25879 GTGTTCATTTTCCACCGTTTTTGATAGAAATAAAGTTTGTCCTCTT--ATAAGA-ACAACAAGAA
62 GTGTTC--TTTCCACCGTTTTTGATAGAAATAAAGTTTGT-CTCTTAAATAAGACA-AACAAGAA
* *
25941 TTGTCGATTCTAATCCCCATTC-TTTCATGATTAGGCACGCAGTAAAAGC-TTGTCTTCGCATAA
123 TTGTC-ATGCTAATCCCCATTCTTTTCATGATTAGGCAC-CA-T-AAA-CTTTGTCTTCTCATAA
* ** *
26004 -GATACACTATATTGATTGCTTTGGGTTTCCGTAAG-AAGGCTTTTCTTGCCACCAATGTGGTGG
183 GGATACACTATATT-AATGCTTT-GGTTT-CGTAAGAAAGG--TTTCTTGCCACC-AT-TTTTTG
* * *
26067 TAAAGTCCTAAGTTCG-G-CTCAATATTAGACAAAAACGAGGATTCTCATGT-ATGACCTT-ATT
241 TAAAGT-CTAAGTTCGTGCCTCAA-ATGAGAC-TAAACGAGGATTCT-A-GTAATGAACTTCATT
* * * * *
26128 CATTTTGTGATTAGGCACTAGAAACACATTCCCCCTCAATTAGGAT-AACGATATTGAGTGTTTT
301 CATTTTGTGATTAGGCACTATAAACGCATT-CTCTTC-ATTAGGATAAACGATATTGATTG-TTT
* **
26192 GTCTTTTTCTGTTGAAAAATC-TTTC-TTGCACTGCTTGCCCTTAATATTC-AAATTCTT-CCTT
363 -TC-TTTTCCGTTG--AAATCTTTTCTTTGCACTG-TTTTCCTTAATA-TCAAAATTCTTCCCTT
* *
26253 AAATATGACAAGCATCAATTCTTAT--AAGTTTCCATTTTCCTTTCGAGA-TAGGGAA
422 AAATACGACAAGCATCAATTCTTATAAAAGTCTCCATTTT-C-TTCGAGATTA-GGAA
* * *
26308 G-AAAAGCTTAGTCCTTTCGATAGG-TACATGGC-TTGATGCTTTGGGTGTTGCAAGAAAATGTT
1 GCAAAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTT-GGTGTTGCAAGAAAA---T
26370 GTGTTCTTTCCAACCGTTTTTTGATAG--ATAAAGTTTGTCTCTT-AATAAGAC-AACAAGAATT
62 GTGTTCTTTCC-ACCG-TTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAGACAAACAAGAATT
26431 GTCATGCTAATCCCCATTCTTTTCATGATTAGGGCCCACCATAAACTTTGTCTTCTCATAAGGAA
125 GTCATGCTAATCCCCATTCTTTTCATGATTA-GG--CACCATAAACTTTGTCTTCTCATAAGG-A
* * *
26496 TACACTATAGTAATGCTTTCGTTTCGTAAGAAAAGGTTCTCTTTGCTACCATTTTTTTGT-AAGT
186 TACACTATATTAATGCTTTGGTTTCGTAAG-AAAGGTT-TC-TTGCCACCA-TTTTTTGTAAAGT
* * * *
26560 C-AAGTTCGTGCCTC-AGTGAGAC-AAACGAGGATTCTAGTAATG-CCTTCTTTCCCAGTTTGTG
247 CTAAGTTCGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCATT--CATTTTGTG
* *
26621 ATTAGGC-CTAT--ACACATTC-CGTTC-GTAGGATAAACGATATTGATTTGTTTTCTTTT-CGT
310 ATTAGGCACTATAAACGCATTCTC-TTCATTAGGATAAACGATATTGA-TTGTTTTCTTTTCCGT
* *
26680 TGAAATCTTGTCGTTGCACTGTTTTCCTTAATATCAAAATTCTTTACTTCTTCCCTTAAATAACG
373 TGAAATCTTTTCTTTGCACTGTTTTCCTTAATATC-AAA------A-TTCTTCCCTTAAAT-ACG
26745 ACAAGCATCAATTCTTA-AAAAGTCTCCATTTTCTTTTCTGCTAGATTAGGAA
429 ACAAGCATCAATTCTTATAAAAGTCTCCATTTTC--TTC-G--AGATTAGGAA
* * **
26797 GCAAAAGCGAGATTCCTTTCGTT-GTATACATGGC-GGGATGCTTTGGTGTTGCAAGAAAATGTG
1 GCAAAAGC-ATATTCCTTTCGTTAGGATACATGGCATTGATGCTTTGGTGTTGCAAGAAAATGTG
* *
26860 TTTTCTTACCACCGGTTTTTGATAGAAATAAAGTTTGTCTCTTAAATAATACAAAC--GAATTGT
65 --TTCTTTCCACC-GTTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAGACAAACAAGAATTGT
* * *
26923 CATGCTCAAAAAATCCCCCATTCTTTTTCATGATTAGGCACCATAACCTTTGTCTTCGCAGAAGG
127 CATGCT-----AAT-CCCCATTC-TTTTCATGATTAGGCACCATAAACTTTGTCTTCTCATAAGG
* * *
26988 -TCCACCCCGATATTAATGCTTTCGTTTCGTAAG--AGGTTCTCCTTGCACTACCATTTTTTTGT
185 AT--A-CACTATATTAATGCTTTGGTTTCGTAAGAAAGGTT-T-CTTGC-C-ACCA-TTTTTTGT
* *
27050 AAAGTCTAAGTTCGTGCCTCACATGAGACT--ACGAGGATTTCTAGGAAATG-ACTTCATTCATT
242 AAAGTCTAAGTTCGTGCCTCAAATGAGACTAAACGAGGA-TTCTA-GTAATGAACTTCATTCATT
* * * *
27112 TTGTGATTAGGCCAATATAAATGCATTTCTCTTCATTAAGGATAAACAATATTAATTGTGTTTCT
305 TTGTGATTAGG-CACTATAAACGCA-TTCTCTTCATT-AGGATAAACGATATTGATTGT-TTTC-
* *
27177 TTTTCCGTTGAAATCTTTTCTTTGCACTGTTGTCCTGAATAATAATATCAAAA-TCTTCCATTAA
365 TTTTCCGTTGAAATCTTTTCTTTGCACTGTTTTCC----T--TAATATCAAAATTCTTCCCTTAA
* *
27241 ATACGACAAGCAATC-ATTCGTATAAAAGTCTCCATTTTCTTCAGAGATTTGGGAA
424 ATACGACAAGC-ATCAATTCTTATAAAAGTCTCCATTTTCTTC-GAGA-TTAGGAA
* *
27296 GC-AAAGCATATTCCTTTCGTTAGGATAAATGGCATTGATGCTTTGGTGTTGGCACAGAAAAGGT
1 GCAAAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTTGGTGTT-GCA-AGAAAATGT
* * *
27360 GTTTCTATCCAACCGTGTTTGATAAGAAATAAAGTTTTTGGTCTCTTAAAGAAGACAAACAAGAA
64 G-TTCTTTCC-ACCGTTTTTGAT-AGAAATAAAG--TTT-GTCTCTTAAATAAGACAAACAAGAA
*
27425 TTTGTCAACATGCTAATCCCATCCCATTCTTTTCCATGATTAGGCAACCGTAAAACTTTGTC-TC
123 -TTGT---CATGCTAAT--C--CCCATTCTTTT-CATGATTAGGC-ACCAT-AAACTTTGTCTTC
* * *
27489 TTCATAAAGGATACACTATATTAAATGCGTTTCGTTTCGT-AGAAAGGTTCGCTTGCTACCATTT
177 -TCAT-AAGGATACACTATATT-AATGC-TTTGGTTTCGTAAGAAAGGTT-TCTTGCCACCA-TT
* * * *
27553 TTTTGTAAAGTCTAAGTTTCGTGCCGCAAATGAGACT-AACGAGGAGTCTAGTAATGAACGTAAT
236 TTTTGTAAAGTCTAAG-TTCGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCAT
* * * * *
27617 TCATTTTGTGATTAGGCACTAGAAACGCATTCTCTTCATTAGAAGAAA-GAGATTGAGTGTTTTC
300 TCATTTTGTGATTAGGCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTC
27681 TTTTTCCGTTGAAATCTTTCTTTTTTCTTTTGCACTGTTTTTCCTTTCCTTAATATCAAAAATTC
365 -TTTTCCGTTGAAA----TC--TTTTC-TTTGCACTG----T--TTTCCTTAATATC-AAAA---
* *
27746 TTCTTTCCCTGTAAAATACGACAAGCATC-ATTCTCATAAAAGTCTCCATTTTCCACATATCGCG
412 TTC-TTCCCT-T-AAATACGACAAGCATCAATTCTTATAAAAGTCTCCATTTT---C-T-TCGAG
*
27810 ATTTGGAA
469 ATTAGGAA
*
27818 GC-AAAGCA-ATTTCCTTTCGGTA-GATACATGGCATTGATGCTTTGGTGTGGTTGCAAG-AAAT
1 GCAAAAGCATA-TTCCTTTCGTTAGGATACATGGCATTGATGCTTT-G-GT-GTTGCAAGAAAAT
*
27879 GTGTTCTTTTCCCACCGTTTTTGATA-AAAT-AAGTTTTGGTCTCTTAAATAAGACAAACAAATA
62 GTGTTC-TTT-CCACCGTTTTTGATAGAAATAAAG-TTT-GTCTCTTAAATAAGACAAAC-AAGA
* * * *
27942 ATTGTCATGCTAATCCCCATGCTTTTTCATTATTATGCACCTGTAAACTTTGTC-TCTCATAA-G
122 ATTGTCATGCTAATCCCCATTC-TTTTCATGATTAGGCACC-ATAAACTTTGTCTTCTCATAAGG
* ** * * *
28005 AGACACTATATTTTTTTTTTGATTCTTGTTTTCGT-AGAAAGGTTCTTGTTGCTTGCCACCAATT
185 ATACACTATA-----TTAATG-CT-TTGGTTTCGTAAGAAAGG----T-TT-CTTGCCACCATTT
* * * *
28069 TTTGGAAAGTCTAAGTTTTTCGTGCCCTCAAATGAGA--ACACTAGGATATCTAAAAGTAATGAC
237 TTTGTAAAGTCTAAG---TTCGTG-CCTCAAATGAGACTAAACGAGGAT-TCT---AGTAATGAA
* * *
28132 CTTCATTCATTTTGGTTGATTAGGCA-TATAACAAC-C-TTCCCCTCAGTAGGATAAACGAATAT
294 CTTCATTCATTTT-G-TGATTAGGCACTAT-A-AACGCATTCTCTTCATTAGGATAAACG-ATAT
* *
28194 TGATTGTTTGCTTTTCTTTTTCTGTTGAAATCTTGTCTTTGCACATGTTTTTCCTTAATATCAAA
354 TGA----TTG-TTTTC-TTTTCCGTTGAAATCTTTTCTTTGCAC-TG-TTTTCCTTAATATCAAA
* *
28259 ATTCTT-CCTTAAATATGACAAGC-TCAATTCTTAT-AAAGTTTCCATTTTTCTCTTCGA-ATTA
411 ATTCTTCCCTTAAATACGACAAGCATCAATTCTTATAAAAGTCTCCA--TTT-TCTTCGAGATTA
*
28320 TGAA
473 GGAA
* * *
28324 GCAAAAGCATATTCCCTTTCGATAGGATACCAT-GCATTGACGCTTTGGTGGTGCAAGAAAATGT
1 GCAAAAGCATATT-CCTTTCGTTAGGATA-CATGGCATTGATGCTTTGGTGTTGCAAGAAAATGT
*
28388 GTTTATTTCCACCGTTTTTGAATAGAAATAAAGTTTTGTCTC-TAAATAAGACAAACAAG-ATTG
64 G-TTCTTTCCACCGTTTTTG-ATAGAAATAAAG-TTTGTCTCTTAAATAAGACAAACAAGAATTG
*
28451 TCATGCTAATCCCC-TTCTTTTCATGA-TAGGCACCATAAACTTTGTCGTCTC-TAAGG-T-CAC
126 TCATGCTAATCCCCATTCTTTTCATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACAC
* * *
28511 TAGATTAATGC-TTCGTTTCGTAAGAAAGGTTTTCTTGGCCACCA-TTTTTGTAAAGTCTAAGTC
191 TATATTAATGCTTTGGTTTCGTAAGAAAGG-TTTCTT-GCCACCATTTTTTGTAAAGTCTAAGTT
* * **
28574 CGTGCCTCAAAATGGAGACT-AACGAGGAATCTAGTAATGAACTTCAGTCAGATTGTGATTAAGG
254 CGTGCCTC-AAAT-GAGACTAAACGAGGATTCTAGTAATGAACTTCATTCATTTTGTGATT-AGG
* * * * *
28638 CACTATAAATGCATTCTCTTCATTAGGAATAACCAATATTTAAT-TTTTCTTCTTCCGTTGAAAT
316 CACTATAAACGCATTCTCTTCATTAGG-ATAAACGATATTGATTGTTTTCTT-TTCCGTTGAAAT
* *
28702 CTTTTCTTTGCACGGTTTTTCCTT-ATATCAAAATTCTTTCCCTTAAATACGACAAGCATCACAA
379 CTTTTCTTTGCACTG-TTTTCCTTAATATCAAAATTC-TTCCCTTAAATACGACAAGCATCA-AT
* * *
28766 TCTCATAAAAGTCGCCATTTTTCTGCGAGATTAGG-A
441 TCTTATAAAAGTCTCCA-TTTTCTTCGAGATTAGGAA
*
28802 GCAAAAAGCATATTCCTTTCGTTAGGATACATGGAATTGATGCTTTGGTGTTG-AAGAAAATG-G
1 GC-AAAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTTGGTGTTGCAAGAAAATGTG
*
28865 TTGTCTTTTCCACAACCGTTTTT-TTATG-AATAAAAGTTTGTCTCTTAAATAAGACAAACAAGA
65 -T-TC-TTT-C-C-ACCGTTTTTGATA-GAAAT-AAAGTTTGTCTCTTAAATAAGACAAACAAGA
28928 ATTGTCATAGTCTAATCCCCATTCTTTTCATGA-TAGGCACCATAAACTTTGTCTTCTCAT-AGG
122 ATTGTCAT-G-CTAATCCCCATTCTTTTCATGATTAGGCACCATAAACTTTGTCTTCTCATAAGG
* *
28991 ATTACACTATATTAAATGCTTTCGTTTTCGTAAGAATGGTTTTTCTTGGCCACCATTTTTTTGTA
185 A-TACACTATATT-AATGCTTT-GGTTTCGTAAGAAAGG--TTTCTT-GCCACCA-TTTTTTGTA
* *
29056 AAGTCTAAGTTCGTGCCTCAAATGA-AGC-AAACGAGGA-TCTAGTCATGACCTTCATTC--TTT
243 AAGTCTAAGTTCGTGCCTCAAATGAGA-CTAAACGAGGATTCTAGTAATGAACTTCATTCATTTT
* * *
29116 GTGA-TAGGCACTAT-AACACAGTTC-CCTCATTATAGG-GAAAC-ATATTGATTGTTTTC-TTT
307 GTGATTAGGCACTATAAACGCA-TTCTCTTCA-T-TAGGATAAACGATATTGATTGTTTTCTTTT
* * * *
29175 CTGTTGAAATCTTTTTCTTTGC-CTGTGTTCCTTAATATCAAAAGTCTTTCCCTTAAATAGGACA
369 CCGTTGAAATC-TTTTCTTTGCACTGTTTTCCTTAATATCAAAATTC-TTCCCTTAAATACGACA
* *
29239 AGCATCAATTCTTATAACAGTGTCCAGTTTCTCGCTCTTCGAGATTAGGAA
432 AGCATCAATTCTTATAAAAGTCTCCA--TT-T---TCTTCGAGATTAGGAA
* * * * **
29290 GC--AAGCTTAGTCCTTTCGAT-GGAATACATGGCATTGATTC-GGGGTGTTTGCCAAGAAAATG
1 GCAAAAGCATATTCCTTTCGTTAGG-ATACATGGCATTGATGCTTTGGTG-TTG-CAAGAAAATG
*
29351 TGTTCTTTCCACCGTTTTTTGATAGAAAGAAAGTTTTGTCTCTGTAAATAAGACAAACAA-AATT
63 TGTTCTTTCCACCG-TTTTTGATAGAAATAAAG-TTTGTCTCT-TAAATAAGACAAACAAGAATT
* * * * *
29415 -TCATGCTCAGTAAATCATCCCATTCGTTTCCTGATTCGGCCCCCATACAC-TTGTCTTCTCAT-
125 GTCATG--C--T-AATC--CCCATTCTTTTCATGATTAGG-CACCATAAACTTTGTCTTCTCATA
** * ** *
29477 AGGATACACCTAGCTT-CTGCCTTTTCTTTATCGTAAGAAACGGTTCTCTATCTCCTTGCTACCA
182 AGGATACA-CTATATTAATG-C-TTTGGTT-TCGTAAGAAA-GG-----T-T-T-CTTGCCACCA
*
29541 TTTTTTGTAAAGTCTAAGTTACGTGCCTCAAATGAGAC-CAACGAGGATTCCCTAGTAATGGAAC
234 TTTTTTGTAAAGTCTAAGTT-CGTGCCTCAAATGAGACTAAACGAGGATT--CTAGTAAT-GAAC
* * * *
29605 TTAATTCATTTTTGTGATTAGGCACTATAAACGCCTTCGCTTCATTA-GA-AGACGATATTGATT
295 TTCATTCA-TTTTGTGATTAGGCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATT
* *
29668 GTTTTCTTCTCTTTTCCGGTGAAATCTTTTTTCTTTGC-CTGTTTTCC-TACTAT---AATTCTT
359 G---T-TT-TCTTTTCCGTTGAAATC--TTTTCTTTGCACTGTTTTCCTTAATATCAAAATTCTT
*
29728 CCCTTAAAT-CGACAAGCATCAATTC-TATAAAAAGTACTCCATTTTTCTTCGAGAGTA-GAA
417 CCCTTAAATACGACAAGCATCAATTCTTAT-AAAAGT-CTCCA-TTTTCTTCGAGATTAGGAA
*
29788 GCACAAAGCATATATTCC-TTCGTTAGTAATACATGGGCATTGATGCTTTGGTGTTGCAAGAAAA
1 GCA-AAAGC--ATATTCCTTTCGTTAG-GATACAT-GGCATTGATGCTTTGGTGTTGCAAGAAAA
* *
29852 TGTG-TCTTAACCACCGTTTTTTGATAGAATAAGAAAGTGTTGGTC-CTT-AATAAGACAAACAA
61 TGTGTTCTT-TCCACCG-TTTTTGATAG-A-AATAAAGT-TT-GTCTCTTAAATAAGACAAACAA
* *
29914 GAAGTGTCATGCTAATCCCCCATTCTTTTTCATGAGTAGGGCACCATAAAC--TGTCTTCTCATA
120 GAATTGTCATGCTAAT-CCCCATTC-TTTTCATGATTA-GGCACCATAAACTTTGTCTTCTCATA
* *
29977 AGGA-AGACCTATATTAATGCTTTCGGGTTCGTAAGAAAGGTTTTCTTG-CACCATTATTTTGT-
182 AGGATACA-CTATATTAATGCTTT-GGTTTCGTAAGAAAGG-TTTCTTGCCACCATT-TTTTGTA
* * * * *
30039 AAGTCTAAGAGTCCGTGCCGCAAATGAGACTAAA-GATGATGCGAGTAA-GAAACTTGTTCATAT
243 AAGTCT-A-AGTTCGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATG-AAC---TTCAT-T
* * *
30102 C-TTTTGTGA-TAGGCCACGATAAATG-ATTCTCTTCATGTAGGATAAAC-A-A-TGAATTGGTT
301 CATTTTGTGATTAGG-CACTATAAACGCATTCTCTTCAT-TAGGATAAACGATATTG-ATTGTTT
* * * * *
30161 TCTTTTCTGTTGAAATCTGTTCTTTGCACGGTTGTCCCCTTAATAGCAAAATTCTTCCCTT-AAT
363 TCTTTTCCGTTGAAATCTTTTCTTTGCACTGTT-T-TCCTTAATATCAAAATTCTTCCCTTAAAT
* * **
30225 AGGAC-AGCATCAAGTCTTAT--AAGTGGCCATTTTTCTTCGAGATT-GG-A
426 ACGACAAGCATCAATTCTTATAAAAGTCTCCA-TTTTCTTCGAGATTAGGAA
* * * *
30272 GCAAAAGCTTTATTCCCTTTCGATA-GATA-AGGGCAATTGATGCTTTGGTGTTGCAAAGACAAT
1 GCAAAAGC-ATATT-CCTTTCGTTAGGATACATGGC-ATTGATGCTTTGGTGTTGC-AAGAAAAT
* *
30335 GGTGTTTCTTTCCAACG-TTTTGATAGAAATAACATAAGTTTGGTCTCTTAAAGAAG-CAAAC-A
62 -GTG-TTCTTTCCACCGTTTTTGATAGAAAT---A-AAGTTT-GTCTCTTAAATAAGACAAACAA
*
30397 GAATTGTCATGCTAATCCCCCATTCTTTTTCATGATTAGGCA-CAGTAAACTTTGGCTTCTCATA
120 GAATTGTCATGCTAAT-CCCCATTC-TTTTCATGATTAGGCACCA-TAAACTTTGTCTTCTCATA
* *
30461 AGGAATACACTATGATTGATGCTTTGGTTTCCGT-A-AAAGGCTTTC-TGCCACCAAGTTTTTGT
182 AGG-ATACACTAT-ATTAATGCTTTGGTTT-CGTAAGAAAGG-TTTCTTGCCACC-ATTTTTTGT
* *
30523 -AAGTCCTAAGTTCGT-CCTCAAATGAGAAC-AAACGAGGATT-TA-TAGTGGACCTTCATTCAT
242 AAAGT-CTAAGTTCGTGCCTCAAATGAG-ACTAAACGAGGATTCTAGTAAT-GAACTTCATTCAT
* * * *
30583 TTTGTGATTAGGCACTATAAACACATTCGCCCTCATTAAGTATAAACGATATTGATTGTTTTCTT
304 TTTGTGATTAGGCACTATAAACGCATTC-TCTTCATT-AGGATAAACGATATTGATTGTTTTCTT
* *
30648 TT-CTTGTGAAAATCTTTTCTTTGCACTG-TTTCCTTAATATCAAAATTCTTCCC-T-AATATGA
367 TTCCGT-TG-AAATCTTTTCTTTGCACTGTTTTCCTTAATATCAAAATTCTTCCCTTAAATACGA
* *
30709 CAAGCATCAATTCTTATAAAAGTTTTCCA-TGTCTTTCGAG-TTAGGAA
430 CAAGCATCAATTCTTATAAAAG-TCTCCATTTTC-TTCGAGATTAGGAA
* * *
30756 GC-AAAGC-TATTCCTTGTCGATA-GAGACATGGCATTGGACGCTTTGGTGTTGCAAGAAAATGT
1 GCAAAAGCATATTCCTT-TCGTTAGGATACATGGCATT-GATGCTTTGGTGTTGCAAGAAAATGT
30818 GTTCTTTTTCCACCGTTTTTTGATAGAAATAAAGTTTGTCTCTTAAAT-AGACAAACAAGAATTT
64 GTTC--TTTCCACCG-TTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAGACAAACAAGAA-TT
* *
30882 GTCCATGCTAATCCCCATTCGTTTCATGATTAGGCACCATAAACTTTGTTCTTCTCATAGGGATA
125 GT-CATGCTAATCCCCATTCTTTTCATGATTAGGCACCATAAACTTTG-TCTTCTCATAAGGATA
* *
30947 CACTAGAATTAATGCTTTCGTTTCGTAAGAAAAGGTTGTCTTGCCACCATTTTTTGTAAAGTCTA
188 CACTA-TATTAATGCTTTGGTTTCGTAAG-AAAGGTT-TCTTGCCACCATTTTTTGTAAAGTCTA
* ** *
31012 AGTCCGTGCCTCAAATG-GACCGAACGAGGATTCTAATAATGAACTTCATTCATTTTGTGATTAG
250 AGTTCGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCATTCATTTTGTGATTAG
* * * *
31076 GCACTATAAATGCATTCTCTTCATTAGGATAAACAATATTAATTGTTTTTTCTTTCCGTTGAAAT
315 GCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTCT-TTTCCGTTGAAAT
*
31141 CTTTTTCTTTGCACTGTTTTCCTTAATATAAAAATTCCTT-CCTTAAATACGACAAGCATCAATT
379 C-TTTTCTTTGCACTGTTTTCCTTAATATCAAAATT-CTTCCCTTAAATACGACAAGCATCAATT
* * *
31205 CTCAGAAAAGTCGCCATTTTCTTCGAGATTAGGAA
442 CTTATAAAAGTCTCCATTTTCTTCGAGATTAGGAA
*
31240 GCAAAAGCATATTCCTTTCGTTAGGATA-ATGTCATTGATGC-TTGGTGTTGCAAG-AAATGTGT
1 GCAAAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTTGGTGTTGCAAGAAAATGTG-
*
31302 TTCTGTCCACCG-TTTTGATAG-AAT-AAGTTTGTCCTCTTAAATAAGACAAACAAGAATTGTTC
65 TTCTTTCCACCGTTTTTGATAGAAATAAAGTTTGT-CTCTTAAATAAGACAAACAAGAATTG-TC
*
31364 AATGCGAATCCCCATTCTTTTTCATGATTAGGCA-CATAAACTTTTGTCTTCTCATAA-GATACA
128 -ATGCTAATCCCCATTC-TTTTCATGATTAGGCACCATAAAC-TTTGTCTTCTCATAAGGATACA
* * * * *
31427 CTAGATTAAATGCTTTCGTTTCGGAAGAATGGTTTTATATGCCACCATTTTTTTGTAAAGTCTAA
190 CTATATT-AATGCTTTGGTTTCGTAAGAAAGG-TTTCT-TGCCACCA-TTTTTTGTAAAGTCTAA
* *
31492 GTTCGTGGCCTCAAATGAGA--AAA-GA-GATGCTAGTAATGACCTTCATTTCATTTTGTGATTA
251 GTTCGT-GCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCA-TTCATTTTGTGATTA
* * ** * * *
31553 GGCACTATAAACACAATTCCCCGCA-T-GG-TAAAC-ATTTTGGATGGTATTTCTTTTCTGTTTG
314 GGCACTATAAACGC-ATTCTCTTCATTAGGATAAACGATATT-GATTGT-TTTCTTTTCCG-TTG
* * *
31614 -AATCTTTTTCTTTGCAACTGGTTTCCTTAAATATCAAAATTTCTTCCATTAAATATGAACAA-C
375 AAATC-TTTTCTTTGC-ACTGTTTTCCTT-AATATCAAAA-TTCTTCCCTTAAATACG-ACAAGC
* *
31677 ATCAATTCTTAATAAAAGTTTTCCATTTTCTTCGATATTA-G-A
435 ATCAATTCTT-ATAAAAG-TCTCCATTTTCTTCGAGATTAGGAA
* *
31719 -C-AAAGCTTATTCCTTTCGATAGGATACATGGACATTGA-GCTGTTGGTGTTGCAAGAAAATGT
1 GCAAAAGCATATTCCTTTCGTTAGGATACATGG-CATTGATGCT-TTGGTGTTGCAAGAAAATGT
* * * *
31781 GTTCTTTTCCACCGTTTTTGATAGAAATAAAAGTTTGTCTCTTAAATAATGACCACCACGACTTG
64 GTTC-TTTCCACCGTTTTTGATAGAAAT-AAAGTTTGTCTCTTAAATAA-GACAAACAAGAATTG
** * *
31846 TCATGCGCATCCCCCTGCTTTTCATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACAC
126 TCATGCTAATCCCCATTCTTTTCATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACAC
* * *
31911 TATATTAATGC-TTCGTTTCGTAAGAAAGGTTCTCGTGCTACCATTTTTTGTAAAGTCTAAGTTC
191 TATATTAATGCTTTGGTTTCGTAAGAAAGGTT-TCTTGCCACCATTTTTTGTAAAGTCTAAGTT-
* *
31975 CGTGCATCAAATGAGAGCT--ACGAGGATTCT-GTAATGAAC-TAATTCA-TTTGTGATTAGGCA
254 CGTGCCTCAAATGAGA-CTAAACGAGGATTCTAGTAATGAACTTCATTCATTTTGTGATTAGGCA
* * *
32035 CT-TAAACGCATTATCTTCATTAGAATAAACGATA-TGATTGTTTT-TCTTTCCGTTGAAATCGT
318 CTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTCT-TTTCCGTTGAAATCTT
*
32097 TT-TGTGCACT-TTTTCCTTAATATCAAAATTCTTCCC-TAAATAACGACAA-C-TCAATTCTTA
382 TTCTTTGCACTGTTTTCCTTAATATCAAAATTCTTCCCTTAAAT-ACGACAAGCATCAATTCTTA
*
32157 TAAAAGTCCCCTCCAATTTTC-TCGAGATGA-GAA
446 TAAAAGT---CTCC-ATTTTCTTCGAGATTAGGAA
*
32190 GCAAAAGCATATGCC-TTCGTTAGGATACATGGGCATTGGATGCTTTGGTGTTTGCAAGAAAATG
1 GCAAAAGCATATTCCTTTCGTTAGGATACAT-GGCATT-GATGCTTTGGTG-TTGCAAGAAAATG
* *
32254 TGTTC--TACACCGTTTTATGATAG-AATAAAGTGTGTC-CTTAAATAAGACAAACAAGAATTGT
63 TGTTCTTTCCACCGTTTT-TGATAGAAATAAAGTTTGTCTCTTAAATAAGACAAACAAGAATTGT
* * *
32315 CATGCTAATTCCCCATTCGTTTCAGGAGTAGGC-CCATAAACTTTGTC-TCTCATAAGGATACAC
127 CATGCTAA-TCCCCATTCTTTTCATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACAC
* * *
32378 TATATTAAATGCTTTCGTTTTTCGTAAGAAAGTTTTTCTTGCAACCATTTTTTTGT--AGTCTAA
191 TATATT-AATGCTTT-G-GTTTCGTAAGAAAG-GTTTCTTGCCACCA-TTTTTTGTAAAGTCTAA
* *
32441 GTCCCGTGCCTC-AATGAGACT-AACGAGGATTCTAGT-ATG-ACTTCATTCATTTGGTGATTTA
251 GT-TCGTGCCTCAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCATTCATTTTGTGA-TTA
* * * *
32502 GGCACTATAAATGCATTCTCTTCATTAGGATAAACAATATTAATT-TTTTCTTTTTCTGTTG-AA
314 GGCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTC-TTTTCCGTTGAAA
** * * * *
32565 TCTTTTCTTTGCACTGTTTTCCTTAATATCAAAAGGCGTCCCGTAAATATGACAA-CAGCAATGT
378 TCTTTTCTTTGCACTGTTTTCCTTAATATCAAAATTCTTCCCTTAAATACGACAAGCATCAAT-T
* ** * *
32629 CTGATAAAAAGT-TGCCA-TGGCTGCGAGATGAGGAA
442 CTTAT-AAAAGTCT-CCATTTTCTTCGAGATTAGGAA
* * * *
32664 GCAAAAGGATTTAGTCCCTTGCGATAGGAATACAATGGCATTGAATGCTTTGGTGTTGCAAGAAA
1 GCAAAAGCA--TA-TTCCTTTCGTTAGG-ATAC-ATGGCATTG-ATGCTTTGGTGTTGCAAGAAA
* * * *
32729 ATGTGGTCGTTCCCGACCGTTTTGTTGATA-AGAATAAAGGTTGTCCTCTTAAAT-AGACAAACG
60 ATGTGTTC-TTTCC-ACCG-TTT-TTGATAGA-AATAAAGTTTGT-CTCTTAAATAAGACAAACA
* * * *
32792 AGAATTTGTCCATGCTAATCCCAATTCTGTTCATGATTA-GCACCA-AAAC-GTGTCTTCTCAGA
119 AGAA-TTGT-CATGCTAATCCCCATTCTTTTCATGATTAGGCACCATAAACTTTGTCTTCTCATA
* * * *
32854 AGGA-ACAACGATATTAAGGCTTTCGTTTCGTAAGAAAGG-TTCTCTGCTACCATTTTTTGT-AA
182 AGGATAC-ACTATATTAATGCTTTGGTTTCGTAAGAAAGGTTTCT-TGCCACCATTTTTTGTAAA
* * *
32916 GTCGAAG-TCGTGCCTCAAAATGA-AC-AAACGAGGATTCTAGTAATGACCCGTCATTCATTTTG
245 GTCTAAGTTCGTGCCTC-AAATGAGACTAAACGAGGATTCTAGTAATGA-ACTTCATTCATTTTG
* * *
32978 GGATTAGGAACTATAAACACA-TCTCTTCATTAGGATAAAC-ATATTGATTGTTTTCTTTTCCGT
308 TGATTAGGCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTCTTTTCCGT
33041 TG-AATC-TTTCTTTGCACTGTTTTCCTTAATA-CAAAATTCTTCCCTT--ATACGACAAGCATC
373 TGAAATCTTTTCTTTGCACTGTTTTCCTTAATATCAAAATTCTTCCCTTAAATACGACAAGCATC
* * * *
33101 AATTCACTGGTAGTGAGAGGCTCCATTTTCATCGAGAATTAGGAA
438 AATT--CT--TA-TAAAAGTCTCCATTTTCTTCGAG-ATTAGGAA
33146 GC-AAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTTGGGTGTTGCAAGAAAATGTG
1 GCAAAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTT-GGTGTTGCAAGAAAATGTG
* * *
33210 TTCTTCCCACCGTTTTTGATAGAAATAAAGTTTGTCTCGTAAAT-AGAACCAACAAGAATTGTCC
65 TTCTTTCCACCGTTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAG-ACAAACAAGAATTGT-C
*
33274 ATG-TAAATCCCCATTCTTTTCATTATTAGGCACCATAAACTTTGTCCTTCTCATAAGGATACAC
128 ATGCT-AATCCCCATTCTTTTCATGATTAGGCACCATAAACTTTGT-CTTCTCATAAGGATACAC
* *
33338 TATATTAATGCTTTCGG-TT-GTAAAAAAGGTTCTCAAGGTTGCTACCATTTTTGTGTAAAGTCT
191 TATATTAATGCTTT-GGTTTCGTAAGAAAGGTT-TC----TTGCCACCATTTTT-TGTAAAGTCT
* * *
33401 AAGTGTTCGTGCCTCAAATGAGACT-AACG-GGAAGTCTAGTAATGGAACTTAATTCATGTTGTG
249 AA--GTTCGTGCCTCAAATGAGACTAAACGAGG-ATTCTAGTAAT-GAACTTCATTCATTTTGTG
* * *
33464 ATTAGGCACGATAAACGCA-TCTGTTCATTAGGATAAACGATATTGATTGTTGTCTTTTCCGTTG
310 ATTAGGCACTATAAACGCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTCTTTTCCGTTG
* *
33528 AAATC-TTTCTTTGCA-TGTTTTCCCTTAATATCAAAAGTCTTCCCTTAAATACGACAAGCCTCA
375 AAATCTTTTCTTTGCACTGTTTT-CCTTAATATCAAAATTCTTCCCTTAAATACGACAAGCATCA
*
33591 ATTCTTAT-AAAGTCTCCATGTTTCTTCGAGATTTGGAA
439 ATTCTTATAAAAGTCTCCAT-TTTCTTCGAGATTAGGAA
*
33629 -CAAAAGCATATTCCTTTCGGTAGGATACATGGCATTTGATGCTTTGGTGTTGCAAGAAAAAT-T
1 GCAAAAGCATATTCCTTTCGTTAGGATACATGGCA-TTGATGCTTTGGTGTTGCAAG-AAAATGT
*
33692 GTTCTTT-CA-CTTTTTTGATAGAAATAAAGTTTGTCTC-TAAATAAG-CAAACAAGAATTGTCA
64 GTTCTTTCCACCGTTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAGACAAACAAGAATTGTCA
* ** *
33753 TGCGAATCCCCATTCTTTTCATGAGAAGGCACCGT-AACTTTGTGCTTCTCAATAAGGAGGTACA
129 TGCTAATCCCCATTCTTTTCATGATTAGGCACCATAAACTTTGT-CTTCTC-ATAAGGA--TACA
* *
33817 CGATATTTGATGGCTTTGGGGTTTTTCGTAAGAAAAGGCTTATTCCTATGCCACCAAATTTGTTT
190 CTATA-TTAAT-GCTTT--GG--TTTCGTAAG-AAAGG--T-TT-CT-TGCCACC--ATTT-TTT
* *
33882 GTAAAGGTGCTAAGAATTCGGTGCCTCAAAATGAAAAT-AACGAGGATTCGTAAGTAAATGAACT
240 GTAAA-GT-CTAAG--TTC-GTGCCTC-AAATGAGACTAAACGAGGATTC-T-AGT-AATGAACT
* ** *
33946 TCTTTTCATTTTG-GATTAGGCACTAGCAACGC-TTCTCTTCATTAGGATAAACGAGAATTGATG
296 TC-ATTCATTTTGTGATTAGGCACTATAAACGCATTCTCTTCATTAGGATAAACGA-TATTGAT-
*
34009 TGTGTTTC-TTTCC-TTGAAGATCATTGGGGGTTTCTTGTGCAC-GGTTTCCTTAAATATCAAAG
358 TGT-TTTCTTTTCCGTTGAA-ATC--T-----TTTCTT-TGCACTGTTTTCCTT-AATATCAAA-
*
34071 GA-TCTGTCCGCTTAAATACGACAAGCAATCAATTCTTATAAAAGTCGCCATTTGTCTTTACGAG
411 -ATTCT-TCC-CTTAAATACGACAAGC-ATCAATTCTTATAAAAGTCTCCATTT-TC-TT-CGAG
*
34135 AATTGGGGAA
469 -ATT-AGGAA
34145 -CAAAAGCCATATTCGCGTAATTAC-TTAGAGATACAT-GCATTGATGCTTTGGTGTTGCAAGAA
1 GCAAAAG-CATATTC-C-T--TT-CGTTAG-GATACATGGCATTGATGCTTTGGTGTTGCAAGAA
* * *
34207 AATGGTGTTCGTTCCACCGGTTTTTTGATAGAAATAAAGTTTGTCCTGGGGGTGGTAAATAGGAC
59 AAT-GTGTTCTTTCCACC-G-TTTTTGATAGAAATAAAGTTTGT-CT----CT--TAAATAAGAC
* * *
34272 GAAACAAGAATTGTGATGCTAAAGATCCCCATTCTTTTCATTATTTAGAAAGCACCTTAAACTTT
114 -AAACAAGAATTGTCATGCT--A-ATCCCCATTCTTTTCATGA-TTAG---GCACCATAAACTTT
* *
34337 GTCTTCTCAGT-A-GAGACACTATATTGATGCTTAATGGTTTCGTAAG-AAGGCTTTCTTGCCAC
171 GTCTTCTCA-TAAGGATACACTATATTAATGCTT--TGGTTTCGTAAGAAAGG-TTTCTTGCCAC
* *
34399 CA-ATGTTGTAAAAAGTCATAAAGTTCGTGCCTCAAATG
232 CATTTTTTGT--AAAGTC-T-AAGTTCGTGCCTCAAATG
34437 GAGCGCACAA
Statistics
Matches: 11425, Mismatches: 989, Indels: 2340
0.77 0.07 0.16
Matches are distributed among these distances:
467 23 0.00
468 48 0.00
469 66 0.01
470 55 0.00
471 99 0.01
472 121 0.01
473 192 0.02
474 189 0.02
475 119 0.01
476 164 0.01
477 355 0.03
478 354 0.03
479 513 0.04
480 460 0.04
481 475 0.04
482 485 0.04
483 529 0.05
484 462 0.04
485 284 0.02
486 163 0.01
487 180 0.02
488 281 0.02
489 262 0.02
490 231 0.02
491 212 0.02
492 154 0.01
493 132 0.01
494 157 0.01
495 169 0.01
496 213 0.02
497 198 0.02
498 162 0.01
499 215 0.02
500 111 0.01
501 129 0.01
502 171 0.01
503 223 0.02
504 217 0.02
505 233 0.02
506 170 0.01
507 180 0.02
508 244 0.02
509 201 0.02
510 178 0.02
511 97 0.01
512 95 0.01
513 40 0.00
514 128 0.01
515 108 0.01
516 69 0.01
517 171 0.01
518 94 0.01
519 73 0.01
520 131 0.01
521 177 0.02
522 143 0.01
523 63 0.01
524 44 0.00
525 47 0.00
526 9 0.00
527 22 0.00
528 9 0.00
529 20 0.00
530 2 0.00
531 1 0.00
532 4 0.00
533 7 0.00
534 10 0.00
535 17 0.00
536 6 0.00
537 6 0.00
538 26 0.00
539 2 0.00
540 2 0.00
541 2 0.00
542 13 0.00
543 8 0.00
ACGTcount: A:0.29, C:0.19, G:0.17, T:0.36
Consensus pattern (476 bp):
GCAAAAGCATATTCCTTTCGTTAGGATACATGGCATTGATGCTTTGGTGTTGCAAGAAAATGTGT
TCTTTCCACCGTTTTTGATAGAAATAAAGTTTGTCTCTTAAATAAGACAAACAAGAATTGTCATG
CTAATCCCCATTCTTTTCATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACTATAT
TAATGCTTTGGTTTCGTAAGAAAGGTTTCTTGCCACCATTTTTTGTAAAGTCTAAGTTCGTGCCT
CAAATGAGACTAAACGAGGATTCTAGTAATGAACTTCATTCATTTTGTGATTAGGCACTATAAAC
GCATTCTCTTCATTAGGATAAACGATATTGATTGTTTTCTTTTCCGTTGAAATCTTTTCTTTGCA
CTGTTTTCCTTAATATCAAAATTCTTCCCTTAAATACGACAAGCATCAATTCTTATAAAAGTCTC
CATTTTCTTCGAGATTAGGAA
Found at i:34603 original size:9 final size:9
Alignment explanation
Indices: 34589--34623 Score: 54
Period size: 9 Copynumber: 4.0 Consensus size: 9
34579 AAAAAAGAGC
34589 GGGGGGGAA
1 GGGGGGGAA
*
34598 GGGGGGG-G
1 GGGGGGGAA
34606 GGGGGGGAA
1 GGGGGGGAA
34615 GGGGGGGAA
1 GGGGGGGAA
34624 AAAGGAGGGA
Statistics
Matches: 23, Mismatches: 2, Indels: 2
0.85 0.07 0.07
Matches are distributed among these distances:
8 7 0.30
9 16 0.70
ACGTcount: A:0.17, C:0.00, G:0.83, T:0.00
Consensus pattern (9 bp):
GGGGGGGAA
Found at i:34611 original size:17 final size:17
Alignment explanation
Indices: 34589--34621 Score: 66
Period size: 17 Copynumber: 1.9 Consensus size: 17
34579 AAAAAAGAGC
34589 GGGGGGGAAGGGGGGGG
1 GGGGGGGAAGGGGGGGG
34606 GGGGGGGAAGGGGGGG
1 GGGGGGGAAGGGGGGG
34622 AAAAAGGAGG
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 16 1.00
ACGTcount: A:0.12, C:0.00, G:0.88, T:0.00
Consensus pattern (17 bp):
GGGGGGGAAGGGGGGGG
Found at i:34668 original size:21 final size:20
Alignment explanation
Indices: 34627--34673 Score: 60
Period size: 21 Copynumber: 2.3 Consensus size: 20
34617 GGGGGAAAAA
*
34627 GGAGGGAAAAGAAAAGGAGG
1 GGAGGGAAAAGAAAAGAAGG
34647 GAGAGGGAGAAAGAAAA-AAGG
1 G-GAGGGA-AAAGAAAAGAAGG
34668 GGAGGG
1 GGAGGG
34674 GGGGAAGAAG
Statistics
Matches: 24, Mismatches: 1, Indels: 4
0.83 0.03 0.14
Matches are distributed among these distances:
20 6 0.25
21 10 0.42
22 8 0.33
ACGTcount: A:0.49, C:0.00, G:0.51, T:0.00
Consensus pattern (20 bp):
GGAGGGAAAAGAAAAGAAGG
Found at i:34670 original size:22 final size:23
Alignment explanation
Indices: 34628--34689 Score: 58
Period size: 22 Copynumber: 2.7 Consensus size: 23
34618 GGGGAAAAAG
*
34628 GAGGGA-AAAG-AAAAGGAGGGA
1 GAGGGAGAAAGAAAAAAGAGGGA
34649 GAGGGAGAAAGAAAAAAG-GGGA
1 GAGGGAGAAAGAAAAAAGAGGGA
* *
34671 GGGGGGGAAGAAGAAAAAA
1 GAGGGAG-A-AAGAAAAAA
34690 AAAAAGAAAA
Statistics
Matches: 34, Mismatches: 3, Indels: 5
0.81 0.07 0.12
Matches are distributed among these distances:
21 6 0.18
22 13 0.38
23 6 0.18
24 9 0.26
ACGTcount: A:0.53, C:0.00, G:0.47, T:0.00
Consensus pattern (23 bp):
GAGGGAGAAAGAAAAAAGAGGGA
Found at i:34678 original size:24 final size:26
Alignment explanation
Indices: 34642--34689 Score: 66
Period size: 24 Copynumber: 1.9 Consensus size: 26
34632 GAAAAGAAAA
34642 GGAGGGAGAGGG-AGAAAGAAAAAAGG
1 GGAGGGAGAGGGAAG-AAGAAAAAAGG
34668 GGAGGG-G-GGGAAGAAGAAAAAA
1 GGAGGGAGAGGGAAGAAGAAAAAA
34690 AAAAAGAAAA
Statistics
Matches: 21, Mismatches: 0, Indels: 4
0.84 0.00 0.16
Matches are distributed among these distances:
24 12 0.57
25 3 0.14
26 6 0.29
ACGTcount: A:0.50, C:0.00, G:0.50, T:0.00
Consensus pattern (26 bp):
GGAGGGAGAGGGAAGAAGAAAAAAGG
Found at i:34770 original size:18 final size:17
Alignment explanation
Indices: 34749--34782 Score: 50
Period size: 17 Copynumber: 1.9 Consensus size: 17
34739 AGGGGGAGGG
34749 AAAGGGGAAGGGAAAAAC
1 AAAGGGG-AGGGAAAAAC
*
34767 AAAGGGGGGGGAAAAA
1 AAAGGGGAGGGAAAAA
34783 GGGGGGGGGG
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
17 8 0.53
18 7 0.47
ACGTcount: A:0.53, C:0.03, G:0.44, T:0.00
Consensus pattern (17 bp):
AAAGGGGAGGGAAAAAC
Found at i:34780 original size:17 final size:16
Alignment explanation
Indices: 34758--34804 Score: 58
Period size: 16 Copynumber: 2.9 Consensus size: 16
34748 GAAAGGGGAA
34758 GGGAAAAACAAAGGGGG
1 GGGAAAAA-AAAGGGGG
***
34775 GGGAAAAAGGGGGGGG
1 GGGAAAAAAAAGGGGG
34791 GGGAAAAAAAAGGG
1 GGGAAAAAAAAGGG
34805 AGAGGAGGGG
Statistics
Matches: 24, Mismatches: 6, Indels: 1
0.77 0.19 0.03
Matches are distributed among these distances:
16 16 0.67
17 8 0.33
ACGTcount: A:0.45, C:0.02, G:0.53, T:0.00
Consensus pattern (16 bp):
GGGAAAAAAAAGGGGG
Found at i:34847 original size:30 final size:30
Alignment explanation
Indices: 34787--34847 Score: 72
Period size: 31 Copynumber: 2.0 Consensus size: 30
34777 GAAAAAGGGG
*
34787 GGGGGGGAAAAAAAAGGGAGAGGAGGGGGAA
1 GGGGGGGAAAAAAAAGGGAGA-GAGAGGGAA
34818 GGGGGGGAAAAAAGGAAGGGA-A-AGAGGGAA
1 GGGGGGGAAAAAA--AAGGGAGAGAGAGGGAA
34848 AAAAAGGGAA
Statistics
Matches: 27, Mismatches: 1, Indels: 5
0.82 0.03 0.15
Matches are distributed among these distances:
30 7 0.26
31 13 0.48
32 1 0.04
33 6 0.22
ACGTcount: A:0.44, C:0.00, G:0.56, T:0.00
Consensus pattern (30 bp):
GGGGGGGAAAAAAAAGGGAGAGAGAGGGAA
Found at i:34865 original size:14 final size:14
Alignment explanation
Indices: 34846--34886 Score: 55
Period size: 15 Copynumber: 2.9 Consensus size: 14
34836 GGAAAGAGGG
34846 AAAAAAAGGGAAAA
1 AAAAAAAGGGAAAA
*
34860 AAAAAAAGAGGGAAA
1 AAAAAAAG-GGAAAA
*
34875 AAAAAAGGGGAA
1 AAAAAAAGGGAA
34887 GAAAGGGAAG
Statistics
Matches: 23, Mismatches: 3, Indels: 2
0.82 0.11 0.07
Matches are distributed among these distances:
14 11 0.48
15 12 0.52
ACGTcount: A:0.73, C:0.00, G:0.27, T:0.00
Consensus pattern (14 bp):
AAAAAAAGGGAAAA
Found at i:34871 original size:16 final size:15
Alignment explanation
Indices: 34846--34880 Score: 61
Period size: 16 Copynumber: 2.3 Consensus size: 15
34836 GGAAAGAGGG
34846 AAAAAAAGGGAAAAA
1 AAAAAAAGGGAAAAA
34861 AAAAAAGAGGGAAAAA
1 AAAAAA-AGGGAAAAA
34877 AAAA
1 AAAA
34881 GGGGAAGAAA
Statistics
Matches: 19, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
15 6 0.32
16 13 0.68
ACGTcount: A:0.80, C:0.00, G:0.20, T:0.00
Consensus pattern (15 bp):
AAAAAAAGGGAAAAA
Found at i:34890 original size:16 final size:16
Alignment explanation
Indices: 34846--34890 Score: 53
Period size: 14 Copynumber: 3.1 Consensus size: 16
34836 GGAAAGAGGG
34846 AAAAAAA-GGGAA-AA
1 AAAAAAAGGGGAAGAA
*
34860 AAAAAAAGAGG--GAA
1 AAAAAAAGGGGAAGAA
34874 AAAAAAAGGGGAAGAA
1 AAAAAAAGGGGAAGAA
34890 A
1 A
34891 GGGAAGGAAA
Statistics
Matches: 25, Mismatches: 2, Indels: 6
0.76 0.06 0.18
Matches are distributed among these distances:
14 19 0.76
15 2 0.08
16 4 0.16
ACGTcount: A:0.73, C:0.00, G:0.27, T:0.00
Consensus pattern (16 bp):
AAAAAAAGGGGAAGAA
Found at i:34891 original size:24 final size:23
Alignment explanation
Indices: 34868--34921 Score: 65
Period size: 24 Copynumber: 2.3 Consensus size: 23
34858 AAAAAAAAAG
*
34868 AGGGAAAAAAAAAGGGGAAG-AA
1 AGGGAAAAAAAAAGGAGAAGAAA
*
34890 AGGGAAGGAAAAAGAGGAGAAGAAA
1 AGGGAA--AAAAAAAGGAGAAGAAA
34915 AGGGAAA
1 AGGGAAA
34922 GAGGGAGGGG
Statistics
Matches: 27, Mismatches: 2, Indels: 5
0.79 0.06 0.15
Matches are distributed among these distances:
22 6 0.22
23 1 0.04
24 12 0.44
25 8 0.30
ACGTcount: A:0.61, C:0.00, G:0.39, T:0.00
Consensus pattern (23 bp):
AGGGAAAAAAAAAGGAGAAGAAA
Found at i:34901 original size:25 final size:25
Alignment explanation
Indices: 34874--34920 Score: 69
Period size: 24 Copynumber: 1.9 Consensus size: 25
34864 AAAGAGGGAA
*
34874 AAAAAAAGGGGAAG-AAAGGGAAGG
1 AAAAAAAGGAGAAGAAAAGGGAAGG
*
34898 AAAAAGAGGAGAAGAAAAGGGAA
1 AAAAAAAGGAGAAGAAAAGGGAA
34921 AGAGGGAGGG
Statistics
Matches: 20, Mismatches: 2, Indels: 1
0.87 0.09 0.04
Matches are distributed among these distances:
24 12 0.60
25 8 0.40
ACGTcount: A:0.62, C:0.00, G:0.38, T:0.00
Consensus pattern (25 bp):
AAAAAAAGGAGAAGAAAAGGGAAGG
Found at i:34970 original size:19 final size:22
Alignment explanation
Indices: 34933--34975 Score: 56
Period size: 22 Copynumber: 2.1 Consensus size: 22
34923 AGGGAGGGGG
*
34933 AGAAAAAAAGGAAGAAGGGCGA
1 AGAAAAAAAGGAAGAAGGGAGA
34955 AGAAAAAAA-G-AG-AGGGAGA
1 AGAAAAAAAGGAAGAAGGGAGA
34974 AG
1 AG
34976 GGGGGGAAAA
Statistics
Matches: 20, Mismatches: 1, Indels: 3
0.83 0.04 0.12
Matches are distributed among these distances:
19 8 0.40
20 2 0.10
21 1 0.05
22 9 0.45
ACGTcount: A:0.60, C:0.02, G:0.37, T:0.00
Consensus pattern (22 bp):
AGAAAAAAAGGAAGAAGGGAGA
Found at i:35005 original size:13 final size:13
Alignment explanation
Indices: 34973--35014 Score: 61
Period size: 13 Copynumber: 3.4 Consensus size: 13
34963 AGAGAGGGAG
*
34973 AAGGGGGGGAA-A
1 AAGGGGGAGAAGA
34985 AA-GGGGAGAAGA
1 AAGGGGGAGAAGA
34997 AAGGGGGAGAAGA
1 AAGGGGGAGAAGA
35010 AAGGG
1 AAGGG
35015 AAAAAGGGAA
Statistics
Matches: 27, Mismatches: 1, Indels: 3
0.87 0.03 0.10
Matches are distributed among these distances:
11 7 0.26
12 5 0.19
13 15 0.56
ACGTcount: A:0.45, C:0.00, G:0.55, T:0.00
Consensus pattern (13 bp):
AAGGGGGAGAAGA
Found at i:35031 original size:19 final size:21
Alignment explanation
Indices: 35009--35053 Score: 53
Period size: 19 Copynumber: 2.3 Consensus size: 21
34999 GGGGGAGAAG
*
35009 AAAGGGAA-AAAG-GGAAAAA
1 AAAGGGAAGAAAGAGAAAAAA
35028 AAA--GAAGAAAGAGAAAAAA
1 AAAGGGAAGAAAGAGAAAAAA
35047 AAAGGGA
1 AAAGGGA
35054 GGGAAGAAAG
Statistics
Matches: 21, Mismatches: 1, Indels: 6
0.75 0.04 0.21
Matches are distributed among these distances:
17 3 0.14
18 4 0.19
19 12 0.57
21 2 0.10
ACGTcount: A:0.71, C:0.00, G:0.29, T:0.00
Consensus pattern (21 bp):
AAAGGGAAGAAAGAGAAAAAA
Found at i:35072 original size:34 final size:35
Alignment explanation
Indices: 35034--35099 Score: 91
Period size: 35 Copynumber: 1.9 Consensus size: 35
35024 AAAAAAAGAA
*
35034 GAAAGA-GAAAAA-AAAAGGGAGGGAAGAAAGGAGG
1 GAAAGAGGAAAAAGAAAAGGG-GGAAAGAAAGGAGG
*
35068 GAAAGAGGAAAAAGGAAAGGGGGAAAGAAAGG
1 GAAAGAGGAAAAAGAAAAGGGGGAAAGAAAGG
35100 GGGGGGGGGA
Statistics
Matches: 28, Mismatches: 2, Indels: 3
0.85 0.06 0.09
Matches are distributed among these distances:
34 6 0.21
35 16 0.57
36 6 0.21
ACGTcount: A:0.58, C:0.00, G:0.42, T:0.00
Consensus pattern (35 bp):
GAAAGAGGAAAAAGAAAAGGGGGAAAGAAAGGAGG
Found at i:35087 original size:87 final size:87
Alignment explanation
Indices: 34934--35100 Score: 205
Period size: 86 Copynumber: 1.9 Consensus size: 87
34924 GGGAGGGGGA
* * * * * * *
34934 GAAAAAAAGGAAGAAGGGCGAAGAAAAAAAGAGAGGGAGAAGGGGGGGAAAAAGGGGAGAAGAAA
1 GAAAAAAAAGAAGAAGAGAGAAGAAAAAAAGAGAGGGAGAAAGGAGGGAAAAAGGGAAAAAGAAA
34999 GGGGGAGAAGAAAGGGAAAAAGG
66 GGGGGA-AAGAAAGGGAAAAAGG
* *
35022 GAAAAAAAAGAAGAA-AGAGAA-AAAAAAAGGGAGGGAAGAAAGGAGGGAAAGA-GGAAAAAGGA
1 GAAAAAAAAGAAGAAGAGAGAAGAAAAAAAGAGAGGG-AGAAAGGAGGGAAAAAGGGAAAAA-GA
35084 AAGGGGGAAAGAAAGGG
64 AAGGGGGAAAGAAAGGG
35101 GGGGGGGGAG
Statistics
Matches: 68, Mismatches: 9, Indels: 6
0.82 0.11 0.07
Matches are distributed among these distances:
86 27 0.40
87 27 0.40
88 14 0.21
ACGTcount: A:0.57, C:0.01, G:0.43, T:0.00
Consensus pattern (87 bp):
GAAAAAAAAGAAGAAGAGAGAAGAAAAAAAGAGAGGGAGAAAGGAGGGAAAAAGGGAAAAAGAAA
GGGGGAAAGAAAGGGAAAAAGG
Found at i:35114 original size:13 final size:13
Alignment explanation
Indices: 35098--35150 Score: 63
Period size: 13 Copynumber: 3.9 Consensus size: 13
35088 GGGAAAGAAA
35098 GGGGGGGGGGGAG
1 GGGGGGGGGGGAG
35111 GGGGGGGGGGGAAG
1 GGGGGGGGGGG-AG
35125 GGGAGGGGGGGG-G
1 GGG-GGGGGGGGAG
*
35138 GAGAGGGGGGGGA
1 G-GGGGGGGGGGA
35151 AAGGAGGGAA
Statistics
Matches: 35, Mismatches: 1, Indels: 7
0.81 0.02 0.16
Matches are distributed among these distances:
13 21 0.60
14 6 0.17
15 8 0.23
ACGTcount: A:0.13, C:0.00, G:0.87, T:0.00
Consensus pattern (13 bp):
GGGGGGGGGGGAG
Found at i:35120 original size:30 final size:32
Alignment explanation
Indices: 35086--35149 Score: 94
Period size: 31 Copynumber: 2.0 Consensus size: 32
35076 AAAAAGGAAA
35086 GGGGGAAAGAAAGGGGGGGGGG-GAGGGGGGG
1 GGGGGAAAGAAAGGGGGGGGGGAGAGGGGGGG
* **
35117 GGGGGAAGGGGAGGGGGGGGGGAGAGGGGGGG
1 GGGGGAAAGAAAGGGGGGGGGGAGAGGGGGGG
35149 G
1 G
35150 AAAGGAGGGA
Statistics
Matches: 29, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
31 19 0.66
32 10 0.34
ACGTcount: A:0.19, C:0.00, G:0.81, T:0.00
Consensus pattern (32 bp):
GGGGGAAAGAAAGGGGGGGGGGAGAGGGGGGG
Found at i:35144 original size:32 final size:35
Alignment explanation
Indices: 35097--35177 Score: 109
Period size: 36 Copynumber: 2.4 Consensus size: 35
35087 GGGGAAAGAA
35097 AGGGGGGGGGG-GA-GGGGGGG-GG-GGGAAGGGG
1 AGGGGGGGGGGAGAGGGGGGGGAGGAGGGAAGGGG
35128 AGGGGGGGGGGAGAGGGGGGGGAAAGGAGGGAAGGGG
1 AGGGGGGGGGGAGAGGGGGGGG--AGGAGGGAAGGGG
35165 -GGGGGGGGGGAGA
1 AGGGGGGGGGGAGA
35178 ACAAGATATG
Statistics
Matches: 44, Mismatches: 0, Indels: 7
0.86 0.00 0.14
Matches are distributed among these distances:
31 11 0.25
32 2 0.05
33 7 0.16
36 15 0.34
37 9 0.20
ACGTcount: A:0.19, C:0.00, G:0.81, T:0.00
Consensus pattern (35 bp):
AGGGGGGGGGGAGAGGGGGGGGAGGAGGGAAGGGG
Found at i:35169 original size:1 final size:1
Alignment explanation
Indices: 35098--35149 Score: 50
Period size: 1 Copynumber: 52.0 Consensus size: 1
35088 GGGAAAGAAA
* ** * * *
35098 GGGGGGGGGGGAGGGGGGGGGGGGAAGGGGAGGGGGGGGGGAGAGGGGGGGG
1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
35150 AAAGGAGGGA
Statistics
Matches: 41, Mismatches: 10, Indels: 0
0.80 0.20 0.00
Matches are distributed among these distances:
1 41 1.00
ACGTcount: A:0.12, C:0.00, G:0.88, T:0.00
Consensus pattern (1 bp):
G
Done.