Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2364
Parameters: 2 7 7 80 10 50 1000
Length:  26228

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3756--3806
13
3.9
13
97
0
93
31
15
17
35
1.92
5629--5672
21
2.1
21
95
0
79
36
0
13
50
1.42
6110--6151
21
2.0
22
86
13
61
40
7
14
38
1.73
6271--6295
13
1.9
13
100
0
50
32
16
16
36
1.90
6384--6409
13
2.0
13
100
0
52
38
15
15
30
1.88
6366--6429
33
2.0
32
87
3
92
39
18
12
29
1.88
10014--10176
89
1.8
89
85
0
227
36
4
9
49
1.54
10843--10883
6
6.7
6
91
5
55
73
2
0
24
0.96
10834--10885
26
2.0
26
88
0
77
71
3
0
25
1.03
10834--10885
6
8.2
6
83
12
50
71
3
0
25
1.03
10834--10885
13
4.1
13
77
2
61
71
3
0
25
1.03
10878--11012
35
3.9
35
98
0
261
42
5
31
20
1.76
10903--11003
21
5.5
20
65
29
73
42
5
31
19
1.75
12421--13090
79
8.4
79
93
1
1072
26
26
14
32
1.95
15532--15581
25
2.0
25
100
0
100
28
12
20
40
1.87
16729--17049
92
3.5
90
72
8
240
30
20
11
37
1.88
17461--17728
146
1.8
146
83
3
351
39
16
9
35
1.80
20302--20364
2
32.5
2
77
6
58
39
1
0
58
1.07
20292--20372
17
4.8
17
76
10
76
37
1
0
61
1.04
20292--20358
6
11.7
6
82
9
77
37
0
0
62
0.95
20302--20396
46
2.1
46
82
7
113
37
2
0
60
1.09
21060--21105
19
2.4
18
82
7
56
73
8
0
17
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21341--21371
12
2.7
11
90
9
53
19
0
0
80
0.71
21654--21701
14
3.6
14
76
21
57
35
2
0
62
1.07
22348--22413
30
2.2
29
86
7
89
43
0
0
56
0.99
22350--22401
14
3.6
14
74
20
54
40
0
0
59
0.97
23904--23934
16
1.9
16
93
0
53
29
6
12
51
1.65
24882--24944
33
1.9
33
96
0
117
39
6
1
52
1.37

Tables:   1

The End!