Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2365
Parameters: 2 7 7 80 10 50 1000
Length:  29749

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5515--5570
27
2.0
28
86
3
78
46
8
16
28
1.77
9577--9644
29
2.4
28
73
11
66
38
1
13
47
1.52
9942--9982
2
21.0
2
90
5
66
53
0
0
46
1.00
9942--9992
25
2.0
25
92
7
86
54
0
1
43
1.11
13015--13210
50
3.9
50
90
0
293
31
16
19
32
1.94
17403--17463
20
3.0
20
95
0
113
40
9
26
22
1.85
18568--18594
14
1.9
14
100
0
54
81
0
0
18
0.69
21026--21128
36
3.2
36
60
28
84
26
25
19
29
1.99
21026--22424
55
24.9
55
87
6
1778
27
28
19
23
1.98
23261--23328
19
3.9
19
78
21
85
35
11
14
38
1.83
23263--23325
32
2.0
32
96
0
117
34
12
15
36
1.86
23282--23306
13
1.9
13
100
0
50
36
16
16
32
1.90
23368--23393
13
2.0
13
100
0
52
30
15
15
38
1.88
23348--23414
33
2.0
33
88
0
98
25
14
16
43
1.86
25868--25943
27
2.8
27
88
6
100
23
30
21
25
1.99
25821--26209
107
3.6
106
73
11
326
27
27
13
31
1.94
25926--26095
52
3.3
51
76
11
175
29
25
12
32
1.93
25759--26094
104
3.2
103
71
13
297
30
25
12
32
1.92
26079--26155
28
2.8
28
87
0
100
23
33
19
23
1.97
25757--26162
212
1.9
212
88
3
611
28
26
13
31
1.94
26109--26309
77
2.6
79
82
4
230
24
30
16
28
1.96
29695--29730
2
18.0
2
94
0
63
52
0
0
47
1.00

Tables:   1

The End!