Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2369
Parameters: 2 7 7 80 10 50 1000
Length:  30039

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
211--244
9
3.7
9
88
4
50
0
20
0
79
0.73
206--257
10
5.1
10
80
13
61
1
19
0
78
0.84
206--257
21
2.5
20
80
14
61
1
19
0
78
0.84
231--261
13
2.4
13
100
0
62
0
16
0
83
0.64
531--589
27
2.2
27
96
0
109
55
10
10
23
1.63
728--1078
158
2.2
162
84
7
443
51
8
8
31
1.63
6644--6738
36
3.0
30
75
19
86
30
26
12
30
1.93
7186--7222
13
2.8
13
91
0
56
37
16
13
32
1.87
7272--7333
32
1.9
33
86
3
90
40
14
16
29
1.88
8136--8194
30
1.9
32
82
6
77
35
28
6
28
1.83
8111--8367
86
3.0
86
91
1
415
28
26
6
39
1.80
8315--8376
30
2.0
31
90
3
99
33
30
4
30
1.79
9439--9463
13
1.9
13
100
0
50
32
16
16
36
1.90
9451--9499
19
2.6
19
100
0
98
30
24
16
28
1.96
9571--9596
13
2.0
13
100
0
52
30
15
15
38
1.88
9551--9616
32
2.0
33
88
8
100
34
16
16
31
1.92
18271--18325
19
2.8
19
80
5
65
36
16
16
30
1.91
18355--18424
34
2.1
33
82
12
81
34
15
14
35
1.88
22527--22595
33
2.1
33
84
10
88
36
20
10
33
1.86
22624--22680
19
3.0
20
79
7
73
31
15
17
35
1.92
22665--22689
13
1.9
13
100
0
50
32
16
16
36
1.90
22646--22710
33
2.0
32
84
3
85
36
13
16
32
1.89

Tables:   1

The End!