Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2381
Parameters: 2 7 7 80 10 50 1000
Length:  44680

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12980--13009
2
15.0
2
100
0
60
50
0
0
50
1.00
13204--13246
22
1.9
22
90
4
68
55
0
0
44
0.99
13609--13644
2
18.0
2
100
0
72
50
0
0
50
1.00
14077--14102
13
2.0
13
100
0
52
30
0
0
69
0.89
20748--20772
13
1.9
13
100
0
50
32
8
0
60
1.26
21229--21301
38
1.9
38
85
0
101
42
8
5
43
1.57
22407--22478
17
4.2
17
76
13
76
45
0
4
50
1.21
22430--22486
17
3.5
15
76
17
60
43
0
3
52
1.18
25619--25652
15
2.3
15
89
0
50
29
23
0
47
1.52
26914--26951
16
2.4
16
82
4
51
39
2
0
57
1.12
27574--27608
16
2.2
16
100
0
70
42
14
11
31
1.81
32207--32253
13
3.8
12
80
8
58
34
12
2
51
1.52
32655--32727
38
1.9
38
85
0
101
46
6
2
43
1.44
32683--32732
23
2.2
23
85
7
66
44
8
0
48
1.32
33858--33887
10
3.0
10
90
0
51
53
0
0
46
1.00
33873--33933
17
3.4
17
77
18
54
44
0
3
52
1.17
37059--37092
15
2.3
15
89
0
50
29
23
0
47
1.52
38354--38391
16
2.4
16
82
4
51
39
2
0
57
1.12
39014--39048
16
2.2
16
100
0
70
42
14
11
31
1.81
43653--43699
13
3.8
12
76
18
51
34
10
2
53
1.48

Tables:   1

The End!