Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2393
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 32652
ACGTcount: A:0.37, C:0.16, G:0.13, T:0.34
Found at i:5214 original size:42 final size:42
Alignment explanation
Indices: 5145--5267 Score: 167
Period size: 42 Copynumber: 2.9 Consensus size: 42
5135 TCACTCTTCC
* * * * *
5145 ATCT-TCTTCTCTCCTCCTTCTGTCATCCCTCCTCTCTCTATT
1 ATCTCTCTTGTCT-CTCCTCCTATCATCCCTCCTATCTCTACT
5187 ATCTCTCTTGTCTCTCCTCCTATCATCCCTCCTATCTCTACT
1 ATCTCTCTTGTCTCTCCTCCTATCATCCCTCCTATCTCTACT
* *
5229 ATCTCTCCTGTCTCTCCTCCTATCATCCCTCCTTTCTCT
1 ATCTCTCTTGTCTCTCCTCCTATCATCCCTCCTATCTCT
5268 TCTTTCTTTT
Statistics
Matches: 73, Mismatches: 7, Indels: 2
0.89 0.09 0.02
Matches are distributed among these distances:
42 66 0.90
43 7 0.10
ACGTcount: A:0.09, C:0.44, G:0.02, T:0.45
Consensus pattern (42 bp):
ATCTCTCTTGTCTCTCCTCCTATCATCCCTCCTATCTCTACT
Found at i:6042 original size:19 final size:19
Alignment explanation
Indices: 6018--6058 Score: 73
Period size: 19 Copynumber: 2.2 Consensus size: 19
6008 GCTGGCTTTT
6018 TTTCTTTCTTTTTGTATTC
1 TTTCTTTCTTTTTGTATTC
*
6037 TTTCTTTTTTTTTGTATTC
1 TTTCTTTCTTTTTGTATTC
6056 TTT
1 TTT
6059 AAAAAAAATA
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
19 21 1.00
ACGTcount: A:0.05, C:0.12, G:0.05, T:0.78
Consensus pattern (19 bp):
TTTCTTTCTTTTTGTATTC
Found at i:11369 original size:18 final size:18
Alignment explanation
Indices: 11346--11381 Score: 54
Period size: 18 Copynumber: 2.0 Consensus size: 18
11336 TTAATTCCTT
*
11346 TTAAATAATAATATAAAA
1 TTAAATAATAAAATAAAA
*
11364 TTAAATTATAAAATAAAA
1 TTAAATAATAAAATAAAA
11382 AAGTAAAATT
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 16 1.00
ACGTcount: A:0.67, C:0.00, G:0.00, T:0.33
Consensus pattern (18 bp):
TTAAATAATAAAATAAAA
Found at i:14869 original size:16 final size:17
Alignment explanation
Indices: 14839--14871 Score: 59
Period size: 16 Copynumber: 2.0 Consensus size: 17
14829 CTTTAAAGCC
14839 TTGAAATTATTTATAAT
1 TTGAAATTATTTATAAT
14856 TTGAAATT-TTTATAAT
1 TTGAAATTATTTATAAT
14872 GAATTCAAAA
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
16 8 0.50
17 8 0.50
ACGTcount: A:0.39, C:0.00, G:0.06, T:0.55
Consensus pattern (17 bp):
TTGAAATTATTTATAAT
Found at i:14874 original size:14 final size:16
Alignment explanation
Indices: 14839--14871 Score: 50
Period size: 17 Copynumber: 2.1 Consensus size: 16
14829 CTTTAAAGCC
14839 TTGAAATTATTTATAA
1 TTGAAATTATTTATAA
14855 TTTGAAATT-TTTATAA
1 -TTGAAATTATTTATAA
14871 T
1 T
14872 GAATTCAAAA
Statistics
Matches: 16, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
15 1 0.06
16 7 0.44
17 8 0.50
ACGTcount: A:0.39, C:0.00, G:0.06, T:0.55
Consensus pattern (16 bp):
TTGAAATTATTTATAA
Found at i:16705 original size:10 final size:10
Alignment explanation
Indices: 16686--16716 Score: 53
Period size: 10 Copynumber: 3.1 Consensus size: 10
16676 GTATCGATAC
16686 ATGAACAGTG
1 ATGAACAGTG
*
16696 ATGAATAGTG
1 ATGAACAGTG
16706 ATGAACAGTG
1 ATGAACAGTG
16716 A
1 A
16717 AAATGAGATT
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
10 19 1.00
ACGTcount: A:0.42, C:0.06, G:0.29, T:0.23
Consensus pattern (10 bp):
ATGAACAGTG
Found at i:16804 original size:53 final size:53
Alignment explanation
Indices: 16740--16876 Score: 238
Period size: 53 Copynumber: 2.6 Consensus size: 53
16730 CTACTACCAA
*
16740 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAGTGACC
1 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
* *
16793 TGTATCGATACATATTGTGTGTATCGATACAAATTTGGCTACTGCCAATGTCC
1 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
16846 TGTATCGATACATATTTGTGTGTATCGATAC
1 TGTATCGATACATATTT-TGTGTATCGATAC
16877 TATGCAATCT
Statistics
Matches: 79, Mismatches: 4, Indels: 1
0.94 0.05 0.01
Matches are distributed among these distances:
53 66 0.84
54 13 0.16
ACGTcount: A:0.26, C:0.18, G:0.19, T:0.37
Consensus pattern (53 bp):
TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
Found at i:16909 original size:20 final size:20
Alignment explanation
Indices: 16846--16916 Score: 74
Period size: 20 Copynumber: 3.5 Consensus size: 20
16836 GCCAATGTCC
**
16846 TGTATCGATACATATTTGTG
1 TGTATCGATACATATTAATG
* *
16866 TGTATCGATAC-TATGCAATC
1 TGTATCGATACATAT-TAATG
16886 TGTATCGATACAT-TTAAATG
1 TGTATCGATACATATT-AATG
16906 TGTATCGATAC
1 TGTATCGATAC
16917 TTTTCAGGGT
Statistics
Matches: 42, Mismatches: 6, Indels: 6
0.78 0.11 0.11
Matches are distributed among these distances:
19 3 0.07
20 38 0.90
21 1 0.02
ACGTcount: A:0.30, C:0.14, G:0.17, T:0.39
Consensus pattern (20 bp):
TGTATCGATACATATTAATG
Found at i:16980 original size:21 final size:21
Alignment explanation
Indices: 16956--16996 Score: 57
Period size: 21 Copynumber: 2.0 Consensus size: 21
16946 GTCAATCTTG
16956 TGTATTAATACCAATA-GTATA
1 TGTATTAATA-CAATACGTATA
*
16977 TGTATTGATACAATACGTAT
1 TGTATTAATACAATACGTAT
16997 TTTTACTTAA
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
20 5 0.28
21 13 0.72
ACGTcount: A:0.39, C:0.10, G:0.12, T:0.39
Consensus pattern (21 bp):
TGTATTAATACAATACGTATA
Found at i:18743 original size:26 final size:28
Alignment explanation
Indices: 18714--18766 Score: 74
Period size: 28 Copynumber: 2.0 Consensus size: 28
18704 CATAATAATA
18714 TAAAATTAA-A-TTATAAAATAAAAAAG
1 TAAAATTAATATTTATAAAATAAAAAAG
**
18740 TAAAATTAATATTTATAATTTAAAAAA
1 TAAAATTAATATTTATAAAATAAAAAA
18767 ATAATTTAAA
Statistics
Matches: 23, Mismatches: 2, Indels: 2
0.85 0.07 0.07
Matches are distributed among these distances:
26 9 0.39
27 1 0.04
28 13 0.57
ACGTcount: A:0.64, C:0.00, G:0.02, T:0.34
Consensus pattern (28 bp):
TAAAATTAATATTTATAAAATAAAAAAG
Found at i:20144 original size:10 final size:10
Alignment explanation
Indices: 20126--20158 Score: 57
Period size: 10 Copynumber: 3.3 Consensus size: 10
20116 GTATTATAAT
*
20126 TATATATTTA
1 TATAAATTTA
20136 TATAAATTTA
1 TATAAATTTA
20146 TATAAATTTA
1 TATAAATTTA
20156 TAT
1 TAT
20159 TATTTTTATA
Statistics
Matches: 22, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
10 22 1.00
ACGTcount: A:0.45, C:0.00, G:0.00, T:0.55
Consensus pattern (10 bp):
TATAAATTTA
Found at i:20686 original size:3 final size:3
Alignment explanation
Indices: 20678--20716 Score: 78
Period size: 3 Copynumber: 13.0 Consensus size: 3
20668 AACATGAAAA
20678 AAT AAT AAT AAT AAT AAT AAT AAT AAT AAT AAT AAT AAT
1 AAT AAT AAT AAT AAT AAT AAT AAT AAT AAT AAT AAT AAT
20717 TTTTTGAAAT
Statistics
Matches: 36, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 36 1.00
ACGTcount: A:0.67, C:0.00, G:0.00, T:0.33
Consensus pattern (3 bp):
AAT
Found at i:21051 original size:14 final size:14
Alignment explanation
Indices: 21034--21076 Score: 50
Period size: 14 Copynumber: 3.0 Consensus size: 14
21024 AAAACAATAA
* *
21034 TGAAAATTAAGAAT
1 TGAAAATAAAAAAT
*
21048 TGAAAAGAAAAAAT
1 TGAAAATAAAAAAT
21062 TGAAAATAAATAAAT
1 TGAAAATAAA-AAAT
21077 ATAATTTAAC
Statistics
Matches: 24, Mismatches: 4, Indels: 1
0.83 0.14 0.03
Matches are distributed among these distances:
14 20 0.83
15 4 0.17
ACGTcount: A:0.65, C:0.00, G:0.12, T:0.23
Consensus pattern (14 bp):
TGAAAATAAAAAAT
Found at i:21967 original size:21 final size:21
Alignment explanation
Indices: 21937--22002 Score: 62
Period size: 22 Copynumber: 3.0 Consensus size: 21
21927 AAATCATTAG
*
21937 TTTTATATTTATT-ATAAATT
1 TTTTAAATTTATTAATAAATT
*
21957 TATTTAAATTTTTTAATAAATT
1 T-TTTAAATTTATTAATAAATT
**
21979 TTTTGAAATAAATTAATATAATT
1 TTTT-AAATTTATTAATA-AATT
22002 T
1 T
22003 AACTAGTCAA
Statistics
Matches: 37, Mismatches: 5, Indels: 5
0.79 0.11 0.11
Matches are distributed among these distances:
20 1 0.03
21 13 0.35
22 18 0.49
23 5 0.14
ACGTcount: A:0.41, C:0.00, G:0.02, T:0.58
Consensus pattern (21 bp):
TTTTAAATTTATTAATAAATT
Found at i:22285 original size:19 final size:19
Alignment explanation
Indices: 22261--22326 Score: 61
Period size: 19 Copynumber: 3.6 Consensus size: 19
22251 AATATTTAAA
*
22261 AAATTTAAATAA-AAATATT
1 AAATTTAAAAAATAAAT-TT
22280 AAATTTAAAAAATAAATTT
1 AAATTTAAAAAATAAATTT
22299 AAA--TAAAAAAGTAAAGTTT
1 AAATTTAAAAAA-TAAA-TTT
22318 --ATTTAAAAA
1 AAATTTAAAAA
22327 TATATCAGAT
Statistics
Matches: 41, Mismatches: 1, Indels: 10
0.79 0.02 0.19
Matches are distributed among these distances:
17 8 0.20
18 4 0.10
19 25 0.61
20 4 0.10
ACGTcount: A:0.64, C:0.00, G:0.03, T:0.33
Consensus pattern (19 bp):
AAATTTAAAAAATAAATTT
Found at i:22406 original size:24 final size:24
Alignment explanation
Indices: 22378--22437 Score: 72
Period size: 21 Copynumber: 2.5 Consensus size: 24
22368 TTCAACTTAT
*
22378 TTTTAATTATATAATATATATT-AG
1 TTTT-ATTATATAATATATATTAAA
22402 TTTTA-TATAT-ATATATATTAAA
1 TTTTATTATATAATATATATTAAA
22424 TTTTTATTATATAA
1 -TTTTATTATATAA
22438 AGAATAAATA
Statistics
Matches: 31, Mismatches: 1, Indels: 7
0.79 0.03 0.18
Matches are distributed among these distances:
21 9 0.29
22 6 0.19
23 6 0.19
24 9 0.29
25 1 0.03
ACGTcount: A:0.42, C:0.00, G:0.02, T:0.57
Consensus pattern (24 bp):
TTTTATTATATAATATATATTAAA
Found at i:22445 original size:22 final size:23
Alignment explanation
Indices: 22402--22446 Score: 56
Period size: 22 Copynumber: 2.0 Consensus size: 23
22392 TATATATTAG
* * *
22402 TTTTATATATATATATATTAAAT
1 TTTTATATATATAAAGAATAAAT
22425 TTTTAT-TATATAAAGAATAAAT
1 TTTTATATATATAAAGAATAAAT
22447 ATATTATAAA
Statistics
Matches: 19, Mismatches: 3, Indels: 1
0.83 0.13 0.04
Matches are distributed among these distances:
22 13 0.68
23 6 0.32
ACGTcount: A:0.47, C:0.00, G:0.02, T:0.51
Consensus pattern (23 bp):
TTTTATATATATAAAGAATAAAT
Found at i:22454 original size:18 final size:18
Alignment explanation
Indices: 22433--22468 Score: 63
Period size: 18 Copynumber: 2.0 Consensus size: 18
22423 ATTTTTATTA
22433 TATAAAGAATAAATATAT
1 TATAAAGAATAAATATAT
*
22451 TATAAAGATTAAATATAT
1 TATAAAGAATAAATATAT
22469 AAAATGTTAT
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
18 17 1.00
ACGTcount: A:0.58, C:0.00, G:0.06, T:0.36
Consensus pattern (18 bp):
TATAAAGAATAAATATAT
Found at i:23221 original size:51 final size:51
Alignment explanation
Indices: 23164--23271 Score: 207
Period size: 51 Copynumber: 2.1 Consensus size: 51
23154 TCTGAAATTT
*
23164 TTAATAATTTGAAATCATAATATATTCATAAATTTATTTATTTAGAATGTA
1 TTAATAATTTGAAATCATAATATATCCATAAATTTATTTATTTAGAATGTA
23215 TTAATAATTTGAAATCATAATATATCCATAAATTTATTTATTTAGAATGTA
1 TTAATAATTTGAAATCATAATATATCCATAAATTTATTTATTTAGAATGTA
23266 TTAATA
1 TTAATA
23272 CTTATTTGAA
Statistics
Matches: 56, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
51 56 1.00
ACGTcount: A:0.44, C:0.05, G:0.06, T:0.46
Consensus pattern (51 bp):
TTAATAATTTGAAATCATAATATATCCATAAATTTATTTATTTAGAATGTA
Found at i:23793 original size:18 final size:17
Alignment explanation
Indices: 23738--23792 Score: 56
Period size: 18 Copynumber: 3.1 Consensus size: 17
23728 GATCTTTTTG
*
23738 AACTTAAAAAAAATAGTA
1 AACTTAAAAAAAA-AGAA
***
23756 AACTTAAAAGAAACCCAA
1 AACTTAAAA-AAAAAGAA
23774 AACTTAAAAAAAAAGAA
1 AACTTAAAAAAAAAGAA
23791 AA
1 AA
23793 AAAAGAAAAA
Statistics
Matches: 29, Mismatches: 7, Indels: 3
0.74 0.18 0.08
Matches are distributed among these distances:
17 7 0.24
18 19 0.66
19 3 0.10
ACGTcount: A:0.69, C:0.11, G:0.05, T:0.15
Consensus pattern (17 bp):
AACTTAAAAAAAAAGAA
Found at i:24135 original size:2 final size:2
Alignment explanation
Indices: 24128--24154 Score: 54
Period size: 2 Copynumber: 13.5 Consensus size: 2
24118 TCACTTAAGC
24128 CT CT CT CT CT CT CT CT CT CT CT CT CT C
1 CT CT CT CT CT CT CT CT CT CT CT CT CT C
24155 CTTTGTCTCT
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 25 1.00
ACGTcount: A:0.00, C:0.52, G:0.00, T:0.48
Consensus pattern (2 bp):
CT
Found at i:24839 original size:9 final size:9
Alignment explanation
Indices: 24827--24887 Score: 52
Period size: 9 Copynumber: 6.7 Consensus size: 9
24817 TTTTTTATTT
24827 AAAATATAA
1 AAAATATAA
24836 AAAATAATAA
1 AAAAT-ATAA
24846 AATAAT-TAA
1 AA-AATATAA
*
24855 AAAATAGAA
1 AAAATATAA
* *
24864 AAATTTTAA
1 AAAATATAA
* *
24873 AAATTAAAA
1 AAAATATAA
24882 AAAATA
1 AAAATA
24888 ATATAAATTA
Statistics
Matches: 42, Mismatches: 7, Indels: 6
0.76 0.13 0.11
Matches are distributed among these distances:
8 3 0.07
9 30 0.71
10 6 0.14
11 3 0.07
ACGTcount: A:0.74, C:0.00, G:0.02, T:0.25
Consensus pattern (9 bp):
AAAATATAA
Found at i:24866 original size:19 final size:18
Alignment explanation
Indices: 24833--24883 Score: 59
Period size: 19 Copynumber: 2.8 Consensus size: 18
24823 ATTTAAAATA
24833 TAAAAAATAATAAAATAAT
1 TAAAAAATAA-AAAATAAT
*
24852 TAAAAAATAGAAAAAT-TT
1 TAAAAAATA-AAAAATAAT
*
24870 TAAAAATTAAAAAA
1 TAAAAAATAAAAAA
24884 AATAATATAA
Statistics
Matches: 29, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
17 5 0.17
18 9 0.31
19 14 0.48
20 1 0.03
ACGTcount: A:0.73, C:0.00, G:0.02, T:0.25
Consensus pattern (18 bp):
TAAAAAATAAAAAATAAT
Found at i:25492 original size:3 final size:3
Alignment explanation
Indices: 25484--25518 Score: 70
Period size: 3 Copynumber: 11.7 Consensus size: 3
25474 TCAAGTAAAA
25484 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TA
1 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TA
25519 AAATATTTAA
Statistics
Matches: 32, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 32 1.00
ACGTcount: A:0.34, C:0.00, G:0.00, T:0.66
Consensus pattern (3 bp):
TAT
Found at i:26127 original size:14 final size:16
Alignment explanation
Indices: 26110--26163 Score: 51
Period size: 16 Copynumber: 3.6 Consensus size: 16
26100 TAATATTTAA
*
26110 ATTTTCATATAA-T-T
1 ATTTTAATATAAGTAT
* *
26124 ATTTTGATAAAAGTAT
1 ATTTTAATATAAGTAT
*
26140 ATTTTAATATAAGAAT
1 ATTTTAATATAAGTAT
26156 A-TTTAATA
1 ATTTTAATA
26164 ATTAATAATT
Statistics
Matches: 33, Mismatches: 5, Indels: 3
0.80 0.12 0.07
Matches are distributed among these distances:
14 10 0.30
15 8 0.24
16 15 0.45
ACGTcount: A:0.44, C:0.02, G:0.06, T:0.48
Consensus pattern (16 bp):
ATTTTAATATAAGTAT
Found at i:26696 original size:21 final size:20
Alignment explanation
Indices: 26672--26710 Score: 51
Period size: 21 Copynumber: 1.9 Consensus size: 20
26662 TAATAAATAC
*
26672 AAAAATAATATATTTAAAAAT
1 AAAAATAAAATA-TTAAAAAT
*
26693 AAAAGTAAAATATTAAAA
1 AAAAATAAAATATTAAAA
26711 TTATATATTT
Statistics
Matches: 16, Mismatches: 2, Indels: 1
0.84 0.11 0.05
Matches are distributed among these distances:
20 6 0.38
21 10 0.62
ACGTcount: A:0.69, C:0.00, G:0.03, T:0.28
Consensus pattern (20 bp):
AAAAATAAAATATTAAAAAT
Found at i:26745 original size:24 final size:25
Alignment explanation
Indices: 26713--26780 Score: 72
Period size: 24 Copynumber: 2.8 Consensus size: 25
26703 TATTAAAATT
26713 ATATATTTAATATATTTATTA-TAA
1 ATATATTTAATATATTTATTATTAA
26737 ATATATTTAA-A-ATTTAAATTATTAA
1 ATATATTTAATATATTT--ATTATTAA
**
26762 ATA-ATTTTTTATATTTATT
1 ATATATTTAATATATTTATT
26781 TGTCATAATT
Statistics
Matches: 37, Mismatches: 2, Indels: 10
0.76 0.04 0.20
Matches are distributed among these distances:
22 4 0.11
23 1 0.03
24 21 0.57
25 7 0.19
26 4 0.11
ACGTcount: A:0.44, C:0.00, G:0.00, T:0.56
Consensus pattern (25 bp):
ATATATTTAATATATTTATTATTAA
Found at i:28044 original size:49 final size:49
Alignment explanation
Indices: 27967--28066 Score: 173
Period size: 49 Copynumber: 2.0 Consensus size: 49
27957 CTTCACCGCC
* *
27967 TATCTTTTATTTATTTAAATACCCTTTCTTTCAAATGACTACGCCCCTT
1 TATCTTTTATTTATTTAAATACCATTTCTTTCAAATGACAACGCCCCTT
*
28016 TATCTTTTATTTATTTAAATACCATTTCTTTCAAATTACAACGCCCCTT
1 TATCTTTTATTTATTTAAATACCATTTCTTTCAAATGACAACGCCCCTT
28065 TA
1 TA
28067 GCAGCAGATG
Statistics
Matches: 48, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
49 48 1.00
ACGTcount: A:0.27, C:0.23, G:0.03, T:0.47
Consensus pattern (49 bp):
TATCTTTTATTTATTTAAATACCATTTCTTTCAAATGACAACGCCCCTT
Found at i:30875 original size:2 final size:2
Alignment explanation
Indices: 30857--30910 Score: 81
Period size: 2 Copynumber: 27.0 Consensus size: 2
30847 GAACGTGGTT
* * *
30857 TA TA TA CA TA TA AA TA TA TA TA TA TA TA CA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
30899 TA TA TA TA TA TA
1 TA TA TA TA TA TA
30911 AAACTCAGAG
Statistics
Matches: 46, Mismatches: 6, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
2 46 1.00
ACGTcount: A:0.52, C:0.04, G:0.00, T:0.44
Consensus pattern (2 bp):
TA
Done.