Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2394
Parameters: 2 7 7 80 10 50 1000
Length:  32570

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2534
505
5.0
508
90
3
4043
27
19
24
28
1.99
3646--4081
27
15.9
27
84
3
498
23
31
14
30
1.94
4062--5405
32
44.8
32
81
7
1039
31
30
17
20
1.96
4057--5335
124
10.7
123
82
7
1169
31
30
17
20
1.96
5471--5649
48
3.7
48
93
0
286
19
27
18
34
1.95
7292--7330
20
2.1
19
85
9
53
23
10
10
56
1.63
8584--8670
36
2.6
34
79
13
108
32
22
14
29
1.94
10993--11139
41
3.7
40
73
7
136
21
20
12
44
1.85
11257--11355
41
2.4
41
86
3
137
22
26
13
38
1.90
11422--11588
40
4.2
40
74
14
137
20
22
10
45
1.82
11491--11680
40
4.8
40
74
5
134
20
22
12
44
1.85
11424--11680
120
2.1
120
80
7
272
20
23
12
44
1.84
11829--12008
92
2.0
90
94
2
315
31
17
15
35
1.92
15353--15489
20
6.8
20
67
25
74
27
16
15
40
1.89
17887--18263
79
4.8
79
83
4
476
28
24
14
32
1.94
22678--22731
20
2.7
20
100
0
108
22
14
14
48
1.81
25051--25392
52
6.5
53
69
20
182
29
26
12
32
1.92
25168--25237
27
2.6
27
86
2
86
25
32
20
21
1.97
25056--25393
104
3.2
103
70
13
292
29
26
12
31
1.93
25376--25447
28
2.6
28
86
0
90
25
30
19
25
1.98
25054--25447
212
1.9
212
89
3
614
28
26
13
31
1.94

Tables:   1

The End!