Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2396
Parameters: 2 7 7 80 10 50 1000
Length:  25790

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
399--472
20
3.8
20
80
5
80
39
12
13
35
1.82
396--472
39
2.0
39
87
5
111
38
12
12
35
1.82
7300--7347
13
3.8
13
77
5
53
43
2
4
50
1.33
7248--7321
30
2.5
29
71
16
71
50
6
4
39
1.48
7850--7920
2
35.5
2
82
0
61
45
7
4
43
1.50
7844--7892
16
3.1
16
84
0
62
46
10
6
36
1.63
7864--7919
24
2.3
24
84
0
76
42
5
5
46
1.49
7864--7917
22
2.5
22
84
0
72
42
5
5
46
1.50
9713--9754
20
2.1
20
86
0
57
40
19
2
38
1.64
10012--10070
16
3.9
15
69
20
50
37
1
0
61
1.07
10667--10808
42
3.4
41
77
16
130
45
3
2
47
1.34
10703--10816
42
2.7
41
80
9
131
45
0
4
49
1.28
11281--11319
20
1.9
20
84
5
51
17
15
2
64
1.41
11735--11783
24
2.0
24
92
0
80
34
16
10
38
1.82
11742--11796
23
2.3
24
87
3
76
34
18
10
36
1.86
12633--12683
26
2.0
26
84
7
68
49
1
0
49
1.12
12976--13007
2
16.0
2
93
0
55
46
0
0
53
1.00
13435--13570
12
11.5
12
68
21
65
46
1
2
49
1.26
13458--13495
15
2.8
14
84
15
53
42
0
5
52
1.24
20502--20539
15
2.5
15
87
8
51
18
0
7
73
1.06
22303--22339
17
2.1
19
90
10
60
51
0
0
48
1.00
22576--22641
31
2.2
29
86
5
87
65
0
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24331--24373
15
2.8
16
86
13
63
37
0
0
62
0.95

Tables:   1

The End!