Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2398
Parameters: 2 7 7 80 10 50 1000
Length:  33670

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2176--2217
13
3.2
13
89
0
66
40
16
14
28
1.88
2550--2574
13
1.9
13
100
0
50
36
16
16
32
1.90
2530--2595
32
2.0
33
94
2
116
34
12
16
36
1.86
2636--2660
13
1.9
13
100
0
50
32
16
16
36
1.90
2669--2797
52
2.5
52
97
0
240
34
17
18
28
1.94
8474--8499
13
2.0
13
100
0
52
30
15
15
38
1.88
8454--8517
32
2.0
33
87
3
94
28
15
17
39
1.90
11044--11082
13
3.0
13
100
0
78
38
15
15
30
1.88
14511--14548
18
2.1
18
85
9
51
55
0
0
44
0.99
14517--14574
20
3.0
19
82
7
64
50
1
0
48
1.11
15878--16310
165
2.6
164
78
5
408
32
9
7
51
1.62
16949--17000
9
5.6
9
76
15
52
80
0
19
0
0.71
16949--16980
14
2.4
14
94
5
57
81
0
18
0
0.70
16957--17000
20
2.1
21
91
4
72
81
0
18
0
0.68
17806--17842
17
2.2
17
90
9
58
81
0
0
18
0.70
17856--18114
142
1.8
143
80
7
321
34
11
10
43
1.75
18943--18968
13
2.0
13
100
0
52
76
0
7
15
0.99
18979--19035
21
2.7
21
97
0
105
33
10
19
36
1.86
19091--19158
19
3.9
19
78
21
85
35
11
14
38
1.83
19112--19136
13
1.9
13
100
0
50
36
16
16
32
1.90
19093--19155
32
2.0
32
96
0
117
34
12
15
36
1.86
19198--19223
13
2.0
13
100
0
52
30
15
15
38
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19178--19244
33
2.0
33
88
0
98
25
14
16
43
1.86
21738--21908
51
3.3
51
79
4
198
29
26
11
32
1.92
21891--21972
28
2.9
28
82
7
96
24
31
17
26
1.97

Tables:   1

The End!