Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2401
Parameters: 2 7 7 80 10 50 1000
Length:  18478

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2929--2967
21
2.0
20
85
14
55
56
2
5
35
1.35
3434--3463
2
15.0
2
100
0
60
0
50
0
50
1.00
3711--3747
14
2.7
14
80
19
51
62
0
0
37
0.96
3712--3749
15
2.5
15
87
8
51
63
0
0
36
0.95
4464--4527
21
3.2
19
78
18
76
56
0
0
43
0.99
4466--4552
21
4.1
23
70
19
73
54
0
1
44
1.07
4462--4555
42
2.3
42
89
7
140
53
0
1
45
1.07
4491--4556
18
3.6
17
72
25
55
50
0
1
48
1.10
5910--5949
21
1.9
21
85
10
55
52
2
2
42
1.28
5923--5989
25
2.7
25
77
11
75
56
7
0
35
1.27
6296--6335
20
2.1
18
90
9
62
27
0
0
72
0.85
6299--6342
20
2.3
18
81
14
52
31
0
0
68
0.90
6331--6382
12
3.7
15
71
23
51
53
1
0
44
1.11
6317--6374
26
2.2
25
80
14
64
46
1
0
51
1.11
6724--6755
11
2.8
11
95
4
55
40
0
0
59
0.97
7802--7827
2
13.0
2
100
0
52
50
0
0
50
1.00
8155--8575
209
2.0
209
96
0
779
27
14
21
36
1.93

Tables:   1

The End!