Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2402
Parameters: 2 7 7 80 10 50 1000
Length:  35835

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2030--2062
2
16.5
2
100
0
66
0
48
0
51
1.00
6062--6118
2
28.5
2
86
13
82
47
3
0
49
1.18
6062--6113
22
2.4
22
100
0
104
46
3
0
50
1.20
9652--9695
20
2.2
20
91
0
70
50
4
0
45
1.22
13473--13511
12
3.0
13
85
11
53
41
0
0
58
0.98
13477--13517
14
3.1
14
82
10
50
41
0
0
58
0.98
13494--13537
23
1.9
23
90
0
70
47
0
0
52
1.00
13476--13537
23
2.6
24
77
12
65
43
0
0
56
0.99
13773--13804
2
16.0
2
100
0
64
0
50
0
50
1.00
14704--14754
19
2.6
19
81
6
57
52
1
0
45
1.12
14765--14852
38
2.2
40
82
11
110
47
0
0
52
1.00
14822--14866
24
2.0
23
87
12
67
66
0
0
33
0.92
15295--15325
3
10.3
3
92
0
53
0
0
29
70
0.87
15922--17034
366
3.0
366
82
7
1234
40
9
16
33
1.80
20118--20150
3
11.0
3
100
0
66
33
0
0
66
0.92
20661--20685
3
8.3
3
100
0
50
68
0
0
32
0.90
22540--22604
26
2.5
26
83
14
80
56
0
3
40
1.15
22562--22600
20
2.0
20
90
10
62
56
0
2
41
1.13
22843--22873
2
15.5
2
100
0
62
48
0
51
0
1.00
26062--26123
26
2.3
27
83
8
74
54
1
3
40
1.26
26254--26298
22
2.0
22
86
4
63
44
0
0
55
0.99
26263--26318
29
1.9
29
92
0
94
41
1
0
57
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26340--26370
16
1.9
16
100
0
62
61
0
0
38
0.96
29611--29654
5
8.2
5
85
14
61
59
0
0
40
0.98
29611--29653
12
3.8
12
85
14
65
58
0
0
41
0.98
29622--29654
17
1.9
17
100
0
66
60
0
0
39
0.97
30519--30573
28
2.0
28
86
13
78
56
0
0
43
0.99

Tables:   1

The End!