Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2408
Parameters: 2 7 7 80 10 50 1000
Length:  26953

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3185--3211
3
9.0
3
100
0
54
33
0
0
66
0.92
7351--7380
8
3.9
8
95
4
53
26
10
10
53
1.66
14631--14661
13
2.4
13
94
0
53
38
9
16
35
1.81
14609--14677
33
2.1
33
89
5
104
39
15
11
33
1.84
14727--14766
12
3.2
12
79
6
53
55
15
7
22
1.65
14719--14766
25
1.9
25
100
0
96
52
14
8
25
1.69
14719--14758
13
3.2
13
78
7
55
52
15
7
25
1.68
14717--14777
25
2.8
21
81
16
70
49
14
9
26
1.75
21892--22105
112
1.9
114
85
9
298
50
2
7
40
1.42
22514--22656
48
3.0
47
84
6
180
39
4
23
32
1.74
23475--23504
3
10.0
3
100
0
60
33
0
0
66
0.92

Tables:   1

The End!